Current Proteomics

Article	Citations
Identifying Protein Subcellular Location with Embedding Features Learned from Networks	26
Identification of Human Protein Subcellular Location with Multiple Networks	12
Machine Learning-Based Virtual Screening Strategy RevealsSome Natural Compounds as Potential PAK4 Inhibitors in Triple Negative Breast Cancer	9
Subtype Classification by Polymerase and Gag Genes of HIV-1 Iranian Sequences Registered in the NCBI GenBank	5
Isolation, Identification and In Silico Study of Native Cellulase Producing Bacteria	5
The Epidemiological and Pangenome Landscape of Staphylococcus aureus and Identification of Conserved Novel Candidate Vaccine Antigens	5
Protein Aggregation and Self Assembly in Health and Disease	4
Assessment of New E2 Protein Domain Interaction with PKR Protein to Control IFN Signaling	4
Prediction of Prophylactic Peptide Vaccine Candidates for Human Papillomavirus (HPV): Immunoinformatics and Reverse Vaccinology Approaches	4
Curcumin Reverts the Protein Differential Expression in the Liver of the Diabetic Obese db/db Mice	3
Metabolomics of Meat Color: Practical Implications	3
Proteomic Technologies and their Application for Ensuring Meat Quality, Safety and Authenticity	3
Machine Learning for Mass Spectrometry Data Analysis in Proteomics	3
Molecular Cloning and Structural Insights into Pectin Lyase Proteins from Different Strains of Fusarium	3
Association of Mutations in the NS5A-PKRBD Region and IFNL4 Genotypes with Hepatitis C Interferon Responsiveness and its Functional and Structural Analysis	3
A Useful Tool for the Identification of DNA-Binding Proteins Using Graph Convolutional Network	3
Comparative Analysis of Skeleton Muscle Proteome Profile between Yak and Cattle Provides Insight into High-Altitude Adaptation	3
Proteomic Investigations to Assess the Impact of Salinity on Vigna radiata L. Genotypes	2
In Silico Approach for Designing a Novel Recombinant Fusion Protein as a Candidate Vaccine Against HPV	2
Expression Analysis of 4-Hydroxynonenal Modified Proteins in Schizophrenia Brain; Relevance to Involvement in Redox Dysregulation	2
Haptoglobin Polymorphisms and Fucosylation Change: Possible Influence of Variation on the Identified Lung Cancer-relevant Biomarkers	2
Evaluation of the Binding Affinity of a Gonadotropin-Releasing Hormone Analogue (GnRH-a) Buserelin through In silico and In vivo Testing in Clarias magur	2
Analysis of Membrane Proteins of Streptomycin-Resistant Mycobacterium tuberculosis Isolates	2
ABC-Gly: Identifying Protein Lysine Glycation Sites with Artificial Bee Colony Algorithm	2
In Silico Structural and Functional Analysis of Bacillus Uricases	2

Interaction of C-terminal Truncated Beta-amyloid Peptides with Human Serum Albumin	2
Physiological and Biochemical Characteristics of Two Soybean Cultivars with Different Seed Vigor During Seed Physiological Maturity	2
Pathogenesis of Age-Related Cataract: A Systematic Review of Proteomic Studies	2
Heteromerization as a Mechanism Modulating the Affinity of the ACE2 Receptor to the Receptor Binding Domain of SARS-CoV-2 Spike Protein	1
Bioinformatics-Based Characterization of Proteins Related to SARS-CoV- 2 Using the Polarity Index Method® (PIM®) and Intrinsic Disorder Predisposition	1
Current Understanding of Dried Spots Platform for Blood Proteomics	1
Computer-Aided Design of a Novel Poly-Epitope Protein in Fusion with an Adjuvant as a Vaccine Candidate Against Leptospirosis	1
