Current Proteomics

Article	Citations
S100A8 and S100A9–Critical Mediators of Inflammation in Arthritis	27
Cloning, Expression and Biochemical Characterization of the Recombinant α-amylase from Bacillus subtilis YX48	12
Preface	11
Soy Protein Remnants Digested by Gastro-duodenal Proteases can Alter Microbial Interactions and Intestinal Cholesterol Absorption	7
Pilot Study of the Ex Vivo Blood Leukocytes’ Proteomic Response to Prednisone Stimulation in Corticosteroid-responsive Asthma	6
In Silico Docking Studies of Vascular Endothelial Growth Factor-A (VEGFA): Possible Implications in Chronic Myeloid Leukemia (CML) Therapy	6
Random Walks on Biomedical Networks	6
StemRegenin-1 Reverses Drug Resistance of MCF-7/ADR Cells via AhR/ABC Transports and AhR/UGTs Pathways	5
Proteomic Analysis of the Molecular Mechanisms of Chlorpromazine Inhibiting Migration of Oral Squamous Cell Carcinoma	4
Characterization of a New Hypotensive Peptide from the Venom of Snake Bothrops jararaca (Bj)	4
Identifying Protein Subcellular Location with Embedding Features Learned from Networks	4
Proteomic Analysis of Intra- and Extracellular Proteins of Aspergillus Niveus During Submerged Bioprocess Culturing Under Different pH Conditions	3
The Effect of N52R Mutation at the SPN-ARR Interface on the Conformational Dynamics of SHANK3	3
Acknowledgements to Reviewers	3
Bioinformatics Method Predicts Hantavirus Disrupts Vascular Permeability to Invade Cells Violently by Fibrocystin Hydrolase and PTEN/Gtpase-Like System	3
Proteomics Analysis of Salt Responsive Proteins in Alfalfa (Medicago sativa L.) Leaves by Two Dimensional Electrophoresis and MALDI-TOF MS.	3
LINC00839, LINC01671, AC093673 and AC008760 are Associated with the Prognosis and Immune Infiltration of Clear-cell Renal Cell Carcinoma	3
Prediction of Nitration Sites Based on FCBF Method and Stacking Ensemble Model	3
Identifying Prostaglandin D2 Synthase in Urine: A Potential Biomarker for Bladder Cancer	3
Evaluation of the Binding Affinity of a Gonadotropin-Releasing Hormone Analogue (GnRH-a) Buserelin through In silico and In vivo Testing in Clarias magur	3
Molecular Cloning and Structural Insights into Pectin Lyase Proteins from Different Strains of Fusarium	3
Machine Learning-Based Virtual Screening Strategy RevealsSome Natural Compounds as Potential PAK4 Inhibitors in Triple Negative Breast Cancer	2
miR-124 in Neuroblastoma: Mechanistic Insights, Biomarker Potential, and Therapeutic Prospects	2
Identification of a Ubiquitination‑Related Signature for Ovarian Cancer Based on 101 Combinations of Machine Learning Methods	2
Design, Sar, and Metabolism Study of Crucifereae Family Compound (Spirobrassinin) and its Analogs for Antiangiogenic Potential Targeting Hsp90	2

Agar-Agar Matrix-Mediated Immobilization for Enhanced Catalytic Behavior and Stability of 1,4-α-D-Glucan Glucanohydrolase Obtained from Halotolerant Micrococcus spp. K11	2
Meet the Editorial Board Member	2
Circulating Exosomes Studied by Label-free Proteomics Analysis Reveal Transition Signatures from Diabetes Mellitus to Diabetic Kidney Disease	2
Haptoglobin Polymorphisms and Fucosylation Change: Possible Influence of Variation on the Identified Lung Cancer-relevant Biomarkers	2
Identification of Novel Biomarkers for Post-Kasai Portoenterostomy in Biliary Atresia through Shotgun Proteomics Analysis	2
Inhibitory as well as Disaggregation Potential of Selected Hydroxy Benzoic Phytochemicals on Hen Egg-White Lysozyme Amyloidogenesis	2
RNA Sequencing of A2780 Cells Treated with CCL2 Identified Genes Associated with A2780 Cell Growth	2
Neurochemical Changes in the Brain After Fetal Exposure to Fluoxetine, A Serotonin Reuptake Inhibitor (SRI) in Rodents	1
Analysis of the Non-Specific Binding Proteins in the RNA Pull-Down Experiment	1
PCM1: A Potential Prognostic Biomarker Correlated with Immune Infiltration in Lung Adenocarcinoma	1
Developing Multi-epitope Antigen Construct from Immunodominant Proteins for Serological Diagnosis of Chlamydia trachomatis: An In Silico Approach	1
