Infection Genetics and Evolution

Article	Citations
Emergence of genomic diversity and recurrent mutations in SARS-CoV-2	632
Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event	466
Genetic diversity and evolution of SARS-CoV-2	455
Recent progress and challenges in drug development against COVID-19 coronavirus (SARS-CoV-2) - an update on the status	215
Novel coronavirus: From discovery to clinical diagnostics	181
From SARS to SARS-CoV-2, insights on structure, pathogenicity and immunity aspects of pandemic human coronaviruses	168
Characterizations of SARS-CoV-2 mutational profile, spike protein stability and viral transmission	160
The role of extracellular vesicles in COVID-19 virus infection	160
Association between ABO blood groups and COVID-19 infection, severity and demise: A systematic review and meta-analysis	140
SARS-CoV-2 and COVID-19: A genetic, epidemiological, and evolutionary perspective	111
Mathematical model of infection kinetics and its analysis for COVID-19, SARS and MERS	109
Genetic evolution analysis of 2019 novel coronavirus and coronavirus from other species	103
Characterization of the emerging B.1.621 variant of interest of SARS-CoV-2	99
Evolutionary dynamics of the SARS-CoV-2 ORF8 accessory gene	94
Identification of potential inhibitors against SARS-CoV-2 by targeting proteins responsible for envelope formation and virion assembly using docking based virtual screening, and pharmacokinetics appro	85
COVID-19: Time to exonerate the pangolin from the transmission of SARS-CoV-2 to humans	76
Coding potential and sequence conservation of SARS-CoV-2 and related animal viruses	72
Impact of I/D polymorphism of angiotensin-converting enzyme 1 (ACE1) gene on the severity of COVID-19 patients	69
Variants in ACE2; potential influences on virus infection and COVID-19 severity	68
Immunoinformatics approach to understand molecular interaction between multi-epitopic regions of SARS-CoV-2 spike-protein with TLR4/MD-2 complex	68
Exploring the genomic and proteomic variations of SARS-CoV-2 spike glycoprotein: A computational biology approach	67
Genetic comparison among various coronavirus strains for the identification of potential vaccine targets of SARS-CoV2	65
Immunoinformatics guided rational design of a next generation multi epitope based peptide (MEBP) vaccine by exploring Zika virus proteome	56
The evolutionary puzzle of Escherichia coli ST131	54
Genetic diversity of Anaplasma bacteria: Twenty years later	54

What is the potential function of microRNAs as biomarkers and therapeutic targets in COVID-19?	53
The dynamic association between COVID-19 and chronic disorders: An updated insight into prevalence, mechanisms and therapeutic modalities	53
From role of gut microbiota to microbial-based therapies in type 2-diabetes	51
Emerging genetic diversity among clinical isolates of SARS-CoV-2: Lessons for today	50
One year into the pandemic: Short-term evolution of SARS-CoV-2 and emergence of new lineages	47
Gene signatures of SARS-CoV/SARS-CoV-2-infected ferret lungs in short- and long-term models	45
Circulating miRNAs: Potential diagnostic role for coronavirus disease 2019 (COVID-19)	44
Pathogenic viruses: Molecular detection and characterization	43
Nonstructural proteins NS7b and NS8 are likely to be phylogenetically associated with evolution of 2019-nCoV	42
Understanding the origin of COVID-19 requires to change the paradigm on zoonotic emergence from the spillover to the circulation model	42
Molecular epidemiology and evolution of Haemophilus influenzae	41
Epidemiology and subtype distribution of Blastocystis in humans: A review	40
E484K as an innovative phylogenetic event for viral evolution: Genomic analysis of the E484K spike mutation in SARS-CoV-2 lineages from Brazil	40
Emerging diversity and ongoing expansion of the genus Brucella	39
Molecular analysis of several in-house rRT-PCR protocols for SARS-CoV-2 detection in the context of genetic variability of the virus in Colombia	37
Virulence and antibiotic resistance plasticity of Arcobacter butzleri: Insights on the genomic diversity of an emerging human pathogen	35