Airway Fibroblast Secretory Products Enhance Cell Migration	1
Neurochemical Changes in the Brain After Fetal Exposure to Fluoxetine, A Serotonin Reuptake Inhibitor (SRI) in Rodents	1
Bioinformatics-based Identification of Proteins Expressed by Arthropod- borne Viruses Transmitted by Aedes Aegypti Mosquito	1
Soy Protein Remnants Digested by Gastro-duodenal Proteases can Alter Microbial Interactions and Intestinal Cholesterol Absorption	1
Cytotoxic and Apoptotic Effect of Iris taochia Plant Extracts on Human Breast Cancer (MCF-7) Cells	1
Comparative Studies on Phospholipase A2 as a Marker for Gut Microbiota- liver-brain Axis in a rodent Model of Autism	1
Higher Abundance of Vitronectin (S-protein) in Serum-derived Exosomes of Pulmonary and Extra-Pulmonary Tuberculosis Patients as Compared to HIV-Tuberculosis Dual-infected Patients and Healthy Humans	1
Proteomic Analysis of Aqueous Humor Proteins Associated with Neovascular Glaucoma Secondary to Proliferative Diabetic Retinopathy	1
Proteomic Analysis of the Vitreous Body in Proliferative and Non-Proliferative Diabetic Retinopathy	1
Analysis of the Non-Specific Binding Proteins in the RNA Pull-Down Experiment	1
Cancer Proteomics: New Horizons and Insights into Therapeutic Applications	1
Integration of Proteomic Data Obtained from the Saliva of Children with Caries through Bioinformatic Analysis	1
Preface	1
Physio-Morphology and Proteomic Attitude of Ziziphus Spina-Christi in Copper-Contaminated Sites in Saudi Arabia: Is It a Candidate Bioremediator?	1
High Altitude Hypoxia	1
Quantitative Proteomic Study of Peripheral Blood Monocytes Identified Novel Genes Involved in Osteoporosis	1
Inhibitory as well as Disaggregation Potential of Selected Hydroxy Benzoic Phytochemicals on Hen Egg-White Lysozyme Amyloidogenesis	1
Prediction of Nitration Sites Based on FCBF Method and Stacking Ensemble Model	1
Proteome Profiling of Serum Exosomes from Newborns Delivered by Mothers with Preeclampsia	1
A Refined Framework for Precision and Translational Proteomics in Clinical Research	1
In Silico Docking Studies of Vascular Endothelial Growth Factor-A (VEGFA): Possible Implications in Chronic Myeloid Leukemia (CML) Therapy	1
Cloning, Expression and Biochemical Characterization of the Recombinant α-amylase from Bacillus subtilis YX48	1
Characterization of Proteins from Putative Human DNA and RNA Viruses	1
Critical Residues in Hsp70 Nucleotide Binding Domain for Challenges in Drug Design	0
Proteomics Analysis of Salt Responsive Proteins in Alfalfa (Medicago sativa L.) Leaves by Two Dimensional Electrophoresis and MALDI-TOF MS.	0
Pilot Study of the Ex Vivo Blood Leukocytes’ Proteomic Response to Prednisone Stimulation in Corticosteroid-responsive Asthma	0
Proteomics and Computational Analysis of Cytosolic Proteome of a Thermoacidophilic Euryarchaeon, Picrophilus torridus	0
Novel Feature Representation and Machine Learning Methods in Computational Proteomics	0
Determination of FGFR1 Functions in Cytarabine Treatment of Acute Myeloid Leukemia Through Bioinformatics Analysis	0
Preface	0
An Immunoinformatic Approach to Designing a Multi-epitope Vaccine against Helicobacter pylori with the VacA Toxin and BabA Adhesion	0
Proteome Profiling of Serum Exosomes from Newborns with Lung Injury after Perinatal Asphyxia	0
Proteomic Study of the Mechanism of Talin-C as an Inhibitor of HIV Infection	0
Meet the Editorial Board Member	0
Predicting and Validating the Mechanism of Action of the Enema Formula in Treating Colorectal Cancer by Using Network Pharmacology, GEO, and TCGA Databases	0