Computational Insights into the Structure and Dynamics of the Human Serotonin Transporter N-Terminus by Microsecond Molecular Dynamics	1
Proteomics and Computational Analysis of Cytosolic Proteome of a Thermoacidophilic Euryarchaeon, Picrophilus torridus	1
Identification of Novel PBP2B Protein Inhibitors against Streptococcus pneumoniae in Marine Natural Products using an In-Silico Approach	1
Expression Analysis of 4-Hydroxynonenal Modified Proteins in Schizophrenia Brain; Relevance to Involvement in Redox Dysregulation	1
In Vitro and In Silico Evaluation of Caffeic and Ferulic Acids Involvement in the Translocation of Glucose Transporter 4	1
Inflammatory Cytokines Correlate with Dry Eye Indexes Estimated by Keratograph in Healthy Subjects	1
Cancer Proteomics: New Horizons and Insights into Therapeutic Applications	1
Proteomic Analysis of Aqueous Humor Proteins Associated with Neovascular Glaucoma Secondary to Proliferative Diabetic Retinopathy	1
Proteome Profiling of Serum Exosomes from Newborns Delivered by Mothers with Preeclampsia	1
Two Novel Peptides from Buthotus saulcyi Scorpion Venom: Proteomic Analysis and Approaches	1
iTRAQ-Based Proteomic Analysis of the Rat Pancreas Following Gastric Bypass Surgery	1
Cytotoxic and Apoptotic Effect of Iris taochia Plant Extracts on Human Breast Cancer (MCF-7) Cells	1
Comparison of Structural Stability of Monomeric and Dimeric Forms of Bovine Seminal Ribonuclease Using Molecular Dynamics Simulation	1
Pathogenesis of Age-Related Cataract: A Systematic Review of Proteomic Studies	1
Critical Residues in Hsp70 Nucleotide Binding Domain for Challenges in Drug Design	1
A Novel Platform for Protein Post-translational Modifications based on a High-density Antibody Array	1
Comparative Proteomic Analysis of Hydrogen Peroxide-Induced Protein Expression in Streptococcus pneumoniae D39	1
A Bottom-Up Proteomic Approach in Bone Marrow Plasma Cells of Newly Diagnosed Multiple Myeloma Patients	1
NaturePred: A Tool for Revolutionizing Natural Product Classification with Artificial Intelligence	1
In Silico Approach for Designing a Novel Recombinant Fusion Protein as a Candidate Vaccine Against HPV	1
Proteomic Technologies and their Application for Ensuring Meat Quality, Safety and Authenticity	1
Integration of Proteomic Data Obtained from the Saliva of Children with Caries through Bioinformatic Analysis	1
Physio-Morphology and Proteomic Attitude of Ziziphus Spina-Christi in Copper-Contaminated Sites in Saudi Arabia: Is It a Candidate Bioremediator?	1
Structural Insight into Wild Type of Arginine Deiminase Protein and its Three Mutated Versions in Complex with Arginine Molecule: A Computational Approach	1
Evaluation of the Interaction between Ricin Protein and Quercetin using Different Analytical Methods	1
Analysis of Membrane Proteins of Streptomycin-Resistant Mycobacterium tuberculosis Isolates	1
Plasma Apolipoprotein-AIV Downregulated in Patients with Major Depressive Disorder having Suicidal Ideation Compared to those without Suicidal Ideation	0
In silico Investigation on the Structural Insights into the Binding of Squalamine Inhibitor with Membrane-bound Α-Synuclein	0
Bioinformatics-Based Characterization of Proteins Related to SARS-CoV- 2 Using the Polarity Index Method® (PIM®) and Intrinsic Disorder Predisposition	0
Heteromerization as a Mechanism Modulating the Affinity of the ACE2 Receptor to the Receptor Binding Domain of SARS-CoV-2 Spike Protein	0
Proteomic Profiling of Maternal Serum for Early Risk Analysis of Preterm Birth	0
Meet the Editorial Board Member	0
Investigating PI3P Binding with Plasmodium Falciparum HSP70 Proteins	0
Annotation-Based Study on Hypothetical Proteins in Bacteria Using Classification Features	0
Corrigendum to: Cancer Proteomics: New Horizons and Insights into Therapeutic Applications	0
Curcumin Reverts the Protein Differential Expression in the Liver of the Diabetic Obese db/db Mice	0
High Altitude Hypoxia	0
Proteomics of the Skin Secretion of Pulchrana glandulosa (Anura: Ranidae) (Boulenger, 1882), Langkawi Island, Kedah, Peninsular Malaysia	0