Genome-wide analysis of Indian SARS-CoV-2 genomes for the identification of genetic mutation and SNP	35
SARS-CoV-2 mutation 614G creates an elastase cleavage site enhancing its spread in high AAT-deficient regions	34
The role of microRNAs in modulating SARS-CoV-2 infection in human cells: a systematic review	34
Pre-existing T cell-mediated cross-reactivity to SARS-CoV-2 cannot solely be explained by prior exposure to endemic human coronaviruses	34
High-throughput sequencing (HTS) for the analysis of viral populations	34
Evolving trends of New Delhi Metallo-betalactamse (NDM) variants: A threat to antimicrobial resistance	33
Mannose binding lectin gene 2 (rs1800450) missense variant may contribute to development and severity of COVID-19 infection	33
Characterization of the Rothia spp. and their role in human clinical infections	33
Epidemiology of colistin-resistant, carbapenemase-producing Enterobacteriaceae and Acinetobacter baumannii in Croatia	31
Genetic characterization and pathogenesis of the first H9N2 low pathogenic avian influenza viruses isolated from chickens in Kenyan live bird markets	30
Understanding the B and T cell epitopes of spike protein of severe acute respiratory syndrome coronavirus-2: A computational way to predict the immunogens	30
A survey of genetic variants in SARS-CoV-2 interacting domains of ACE2, TMPRSS2 and TLR3/7/8 across populations	29
Evaluation of haplotype callers for next-generation sequencing of viruses	29
Leptospira spp., a genus in the stage of diversity and genomic data expansion	29
Substitutions in Spike and Nucleocapsid proteins of SARS-CoV-2 circulating in South America	28
Plasmid carrying mcr-9 from an extensively drug-resistant NDM-1-producing Klebsiella quasipneumoniae subsp. quasipneumoniae clinical isolate	28
Clade GR and clade GH isolates of SARS-CoV-2 in Asia show highest amount of SNPs	28
Designing an effective therapeutic siRNA to silence RdRp gene of SARS-CoV-2	27
Sars-CoV-2 and black population: ACE2 as shield or blade?	27
Progress and applications of single-cell sequencing techniques	26
A Sanger-based approach for scaling up screening of SARS-CoV-2 variants of interest and concern	26
ABO blood group-associated susceptibility to norovirus infection: A systematic review and meta-analysis	26
Machine learning predictive model for severe COVID-19	25
Silver nanoparticles offer a synergistic effect with fluconazole against fluconazole-resistant Candida albicans by abrogating drug efflux pumps and increasing endogenous ROS	25
Threat, challenges, and preparedness for future pandemics: A descriptive review of phylogenetic analysis based predictions	25
Association of Vitamin D receptor gene polymorphisms and clinical/severe outcomes of COVID-19 patients	24
Mechanism of eravacycline resistance in Acinetobacter baumannii mediated by a deletion mutation in the sensor kinase adeS, leading to elevated expression of the efflux pump AdeABC	24
A connectivity map-based drug repurposing study and integrative analysis of transcriptomic profiling of SARS-CoV-2 infection	24
Epitope promiscuity and population coverage of Mycobacterium tuberculosis protein antigens in current subunit vaccines under development	23
Population genetics of African Schistosoma species	23
Genetics and evolution of tuberculosis pathogenesis: New perspectives and approaches	23
Prevalence and genetic analysis of porcine circovirus type 2 (PCV2) and type 3 (PCV3) between 2018 and 2020 in central China	23
SARS-CoV-2 genomic surveillance in Costa Rica: Evidence of a divergent population and an increased detection of a spike T1117I mutation	23
MALDI-TOF MS identification of Cimex lectularius and Cimex hemipterus bedbugs	22

Bats are key hosts in the radiation of mammal-associated Bartonella bacteria	22
Metagenomics and artificial intelligence in the context of human health	22
Therapeutic target identification via differential genome analysis of antibiotic resistant Shigella sonnei and inhibitor evaluation against a selected drug target	22
Diversity of Blastocystis subtypes in wild mammals from a zoo and two conservation units in southeastern Brazil	22
