Nature Chemical Biology

Papers
(The median citation count of Nature Chemical Biology is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-03-01 to 2024-03-01.)
ArticleCitations
Plasma membranes are asymmetric in lipid unsaturation, packing and protein shape397
Metabolic determinants of cancer cell sensitivity to canonical ferroptosis inducers328
TRUPATH, an open-source biosensor platform for interrogating the GPCR transducerome276
Selective covalent targeting of GPX4 using masked nitrile-oxide electrophiles224
LYTACs that engage the asialoglycoprotein receptor for targeted protein degradation205
SARS-CoV-2 Mpro inhibitors and activity-based probes for patient-sample imaging205
Rational discovery of molecular glue degraders via scalable chemical profiling192
Targeted glycan degradation potentiates the anticancer immune response in vivo188
m6A-binding YTHDF proteins promote stress granule formation178
Phospholipase iPLA2β averts ferroptosis by eliminating a redox lipid death signal167
Mechanistic dissection of increased enzymatic rate in a phase-separated compartment144
In vitro prototyping and rapid optimization of biosynthetic enzymes for cell design137
Structure- and mechanism-guided design of single fluorescent protein-based biosensors131
A metabolic labeling method detects m6A transcriptome-wide at single base resolution130
Sialic acid-containing glycolipids mediate binding and viral entry of SARS-CoV-2127
Structural and mechanistic insights into 5-lipoxygenase inhibition by natural products125
Accelerated RNA detection using tandem CRISPR nucleases123
Unifying principles of bifunctional, proximity-inducing small molecules122
Deubiquitinase-targeting chimeras for targeted protein stabilization120
Antibody-free enzyme-assisted chemical approach for detection of N6-methyladenosine119
Structural and functional consequences of reversible lipid asymmetry in living membranes118
Programmed genome editing by a miniature CRISPR-Cas12f nuclease116
Electric field stimulates production of highly conductive microbial OmcZ nanowires111
Hydrogel-based biocontainment of bacteria for continuous sensing and computation107
Controlling and enhancing CRISPR systems104
Trivalent PROTACs enhance protein degradation via combined avidity and cooperativity103
A small molecule G6PD inhibitor reveals immune dependence on pentose phosphate pathway98
Pyruvate-responsive genetic circuits for dynamic control of central metabolism89
Formation and functionalization of membraneless compartments in Escherichia coli89
Cholesterol access in cellular membranes controls Hedgehog signaling88
Pharmacologic IRE1/XBP1s activation confers targeted ER proteostasis reprogramming87
Bifunctional small molecules that mediate the degradation of extracellular proteins87
Acoustic biosensors for ultrasound imaging of enzyme activity87
ROS regulated reversible protein phase separation synchronizes plant flowering86
Living materials fabricated via gradient mineralization of light-inducible biofilms85
Single-molecule analysis reveals agonist-specific dimer formation of µ-opioid receptors85
The HaloTag as a general scaffold for far-red tunable chemigenetic indicators83
A widespread role for SLC transmembrane transporters in resistance to cytotoxic drugs81
Discovery of a selective inhibitor of doublecortin like kinase 180
Functional characterization of a PROTAC directed against BRAF mutant V600E80
Bariatric surgery reveals a gut-restricted TGR5 agonist with anti-diabetic effects78
Manumycin polyketides act as molecular glues between UBR7 and P5378
A community resource for paired genomic and metabolomic data mining78
Rerouting plant terpene biosynthesis enables momilactone pathway elucidation76
Metabolic engineering strategies to enable microbial utilization of C1 feedstocks75
The developing toolkit of continuous directed evolution75
Optogenetic control of the lac operon for bacterial chemical and protein production75
A compendium of kinetic modulatory profiles identifies ferroptosis regulators75
Structure and activity of human TMPRSS2 protease implicated in SARS-CoV-2 activation73
Discovery of a first-in-class CDK2 selective degrader for AML differentiation therapy73
Bi-paratopic and multivalent VH domains block ACE2 binding and neutralize SARS-CoV-273
PROTAC-mediated degradation reveals a non-catalytic function of AURORA-A kinase73
Structural basis for diamide modulation of ryanodine receptor72
Hydropersulfides inhibit lipid peroxidation and ferroptosis by scavenging radicals72
NADP modulates RNA m6A methylation and adipogenesis via enhancing FTO activity70
Peroxisome compartmentalization of a toxic enzyme improves alkaloid production70
Sulfopin is a covalent inhibitor of Pin1 that blocks Myc-driven tumors in vivo70
Structure of Erm-modified 70S ribosome reveals the mechanism of macrolide resistance69
Chemically informed analyses of metabolomics mass spectrometry data with Qemistree69
Designer protein assemblies with tunable phase diagrams in living cells67