H-GWNN: A Population Graph-Based Autism Spectrum Disorders Identification Framework for Tackling Data Heterogeneity	0

Higher Abundance of Vitronectin (S-protein) in Serum-derived Exosomes of Pulmonary and Extra-Pulmonary Tuberculosis Patients as Compared to HIV-Tuberculosis Dual-infected Patients and Healthy Humans	0
Quantitative Proteomics Reveals SOS2-Related Proteins in Arabidopsis Under Salt Stress	0
Proteomic Investigations to Assess the Impact of Salinity on Vigna radiata L. Genotypes	0
ORF7a Palsies Macrophage to Worsen Diabetes by SMB/BPI/ABC Domains and PARP/Cap/Cyclin Enzyme System	0
Differential Proteomic Identification and Bioinformatics Analysis of Femoral Neck in Elderly Female Patients with Hyperuricaemia	0
Meet the Editorial Board Member	0
Decoding Glycobiomarkers in Non-Alcoholic Steatohepatitis (NASH) and Related Hepatocellular Carcinoma (HCC)	0
Protein Aggregation and Self Assembly in Health and Disease	0
Comparative Studies on Phospholipase A2 as a Marker for Gut Microbiota- liver-brain Axis in a rodent Model of Autism	0
Mass Spectrometry-Based Label-Free Quantitative Proteomic Analysis of CCl4-Induced Acute Liver Injury in Mice Intervened by Total Glycosides from Ligustri Lucidi Fructus	0
Comparative Proteome Profiles of Methicillin-Resistant Staphylococcus aureus in Response to Vanillic Acid and 2-Hydroxycinnamic Acid	0
Nanotechnology-Driven Approaches for Targeted Rectal Microbiome Modulation in Gastrointestinal Disorders	0
Acknowledgements to Reviewers	0
Proteomic Analysis of the Vitreous Body in Proliferative and Non-Proliferative Diabetic Retinopathy	0
Molecular Docking, Pharmacophore Mapping, and Virtual Screening of Novel Glucokinase Activators as Antidiabetic Agents	0
A Multi-Method and Structure-Based In Silico Vaccine Designing Against Helicobacter pylori Employing Immuno-Informatics Approach	0
A Pan-Cancer Signature For S100A11 - Prognostic And Immunotherapeutic Value	0
In-silico Analysis of Peroxidase from Raphanus Sativus	0
A Refined Framework for Precision and Translational Proteomics in Clinical Research	0
Analysis of Oxaliplatin Resistance in Colorectal Cancer Cells by Combined Proteomics and Phosphoproteomic	0
Meet the Editorial Board Member	0
The Efficacy and Safety Analysis of the Bendamustine, Pomalidomide, and Dexamethasone (BPD) Combination Treatment for Patients with Proteasome Inhibitor Intolerance and/or Relapsed Multiple Myeloma	0
Meet the Editorial Board Member	0
Identification of Potential Immunogenic Epitopes Against SARS-CoV-2 Using In-Silico Method: An Immunoinformatics Study	0
Comprehensive Analysis of Tertiary Lymphoid Structures in Pancreatic Cancer: Molecular Characteristics and Prognostic Implications	0
Methanol and Sorbitol Affect the Molecular Dynamics of Arginine Deiminase: Insights for Improving its Stability	0
In Silico Structural and Functional Analysis of Bacillus Uricases	0
Comparative Clinical, Proteomic, and Serologic Evaluation in Non-Hospitalized COVID-19 Patients and Healthy Individuals	0
Effective Inhibition of Mitochondrial Metabolism by Cryptotanshinone in MDA-MB231 cells: A Proteomic Analysis	0
The Epidemiological and Pangenome Landscape of Staphylococcus aureus and Identification of Conserved Novel Candidate Vaccine Antigens	0
CovidLLM: A Robust Large Language Model with Missing Value Adaptation and Multi-Objective Learning Strategy for Predicting Disease Severity and Clinical Outcomes in COVID-19 Patients	0
Current Understanding of Dried Spots Platform for Blood Proteomics	0
Meet the Editorial Board Member	0
iTRAQ-Based Quantitative Proteomics Analysis Reveals the Invasion Mechanism of Spiroplasma eriocheiris in 3T6 Cells	0
Immunoprotective Potential of Adenylosuccinate Synthetase Protein (PurA) in Streptococcus equi ssp. zooepidemicus Infections	0
Proteomic Profile Analysis of Pulmonary Artery in a Rat Model Under Hypoxic Pulmonary Hypertension	0
Designing a Novel Multi-Epitope Vaccine Against Htlv-1 Related Adult T-cell Leukemia/Lymphoma: An In Silico Approach	0