The Efficacy and Safety Analysis of the Bendamustine, Pomalidomide, and Dexamethasone (BPD) Combination Treatment for Patients with Proteasome Inhibitor Intolerance and/or Relapsed Multiple Myeloma	0
Characterization of a New Hypotensive Peptide from the Venom of Snake Bothrops jararaca (Bj)	0
Arsenite Induced Conformational Changes and Aggregation in Human Serum Albumin (HSA) and its Prevention by Naringin	0
Proteomic Analysis of Differentially Expressed Proteins in Mycobacterium Tuberculosis-Infected Macrophages	0
Meet the Editorial Board Member	0
LncRNA SH3BP5-AS1 Regulates the Proliferation and Cell Cycle of Non-Small Cell Lung Cancer Cells	0
Comparative Proteome Profiles of Methicillin-Resistant Staphylococcus aureus in Response to Vanillic Acid and 2-Hydroxycinnamic Acid	0
Meet the Editorial Board Member	0

Plasma Apolipoprotein-AIV Downregulated in Patients with Major Depressive Disorder having Suicidal Ideation Compared to those without Suicidal Ideation	0
The Study of Different Signal Peptides in Improvement of Recombinant Proteins Solubility in E. coli: A Review Article	0
Prediction of Protein Structural Classes: Features Extraction to Classification Algorithm	0
Unraveling Major Proteins of Mycobacterium tuberculosis Envelope	0
Structural Insight into Wild Type of Arginine Deiminase Protein and its Three Mutated Versions in Complex with Arginine Molecule: A Computational Approach	0
Protein Profiling of Hirudo orientalis During Different Seasons for Obtaining Accurate Results in Leech Therapy	0
Mass Spectrometry-Based Label-Free Quantitative Proteomic Analysis of CCl4-Induced Acute Liver Injury in Mice Intervened by Total Glycosides from Ligustri Lucidi Fructus	0
Heavy Metal Stress Tolerance by Serratia nematodiphila sp. MB307: Insights from Mass Spectrometry-based Proteomics	0
Effects of Chronic Cold Exposure on Proteomics of Lung Tissue in Mice	0
Identifying Prostaglandin D2 Synthase in Urine: A Potential Biomarker for Bladder Cancer	0
A Bottom-Up Proteomic Approach in Bone Marrow Plasma Cells of Newly Diagnosed Multiple Myeloma Patients	0
A Motif in Metallopeptidase Inhibitor Decreases Effectively the Activity of Macrophage Metalloproteinases	0
Proteomic Profiling of Maternal Serum for Early Risk Analysis of Preterm Birth	0
Methanol and Sorbitol Affect the Molecular Dynamics of Arginine Deiminase: Insights for Improving its Stability	0
In Silico Analysis of Relative Rareness, Codon Usage, and Enzymesubstrate Docking of Lampyroidea Maculata luciferase	0
Label-Free Mass Spectrometry-Based Plasma Proteomics Identified LY6D, DSC3, CDSN, SERPINB12, and SLURP1 as Novel Protein Biomarkers For Pulmonary Tuberculosis	0
Inflammatory Cytokines Correlate with Dry Eye Indexes Estimated by Keratograph in Healthy Subjects	0
Proteomics of the Skin Secretion of Pulchrana glandulosa (Anura: Ranidae) (Boulenger, 1882), Langkawi Island, Kedah, Peninsular Malaysia	0
Proteomic Analysis of Tumor-specific Biomarkers in Colon Cancer	0
Computational Analysis and Inhibition Study of Carbonic Anhydrase from Azadirachta indica Leaves	0
Proteomic Analysis of Intra- and Extracellular Proteins of Aspergillus Niveus During Submerged Bioprocess Culturing Under Different pH Conditions	0
Comparative Clinical, Proteomic, and Serologic Evaluation in Non-Hospitalized COVID-19 Patients and Healthy Individuals	0
