OOIR: Observatory of International Research

Papers

(The TQCC of Biochimica et Biophysica Acta-Proteins and Proteomics is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-12-01 to 2025-12-01.)

Article	Citations
Co-chaperonin GroES subunit exchange as dependent on time, pH, protein concentration, and urea	53
TMB Stab-pred: Predicting the stability of transmembrane β-barrel proteins using their sequence and structural signatures	34
Solution-based studies on the contact between the complement receptor 3 ligand-binding domain and simvastatin	29
Structure of the complex of camel peptidoglycan recognition protein-S with hexanoic acid reveals novel features of the versatile ligand-binding site at the dimeric interface	28
The regulation of the thermal stability and affinity of the HSPA5 (Grp78/BiP) by clients and nucleotides is modulated by domains coupling	21
CDR identification, epitope mapping and binding affinity determination of novel monoclonal antibodies generated against human apolipoprotein B-100	19
Current status and future prospects for ion-mobility mass spectrometry in the biopharmaceutical industry	19
Deep learning-based method for predicting and classifying the binding affinity of protein-protein complexes	18
Active roles of lytic polysaccharide monooxygenases in human pathogenicity	17
Beta-KTx14.3, a scorpion toxin, blocks the human potassium channel KCNQ1	17
Chemical proteomics approaches for protein post-translational modification studies	17
Binding interactions in a kinase active site modulate background ATP hydrolysis	15
Structure and functional studies of Avt1, a novel peptide from the sea anemone Aulactinia veratra	14
AP lyase activity of the human ribosomal protein uS3: The DNA cleavage sequence specificity and the location of the enzyme active center	14
Epitope mapping of SARS-CoV-2 RBDs by hydroxyl radical protein footprinting reveals the importance of including negative antibody controls	14
An intermolecular hydrogen bonded network in the PRELID-TRIAP protein family plays a role in lipid sensing	14
The oxidative nuclease activity of human cytochrome c with mutations in Ω-loop C/D	14
Green tea polyphenol EGCG acts differentially on end-stage amyloid polymorphs of α-synuclein formed in different polyol osmolytes	13
Editorial Board	11
Seq2Enz: An application of mask BLAST methodology with a new chemical logic of amino acids for improved enzyme function prediction	11
A single amino acid difference between archaeal and human type 2 methionine aminopeptidases differentiates their affinity towards ovalicin	11
Editorial Board	10
Exploring human carboxylesterases 1 and 2 selectivity of two families of substrates at an atomistic level	9
Recent technological developments for native mass spectrometry	9
Editorial Board	9

Bacteriophage-encoded chaperonins stimulate prion protein fibrillation in an ATP-dependent manner	9
Plumbagin accelerates serum albumin's amyloid aggregation kinetics and generates fibril polymorphism by inducing non-native β-sheet structures	9
Uncovering the membrane-integrated SecAN protein that plays a key role in translocating nascent outer membrane proteins	9
Corrigendum to ‘Glycoproteomic characterization of Neuropilin-1 reveals critical glycosylation sites for SARS-CoV-2 entry’ [Biochimica et Biophysica Acta (BBA) - proteins and proteomics 1873 (5) (2025	8
Unravelling the phosphoregulatory network of protein kinase C-delta (PKC-δ)	8
Profilings of subproteomes of lectin-binding proteins of nine Bothrops venoms reveal variability driven by different glycan types	8
Editorial Board	8
Citrus flavanone metabolites significantly modulate global proteomic profile in pancreatic β-cells under high-glucose-induced metabolic stress	8
Elucidation of multifunctionality and substrate specificity of human aspartate aminotransferases	8
Structural-functional relevance of DNAJBs in protein aggregation and associated neurodegenerative diseases	8
Importance of aspartate 4 in the Mg2+ dependent regulation of Leishmania major PAS domain-containing phosphoglycerate kinase	8
Biochemical and kinetic properties of quinone oxidoreductase from Leishmania orientalis, a member of medium-chain dehydrogenase/reductase superfamily	8
Impaired nuclear transport induced by juvenile ALS causing P525L mutation in NLS domain of FUS: A molecular mechanistic study	7
Insights into the role of F26 residue in the FMN: ATP adenylyltransferase activity of Staphylococcus aureus FAD synthetase	7
Distinct dynamical features of plasmodial and human HSP70-HSP110 highlight the divergence in their chaperone-assisted protein folding	7
Exploring liquid-liquid phase separation in the organisation of Golgi matrix proteins	7
Substitution of carbonate by non-physiological synergistic anion modulates the stability and iron release kinetics of serum transferrin	7
The effect of pH and nitrite on the haem pocket of GLB-33, a globin-coupled neuronal transmembrane receptor of Caenorhabditis elegans	7
The molecular basis of the antidepressant action of the magic mushroom extract, psilocin	7
FunPredCATH: An ensemble method for predicting protein function using CATH	7
Evolution in neuropsychiatric cis-regulatory enhancers through human-specific neuronal mutations within transcription factor binding sites	7
Propagation of conformational instability in FK506-binding protein FKBP12	6
Editorial Board	6
Kinetic characterization and thermostability of C. elegans cytoplasmic and mitochondrial malate dehydrogenases	6
Oxygen-carrying proteins employed in blood substitute candidates: differences in interactions with a model antioxidant molecule	6
Crystal structure of the Cys-NO modified YopH tyrosine phosphatase	6
FeoC from Klebsiella pneumoniae uses its iron sulfur cluster to regulate the GTPase activity of the ferrous iron channel	6
The structural basis of conserved residue variant effect on enzyme activity of UGT2B15	6
Investigation on a MMACHC mutant from cblC disease: The c.394C>T variant	5
Immune response pattern across the asymptomatic, symptomatic and convalescent periods of COVID-19	5
The “Wave” of Brazilian proteomics	5
Role of electrostatics in cold adaptation: A comparative study of eury- and stenopsychrophilic triose phosphate isomerase	5
The apo-acyl coenzyme A binding protein of Leishmania major forms a unique ‘AXXA’ motif mediated dimer	5
Corrigendum to “Mass spectrometry analysis of the oxidation states of the pro oncogenic protein anterior gradient-2 reveals covalent dimerization via an intermolecular disulphide bond” [Biochimica et	5
Structure of the Borrelia burgdorferi ATP-dependent metalloprotease FtsH in its functionally relevant hexameric form	5
Editorial Board	5