Identification of Potential Drug Targets for Sleep Apnea Through Mendelian Randomization	0
The Relationship of Transposable Elements with Non-Coding RNAs in the Emergence of Human Proteins and Peptides	0
Serum Proteomics Reveals Differential Proteins between Individuals with Vestibular Migraine and Healthy Subjects	0
Machine Learning for Mass Spectrometry Data Analysis in Proteomics	0
RNA-Seq Data Analysis Unveils Potential Conserved Micro-RNAs in Agave Deserti	0
An Evolutionary Attributes of OMP33-36 in Acinetobacter baumannii: In silico Based Analysis	0
Proteomics Response of Photosynthetic Machinery to Abiotic Stresses: A Review	0
Proteome Profiling of Serum Exosomes from Newborns with Lung Injury after Perinatal Asphyxia	0
A Motif in Metallopeptidase Inhibitor Decreases Effectively the Activity of Macrophage Metalloproteinases	0
A Combined Method of Protein Extraction from Unorthodox Plant Samples for Proteomics	0
The Use of New Omics Techniques for Natural Products to Improve Drug Efficiency and Mechanism	0
Novel Feature Representation and Machine Learning Methods in Computational Proteomics	0
Unraveling Potential Candidate Targets Associated with Expression of p16INK4a or p16 Truncated Fragment by Comparative Proteomics Analysis	0
Airway Fibroblast Secretory Products Enhance Cell Migration	0
Predicting and Validating the Mechanism of Action of the Enema Formula in Treating Colorectal Cancer by Using Network Pharmacology, GEO, and TCGA Databases	0
LncRNA SH3BP5-AS1 Regulates the Proliferation and Cell Cycle of Non-Small Cell Lung Cancer Cells	0
Characterization of Proteins from Putative Human DNA and RNA Viruses	0
The Study of Different Signal Peptides in Improvement of Recombinant Proteins Solubility in E. coli: A Review Article	0
Impact of Liver Cancer Somatic Mutations on Protein Structures and Functions	0
Molecular Mechanisms of Antiproliferative Effects of Safranal on Cervical Cancer: Evidence from Bioinformatics Analysis	0
Computational Evaluation of Bioactive Compounds from Bryophyllum pinnatum as a Novel GSK3B Inhibitor in Alzheimer's Disease	0
Meet Our Editorial Board Member	0
Interaction of C-terminal Truncated Beta-amyloid Peptides with Human Serum Albumin	0
Arsenite Induced Conformational Changes and Aggregation in Human Serum Albumin (HSA) and its Prevention by Naringin	0
Acknowledgements to Reviewers	0
Designing a Novel Multi-epitope Peptide as a Potential Serodiagnosis Marker for the Diagnosis of Acinetobacter baumannii: An In silico Approach	0
Proteomic Analysis of Tumor-specific Biomarkers in Colon Cancer	0
Preface	0
A Useful Tool for the Identification of DNA-Binding Proteins Using Graph Convolutional Network	0
In silico Analysis of Maize Spermidine Synthase: Detailed Insights from Substrate Docking Studies	0
Comparison of the Effects of Different Coating Matrices on Cell Binding and Nitric Oxide-mediated Protein S-nitrosylation in Endothelial Cells under Shear Flow	0
Effects of Chronic Cold Exposure on Proteomics of Lung Tissue in Mice	0
Meet the Editorial Board Member	0
In Silico Vaccine Designing Targeting the Virulence Factors of mce Operons of Mycobacterium avium subsp. Paratuberculosis	0
In Silico Evaluation of Various Signal Peptides to Improve Secretion of Humulin Protein in E. coli Host	0
High-Sensitivity C-Reactive Protein and Lipoprotein-Associated Phospholipase A2 in Predicting Recurrence and Severity of Stenosis in Symptomatic Intracranial Atherosclerotic Disease	0
Proteomic Study of the Mechanism of Talin-C as an Inhibitor of HIV Infection	0
Study on the Role of Human Gut Microbiome in Controlling MRSA-Induced Sepsis Using Proteomics Tool	0
Integrated Analysis of the Proteome Datasets Using the Assembled Genome Sequence Provides New Insights into the Specialization of Shoots, Stolons, and Rhizomes in Bermudagrass (Cynodon dactylon L.)	0
Bioinformatics-Based Identification of Selective Cationic Amphipatic Antibacterial Peptides: Aurein 1.2 Variants Case	0
