Frontiers in Neuroinformatics

Article	Citations
A Simulation Toolkit for Testing the Sensitivity and Accuracy of Corticometry Pipelines	132
Editorial: Innovative methods for sleep staging using neuroinformatics	78
The quest to share data	70
Intra-V1 functional networks and classification of observed stimuli	70
A multi-head self-attention deep learning approach for detection and recommendation of neuromagnetic high frequency oscillations in epilepsy	54
hvEEGNet: a novel deep learning model for high-fidelity EEG reconstruction	43
Chronic jet lag-like conditions dysregulate molecular profiles of neurological disorders in nucleus accumbens and prefrontal cortex	40
FN-OCT: Disease Detection Algorithm for Retinal Optical Coherence Tomography Based on a Fusion Network	38
Editorial: Neuroinformatics of large-scale brain modelling	37
Magnetic Resonance Imaging Sequence Identification Using a Metadata Learning Approach	36
State-dependent modulation of thalamocortical oscillations by gamma light flicker with different frequencies, intensities, and duty cycles	35
A computational model of Alzheimer's disease at the nano, micro, and macroscales	32
Detection of pulmonary embolism severity using clinical characteristics, hematological indices, and machine learning techniques	31
Deep Neuro-Vision Embedded Architecture for Safety Assessment in Perceptive Advanced Driver Assistance Systems: The Pedestrian Tracking System Use-Case	29
Systems Neuroscience Computing in Python (SyNCoPy): a python package for large-scale analysis of electrophysiological data	29
A standardized accelerometry method for characterizing tremor: Application and validation in an ageing population with postural and action tremor	28
versaFlow: a versatile pipeline for resolution adapted diffusion MRI processing and its application to studying the variability of the PRIME-DE database	27
Predicting the clinical prognosis of acute ischemic stroke using machine learning: an application of radiomic biomarkers on non-contrast CT after intravascular interventional treatment	26
Unsupervised method for representation transfer from one brain to another	24
Transdiagnostic clustering of self-schema from self-referential judgements identifies subtypes of healthy personality and depression	23
Multiple sclerosis and breast cancer risk: a meta-analysis of observational and Mendelian randomization studies	23
Efficient Simulation of 3D Reaction-Diffusion in Models of Neurons and Networks	23
Finding the limits of deep learning clinical sensitivity with fractional anisotropy (FA) microstructure maps	22
Tracking axon initial segment plasticity using high-density microelectrode arrays: A computational study	20
SynCoPa: Visualizing Connectivity Paths and Synapses Over Detailed Morphologies	20

Erratum: Mapping and validating a point neuron model on Intel's neuromorphic hardware Loihi	20
Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN	19
QuNex—An integrative platform for reproducible neuroimaging analytics	18
Analyzing Complex Problem Solving by Dynamic Brain Networks	18
Machine learning-based infection prediction model for newly diagnosed multiple myeloma patients	16
Multi-threshold image segmentation for melanoma based on Kapur’s entropy using enhanced ant colony optimization	16
Online interoperable resources for building hippocampal neuron models via the Hippocampus Hub	15
Light-weight neural network for intra-voxel structure analysis	15
BitBrain and Sparse Binary Coincidence (SBC) memories: Fast, robust learning and inference for neuromorphic architectures	15
Radiomics-driven neuro-fuzzy framework for rule generation to enhance explainability in MRI-based brain tumor segmentation	14
Half-UNet: A Simplified U-Net Architecture for Medical Image Segmentation	14
NeuroBridge ontology: computable provenance metadata to give the long tail of neuroimaging data a FAIR chance for secondary use	14
Editorial: Neuroscience, computing, performance, and benchmarks: Why it matters to neuroscience how fast we can compute	14
A review of risk concepts and models for predicting the risk of primary stroke	14
Scaling and Benchmarking an Evolutionary Algorithm for Constructing Biophysical Neuronal Models	14