Designing of a novel multi-epitope peptide based vaccine against Brugia malayi: An in silico approach	21
New infections by SARS-CoV-2 variants of concern after natural infections and post-vaccination in Rio de Janeiro, Brazil	21
Eltrombopag is a potential target for drug intervention in SARS-CoV-2 spike protein	21
Analyzing host-viral interactome of SARS-CoV-2 for identifying vulnerable host proteins during COVID-19 pathogenesis	21
Molecular epidemiology of leprosy: An update	21
The complete genome sequence of Mycobacterium bovis Mb3601, a SB0120 spoligotype strain representative of a new clonal group	21
Designing efficient multi-epitope peptide-based vaccine by targeting the antioxidant thioredoxin of bancroftian filarial parasite	21
Outcomes of COVID-19: Disparities by ethnicity	21
A systematic review of re-detectable positive virus nucleic acid among COVID-19 patients in recovery phase	21
Carbon fullerene and nanotube are probable binders to multiple targets of SARS-CoV-2: Insights from computational modeling and molecular dynamic simulation studies	21
Ecology, evolution, and epidemiology of zoonotic and vector-borne infectious diseases in French Guiana: Transdisciplinarity does matter to tackle new emerging threats	21
Cytokine storm in tuberculosis and IL-6 involvement	20
A new implication of quasispecies dynamics: Broad virus diversification in absence of external perturbations	20
Decoding the proteome of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) for cell-penetrating peptides involved in pathogenesis or applicable as drug delivery vectors	20
EV-transported microRNAs of Schistosoma mansoni and Fasciola hepatica: Potential targets in definitive hosts	20
Understanding on the possible routes for SARS CoV-2 invasion via ACE2 in the host linked with multiple organs damage	20
Global genomic epidemiology of Streptococcus pyogenes	20
Antimicrobial susceptibility, biofilm formation and genetic profiles of Escherichia coli isolated from retail chicken meat	20
Mycobacterium lepromatosis genome exhibits unusually high CpG dinucleotide content and selection is key force in shaping codon usage	20
Estimation of the global burden of Mycobacterium tuberculosis lineage 1	20
Cryptococcus neoformans: Sex, morphogenesis, and virulence	20
Insect-specific viruses and arboviruses in adult male culicids from Midwestern Brazil	19
Identification and characterization of Jingmen tick virus in rodents from Xinjiang, China	19
Two prolonged viremic SARS-CoV-2 infections with conserved viral genome for two months	19
A review of the molecular epidemiology of Cryptosporidium spp. and Giardia duodenalis in the Middle East and North Africa (MENA) region	19
Comparative genomic provides insight into the virulence and genetic diversity of Vibrio parahaemolyticus associated with shrimp acute hepatopancreatic necrosis disease	19
Ethnic and age-specific acute lung injury/acute respiratory distress syndrome risk associated with angiotensin-converting enzyme insertion/deletion polymorphisms, implications for COVID-19: A meta-ana	19
Clinical outcomes in patients infected with different SARS-CoV-2 variants at one hospital during three phases of the COVID-19 epidemic in Marseille, France	19
Evolution, distribution and genetics of atypical Vibrio cholerae – A review	18
Functional prediction and comparative population analysis of variants in genes for proteases and innate immunity related to SARS-CoV-2 infection	18
Recent progress on the mutations of SARS-CoV-2 spike protein and suggestions for prevention and controlling of the pandemic	18
Global SARS-CoV-2 genomic surveillance: What we have learned (so far)	18
Genomic insights into Brucella	18
The associations of hub gene polymorphisms in PI3K/AKT/mTOR pathway and Schistosomiasis Japonica infection and hepatic fibrosis	18
Novel herpesviruses in neotropical bats and their relationship with other members of the Herpesviridae family	17
Acquired fluoroquinolone resistance genes in corneal isolates of Pseudomonas aeruginosa	17
Genetic diversity analysis of Blastocystis subtypes and their distribution among the domestic animals and pigeons in northwest of Iran	17