A Complete Sojourn of Monoclonal Antibodies: AI, Rare Diseases / Disorders and Immunotoxic Effects	0
Proteomics, Peptidomics and Transcriptomic Analysis of the Venom from the Spider Macrothele yani (Mygalomorphae: Macrothelidae)	0
RNA-Seq Data Analysis Unveils Potential Conserved Micro-RNAs in Agave Deserti	0
Comparison of the Effects of Different Coating Matrices on Cell Binding and Nitric Oxide-mediated Protein S-nitrosylation in Endothelial Cells under Shear Flow	0
ORF7a Palsies Macrophage to Worsen Diabetes by SMB/BPI/ABC Domains and PARP/Cap/Cyclin Enzyme System	0
The Use of New Omics Techniques for Natural Products to Improve Drug Efficiency and Mechanism	0
Circulating Exosomes Studied by Label-free Proteomics Analysis Reveal Transition Signatures from Diabetes Mellitus to Diabetic Kidney Disease	0
Label-free and TMT-labeled Proteomics Methods to Compare Differences on Normal and Attached Livers of Glyptosternum maculatum	0
Predicting the Secondary Structure of Proteins: A Deep Learning Approach	0
Identification of Potential Drug Targets for Sleep Apnea Through Mendelian Randomization	0
Annotation-Based Study on Hypothetical Proteins in Bacteria Using Classification Features	0
In Silico Vaccine Designing Targeting the Virulence Factors of mce Operons of Mycobacterium avium subsp. Paratuberculosis	0
Effective Inhibition of Mitochondrial Metabolism by Cryptotanshinone in MDA-MB231 cells: A Proteomic Analysis	0
iTRAQ-based Quantitative Proteomic Analysis of Dural Tissues Reveals Upregulated Haptoglobin to be a Potential Biomarker of Moyamoya Disease	0
Preface	0
PCM1: A Potential Prognostic Biomarker Correlated with Immune Infiltration in Lung Adenocarcinoma	0
Impact of Liver Cancer Somatic Mutations on Protein Structures and Functions	0
iTRAQ-Based Quantitative Proteomics Analysis Reveals the Invasion Mechanism of Spiroplasma eriocheiris in 3T6 Cells	0
A Combined Method of Protein Extraction from Unorthodox Plant Samples for Proteomics	0
Unraveling Potential Candidate Targets Associated with Expression of p16INK4a or p16 Truncated Fragment by Comparative Proteomics Analysis	0
Meet the Editorial Board Member	0
Computational Insights into the Structure and Dynamics of the Human Serotonin Transporter N-Terminus by Microsecond Molecular Dynamics	0
Identification of Novel PBP2B Protein Inhibitors against Streptococcus pneumoniae in Marine Natural Products using an In-Silico Approach	0
Knockdown of miR-135a-5p Promotes Mitophagy by Regulating FoxO1/PINK1/Parkin Signaling in Hepatoma Cells Exposed to Oxidative Stress	0
Bioinformatics-Based Identification of Selective Cationic Amphipatic Antibacterial Peptides: Aurein 1.2 Variants Case	0
A Quantitative Proteomic Analysis to Reveal Effects of N-acetylcysteine on H2O2-induced Cytotoxicity	0
Corrigendum to: Cancer Proteomics: New Horizons and Insights into Therapeutic Applications	0
Preface	0
Meet Our Editorial Board Member	0
Quantitative Proteomics Reveals SOS2-Related Proteins in Arabidopsis Under Salt Stress	0
Proteomic Profile Analysis of Pulmonary Artery in a Rat Model Under Hypoxic Pulmonary Hypertension	0
The Relationship of Transposable Elements with Non-Coding RNAs in the Emergence of Human Proteins and Peptides	0
LINC00839, LINC01671, AC093673 and AC008760 are Associated with the Prognosis and Immune Infiltration of Clear-cell Renal Cell Carcinoma	0
Acknowledgements to Reviewers	0
Proteomic Analysis of Early Phosphorylated Proteins in Acute Pancreatitis Model	0