Alternative patterns of deep brain stimulation in neurologic and neuropsychiatric disorders	14
Project, toolkit, and database of neuroinformatics ecosystem: A summary of previous studies on “Frontiers in Neuroinformatics”	14
EpiBOX: An Automated Platform for Long-Term Biosignal Collection	14
Age-Specific Adult Rat Brain MRI Templates and Tissue Probability Maps	13
Multi-omics integration reveals a six-malignant cell maker gene signature for predicting prognosis in high-risk neuroblastoma	13
A scalable implementation of the recursive least-squares algorithm for training spiking neural networks	13
Editorial: Addressing large scale computing challenges in neuroscience: current advances and future directions	13
Corrigendum: Mapping and validating a point neuron model on intel's neuromorphic hardware Loihi	13
Erratum: Advancing prediction of risk of intraoperative massive blood transfusion in liver transplantation with machine learning models. A multicenter retrospective study	13
Multi-Scale Graph Representation Learning for Autism Identification With Functional MRI	13
ConGen—A Simulator-Agnostic Visual Language for Definition and Generation of Connectivity in Large and Multiscale Neural Networks	12
2.5D and 3D segmentation of brain metastases with deep learning on multinational MRI data	12
Long-range temporal correlations in resting state alpha oscillations in major depressive disorder and obsessive-compulsive disorder	12
Recognition of MI-EEG signals using extended-LSR-based inductive transfer learning	12
A systematic comparison of deep learning methods for EEG time series analysis	12
Machine learning reveals interhemispheric somatosensory coherence as indicator of anesthetic depth	11
Contrastive self-supervised learning for neurodegenerative disorder classification	11
Time-Frequency Representations of Brain Oscillations: Which One Is Better?	11
The Multicentre Acute ischemic stroke imaGIng and Clinical data (MAGIC) repository: rationale and blueprint	11
SDA: a data-driven algorithm that detects functional states applied to the EEG of Guhyasamaja meditation	11
Synthesis of diffusion-weighted MRI scalar maps from FLAIR volumes using generative adversarial networks	11
PymoNNto: A Flexible Modular Toolbox for Designing Brain-Inspired Neural Networks	11
Discovering optimal features for neuron-type identification from extracellular recordings	10
Feature Selection Techniques for a Machine Learning Model to Detect Autonomic Dysreflexia	10
Editorial: Weakly supervised deep learning-based methods for brain image analysis	10
Enhanced Performance by Interpretable Low-Frequency Electroencephalogram Oscillations in the Machine Learning-Based Diagnosis of Post-traumatic Stress Disorder	10
A Quick and Easy Way to Estimate Entropy and Mutual Information for Neuroscience	10
A Validation of Supervised Deep Learning for Gait Analysis in the Cat	10
Events in context—The HED framework for the study of brain, experience and behavior	10
Towards Bridging the Gap Between Computational Intelligence and Neuroscience in Brain-Computer Interfaces With a Common Description of Systems and Data	10
Translating single-neuron axonal reconstructions into meso-scale connectivity statistics in the mouse somatosensory thalamus	10
STEPS 4.0: Fast and memory-efficient molecular simulations of neurons at the nanoscale	10
Dynamic topological data analysis: a novel fractal dimension-based testing framework with application to brain signals	9
Investigating cortical complexity and connectivity in rats with schizophrenia	9
PyDapsys: an open-source library for accessing electrophysiology data recorded with DAPSYS	9

MIIND : A Model-Agnostic Simulator of Neural Populations	9
RealNeuralNetworks.jl: An Integrated Julia Package for Skeletonization, Morphological Analysis, and Synaptic Connectivity Analysis of Terabyte-Scale 3D Neural Segmentations	9
A Toolbox and Crowdsourcing Platform for Automatic Labeling of Independent Components in Electroencephalography	9
Brain structural alterations in young girls with Rett syndrome: A voxel-based morphometry and tract-based spatial statistics study	9
Editorial: Navigating the landscape of FAIR data sharing and reuse: repositories, standards, and resources	9
