OOIR: Observatory of International Research

Papers

(The TQCC of Protein Journal is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-04-01 to 2024-04-01.)

Article	Citations
The Proteins of Severe Acute Respiratory Syndrome Coronavirus-2 (SARS CoV-2 or n-COV19), the Cause of COVID-19	389
Role of Oxidative Stress on SARS-CoV (SARS) and SARS-CoV-2 (COVID-19) Infection: A Review	200
Structure-Based Identification of Potential Drugs Against FmtA of Staphylococcus aureus: Virtual Screening, Molecular Dynamics, MM-GBSA, and QM/MM	47
In Silico Evaluation of Prospective Anti-COVID-19 Drug Candidates as Potential SARS-CoV-2 Main Protease Inhibitors	41
Production of Industrial Enzymes via Pichia pastoris as a Cell Factory in Bioreactor: Current Status and Future Aspects	37
Protein Structure Prediction: Conventional and Deep Learning Perspectives	35
An Overview of the Crystallized Structures of the SARS-CoV-2	32
A Biochemical Perspective of the Nonstructural Proteins (NSPs) and the Spike Protein of SARS CoV-2	22
A Journey with LGMD: From Protein Abnormalities to Patient Impact	21
FTIR Spectroscopy Detects Intermolecular β-Sheet Formation Above the High Temperature Tm for Two Monoclonal Antibodies	20
Comparison of Binding Site of Remdesivir and Its Metabolites with NSP12-NSP7-NSP8, and NSP3 of SARS CoV-2 Virus and Alternative Potential Drugs for COVID-19 Treatment	15
Bacillus sonorensis L. Asparaginase: Cloning, Expression in E. coli and Characterization	12
Protein–Protein Docking: Past, Present, and Future	12
Milk Peptides as Novel Multi‐Targeted Therapeutic Candidates for SARS-CoV2	11
Separation of Storage Proteins (7S and 11S) from Soybean Seed, Meals and Protein Isolate Using an Optimized Method Via Comparison of Yield and Purity	11
UMAP-DBP: An Improved DNA-Binding Proteins Prediction Method Based on Uniform Manifold Approximation and Projection	11
Immobilization of Cellulase onto Core-Shell Magnetic Gold Nanoparticles Functionalized by Aspartic Acid and Determination of its Activity	11
Enzymes for Efficient CO2 Conversion	11
The Formation of Native Disulfide Bonds: Treading a Fine Line in Protein Folding	10
A Review of Functional Characterization of Single Amino Acid Change Mutations in HNF Transcription Factors in MODY Pathogenesis	10
Lectin-Like Activity of Hemocyanin in Freshwater Prawn, Macrobrachium rosenbergii	9
Bioactive Molecules Derived from Snake Venoms with Therapeutic Potential for the Treatment of Thrombo-Cardiovascular Disorders Associated with COVID-19	9
The Structure Biology of Tau and Clue for Aggregation Inhibitor Design	9
Glioma-Targeted Therapeutics: Computer-Aided Drug Design Prospective	9
Expression and Purification of a Recombinant Enterotoxin Protein Using Different E. coli Host Strains and Expression Vectors	8