Unique constellations of five polymorphic sites of Helicobacter pylori vacA and cagA status associated with risk of gastric cancer	17
Subtractive proteomics and immunoinformatics approaches to explore Bartonella bacilliformis proteome (virulence factors) to design B and T cell multi-epitope subunit vaccine	17
Differential host circRNA expression profiles in human lung epithelial cells infected with SARS-CoV-2	17
SARS-CoV-2 B.1.1.7 lineage rapidly spreads and replaces R.1 lineage in Japan: Serial and stationary observation in a community	17
Evolution and molecular epidemiology of polyomaviruses	17
SARS-CoV-2 Molecular and Phylogenetic analysis in COVID-19 patients: A preliminary report from Iran	17
Genotyping and reassortment analysis of highly pathogenic avian influenza viruses H5N8 and H5N2 from Egypt reveals successive annual replacement of genotypes	17
Deciphering the co-adaptation of codon usage between respiratory coronaviruses and their human host uncovers candidate therapeutics for COVID-19	17
Assessment of basic reproduction number (R0), spatial and temporal epidemiological determinants, and genetic characterization of SARS-CoV-2 in Bangladesh	16
Chemokine receptor gene polymorphisms and COVID-19: Could knowledge gained from HIV/AIDS be important?	16
Liver virome of healthy pigs reveals diverse small ssDNA viral genomes	16
From mice to men: Three cases of human infection with Cryptosporidium ditrichi	16
Coevolutionary forces shaping the fitness of SARS-CoV-2 spike glycoprotein against human receptor ACE2	16
The roles of programmed death ligand 1 in virus-associated cancers	16
Assessment of eugenol inhibitory effect on biofilm formation and biofilm gene expression in methicillin resistant Staphylococcus aureus clinical isolates in Egypt	16
Evolutionary ecology of Lyme Borrelia	16
Prevalence and molecular epidemiology of bovine leukemia virus in Colombian cattle	16
Natural epiestriol-16 act as potential lead molecule against prospective molecular targets of multidrug resistant Acinetobacter baumannii-Insight from in silico modelling and in vitro investigations	16
Molecular epidemiology of infectious bronchitis virus in Poland from 1980 to 2017	16
Role of Fractalkine in promoting inflammation in sepsis-induced multiple organ dysfunction	15
Predictive analysis of COVID-19 eradication with vaccination in India, Brazil, and U.S.A	15
Genome based evolutionary lineage of SARS-CoV-2 towards the development of novel chimeric vaccine	15
Natural and synthetic plant compounds as anti-biofilm agents against Escherichia coli O157:H7 biofilm	15
Two waves of canine distemper virus showing different spatio-temporal dynamics in Alpine wildlife (2006–2018)	15
Comprehensive study based on mtDNA signature (nad1) providing insights on Echinococcus granulosus s.s. genotypes from Pakistan and potential role of buffalo-dog cycle	15
Antibiotic resistance in Vibrio cholerae El Tor strains isolated during cholera complications in Siberia and the Far East of Russia	15
Prevalence of fluoroquinolone-resistant and broad-spectrum cephalosporin-resistant community-acquired urinary tract infections in Rio de Janeiro: Impact of genotypes ST69 and ST131	15
Cefoperazone/sulbactam: New composites against multiresistant gram negative bacteria?	15
Unravelling the genetic diversity and relatedness of Echinococcus multilocularis isolates in Eurasia using the EmsB microsatellite nuclear marker	15
Differences of inflammatory and non-inflammatory indicators in Coronavirus disease-19 (COVID-19) with different severity	15
Longitudinal analysis of SARS-CoV-2 spike and RNA-dependent RNA polymerase protein sequences reveals the emergence and geographic distribution of diverse mutations	15
SARS-CoV-2 spread across the Colombian-Venezuelan border	15
Paired SARS-CoV-2 spike protein mutations observed during ongoing SARS-CoV-2 viral transfer from humans to minks and back to humans	15
Molecular epidemiology and genetic evolution of canine parvovirus in East China, during 2018‐2020	15
Monkeypox virus: The changing facets of a zoonotic pathogen	15
Genome plasticity in Candida albicans: A cutting-edge strategy for evolution, adaptation, and survival	15
