Frontiers in Neuroinformatics

Article	Citations
Automatic Diagnosis of Schizophrenia in EEG Signals Using CNN-LSTM Models	81
A Systemic Review of Available Low-Cost EEG Headsets Used for Drowsiness Detection	78
A Machine Learning Approach for the Differential Diagnosis of Alzheimer and Vascular Dementia Fed by MRI Selected Features	65
Clinica: An Open-Source Software Platform for Reproducible Clinical Neuroscience Studies	55
Review of Deep Learning Approaches for the Segmentation of Multiple Sclerosis Lesions on Brain MRI	50
SARA-GAN: Self-Attention and Relative Average Discriminator Based Generative Adversarial Networks for Fast Compressed Sensing MRI Reconstruction	47
Machine Learning Methods for Diagnosing Autism Spectrum Disorder and Attention- Deficit/Hyperactivity Disorder Using Functional and Structural MRI: A Survey	41
X-Vectors: New Quantitative Biomarkers for Early Parkinson's Disease Detection From Speech	33
Nutil: A Pre- and Post-processing Toolbox for Histological Rodent Brain Section Images	29
EEG Signal Reconstruction Using a Generative Adversarial Network With Wasserstein Distance and Temporal-Spatial-Frequency Loss	29
CoMB-Deep: Composite Deep Learning-Based Pipeline for Classifying Childhood Medulloblastoma and Its Classes	28
Finite Element Simulation of Ionic Electrodiffusion in Cellular Geometries	26
PyGeNN: A Python Library for GPU-Enhanced Neural Networks	26
neuPrint: An open access tool for EM connectomics	26
Half-UNet: A Simplified U-Net Architecture for Medical Image Segmentation	24
DarkASDNet: Classification of ASD on Functional MRI Using Deep Neural Network	24
Robust Monte-Carlo Simulations in Diffusion-MRI: Effect of the Substrate Complexity and Parameter Choice on the Reproducibility of Results	24
Simulation of a Human-Scale Cerebellar Network Model on the K Computer	22
Bridging Scales in Alzheimer's Disease: Biological Framework for Brain Simulation With The Virtual Brain	20
NeuroRA: A Python Toolbox of Representational Analysis From Multi-Modal Neural Data	20
Automated Hierarchy Evaluation System of Large Vessel Occlusion in Acute Ischemia Stroke	20
3D Segmentation of Perivascular Spaces on T1-Weighted 3 Tesla MR Images With a Convolutional Autoencoder and a U-Shaped Neural Network	19
Deep Learning in Large and Multi-Site Structural Brain MR Imaging Datasets	19
Medical Image Interpolation Using Recurrent Type-2 Fuzzy Neural Network	18
An Evaluation of the EEG Alpha-to-Theta and Theta-to-Alpha Band Ratios as Indexes of Mental Workload	18

Beware (Surprisingly Common) Left-Right Flips in Your MRI Data: An Efficient and Robust Method to Check MRI Dataset Consistency Using AFNI	18
Machine learning for autism spectrum disorder diagnosis using structural magnetic resonance imaging: Promising but challenging	17
TReC: Transferred ResNet and CBAM for Detecting Brain Diseases	17
A Toolbox and Crowdsourcing Platform for Automatic Labeling of Independent Components in Electroencephalography	16
Modernizing the NEURON Simulator for Sustainability, Portability, and Performance	16
THINGSvision: A Python Toolbox for Streamlining the Extraction of Activations From Deep Neural Networks	16
BIDScoin: A User-Friendly Application to Convert Source Data to Brain Imaging Data Structure	15
A Systematic Approach for Explaining Time and Frequency Features Extracted by Convolutional Neural Networks From Raw Electroencephalography Data	15
Semi-Supervised Learning in Medical Images Through Graph-Embedded Random Forest	14
DR-IIXRN : Detection Algorithm of Diabetic Retinopathy Based on Deep Ensemble Learning and Attention Mechanism	14
FN-OCT: Disease Detection Algorithm for Retinal Optical Coherence Tomography Based on a Fusion Network	14
Sammba-MRI: A Library for Processing SmAll-MaMmal BrAin MRI Data in Python	13