The Effect of N52R Mutation at the SPN-ARR Interface on the Conformational Dynamics of SHANK3	0
Meet the Editorial Board Member	0
Differential Proteomic Identification and Bioinformatics Analysis of Femoral Neck in Elderly Female Patients with Hyperuricaemia	0
Analysis of Oxaliplatin Resistance in Colorectal Cancer Cells by Combined Proteomics and Phosphoproteomic	0
Proteomic Analysis of the Molecular Mechanisms of Chlorpromazine Inhibiting Migration of Oral Squamous Cell Carcinoma	0
StemRegenin-1 Reverses Drug Resistance of MCF-7/ADR Cells via AhR/ABC Transports and AhR/UGTs Pathways	0
Designing a Novel Multi-Epitope Vaccine Against Htlv-1 Related Adult T-cell Leukemia/Lymphoma: An In Silico Approach	0
Meet Our Editorial Board Members	0
Developing Multi-epitope Antigen Construct from Immunodominant Proteins for Serological Diagnosis of Chlamydia trachomatis: An In Silico Approach	0
Identification of Novel Biomarkers for Post-Kasai Portoenterostomy in Biliary Atresia through Shotgun Proteomics Analysis	0
Meet the Editorial Board Member	0
Subcellular Proteomic Analysis Reveals Dysregulation in the Organization of Human A549 Cells Infected with Influenza Virus H7N9	0
Exploring Phytochemical Compounds: A Computational Study for HIV-1 Reverse Transcriptase Inhibition	0
Comparative Proteomic Analysis of Hydrogen Peroxide-Induced Protein Expression in Streptococcus pneumoniae D39	0
In silico Investigation on the Structural Insights into the Binding of Squalamine Inhibitor with Membrane-bound Α-Synuclein	0
Presence of Cathelicidin-1 in Milk as an Indicator of the Severity of Mammary Infection in Ewes	0
iTRAQ-Based Proteomic Analysis of the Rat Pancreas Following Gastric Bypass Surgery	0
Design, Sar, and Metabolism Study of Crucifereae Family Compound (Spirobrassinin) and its Analogs for Antiangiogenic Potential Targeting Hsp90	0
High-Sensitivity C-Reactive Protein and Lipoprotein-Associated Phospholipase A2 in Predicting Recurrence and Severity of Stenosis in Symptomatic Intracranial Atherosclerotic Disease	0
Random Walks on Biomedical Networks	0
Investigating PI3P Binding with Plasmodium Falciparum HSP70 Proteins	0
Unique nCoV-2019 (Covid-19) Spike Glycoprotein Processing by Host Protease: Analysis and Implication on Infection	0
Immunoprotective Potential of Adenylosuccinate Synthetase Protein (PurA) in Streptococcus equi ssp. zooepidemicus Infections	0

RNA Sequencing of A2780 Cells Treated with CCL2 Identified Genes Associated with A2780 Cell Growth	0
Acknowledgements to Reviewers	0
M.P. Molloy	0
Evaluation of the Interaction between Ricin Protein and Quercetin using Different Analytical Methods	0
Osteoarthritis: Insights into Potential Causes and Biomarkers from Articular Fluid Metabonomics	0
In Vitro and In Silico Evaluation of Caffeic and Ferulic Acids Involvement in the Translocation of Glucose Transporter 4	0
A Pan-Cancer Signature For S100A11 - Prognostic And Immunotherapeutic Value	0
Meet the Editorial Board Member	0
A Multi-Method and Structure-Based In Silico Vaccine Designing Against Helicobacter pylori Employing Immuno-Informatics Approach	0
Meet the Editorial Board Member	0
Identification of Potential Immunogenic Epitopes Against SARS-CoV-2 Using In-Silico Method: An Immunoinformatics Study	0
In Silico Evaluation of Various Signal Peptides to Improve Secretion of Humulin Protein in E. coli Host	0
Designing a Novel Multi-epitope Peptide as a Potential Serodiagnosis Marker for the Diagnosis of Acinetobacter baumannii: An In silico Approach	0