Multi-Source Domain Adaptation Techniques for Mitigating Batch Effects: A Comparative Study	9
Enhanced heart sound anomaly detection via WCOS: a semi-supervised framework integrating wavelet, autoencoder and SVM	9
Power spectral analysis of voltage-gated channels in neurons	9
Brain-Computer Interface using neural network and temporal-spectral features	9
Multiscale co-simulation design pattern for neuroscience applications	9
Editorial: Physical neuromorphic computing and its industrial applications	8
Patterns of inflammation, microstructural alterations, and sodium accumulation define multiple sclerosis subtypes after 15 years from onset	8
Identifying discriminative features of brain network for prediction of Alzheimer’s disease using graph theory and machine learning	8
Neuroimaging article reexecution and reproduction assessment system	8
Can micro-expressions be used as a biomarker for autism spectrum disorder?	8
Classification of ROI-based fMRI data in short-term memory tasks using discriminant analysis and neural networks	8
Building a realistic, scalable memory model with independent engrams using a homeostatic mechanism	8
Editorial: Reproducible analysis in neuroscience	8
EPAT: a user-friendly MATLAB toolbox for EEG/ERP data processing and analysis	7
Matlab Open Source Code: Noise-Assisted Multivariate Empirical Mode Decomposition Based Causal Decomposition for Causality Inference of Bivariate Time Series	7
Efficient simulation of neural development using shared memory parallelization	7
Estimation of Emotional Arousal Changes of a Group of Individuals During Movie Screening Using Steady-State Visual-Evoked Potential	7
FlywheelTools: Data Curation and Manipulation on the Flywheel Platform	7
Explainable artificial intelligence based on feature optimization for age at onset prediction of spinocerebellar ataxia type 3	7
Introducing Region Based Pooling for handling a varied number of EEG channels for deep learning models	7
Decoding EEG rhythms offline and online during motor imagery for standing and sitting based on a brain-computer interface	7
Editorial: Recent applications of noninvasive physiological signals and artificial intelligence	7
Progressive 3D biomedical image registration network based on deep self-calibration	7
Neural simulation pipeline: Enabling container-based simulations on-premise and in public clouds	7
Impact of interferon-β and dimethyl fumarate on nonlinear dynamical characteristics of electroencephalogram signatures in patients with multiple sclerosis	7
FAIR in action: Brain-CODE - A neuroscience data sharing platform to accelerate brain research	7
Identifying Boys With Autism Spectrum Disorder Based on Whole-Brain Resting-State Interregional Functional Connections Using a Boruta-Based Support Vector Machine Approach	7
A canonical polyadic tensor basis for fast Bayesian estimation of multi-subject brain activation patterns	7
Prediction of Neural Diameter From Morphology to Enable Accurate Simulation	7
Brain subnetworks most sensitive to alterations of functional connectivity in Schizophrenia: a data-driven approach	6
Enhancing brain tumor detection in MRI with a rotation invariant Vision Transformer	6
Panama: An Open-Source Educational App for Ion Channel Biophysics Simulation	6
A new machine learning model for predicting severity prognosis in patients with pulmonary embolism: Study protocol from Wenzhou, China	6
Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults	6
Turbulent dynamics and whole-brain modeling: toward new clinical applications for traumatic brain injury	6
Efficient parameter calibration and real-time simulation of large-scale spiking neural networks with GeNN and NEST	6
Novel Hybrid Brain-Computer Interface for Virtual Reality Applications Using Steady-State Visual-Evoked Potential-Based Brain–Computer Interface and Electrooculogram-Based Eye Tracking for Increased I	6
Multi illumination color constancy based on multi-scale supervision and single-scale estimation cascade convolution neural network	6
A Systematic Approach for Explaining Time and Frequency Features Extracted by Convolutional Neural Networks From Raw Electroencephalography Data	6