Multi-Scale Graph Representation Learning for Autism Identification With Functional MRI	13
Integrative Base Ontology for the Research Analysis of Alzheimer’s Disease-Related Mild Cognitive Impairment	13
Comparison of Resampling Techniques for Imbalanced Datasets in Machine Learning: Application to Epileptogenic Zone Localization From Interictal Intracranial EEG Recordings in Patients With Focal Epile	13
A Smart Region-Growing Algorithm for Single-Neuron Segmentation From Confocal and 2-Photon Datasets	13
QDECR: A Flexible, Extensible Vertex-Wise Analysis Framework in R	12
Classification of Schizophrenia by Functional Connectivity Strength Using Functional Near Infrared Spectroscopy	12
Multi-Dimensional Enhanced Seizure Prediction Framework Based on Graph Convolutional Network	12
Predicting Body Mass Index From Structural MRI Brain Images Using a Deep Convolutional Neural Network	12
Large-scale biophysically detailed model of somatosensory thalamocortical circuits in NetPyNE	12
Primary Categorizing and Masking Cerebral Small Vessel Disease Based on “Deep Learning System”	12
A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source Spectra	12
A Validation of Supervised Deep Learning for Gait Analysis in the Cat	12
Development of a Non-invasive Deep Brain Stimulator With Precise Positioning and Real-Time Monitoring of Bioimpedance	11
A Multicenter Preclinical MRI Study: Definition of Rat Brain Relaxometry Reference Maps	11
A Quick and Easy Way to Estimate Entropy and Mutual Information for Neuroscience	11
Scale-free and oscillatory spectral measures of sleep stages in humans	11
Feature Selection Techniques for a Machine Learning Model to Detect Autonomic Dysreflexia	10
The Brain Observatory Storage Service and Database (BossDB): A Cloud-Native Approach for Petascale Neuroscience Discovery	10
Comparative Study of Multi-Delay Pseudo-Continuous Arterial Spin Labeling Perfusion MRI and CT Perfusion in Ischemic Stroke Disease	10
QuNex—An integrative platform for reproducible neuroimaging analytics	9
vol2Brain: A New Online Pipeline for Whole Brain MRI Analysis	9
Sparse Logistic Regression With L1/2 Penalty for Emotion Recognition in Electroencephalography Classification	9
Comparing the Electrophysiology and Morphology of Human and Mouse Layer 2/3 Pyramidal Neurons With Bayesian Networks	8
SparNet: A Convolutional Neural Network for EEG Space-Frequency Feature Learning and Depression Discrimination	8
Bioinformatic Analysis of the Proteome in Exosomes Derived From Plasma: Exosomes Involved in Cholesterol Metabolism Process of Patients With Spinal Cord Injury in the Acute Phase	8
Prediction model for suicide based on back propagation neural network and multilayer perceptron	8
Editorial: Reproducibility and Rigour in Computational Neuroscience	8
Deploying and Optimizing Embodied Simulations of Large-Scale Spiking Neural Networks on HPC Infrastructure	8
The Stroke Neuro-Imaging Phenotype Repository: An Open Data Science Platform for Stroke Research	8
Constructing Brain Connectivity Model Using Causal Network Reconstruction Approach	8
2.5D and 3D segmentation of brain metastases with deep learning on multinational MRI data	8
From Coarse to Fine-Grained Parcellation of the Cortical Surface Using a Fiber-Bundle Atlas	8
Novel methods for elucidating modality importance in multimodal electrophysiology classifiers	8
Brian2CUDA: Flexible and Efficient Simulation of Spiking Neural Network Models on GPUs	8
Novel Hybrid Brain-Computer Interface for Virtual Reality Applications Using Steady-State Visual-Evoked Potential-Based Brain–Computer Interface and Electrooculogram-Based Eye Tracking for Increased I	8
An Automated Approach for the Detection of Alzheimer's Disease From Resting State Electroencephalography	8