Fibrinolytic and ACE Inhibitory Activity of Nattokinase Extracted from Bacillus subtilis VITMS 2: A Strain Isolated from Fermented Milk of Vigna unguiculata	8
Jasplakinolide Attenuates Cell Migration by Impeding Alpha-1-syntrophin Protein Phosphorylation in Breast Cancer Cells	8
Protein Production and Purification of a Codon-Optimized Human NGN3 Transcription Factor from E. coli	8
Effect of Metal Ions on the Activity of Ten NAD-Dependent Formate Dehydrogenases	7
Proteomic Analysis of Extracellular Vesicles Derived from MDA-MB-231 Cells in Microgravity	7
The Last Secret of Protein Folding: The Real Relationship Between Long-Range Interactions and Local Structures	7
Synthesis and Characterization of Novel Chickpea Protein Hydrolysate-Vanadium Complexes Having Cell Inhibitory Effects on Lung Cancer A549 Cells Lines	7
Proteomic Profile of Sperm in Infertile Males Reveals Changes in Metabolic Pathways	7
Targeting the Autophagy Specific Lipid Kinase VPS34 for Cancer Treatment: An Integrative Repurposing Strategy	6
Isolation and Functional Identification of an Antiplatelet RGD-Containing Disintegrin from Cerastes cerastes Venom	6
Recombinant Production and Characterization of an Extracellular Subtilisin-Like Serine Protease from Acinetobacter baumannii of Fermented Food Origin	6
Microalgal Bioprocess Toward the Production of Microalgal Oil Loaded Bovine Serum Albumin Nanoparticles	6
Bacteriophage Endolysin: A Powerful Weapon to Control Bacterial Biofilms	6
Expression, Purification and Characterization of a ZIP Family Transporter from Desulfovibrio vulgaris	6
Purification and Characterization of Trehalase From Acyrthosiphon pisum, a Target for Pest Control	6
16S rRNA Methyltransferases as Novel Drug Targets Against Tuberculosis	6
Immobilization of Fungal Cellulases Highlighting β-Glucosidase: Techniques, Supports, Chemical, and Physical Changes	5
Molecular Cloning, Expression and Characterisation of a Bacterial Myrosinase from Citrobacter Wye1	5
Effects of Distal Mutations on Prolyl-Adenylate Formation of Escherichia coli Prolyl-tRNA Synthetase	5
Oxidative Damage? Not a Problem! The Characterization of Humanin-like Mitochondrial Peptide in Anoxia Tolerant Freshwater Turtles	5
Expression, Purification, Characterization and Cellular Uptake of MeCP2 Variants	5
Identification and Heterologous Production of a Lipase from Geobacillus kaustophilus DSM 7263T and Tailoring Its N-Terminal by a His-Tag Epitope	5
Purification and Regulation of Pyruvate Kinase from the Foot Muscle of the Anoxia and Freeze Tolerant Marine Snail, Littorina littorea	5
Structure of Yak Lactoperoxidase at 1.55 Å Resolution	5
In Silico Study of Mutational Stability of SARS-CoV-2 Proteins	5
Role of ionic liquids on stabilization of therapeutic proteins and model proteins	5
Proteomic Characterization and Target Identification Against Streptococcus mutans Under Bacitracin Stress Conditions Using LC–MS and Subtractive Proteomics	5
Biophysical and In-Silico Studies of Phytochemicals Targeting Chorismate Synthase from Drug-Resistant Moraxella Catarrhalis	5
Integrated In Silico-In Vitro Identification and Optimization of Bone Morphogenic Protein-2 Armpit Epitope as Its Antagonist Binding Site	5
Structure Analysis of Proteins and Peptides by Difference Circular Dichroism Spectroscopy	4
Evolution of Stronger SARS-CoV-2 Variants as Revealed Through the Lens of Molecular Dynamics Simulations	4
Maltose Induced Expression of Cecropin AD by SUMO Technology in Bacillus subtilis WB800N	4
Heterologous Expression and Partial Characterization of a New Alanine Dehydrogenase from Amycolatopsis sulphurea	4
Complete Model of Vinculin Suggests the Mechanism of Activation by Helical Super-Bundle Unfurling	4
Antineoplastic Effects and Mechanisms of a New RGD Chimeric Peptide from Bullfrog Skin on the Proliferation and Apoptosis of B16F10 Cells	4
Interaction of Native- and Oxidized-Low-Density Lipoprotein with Human Estrogen Sulfotransferase	4
Soluble Expression and Catalytic Properties of Codon-Optimized Recombinant Bromelain from MD2 Pineapple in Escherichia coli	4
Comparative Analyses of Human Exosome Proteomes	4
A Trade-off Between Thermostability and Binding Affinity of Anti-(4-hydroxy-3-nitrophenyl)Acetyl Antibodies During the Course of Affinity Maturation	4
Random Coils of Proteins Situated Between a Beta Strand and an Alpha Helix Demonstrate Decreased Solvent Accessibility	4
Trehalose Inhibits the Heat-Induced Formation of the Amyloid-Like Structure of Soluble Proteins Isolated from Human Cataract Lens	4
Improved 3-D Protein Structure Predictions using Deep ResNet Model	4
Recombinant Production and Biochemical Characterization of Thermostable Arabinofuranosidase from Acidothermophilic Alicyclobacillus Acidocaldarius	4
Proteomic Analysis of Lipid Droplets in Sesamum indicum	4
TLPdb: A Resource for Thaumatin-Like Proteins	3
Defense Response in Chickpea Pod Wall due to Simulated Herbivory Unfolds Differential Proteome Profile	3
Molecular and Computational Analysis Identify Statins as Selective Inhibitors of Human Butyrylcholinesterase	3
Intermolecular And Dynamic Investigation of The Mechanism of Action of Reldesemtiv on Fast Skeletal Muscle Troponin Complex Toward the Treatment of Impaired Muscle Function	3
Design of an Epitope-Based Peptide Vaccine Against the Major Allergen Amb a 11 Using Immunoinformatic Approaches	3
Protein Analysis of Pollen Tubes after the Treatments of Membrane Trafficking Inhibitors Gains Insights on Molecular Mechanism Underlying Pollen Tube Polar Growth	3