Cell type-selective secretome profiling in vivo67
The origin of genomic N6-methyl-deoxyadenosine in mammalian cells66
Discovery and resistance mechanism of a selective CDK12 degrader66
Defining new chemical space for drug penetration into Gram-negative bacteria65
Deep mutational scanning reveals the structural basis for α-synuclein activity65
YY1 interacts with guanine quadruplexes to regulate DNA looping and gene expression64
New codons for efficient production of unnatural proteins in a semisynthetic organism63
Hierarchical chemical determination of amyloid polymorphs in neurodegenerative disease63
Plant terpenoid metabolism co-opts a component of the cell wall biosynthesis machinery63
Bottom-up de novo design of functional proteins with complex structural features62
Target protein deglycosylation in living cells by a nanobody-fused split O-GlcNAcase62
Water-processable, biodegradable and coatable aquaplastic from engineered biofilms61
Isoform-selective regulation of mammalian cryptochromes61
Engineering cofactor supply and recycling to drive phenolic acid biosynthesis in yeast61
Engineered ACE2 decoy mitigates lung injury and death induced by SARS-CoV-2 variants61
Strategies for monitoring cell–cell interactions59
Structural insights into probe-dependent positive allosterism of the GLP-1 receptor58
Organelle membrane-specific chemical labeling and dynamic imaging in living cells58
NMR and EPR reveal a compaction of the RNA-binding protein FUS upon droplet formation57
Designer membraneless organelles sequester native factors for control of cell behavior57
Snapshots and ensembles of BTK and cIAP1 protein degrader ternary complexes57
Increasing the efficiency and precision of prime editing with guide RNA pairs56
VCP/p97 regulates Beclin-1-dependent autophagy initiation56
Dissecting the Pol II transcription cycle and derailing cancer with CDK inhibitors55
Programming cell-free biosensors with DNA strand displacement circuits55
Identification of essential sites of lipid peroxidation in ferroptosis55
Sterols in an intramolecular channel of Smoothened mediate Hedgehog signaling55
Ligand recognition and G-protein coupling selectivity of cholecystokinin A receptor54
RNA structure probing uncovers RNA structure-dependent biological functions54
A DNA-based fluorescent probe maps NOS3 activity with subcellular spatial resolution54
Phase separation of RNA-binding protein promotes polymerase binding and transcription54
Genetically encoded protein sulfation in mammalian cells53
An ultrasensitive biosensor for high-resolution kinase activity imaging in awake mice53
PGE1 and PGA1 bind to Nurr1 and activate its transcriptional function52
Comparative tRNA sequencing and RNA mass spectrometry for surveying tRNA modifications52
Structural dissimilarity from self drives neoepitope escape from immune tolerance52
Engineering a precise adenine base editor with minimal bystander editing52
Learning the chemical grammar of biomolecular condensates52
Design of orthogonal regulatory systems for modulating gene expression in plants52
Small molecule probes for targeting autophagy52
Rapid generation of potent antibodies by autonomous hypermutation in yeast51
Covalent inhibition of NSD1 histone methyltransferase51
Adaptive mechanisms of plant specialized metabolism connecting chemistry to function51
Discovery of a NAPE-PLD inhibitor that modulates emotional behavior in mice51
Chromatin as a key consumer in the metabolite economy50
An allosteric modulator binds to a conformational hub in the β2 adrenergic receptor50
Acute pharmacological degradation of Helios destabilizes regulatory T cells50
Bridge helix arginines play a critical role in Cas9 sensitivity to mismatches50
Cuticle thickness affects dynamics of volatile emission from petunia flowers49
Activation of the α2B adrenoceptor by the sedative sympatholytic dexmedetomidine49
KRAS is vulnerable to reversible switch-II pocket engagement in cells49
Biomolecular condensates amplify mRNA decapping by biasing enzyme conformation49
Oncohistone mutations enhance chromatin remodeling and alter cell fates48
Robust direct digital-to-biological data storage in living cells48
ARID2 is a pomalidomide-dependent CRL4CRBN substrate in multiple myeloma cells48
ABHD17 regulation of plasma membrane palmitoylation and N-Ras-dependent cancer growth48
Ribosome stalling during selenoprotein translation exposes a ferroptosis vulnerability47
Targeting androgen receptor phase separation to overcome antiandrogen resistance47
Lipid metabolism in T cell signaling and function45
Computation-guided optimization of split protein systems45
Circularly permuted LOV2 as a modular photoswitch for optogenetic engineering44
Structural basis for RING-Cys-Relay E3 ligase activity and its role in axon integrity44
Chemical acylation of an acquired serine suppresses oncogenic signaling of K-Ras(G12S)44
Orthogonal fluorescent chemogenetic reporters for multicolor imaging43