Multimodal Ensemble Deep Learning to Predict Disruptive Behavior Disorders in Children	8
Routing Brain Traffic Through the Von Neumann Bottleneck: Parallel Sorting and Refactoring	7

Advances in Astrocyte Computational Models: From Metabolic Reconstructions to Multi-omic Approaches	7
Deep Neuro-Vision Embedded Architecture for Safety Assessment in Perceptive Advanced Driver Assistance Systems: The Pedestrian Tracking System Use-Case	7
Supervised Learning With Perceptual Similarity for Multimodal Gene Expression Registration of a Mouse Brain Atlas	7
Fast Simulation of a Multi-Area Spiking Network Model of Macaque Cortex on an MPI-GPU Cluster	7
Small Animal Shanoir (SAS) A Cloud-Based Solution for Managing Preclinical MR Brain Imaging Studies	7
Fiber Clustering Acceleration With a Modified Kmeans++ Algorithm Using Data Parallelism	7
Statistical Analysis of Graph-Theoretic Indices to Study EEG-TMS Connectivity in Patients With Depression	7
Advancing Prediction of Risk of Intraoperative Massive Blood Transfusion in Liver Transplantation With Machine Learning Models. A Multicenter Retrospective Study	7
On the Minimal Amount of EEG Data Required for Learning Distinctive Human Features for Task-Dependent Biometric Applications	7
Efficient Communication in Distributed Simulations of Spiking Neuronal Networks With Gap Junctions	7
Knowledge Representation for Multi-Scale Physiology Route Modeling	7
FlywheelTools: Data Curation and Manipulation on the Flywheel Platform	6
Identifying Boys With Autism Spectrum Disorder Based on Whole-Brain Resting-State Interregional Functional Connections Using a Boruta-Based Support Vector Machine Approach	6
Multi-threshold image segmentation for melanoma based on Kapur’s entropy using enhanced ant colony optimization	6
Effects of Visual Attentional Load on the Tactile Sensory Memory Indexed by Somatosensory Mismatch Negativity	6
Time-Frequency Representations of Brain Oscillations: Which One Is Better?	6
OPETH: Open Source Solution for Real-Time Peri-Event Time Histogram Based on Open Ephys	6
A Spelling Paradigm With an Added Red Dot Improved the P300 Speller System Performance	6
Self-Regulation in the Time of Lockdown	6
Browsing Multiple Subjects When the Atlas Adaptation Cannot Be Achieved via a Warping Strategy	6
A Multi-Scale Computational Model of Excitotoxic Loss of Dopaminergic Cells in Parkinson's Disease	6
Regional Brain Fusion: Graph Convolutional Network for Alzheimer's Disease Prediction and Analysis	6
Studying the Factors of Human Carotid Atherosclerotic Plaque Rupture, by Calculating Stress/Strain in the Plaque, Based on CEUS Images: A Numerical Study	6
Extended Invariant Information Clustering Is Effective for Leave-One-Site-Out Cross-Validation in Resting State Functional Connectivity Modeling	6
A Modular Workflow for Performance Benchmarking of Neuronal Network Simulations	6
A Tensor-Based Framework for rs-fMRI Classification and Functional Connectivity Construction	5
Microglial morphometric analysis: so many options, so little consistency	5
Modeling Neurodegeneration in silico With Deep Learning	5
Embedding Functional Brain Networks in Low Dimensional Spaces Using Manifold Learning Techniques	5
MP3: Medical Software for Processing Multi-Parametric Images Pipelines	5
Providing Evidence for the Null Hypothesis in Functional Magnetic Resonance Imaging Using Group-Level Bayesian Inference	5
An RBF neural network based on improved black widow optimization algorithm for classification and regression problems	5
Temporal and spatial dynamic propagation of electroencephalogram by combining power spectral and synchronization in childhood absence epilepsy	5
Machine Learning Techniques for the Diagnosis of Schizophrenia Based on Event-Related Potentials	5
NICA: A Novel Toolbox for Near-Infrared Spectroscopy Calculations and Analyses	5