Egg transcriptome profile responds to maternal virus infection in honey bees, Apis mellifera	15
Genetic characterization and recombination analysis of atypical porcine pestivirus	15
Enterocytozoon bieneusi genotypes in farmed goats and sheep in Ningxia, China	14

Genetic diversity and virulence characteristics of Helicobacter pylori isolates in different human ethnic groups	14
Phylogeny of the North-Central American clade of blood-sucking reduviid bugs of the tribe Triatomini (Hemiptera: Triatominae) based on the mitochondrial genome	14
Integrated analyses reveal hsa_circ_0028883 as a diagnostic biomarker in active tuberculosis	14
SARS-CoV-2 introduction and lineage dynamics across three epidemic peaks in Southern Brazil: massive spread of P.1	14
Rational design of multimeric based subunit vaccine against Mycoplasma pneumonia: Subtractive proteomics with immunoinformatics framework	14
Epidemiological implications of the genetic diversification of dengue virus (DENV) serotypes and genotypes in Mexico	14
Prezygotic isolation confirms the exclusion of Triatoma melanocephala, T. vitticeps and T. tibiamaculata of the T. brasiliensis subcomplex (Hemiptera, Triatominae)	14
Characterization and phylogenetic properties of the complete mitochondrial genome of Fascioloides jacksoni (syn. Fasciola jacksoni) support the suggested intergeneric change from Fasciola to Fascioloi	14
Association of Apolipoprotein e polymorphism with SARS-CoV-2 infection	14
Association of clade-G SARS-CoV-2 viruses and age with increased mortality rates across 57 countries and India	13
Prevalence and phylogenetic analysis of spike gene of porcine epidemic diarrhea virus in Henan province, China in 2015–2019	13
Discovery of novel Hepatitis C virus inhibitor targeting multiple allosteric sites of NS5B polymerase	13
Molecular characterization of Cachavirus firstly detected in dogs in China	13
Codon usage analysis of zoonotic coronaviruses reveals lower adaptation to humans by SARS-CoV-2	13
Emerging infectious bronchitis virus (IBV) in Egypt: Evidence for an evolutionary advantage of a new S1 variant with a unique gene 3ab constellation	13
Plasmodium infection in Kerteszia cruzii (Diptera: Culicidae) in the Atlantic tropical rain forest, southeastern Brazil	13
Co-harboring of mcr-1 and β-lactamase genes in Pseudomonas aeruginosa by high-resolution melting curve analysis (HRMA): Molecular typing of superbug strains in bloodstream infections (BSI)	13
Genetic susceptibility to severe COVID-19	13
Molecular phylogenetic assessment of the canine parvovirus 2 worldwide and analysis of the genetic diversity and temporal spreading in Brazil	13
Emergence of porcine circovirus 2g (PCV2g) and evidence for recombination between genotypes 2g, 2b and 2d among field isolates from non-vaccinated pigs in Mizoram, India	13
Comparative genome analysis of Corynebacterium species: The underestimated pathogens with high virulence potential	13
Haplorchis pumilio (Trematoda: Heterophyidae) as a new fish-borne zoonotic agent transmitted by Melanoides tuberculata (Mollusca: Thiaridae) in Brazil: A morphological and molecular study	13
Seroprevalence investigation and genetic analysis of pseudorabies virus within pig populations in Henan province of China during 2018–2019	13
Computer aided novel antigenic epitopes selection from the outer membrane protein sequences of Aeromonas hydrophila and its analyses	13
Host range projection of SARS-CoV-2: South Asia perspective	13
Genetic characterization, mechanisms and dissemination risk of antibiotic resistance of multidrug-resistant Rothia nasimurium	13
HIV-1 genetic diversity and recombinant forms among men who have sex with men at a sentinel surveillance site in Xi'an City, China	13
Computational approaches in epitope design using DNA binding proteins as vaccine candidate in Mycobacterium tuberculosis	13
Response regulator GacA and transcriptional activator RhlR proteins involved in biofilm formation of Pseudomonas aeruginosa are prospective targets for natural lead molecules: Computational modelling,	13
Repurposing of SARS-CoV nucleocapsid protein specific nuclease resistant RNA aptamer for therapeutics against SARS-CoV-2	12