PRMT inhibition induces a viral mimicry response in triple-negative breast cancer42
Structural basis for non-radical catalysis by TsrM, a radical SAM methylase41
Chemical strategies to overcome resistance against targeted anticancer therapeutics41
Structural basis for selectivity in a highly reducing type II polyketide synthase41
Chains of evidence from correlations to causal molecules in microbiome-linked diseases41
Lineage tracing and analog recording in mammalian cells by single-site DNA writing41
Structural basis of sphingosine-1-phosphate receptor 1 activation and biased agonism41
Repurposing an adenine riboswitch into a fluorogenic imaging and sensing tag41
Tetracenomycin X inhibits translation by binding within the ribosomal exit tunnel41
K29-linked ubiquitin signaling regulates proteotoxic stress response and cell cycle40
The evolution of synthetic receptor systems40
G12/13 is activated by acute tethered agonist exposure in the adhesion GPCR ADGRL340
Engineering AraC to make it responsive to light instead of arabinose40
Characterization of a patient-derived variant of GPX4 for precision therapy40
Conformational rearrangement during activation of a metabotropic glutamate receptor40
Deep learning-guided discovery of an antibiotic targeting Acinetobacter baumannii40
A chemical probe targeting the PWWP domain alters NSD2 nucleolar localization40
Selective G protein signaling driven by substance P–neurokinin receptor dynamics39
Ancient plant-like terpene biosynthesis in corals39
Prospecting for molecular glues39
Dynamics of an LPS translocon induced by substrate and an antimicrobial peptide38
Engineering CAR-T cells to activate small-molecule drugs in situ38
Visualizing a protonated RNA state that modulates microRNA-21 maturation38
Ion channels as lipid sensors: from structures to mechanisms38
Reversible lysine-targeted probes reveal residence time-based kinase selectivity38
Detection of cell–cell interactions via photocatalytic cell tagging38
H2B Lys34 Ubiquitination Induces Nucleosome Distortion to Stimulate Dot1L Activity38
Systematic discovery of biomolecular condensate-specific protein phosphorylation37
Molecular mechanism of allosteric modulation for the cannabinoid receptor CB137
CueR activates transcription through a DNA distortion mechanism37
Selective N-glycan editing on living cell surfaces to probe glycoconjugate function37
Identification of a potent and selective covalent Pin1 inhibitor36
A brief guideline for studies of phase-separated biomolecular condensates36
Spectroscopic coherent Raman imaging of Caenorhabditis elegans reveals lipid particle diversity35
Characterizing the portability of phage-encoded homologous recombination proteins35
Allosteric interactions in the parathyroid hormone GPCR–arrestin complex formation35
Why succinate? Physiological regulation by a mitochondrial coenzyme Q sentinel35
Functional E3 ligase hotspots and resistance mechanisms to small-molecule degraders35
Discovery and biosynthesis of cyclic plant peptides via autocatalytic cyclases35
Insights into distinct signaling profiles of the µOR activated by diverse agonists35
A nucleotide-switch mechanism mediates opposing catalytic activities of Rel enzymes35
Programmable living assembly of materials by bacterial adhesion35
Convergent evolution of bacterial ceramide synthesis34
Reversal of nucleobase methylation by dioxygenases34
Selective inhibitors of JAK1 targeting an isoform-restricted allosteric cysteine34
Target deconvolution of HDAC pharmacopoeia reveals MBLAC2 as common off-target34
Laboratory evolution of a sortase enzyme that modifies amyloid-β protein34
Identification and mechanism of G protein-biased ligands for chemokine receptor CCR134
Widespread occurrence of covalent lysine–cysteine redox switches in proteins33
A bioluminescent probe for longitudinal monitoring of mitochondrial membrane potential33
Using fungible biosensors to evolve improved alkaloid biosyntheses33
Structural insight into the formation of lipoprotein-β-barrel complexes33
Topology-dependent interference of synthetic gene circuit function by growth feedback33
Artificial intelligence foundation for therapeutic science33
Activity-based RNA-modifying enzyme probing reveals DUS3L-mediated dihydrouridylation32
A bio-inspired cell-free system for cannabinoid production from inexpensive inputs32
Crystal structure of human PLD1 provides insight into activation by PI(4,5)P2 and RhoA32
Permissive epigenomes endow reprogramming competence to transcriptional regulators32
Molecular basis for arginine C-terminal degron recognition by Cul2FEM1 E3 ligase32
The conformational cycle of a prototypical voltage-gated sodium channel32
Production of Tyrian purple indigoid dye from tryptophan in Escherichia coli32
Ancient defensive terpene biosynthetic gene clusters in the soft corals32
Combining CRISPRi and metabolomics for functional annotation of compound libraries31
Use of paramagnetic 19F NMR to monitor domain movement in a glutamate transporter homolog31