Evaluation of Task fMRI Decoding With Deep Learning on a Small Sample Dataset	5
Can We Push the “Quasi-Perfect Artifact Rejection” Even Closer to Perfection?	5
LLRHNet: Multiple Lesions Segmentation Using Local-Long Range Features	5
Automated Detection of Candidate Subjects With Cerebral Microbleeds Using Machine Learning	5
From End to End: Gaining, Sorting, and Employing High-Density Neural Single Unit Recordings	5
Comparison of CNN-Learned vs. Handcrafted Features for Detection of Parkinson's Disease Dysgraphia in a Multilingual Dataset	5
A neuroscientist’s guide to using murine brain atlases for efficient analysis and transparent reporting	5
JUN and PDGFRA as Crucial Candidate Genes for Childhood Autism Spectrum Disorder	5
A Hybrid Deep Learning Method for Early and Late Mild Cognitive Impairment Diagnosis With Incomplete Multimodal Data	5
Alternation of Resting-State Functional Connectivity Between Visual Cortex and Hypothalamus in Guinea Pigs With Experimental Glucocorticoid Enhanced Myopia After the Treatment of Electroacupuncture	5
Experimental Pipeline (Expipe): A Lightweight Data Management Platform to Simplify the Steps From Experiment to Data Analysis	5
Age-Specific Adult Rat Brain MRI Templates and Tissue Probability Maps	5
Brian2Loihi: An emulator for the neuromorphic chip Loihi using the spiking neural network simulator Brian	5
PyMVPD: A Toolbox for Multivariate Pattern Dependence	4
MonkeyCBP: A Toolbox for Connectivity-Based Parcellation of Monkey Brain	4
Multi-Source Domain Adaptation Techniques for Mitigating Batch Effects: A Comparative Study	4
Efficient Simulation of 3D Reaction-Diffusion in Models of Neurons and Networks	4
A standardized accelerometry method for characterizing tremor: Application and validation in an ageing population with postural and action tremor	4
Pycabnn: Efficient and Extensible Software to Construct an Anatomical Basis for a Physiologically Realistic Neural Network Model	4
An EEG study of human trust in autonomous vehicles based on graphic theoretical analysis	4
Neural network system for analyzing statistical factors of patients for predicting the survival of dental implants	4
Influence of the Number of Channels and Classification Algorithm on the Performance Robustness to Electrode Shift in Steady-State Visual Evoked Potential-Based Brain-Computer Interfaces	4
The EBRAINS NeuroFeatureExtract: An Online Resource for the Extraction of Neural Activity Features From Electrophysiological Data	4
Deciphering the Morphology of Motor Evoked Potentials	4
MIIND : A Model-Agnostic Simulator of Neural Populations	4
A Robust Modular Automated Neuroimaging Pipeline for Model Inputs to TheVirtualBrain	4
Validation of Affect-tag Affective and Cognitive Indicators	4
Classification of Electrophysiological Signatures With Explainable Artificial Intelligence: The Case of Alarm Detection in Flight Simulator	4
NIRS-ICA: A MATLAB Toolbox for Independent Component Analysis Applied in fNIRS Studies	4
Tracking axon initial segment plasticity using high-density microelectrode arrays: A computational study	4
Viability Study of Machine Learning-Based Prediction of COVID-19 Pandemic Impact in Obsessive-Compulsive Disorder Patients	4
Interpretable evaluation for the Brunnstrom recovery stage of the lower limb based on wearable sensors	4
A systematic comparison of deep learning methods for EEG time series analysis	3
Intradialytic hypotension prediction using covariance matrix-driven whale optimizer with orthogonal structure-assisted extreme learning machine	3
Non-invasive Evaluation of Brain Death Caused by Traumatic Brain Injury by Ultrasound Imaging	3
Whom to Believe? Understanding and Modeling Brain Activity in Source Credibility Evaluation	3
A review: Music-emotion recognition and analysis based on EEG signals	3