Editorial: Bringing together data- and knowledge-driven solutions for a better understanding and effective diagnostics of neurological disorders	6
Deep CNN ResNet-18 based model with attention and transfer learning for Alzheimer's disease detection	6
BIDScoin: A User-Friendly Application to Convert Source Data to Brain Imaging Data Structure	6
Differential processing of intrinsic vs. extrinsic coordinates in wrist movement: connectivity and chronometry perspectives	6
The ROSMAP project: aging and neurodegenerative diseases through omic sciences	6
Comparing the Performance of Two Radiomic Models to Predict Progression and Progression Speed of White Matter Hyperintensities	5
Functional MRI study of feedback-based reinforcement learning in depression	5
Quantifying evoked responses through information-theoretical measures	5
A generalized deep learning network for fractional anisotropy reconstruction: Application to epilepsy and multiple sclerosis	5
Extended Invariant Information Clustering Is Effective for Leave-One-Site-Out Cross-Validation in Resting State Functional Connectivity Modeling	5
Development and Validation of a Semi-Automated, Preclinical, MRI-Template Based PET Image Data Analysis Tool for Rodents	5
An enhanced deep deterministic policy gradient algorithm for intelligent control of robotic arms	5
M3: using mask-attention and multi-scale for multi-modal brain MRI classification	5
Evaluation of an English language phoneme-based imagined speech brain computer interface with low-cost electroencephalography	5
Improving the detection of sleep slow oscillations in electroencephalographic data	5
SparNet: A Convolutional Neural Network for EEG Space-Frequency Feature Learning and Depression Discrimination	5
Single Image-Based Vignetting Correction for Improving the Consistency of Neural Activity Analysis in 2-Photon Functional Microscopy	5
Artificial intelligence role in advancement of human brain connectome studies	5
Efficient federated learning for distributed neuroimaging data	5
Modernizing the NEURON Simulator for Sustainability, Portability, and Performance	5
suMRak: a multi-tool solution for preclinical brain MRI data analysis	5
A System-on-Chip Based Hybrid Neuromorphic Compute Node Architecture for Reproducible Hyper-Real-Time Simulations of Spiking Neural Networks	5
A Robust Modular Automated Neuroimaging Pipeline for Model Inputs to TheVirtualBrain	5
Editorial: Bio-Inspired Physiological Signal(s) and Medical Image(s) Neural Processing Systems Based on Deep Learning and Mathematical Modeling for Implementing Bio-Engineering Applications in Medical	5
Fiber Clustering Acceleration With a Modified Kmeans++ Algorithm Using Data Parallelism	5
Maximum likelihood-based estimation of diffusion coefficient is quick and reliable method for analyzing estradiol actions on surface receptor movements	5
Test-retest reliability of peak location in the sensorimotor network of resting state fMRI for potential rTMS targets	5
The Case for Optimized Edge-Centric Tractography at Scale	5
Deep Learning in Large and Multi-Site Structural Brain MR Imaging Datasets	4
3D Segmentation of Perivascular Spaces on T1-Weighted 3 Tesla MR Images With a Convolutional Autoencoder and a U-Shaped Neural Network	4
Brain MRI sequence and view plane identification using deep learning	4
Domain adaptation for EEG-based, cross-subject epileptic seizure prediction	4
TReC: Transferred ResNet and CBAM for Detecting Brain Diseases	4
Microglial morphometric analysis: so many options, so little consistency	4
Editorial: Brain Modeling of Neurogenerative Disorders	4
Comparison of CNN-Learned vs. Handcrafted Features for Detection of Parkinson's Disease Dysgraphia in a Multilingual Dataset	4

Video-based marker-free tracking and multi-scale analysis of mouse locomotor activity and behavioral aspects in an open field arena: A perspective approach to the quantification of complex gait distur	4
A fast and robust hippocampal subfields segmentation: HSF revealing lifespan volumetric dynamics	4
BrainQuake: An Open-Source Python Toolbox for the Stereoelectroencephalography Spatiotemporal Analysis	4
Enhancing human activity recognition for the elderly and individuals with disabilities through optimized Internet-of-Things and artificial intelligence integration with advanced neural networks	4