Functional analysis of pde gene and its role in the pathogenesis of Xanthomonas oryzae pv. oryzicola	12
The sex and gender dimensions of COVID-19: A narrative review of the potential underlying factors	12
The emergence of hypervirulent blaNDM-1-positive Klebsiella pneumoniae sequence type 395 in an oncology hospital	12
Genetic and antigenic diversity of H7N9 highly pathogenic avian influenza virus in China	12
Effect of hydroxyamines derived from lapachol and norlachol against Staphylococcus aureus strains carrying the NorA efflux pump	12
Introduction and rapid dissemination of SARS-CoV-2 Gamma Variant of Concern in Venezuela	12
Computational design of a potential multi-epitope subunit vaccine using immunoinformatics to fight Ebola virus	12
Bioinformatics features and immunogenic epitopes of Echinococcus granulosus Myophilin as a promising target for vaccination against cystic echinococcosis	12
Analysis of sulphadoxine–pyrimethamine resistance-associated mutations in Plasmodium falciparum isolates obtained from asymptomatic pregnant women in Ogun State, Southwest Nigeria	12
COVID-19 spatiotemporal research with workflow-based data analysis	12
Subtyping bovine viral diarrhea virus (BVDV): Which viral gene to choose?	12
Genetic association of TMPRSS2 rs2070788 polymorphism with COVID-19 case fatality rate among Indian populations	12
A novel metabarcoded 18S ribosomal DNA sequencing tool for the detection of Plasmodium species in malaria positive patients	12
Continuous circulation of an antigenically modified very virulent infectious bursal disease virus for fifteen years in Egypt	12
Genetic diversity and molecular evolution of human adenovirus serotype 41 strains circulating in Beijing, China, during 2010–2019	12
Epidemiology and genotypes of group A rotaviruses in cattle and goats of Bangladesh, 2009-2010	12
Molecular epidemiology and genetic diversity of norovirus infection in children hospitalized with acute gastroenteritis in East Java, Indonesia in 2015–2019	12
‘Candidatus Mycoplasma haematohydrochoerus’, a novel hemoplasma species in capybaras (Hydrochoerus hydrochaeris) from Brazil	12
Evolutionary epidemiology of Streptococcus iniae: Linking mutation rate dynamics with adaptation to novel immunological landscapes	12
Molecular analysis of cryptosporidiosis cases in Western Australia in 2019 and 2020 supports the occurrence of two swimming pool associated outbreaks and reveals the emergence of a rare C. hominis IbA	12
Individual animal and herd level seroprevalence and risk factors of Hepatitis E in ruminants in Jordan	12
Discovery and genetic characterization of a novel orthonairovirus in Ixodes ricinus ticks from Danube Delta	12
Identification of immunodominant epitopes in allelic variants VK210 and VK247 of Plasmodium Vivax Circumsporozoite immunogen	12
Inferring the genetic variability in Indian SARS-CoV-2 genomes using consensus of multiple sequence alignment techniques	12
Investigating the genetic structure of the parasites Anisakis pegreffii and A. berlandi (Nematoda: Anisakidae) in a sympatric area of the southern Pacific Ocean waters using a multilocus genotyping ap	11
Human cytomegalovirus-encoded MicroRNAs: A master regulator of latent infection	11
Genome-wide association studies of COVID-19: Connecting the dots	11
Genetic polymorphisms as multi-biomarkers in severe acute respiratory syndrome (SARS) by coronavirus infection: A systematic review of candidate gene association studies	11
Past and current biological factors affecting malaria in the low transmission setting of Botswana: A review	11
First evidence of local circulation of Plasmodium ovale curtisi and reliability of a malaria rapid diagnostic test among symptomatic outpatients in Douala, Cameroon	11
A novel reassortant clade 2.3.4.4 highly pathogenic avian influenza H5N6 virus identified in South Korea in 2018	11
Analysis of codon usage patterns and influencing factors in rice tungro bacilliform virus	11
Differences in the case fatality risks associated with SARS-CoV-2 Delta and non-Delta variants in relation to vaccine coverage: An early ecological study in the United Kingdom	11