The role of wrist-worn technology in the management of Parkinson’s disease in daily life: A narrative review	3
Fitting Splines to Axonal Arbors Quantifies Relationship Between Branch Order and Geometry	3
bSRWPSO-FKNN: A boosted PSO with fuzzy K-nearest neighbor classifier for predicting atopic dermatitis disease	3
Research on Voxel-Based Features Detection and Analysis of Alzheimer’s Disease Using Random Survey Support Vector Machine	3
Parameter Estimation of Two Spiking Neuron Models With Meta-Heuristic Optimization Algorithms	3
Detection of pulmonary embolism severity using clinical characteristics, hematological indices, and machine learning techniques	3
Mapping and Validating a Point Neuron Model on Intel's Neuromorphic Hardware Loihi	3
Multi illumination color constancy based on multi-scale supervision and single-scale estimation cascade convolution neural network	3

NoLiTiA: An Open-Source Toolbox for Non-linear Time Series Analysis	3
A data-driven approach to clinical decision support in tinnitus retraining therapy	3
Estimation of Emotional Arousal Changes of a Group of Individuals During Movie Screening Using Steady-State Visual-Evoked Potential	3
Decoding EEG rhythms offline and online during motor imagery for standing and sitting based on a brain-computer interface	3
The Involvement of Long Non-coding RNA and Messenger RNA Based Molecular Networks and Pathways in the Subacute Phase of Traumatic Brain Injury in Adult Mice	3
A Probabilistic Atlas of the Pineal Gland in the Standard Space	3
RealNeuralNetworks.jl: An Integrated Julia Package for Skeletonization, Morphological Analysis, and Synaptic Connectivity Analysis of Terabyte-Scale 3D Neural Segmentations	3
Polynomial, piecewise-Linear, Step (PLS): A Simple, Scalable, and Efficient Framework for Modeling Neurons	3
A deep learning approach with subregion partition in MRI image analysis for metastatic brain tumor	3
BOLD Monitoring in the Neural Simulator ANNarchy	3
NNMT: Mean-Field Based Analysis Tools for Neuronal Network Models	3
The EBRAINS Hodgkin-Huxley Neuron Builder: An online resource for building data-driven neuron models	3
On the Use of a Multimodal Optimizer for Fitting Neuron Models. Application to the Cerebellar Granule Cell	3
Electrical Source Imaging in Freely Moving Rats: Evaluation of a 12-Electrode Cortical Electroencephalography System	3
Disrupted Rich Club Organization of Hemispheric White Matter Networks in Bipolar Disorder	3
Riemannian Geometry of Functional Connectivity Matrices for Multi-Site Attention-Deficit/Hyperactivity Disorder Data Harmonization	3
Accurate segmentation of neonatal brain MRI with deep learning	3
Local Label Point Correction for Edge Detection of Overlapping Cervical Cells	3
Adaptive Multimodal Neuroimage Integration for Major Depression Disorder Detection	3
Non-parametric MRI Brain Atlas for the Polish Population	3
Tuberculous pleural effusion prediction using ant colony optimizer with grade-based search assisted support vector machine	3
Validation and Diagnostic Performance of a CFD-Based Non-invasive Method for the Diagnosis of Aortic Coarctation	3
An enhanced ant colony optimizer with Cauchy-Gaussian fusion and novel movement strategy for multi-threshold COVID-19 X-ray image segmentation	3
Framework for the Classification of Emotions in People With Visual Disabilities Through Brain Signals	3
Analyzing Complex Problem Solving by Dynamic Brain Networks	2
BrainQuake: An Open-Source Python Toolbox for the Stereoelectroencephalography Spatiotemporal Analysis	2
Arpra: An Arbitrary Precision Range Analysis Library	2
Functional MRI study of feedback-based reinforcement learning in depression	2
An updated analysis of the association between CD2-associated protein gene rs9349407 polymorphism and Alzheimer’s disease in Chinese population	2
