OOIR: Observatory of International Research

Papers

(The TQCC of Tree Genetics & Genomes is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)

Article	Citations
Evaluating the accuracy of genomic prediction for the management and conservation of relictual natural tree populations	34
Transcriptome analysis and postharvest behavior of the kiwifruit ‘Actinidia deliciosa’ reveal the role of ethylene-related phytohormones during fruit ripening	18
A reference high-density genetic map of Theobroma grandiflorum (Willd. ex Spreng) and QTL detection for resistance to witches’ broom disease (Moniliophthora perniciosa)	14
Fine mapping of the locus controlling self-incompatibility in European hazelnut	14
Genetic diversity analysis of Chinese plum (Prunus salicina L.) based on whole-genome resequencing	13
Comparative plastid genome analyses of Rosa: Insights into the phylogeny and gene divergence	12
Polyamine oxidase (PAO)–mediated polyamine catabolism plays potential roles in peach (Prunus persica L.) fruit development and ripening	12
Genome-wide association study of myrtle rust (Austropuccinia psidii) resistance in Eucalyptus obliqua (subgenus Eucalyptus)	11
ABA influences color initiation timing in P. avium L. fruits by sequentially modulating the transcript levels of ABA and anthocyanin-related genes	11
A low malic acid trait in cranberry fruit: genetics, molecular mapping, and interaction with a citric acid locus	11
Plastome characterization and comparative analyses of wild crabapples (Malus baccata and M. toringo): insights into infraspecific plastome variation and phylogenetic relationships	11
Comparison of selection methods for the establishment of a core collection using SSR markers for hazelnut (Corylus avellana L.) accessions from European germplasm repositories	11
Gene-ecological zonation and population genetic structure of Tectona grandis L.f. in India revealed by genome-wide SSR markers	11
An accumulation of genetic variation and selection across the disease-related genes during apple domestication	11
Genomic relationship–based genetic parameters and prospects of genomic selection for growth and wood quality traits in Eucalyptus benthamii	11
SNP markers associated with resistance to frosty pod and black pod rot diseases in an F1 population of Theobroma cacao L.	11
Seed and pollen dispersal and fine-scale spatial genetic structure of a threatened tree species: Pericopsis elata (HARMS) Meeuwen (Fabaceae)	10
Phylogeography and phylogeny of genus Quercus L. (Fagaceae) in Turkey implied by variations of trnT(UGU)-L(UAA)-F (GAA) chloroplast DNA region	9
Correction to: The haplotype‑resolved reference genome of lemon (Citrus limon L. Burm f.)	9
Haplotype structure analysis of a locus associated with fruit skin type on chromosome 8 in Japanese pear	9
Comprehensive mechanistic insights into the citrus genetics, breeding challenges, biotechnological implications, and omics-based interventions	9
Assembly of Satsuma mandarin mitochondrial genome and identification of cytoplasmic male sterility–specific ORFs in a somatic cybrid of pummelo	9
The R2R3-MYB transcription factor VcMYB4a inhibits lignin biosynthesis in blueberry (Vaccinium corymbosum)	8
Genetic diversity and structure of the endemic and critically endangered Populus caspica in the Hyrcanian forests	8
Exposure of Eucalyptus to varied temperature and CO2 has a profound effect on the physiology and expression of genes related to cell wall formation and remodeling	8

Continental-wide population genetics and post-Pleistocene range expansion in field maple (Acer campestre L.), a subdominant temperate broadleaved tree species	7
The haplotype-resolved reference genome of lemon (Citrus limon L. Burm f.)	7
Patterns of genomic diversity and linkage disequilibrium across the disjunct range of the Australian forest tree Eucalyptus globulus	7
Linkage mapping and QTL analysis of pecan (Carya illinoinensis) full-siblings using genotyping-by-sequencing	7
Genome-wide association analysis and validation with KASP markers for nut and shell traits in almond (Prunus dulcis [Mill.] D.A.Webb)	7
Efficient low-cost marker-assisted selection of trees with MALE STERILITY 1 (MS1) in Japanese cedar (Cryptomeria japonica D. Don) using bulk DNA samples	7
Genomic breeding values’ prediction including populational selfing rate in an open-pollinated Eucalyptus globulus breeding population	7
Advanced genebank management of genetic resources of European wild apple, Malus sylvestris, using genome-wide SNP array data	7
Enviromic prediction enables the characterization and mapping of Eucalyptus globulus Labill breeding zones	7
Marker associations for fusiform rust resistance in a clonal population of loblolly pine (Pinus taeda, L.)	7
Date palm (Phoenix dactylifera L.) genetic improvement via biotechnological approaches	7
QTL analysis of crown gall disease resistance in apple: first plant R gene candidates effective against Rhizobium rhizogenes (Ti)	7
Parent–offspring variation transmission in full-sib families revealed predominantly paternal inheritance of chloroplast DNA in Pinus massoniana (Pinaceae)	6
Genomics and adaptation in forest ecosystems	6
Diversity and structure of Coffea canephora from old seminal crops in Espírito Santo, Brazil: genetic resources for coffee breeding	6
DArTseq-derived SNPs for the genus Psidium reveal the high diversity of native species	6
Application of linear mixed models for multiple harvest/site trial analyses in perennial plant breeding	6
Genetic diversity and population structure analyses in the Alpine plum (Prunus brigantina Vill.) confirm its affiliation to the Armeniaca section	6
The transcriptomes of healthy and bitter pit-affected ‘Honeycrisp’ fruit reveal genes associated with disorder development and progression	6
Phylogeography and genetic structure of a subarctic-alpine shrub species, Alnus alnobetula (Ehrh.) K. Koch s. l., inferred from chloroplast DNA markers	5
Genome-wide association study for apple flesh browning: detection, validation, and physiological roles of QTLs	5
Genetic variation in fire recovery and other fire-related traits in a global eucalypt species	5
Genetic structure of an important widely distributed tropical forest tree, Shorea parvifolia, in Southeast Asia	5
Single nucleotide polymorphism analysis in Leptospermum scoparium (Myrtaceae) supports two highly differentiated endemic species in Aotearoa New Zealand and Australia	5
Mapping of QTLs for citrus quality traits throughout the fruit maturation process on clementine (Citrus reticulata × C. sinensis) and mandarin (C. reticulata Blanco) genetic maps	5
Spatial genetic structure and mating system in forest tree populations from seasonally dry tropical forests: a review	5