Application of a Distance-Dependent Sigmoidal Dielectric Constant to the REMC/SAAP3D Simulations of Chignolin, Trp-Cage, and the G10q Mutant	3
Most Probable Druggable Pockets in Mutant p53-Arg175His Clusters Extracted from Gaussian Accelerated Molecular Dynamics Simulations	3
A Peptide Bond from the Inter-lobe Segment in the Bilobal Lactoferrin Acts as a Preferred Site for Cleavage for Serine Proteases to Generate the Perfect C-lobe: Structure of the Pepsin Hydrolyzed Lact	3
Rifampicin Increases Expression of Plant Codon-Optimized Bacillus thuringiensis δ-Endotoxin Genes in Escherichia coli	3
RNA and DNA Binding Epitopes of the Cold Shock Protein TmCsp from the Hyperthermophile Thermotoga maritima	3
Structural Flexibility of Peripheral Loops and Extended C-terminal Domain of Short Length Substrate Binding Protein from Rhodothermus marinus	3
Expression of Codon-Optimized Gene Encoding Murine Moloney Leukemia Virus Reverse Transcriptase in Escherichia coli	3
Residue Interaction Network Analysis Predicts a Val24–Ile31 Interaction May be Involved in Preventing Amyloid‐Beta (1–42) Primary Nucleation	3
Modeling and Experimental Validation of Algorithms for Maximum Quantity of Protein to be Immobilized on Solid Supports by Electrostatic Adsorption in the Strategy of Rational Design of Immobilized Der	3
Identification of Structural Elements of the Lysine Specific Demethylase 2B CxxC Domain Associated with Replicative Senescence Bypass in Primary Mouse Cells	3
A Retrospective on the Development of Methods for the Analysis of Protein Conformational Ensembles	3
Effect of Freezing Time on Tissue Factor Activity and Macronutrients of Human Milk	3
Key Challenges of Microbial Degradation of Keratinous Wastes	3
Molecular Characterization of Bacterial Fibrinolytic Proteins from Indonesian Traditional Fermented Foods	3
Ligand Based Virtual Screening Using Self-organizing Maps	3
Royal Jelly Proteins Inhibit Macrophage Proliferation: Interactions with Native- and Oxidized-Low Density Lipoprotein	3
Update and Potential Opportunities in CBP [Cyclic Adenosine Monophosphate (cAMP) Response Element-Binding Protein (CREB)-Binding Protein] Research Using Computational Techniques	3
Bioactive Phytocompounds: Anti-amyloidogenic Effects Against Hen Egg-White Lysozyme Aggregation	3
Perspective on the Role of Antibodies and Potential Therapeutic Drugs to Combat COVID-19	3