Creating Neuroscientific Knowledge Organization System Based on Word Representation and Agglomerative Clustering Algorithm	2
The Neuroscience Experiments System (NES)–A Software Tool to Manage Experimental Data and Its Provenance	2
An accessible and versatile deep learning-based sleep stage classifier	2
EpiBOX: An Automated Platform for Long-Term Biosignal Collection	2
Chronic jet lag-like conditions dysregulate molecular profiles of neurological disorders in nucleus accumbens and prefrontal cortex	2
FAIR in action: Brain-CODE - A neuroscience data sharing platform to accelerate brain research	2
Alternative patterns of deep brain stimulation in neurologic and neuropsychiatric disorders	2
The Case for Optimized Edge-Centric Tractography at Scale	2
Factorized discriminant analysis for genetic signatures of neuronal phenotypes	2
EDEN: A High-Performance, General-Purpose, NeuroML-Based Neural Simulator	2
Editorial: Multi-site neuroimage analysis: Domain adaptation and batch effects	2
Mitigating Computer Limitations in Replicating Numerical Simulations of a Neural Network Model With Hodgkin-Huxley-Type Neurons	2
A System-on-Chip Based Hybrid Neuromorphic Compute Node Architecture for Reproducible Hyper-Real-Time Simulations of Spiking Neural Networks	2
The pursuit of approaches to federate data to accelerate Alzheimer’s disease and related dementia research: GAAIN, DPUK, and ADDI	2
Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia	2
NWB Query Engines: Tools to Search Data Stored in Neurodata Without Borders Format	2
Enhanced Performance by Interpretable Low-Frequency Electroencephalogram Oscillations in the Machine Learning-Based Diagnosis of Post-traumatic Stress Disorder	2
Development and Reorganization of Orientation Representation in the Cat Visual Cortex: Experience-Dependent Synaptic Rewiring in Early Life	2
Nonconvex Nonlocal Tucker Decomposition for 3D Medical Image Super-Resolution	2
Novel hybrid visual stimuli incorporating periodic motions into conventional flickering or pattern-reversal visual stimuli for steady-state visual evoked potential-based brain-computer interfaces	2
Effect of subthalamic coordinated reset deep brain stimulation on Parkinsonian gait	2
A Programmable Ontology Encompassing the Functional Logic of the Drosophila Brain	2
Development and Validation of a Semi-Automated, Preclinical, MRI-Template Based PET Image Data Analysis Tool for Rodents	2
Predicting in vitro single-neuron firing rates upon pharmacological perturbation using Graph Neural Networks	2
Magnetic Resonance Imaging Sequence Identification Using a Metadata Learning Approach	2
Neuromorphic-P2M: processing-in-pixel-in-memory paradigm for neuromorphic image sensors	2
Review of Generative Adversarial Networks in mono- and cross-modal biomedical image registration	2
Acceleration of the SPADE Method Using a Custom-Tailored FP-Growth Implementation	2
State and Trait Anxiety Share Common Network Topological Mechanisms of Human Brain	2
A domain adaptation benchmark for T1-weighted brain magnetic resonance image segmentation	2
Video-based marker-free tracking and multi-scale analysis of mouse locomotor activity and behavioral aspects in an open field arena: A perspective approach to the quantification of complex gait distur	2
Towards Bridging the Gap Between Computational Intelligence and Neuroscience in Brain-Computer Interfaces With a Common Description of Systems and Data	2
Explainable artificial intelligence based on feature optimization for age at onset prediction of spinocerebellar ataxia type 3	2
Black-box and surrogate optimization for tuning spiking neural models of striatum plasticity	2
Event-Based Update of Synapses in Voltage-Based Learning Rules	2
A Waveform-Independent Measure of Recurrent Neural Activity	2