In Silico Analysis of Antarctic Rhomboid Proteases (Rho): Unveiling Protein Structure and Evolution	0
Metabolomics of Meat Color: Practical Implications	0
Network Pharmacology and Computational Approach to Explore the Potential Underlying Mechanism of Centella asiatica in the Treatment of Diabetes Mellitus	0

Protein Profiling of Hirudo orientalis During Different Seasons for Obtaining Accurate Results in Leech Therapy	0
Knockdown of miR-135a-5p Promotes Mitophagy by Regulating FoxO1/PINK1/Parkin Signaling in Hepatoma Cells Exposed to Oxidative Stress	0
Investigating the Effectiveness of Natural Analogs and Different Metabolites of Curcumin for the Inhibition of the Influenza Virus Proteins in a Simulated Environment	0
Small Peptides Inhibition of SARS-CoV-2 Mpro via Computational Approaches	0
Quantitative Proteomic Study of Peripheral Blood Monocytes Identified Novel Genes Involved in Osteoporosis	0
Proteomics, Peptidomics and Transcriptomic Analysis of the Venom from the Spider Macrothele yani (Mygalomorphae: Macrothelidae)	0
Determination of FGFR1 Functions in Cytarabine Treatment of Acute Myeloid Leukemia Through Bioinformatics Analysis	0
A Complete Sojourn of Monoclonal Antibodies: AI, Rare Diseases / Disorders and Immunotoxic Effects	0
Assessment of New E2 Protein Domain Interaction with PKR Protein to Control IFN Signaling	0
M.P. Molloy	0
In Silico Analysis of Relative Rareness, Codon Usage, and Enzymesubstrate Docking of Lampyroidea Maculata luciferase	0
Computer-Aided Design of a Novel Poly-Epitope Protein in Fusion with an Adjuvant as a Vaccine Candidate Against Leptospirosis	0
Predicting Membrane Protein Types Based on Fusing Information Feature and Ensemble Machine Learning Model	0
A Quantitative Proteomic Analysis to Reveal Effects of N-acetylcysteine on H2O2-induced Cytotoxicity	0
Meet the Editorial Board Member	0
Predicting the Secondary Structure of Proteins: A Deep Learning Approach	0
Identification of Disease-Protein Associations from a Heterogeneous Network Using Graph Embedding and Sample Screening Algorithms	0
Heavy Metal Stress Tolerance by Serratia nematodiphila sp. MB307: Insights from Mass Spectrometry-based Proteomics	0
An Immunoinformatic Approach to Designing a Multi-epitope Vaccine against Helicobacter pylori with the VacA Toxin and BabA Adhesion	0
Unique nCoV-2019 (Covid-19) Spike Glycoprotein Processing by Host Protease: Analysis and Implication on Infection	0
Subcellular Proteomic Analysis Reveals Dysregulation in the Organization of Human A549 Cells Infected with Influenza Virus H7N9	0
Identification of Potential Necroptosis Inhibitors using Pharmacophore Model: An In-silico Approach	0
Advances in Research on Adropin: Potential Implications for Clinical Diagnosis and Possible Treatment – A Mini-Review	0
Presence of Cathelicidin-1 in Milk as an Indicator of the Severity of Mammary Infection in Ewes	0
AraMultiOmics: A Platform for Generating Multi-Omics Features for Studying Symbiosis in Arabidopsis thaliana and Arbuscular Mycorrhizal Fungi	0
Subtype Classification by Polymerase and Gag Genes of HIV-1 Iranian Sequences Registered in the NCBI GenBank	0
Unraveling Major Proteins of Mycobacterium tuberculosis Envelope	0
Proteomic Analysis of Early Phosphorylated Proteins in Acute Pancreatitis Model	0
Computational Analysis and Inhibition Study of Carbonic Anhydrase from Azadirachta indica Leaves	0
Prediction of Prophylactic Peptide Vaccine Candidates for Human Papillomavirus(HPV): Immunoinformatics and Reverse Vaccinology Approaches	0
Exploring Phytochemical Compounds: A Computational Study for HIV-1 Reverse Transcriptase Inhibition	0
Label-free and TMT-labeled Proteomics Methods to Compare Differences on Normal and Attached Livers of Glyptosternum maculatum	0
Prediction of Protein Structural Classes: Features Extraction to Classification Algorithm	0
Preface	0
Osteoarthritis: Insights into Potential Causes and Biomarkers from Articular Fluid Metabonomics	0
Identification of Human Protein Subcellular Location with Multiple Networks	0