Emergence of ceftriaxone resistant Salmonella enterica serovar Typhi in Eastern India	11
Epidemiological survey of avian adenovirus in China from 2015 to 2021 and the genetic variability of highly pathogenic Fadv-4 isolates	11
Quasi-species nature and differential gene expression of severe acute respiratory syndrome coronavirus 2 and phylogenetic analysis of a novel Iranian strain	11
Detection of three independently-generated DS-1-like G9P[8] reassortant rotavirus A strains during the G9P[8] dominance in Vietnam, 2016–2018	11
Comparative genetic diversity analysis based on virulence and repetitive genes profiling of circulating Pasteurella multocida isolates from animal hosts	11
Low level of genetic diversity and high occurrence of vector-borne protozoa in water buffaloes in Thailand based on 18S ribosomal RNA and mitochondrial cytochrome b genes	11
Reverse and structural vaccinology approach to design a highly immunogenic multi-epitope subunit vaccine against Streptococcus pneumoniae infection	11
Investigation of a rapidly spreading tuberculosis outbreak using whole-genome sequencing	11
Toward integrative ‘omics of the barber’s pole worm and related parasitic nematodes	11
Genetic and codon usage bias analyses of major capsid protein gene in Ranavirus	11
Molecular epidemiological investigation of Mayaro virus in febrile patients from Goiania City, 2017–2018	11
Microsatellite typing of Aedes albopictus (Diptera: Culicidae) populations from Germany suggests regular introductions	11
The determination of gyrA and parC mutations and the prevalence of plasmid-mediated quinolone resistance genes in carbapenem resistant Klebsiella pneumonia ST11 and ST76 strains isolated from patients	11
Predominance of SARS-CoV-2 P.1 (Gamma) lineage inducing the recent COVID-19 wave in southern Brazil and the finding of an additional S: D614A mutation	11
Genotyping of Mycobacterium tuberculosis spreading in Hanoi, Vietnam using conventional and whole genome sequencing methods	11
Prevalence and spectrum of mutations causing G6PD deficiency in Indian populations	11
Molecular and biological characterization of influenza A viruses isolated from human fecal samples	11
Age reduces resistance and tolerance in malaria-infected mice	11
Emergence of unusual rotavirus G9P[4] and G8P[8] strains during post vaccination surveillance in Argentina, 2017–2018	11
Virome of crab-eating (Cerdocyon thous) and pampas foxes (Lycalopex gymnocercus) from southern Brazil and Uruguay	11
Global variation in SARS-CoV-2 proteome and its implication in pre-lockdown emergence and dissemination of 5 dominant SARS-CoV-2 clades	11
Genomic characterization of a novel G3P[10] rotavirus strain from a diarrheic child in Thailand: Evidence for bat-to-human zoonotic transmission	10
Clonal change of carbapenem-resistant Acinetobacter baumannii isolates in a Korean hospital	10
Paramyxoviruses from neotropical bats suggest a novel genus and nephrotropism	10
Evaluation of the usefulness of intermittent preventive treatment of malaria in pregnancy with sulfadoxine-pyrimethamine in a context with increased resistance of Plasmodium falciparum in Kingasani Ho	10
A novel toll-like receptor from Crassostrea gigas is involved in innate immune response to Vibrio alginolyticus	10
Comparison of biofilm production and virulence gene distribution among community- and hospital-acquired Staphylococcus aureus isolates from northwestern Iran	10
Complicated genotypes circulating among treatment naïve HIV-1 patients in Guangzhou, China	10
The autophagy gene ATG16L1 (T300A) variant is associated with the risk and progression of HBV infection	10
Chikungunya phylogeography reveals persistent global transmissions of the Indian Ocean Lineage from India in association with mutational fitness	10
Putative novel B-cell vaccine candidates identified by reverse vaccinology and genomics approaches to control Acinetobacter baumannii serotypes	10
Molecular and pathological screening of canine distemper virus in Asiatic lions, tigers, leopards, snow leopards, clouded leopards, leopard cats, jungle cats, civet cats, fishing cat, and jaguar of di	10