Cryo-EM structure of the RNA-guided ribonuclease Cas12g31
A proteome-wide map of 20(S)-hydroxycholesterol interactors in cell membranes31
Functional spectrum and specificity of mitochondrial ferredoxins FDX1 and FDX231
Controllable genome editing with split-engineered base editors31
Discovery of small-molecule enzyme activators by activity-based protein profiling31
Genetically encoded multivalent liquid glycan array displayed on M13 bacteriophage31
Glucosylation prevents plant defense activation in phloem-feeding insects30
Prospecting for natural products by genome mining and microcrystal electron diffraction30
A mass spectrometry-based proteome map of drug action in lung cancer cell lines30
Selective inhibitors of mTORC1 activate 4EBP1 and suppress tumor growth30
Modeling the expansion of virtual screening libraries30
Biosynthesis of triacsin featuring an N-hydroxytriazene pharmacophore30
CUL5-ARIH2 E3-E3 ubiquitin ligase structure reveals cullin-specific NEDD8 activation30
Small-molecule inhibitors targeting Polycomb repressive complex 1 RING domain30
YAP-dependent proliferation by a small molecule targeting annexin A229
Targeted degradation via direct 26S proteasome recruitment29
Structure-based investigation of fluorogenic Pepper aptamer29
Precise genome editing across kingdoms of life using retron-derived DNA29
Imaging and targeting LOX-mediated tissue remodeling with a reactive collagen peptide29
Bright and stable luminescent probes for target engagement profiling in live cells29
Engineered LwaCas13a with enhanced collateral activity for nucleic acid detection29
Engineering orthogonal human O-linked glycoprotein biosynthesis in bacteria29
Dynamic crotonylation of EB1 by TIP60 ensures accurate spindle positioning in mitosis29
Enzymatic C–H activation of aromatic compounds through CO2 fixation29
Molecular and environmental determinants of biomolecular condensate formation28
Tools, tactics and objectives to interrogate cellular roles of O-GlcNAc in disease28
p63 uses a switch-like mechanism to set the threshold for induction of apoptosis28
O-GlcNAcylation promotes pancreatic tumor growth by regulating malate dehydrogenase 128
Active turnover of genomic methylcytosine in pluripotent cells28
Spatial decoding of endosomal cAMP signals by a metastable cytoplasmic PKA network28
HIV-1 fusion inhibitors targeting the membrane-proximal external region of Env spikes28
A new dawn beyond lysine ubiquitination28
Palmitoylated acyl protein thioesterase APT2 deforms membranes to extract substrate acyl chains28
Microtubule lattice spacing governs cohesive envelope formation of tau family proteins28
Programmable synthetic biomolecular condensates for cellular control27
Site-specific ubiquitination affects protein energetics and proteasomal degradation27
Mechanical strength of RNA knot in Zika virus protects against cellular defenses27
Membrane phase separation drives responsive assembly of receptor signaling domains27
Drug antagonism and single-agent dominance result from differences in death kinetics27
Atomic structure of potato virus X, the prototype of the Alphaflexiviridae family26
A quantitative method for proteome reallocation using minimal regulatory interventions26
A bifunctional O-antigen polymerase structure reveals a new glycosyltransferase family26
Synthetic protein condensates for cellular and metabolic engineering26
Structures of the human cholecystokinin receptors bound to agonists and antagonists26
Peroxisomal-derived ether phospholipids link nucleotides to respirasome assembly26
Linkage-specific ubiquitin chain formation depends on a lysine hydrocarbon ruler25
Modulation of auxin formation by the cytosolic phenylalanine biosynthetic pathway25
Molecular basis for ubiquitin ligase CRL2FEM1C-mediated recognition of C-degron25
Identifying cell receptors for the nanoparticle protein corona using genome screens25
Reaction pathway engineering converts a radical hydroxylase into a halogenase25
A roadmap to creating ferroptosis-based medicines25
Structural basis for persulfide-sensing specificity in a transcriptional regulator24
Condensation of SEUSS promotes hyperosmotic stress tolerance in Arabidopsis24
Harnessing nanotechnology to expand the toolbox of chemical biology24
HUWE1 employs a giant substrate-binding ring to feed and regulate its HECT E3 domain24
Peroxiredoxins couple metabolism and cell division in an ultradian cycle24
Mutanofactin promotes adhesion and biofilm formation of cariogenic Streptococcus mutans24
Structural and functional diversity among agonist-bound states of the GLP-1 receptor24
Hovlinc is a recently evolved class of ribozyme found in human lncRNA24
Pyridoxal-5′-phosphate-dependent alkyl transfer in nucleoside antibiotic biosynthesis24
Quantitative profiling of pseudouridylation landscape in the human transcriptome24
Engineering site-selective incorporation of fluorine into polyketides23
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