Effects of individualized brain anatomies and EEG electrode positions on inferred activity of the primary auditory cortex	4
Early detection of mild cognitive impairment through neuropsychological tests in population screenings: a decision support system integrating ontologies and machine learning	4
Neural network system for analyzing statistical factors of patients for predicting the survival of dental implants	4
vol2Brain: A New Online Pipeline for Whole Brain MRI Analysis	4
Identifying natural inhibitors against FUS protein in dementia through machine learning, molecular docking, and dynamics simulation	4
Medical Image Interpolation Using Recurrent Type-2 Fuzzy Neural Network	4
Modeling Neurodegeneration in silico With Deep Learning	4
The image and data archive at the laboratory of neuro imaging	4
Clinica: An Open-Source Software Platform for Reproducible Clinical Neuroscience Studies	4
ProbeInterface: A Unified Framework for Probe Handling in Extracellular Electrophysiology	4
LLRHNet: Multiple Lesions Segmentation Using Local-Long Range Features	3
Quantitative assessment of neurodevelopmental maturation: a comprehensive systematic literature review of artificial intelligence-based brain age prediction in pediatric populations	3
Characterizing Network Search Algorithms Developed for Dynamic Causal Modeling	3
Review of Generative Adversarial Networks in mono- and cross-modal biomedical image registration	3
On the Use of a Multimodal Optimizer for Fitting Neuron Models. Application to the Cerebellar Granule Cell	3
Software tool for visualization of a probabilistic map of the epileptogenic zone from seizure semiologies	3
The EBRAINS Hodgkin-Huxley Neuron Builder: An online resource for building data-driven neuron models	3
NeuroDecodeR: a package for neural decoding in R	3
Neuromorphic-P2M: processing-in-pixel-in-memory paradigm for neuromorphic image sensors	3
Novel methods for elucidating modality importance in multimodal electrophysiology classifiers	3
NIDM-Terms: community-based terminology management for improved neuroimaging dataset descriptions and query	3
An enhanced ant colony optimizer with Cauchy-Gaussian fusion and novel movement strategy for multi-threshold COVID-19 X-ray image segmentation	3
The pursuit of approaches to federate data to accelerate Alzheimer’s disease and related dementia research: GAAIN, DPUK, and ADDI	3
Harmonizing AI governance regulations and neuroinformatics: perspectives on privacy and data sharing	3
DarkASDNet: Classification of ASD on Functional MRI Using Deep Neural Network	3
A Spiking Neural Network Builder for Systematic Data-to-Model Workflow	3
Commentary: Accelerating spiking neural network simulations with PymoNNto and PymoNNtorch	3
LaminaRGeneVis: A Tool to Visualize Gene Expression Across the Laminar Architecture of the Human Neocortex	3
Comparing feature selection and machine learning approaches for predicting CYP2D6 methylation from genetic variation	3
Enabling uncertainty estimation in neural networks through weight perturbation for improved Alzheimer's disease classification	3
Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia	3
Expected affine: A registration method for damaged section in serial sections electron microscopy	3
Brian2CUDA: Flexible and Efficient Simulation of Spiking Neural Network Models on GPUs	3
Reproducible supervised learning-assisted classification of spontaneous synaptic waveforms with Eventer	3
DR-IIXRN : Detection Algorithm of Diabetic Retinopathy Based on Deep Ensemble Learning and Attention Mechanism	3
Non-stationary neural signal to image conversion framework for image-based deep learning algorithms	3
NeuroWRAP: integrating, validating, and sharing neurodata analysis workflows	3
Exploring white matter dynamics and morphology through interactive numerical phantoms: the White Matter Generator	3
Intradialytic hypotension prediction using covariance matrix-driven whale optimizer with orthogonal structure-assisted extreme learning machine	3
An accessible and versatile deep learning-based sleep stage classifier	3
Mitigating Computer Limitations in Replicating Numerical Simulations of a Neural Network Model With Hodgkin-Huxley-Type Neurons	3