OOIR: Observatory of International Research

Papers

(The TQCC of Tree Genetics & Genomes is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-04-01 to 2024-04-01.)

Article	Citations
Evaluating the accuracy of genomic prediction for the management and conservation of relictual natural tree populations	31
Selective efficiency of genome-wide selection in Coffea canephora breeding	23
Expected benefits of genomic selection for growth and wood quality traits in Eucalyptus grandis	21
Transcriptome analysis and postharvest behavior of the kiwifruit ‘Actinidia deliciosa’ reveal the role of ethylene-related phytohormones during fruit ripening	15
Prediction accuracy of single-step BLUP for growth and wood quality traits in the lodgepole pine breeding program in British Columbia	15
Optimization of Eucalyptus breeding through random regression models allowing for reaction norms in response to environmental gradients	15
“A reference genome assembly and adaptive trait analysis of Castanea mollissima ‘Vanuxem,’ a source of resistance to chestnut blight in restoration breeding”	15
Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families	14
A new SSR fingerprinting set and its comparison to existing SSR- and SNP-based genotyping platforms to manage Pyrus germplasm resources	14
Advances in genomics of cashew tree: molecular tools and strategies for accelerated breeding	13
A low citric acid trait in cranberry: genetics and molecular mapping of a locus impacting fruit acidity	12
Identification and functional study of oleoresin terpenoid biosynthesis-related genes in masson pine (Pinus massoniana L.) based on transcriptome analysis	12
Fine mapping of the locus controlling self-incompatibility in European hazelnut	12
Plastome characterization and comparative analyses of wild crabapples (Malus baccata and M. toringo): insights into infraspecific plastome variation and phylogenetic relationships	11
Overexpression of a tonoplast Na+/H+ antiporter from the halophytic shrub Nitraria sibirica improved salt tolerance and root development in transgenic poplar	11
Genetic diversity analysis of Chinese plum (Prunus salicina L.) based on whole-genome resequencing	11
Comparison of selection methods for the establishment of a core collection using SSR markers for hazelnut (Corylus avellana L.) accessions from European germplasm repositories	11
Genetics to the rescue: managing forests sustainably in a changing world	11
Integrating evolutionary, demographic and ecophysiological processes to predict the adaptive dynamics of forest tree populations under global change	11
Comparative plastid genome analyses of Rosa: Insights into the phylogeny and gene divergence	10
Genetic classification of Vietnamese cacao cultivars assessed by SNP and SSR markers	10
A reference high-density genetic map of Theobroma grandiflorum (Willd. ex Spreng) and QTL detection for resistance to witches’ broom disease (Moniliophthora perniciosa)	10
Gene-ecological zonation and population genetic structure of Tectona grandis L.f. in India revealed by genome-wide SSR markers	10
Overexpression of the bamboo sucrose synthase gene (BeSUS5) improves cellulose production, cell wall thickness and fiber quality in transgenic poplar	10
Genetic analysis of central Anatolian grapevine (Vitis vinifera L.) germplasm by simple sequence repeats	10

Polyamine oxidase (PAO)–mediated polyamine catabolism plays potential roles in peach (Prunus persica L.) fruit development and ripening	10
An accumulation of genetic variation and selection across the disease-related genes during apple domestication	10
Comparison of structure analyses and core collections for the management of walnut genetic resources	10
Genome-wide association study of myrtle rust (Austropuccinia psidii) resistance in Eucalyptus obliqua (subgenus Eucalyptus)	9
Genomic relationship–based genetic parameters and prospects of genomic selection for growth and wood quality traits in Eucalyptus benthamii	9
ABA influences color initiation timing in P. avium L. fruits by sequentially modulating the transcript levels of ABA and anthocyanin-related genes	9
Using genotyping-by-sequencing derived SNPs to examine the genetic structure and identify a core set of Corylus americana germplasm	9
Chloroplast genome sequences of Carya illinoinensis from two distinct geographic populations	9
Species delimitation and phylogeography of African tree populations of the genus Parkia (Fabaceae)	9
SNP markers associated with resistance to frosty pod and black pod rot diseases in an F1 population of Theobroma cacao L.	9
Patterns of genetic variation in leading-edge populations of Quercus robur: genetic patchiness due to family clusters	9
Cytoplasmic DNA variation does not support a recent contribution of Pinus sylvestris L. from the Caucasus to the main range	9
Quantitative and molecular genetic variation among botanical varieties and subpopulations of Hancornia speciosa Gomes (Apocynaceae)	9
A low malic acid trait in cranberry fruit: genetics, molecular mapping, and interaction with a citric acid locus	9
Seed and pollen dispersal and fine-scale spatial genetic structure of a threatened tree species: Pericopsis elata (HARMS) Meeuwen (Fabaceae)	8
Genetic structure of two Acrocomia ecotypes (Arecaceae) across Brazilian savannas and seasonally dry forests	8
Comprehensive mechanistic insights into the citrus genetics, breeding challenges, biotechnological implications, and omics-based interventions	8
Efficient low-cost marker-assisted selection of trees with MALE STERILITY 1 (MS1) in Japanese cedar (Cryptomeria japonica D. Don) using bulk DNA samples	7
Primer development and functional classification of EST-SSR markers in Ulmus species	7
Haplotype structure analysis of a locus associated with fruit skin type on chromosome 8 in Japanese pear	7
Genomic breeding values’ prediction including populational selfing rate in an open-pollinated Eucalyptus globulus breeding population	7
Linkage mapping and QTL analysis of pecan (Carya illinoinensis) full-siblings using genotyping-by-sequencing	7
Transcriptome analysis reveals genes associated with leaf color mutants in Cymbidium longibracteatum	7
Marker associations for fusiform rust resistance in a clonal population of loblolly pine (Pinus taeda, L.)	7
Genetics in and opportunities for improvement of Nordmann fir (Abies nordmanniana (Steven) Spach) Christmas tree production	7
The R2R3-MYB transcription factor VcMYB4a inhibits lignin biosynthesis in blueberry (Vaccinium corymbosum)	6
Advanced genebank management of genetic resources of European wild apple, Malus sylvestris, using genome-wide SNP array data	6
QTL analysis of crown gall disease resistance in apple: first plant R gene candidates effective against Rhizobium rhizogenes (Ti)	6
The haplotype-resolved reference genome of lemon (Citrus limon L. Burm f.)	6
Phylogeography and phylogeny of genus Quercus L. (Fagaceae) in Turkey implied by variations of trnT(UGU)-L(UAA)-F (GAA) chloroplast DNA region	6
Assembly of Satsuma mandarin mitochondrial genome and identification of cytoplasmic male sterility–specific ORFs in a somatic cybrid of pummelo	6
Genome-wide identification and expression profiles of phased siRNAs in a male-sterile somatic cybrid of pummelo (Citrus grandis)	6