Journal of Chemical Theory and Computation

Papers
(The TQCC of Journal of Chemical Theory and Computation is 11. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-10-01 to 2025-10-01.)
ArticleCitations
Transition Moments for STEOM-CCSD with Core Triples249
Generation of Quantum Configurational Ensembles Using Approximate Potentials223
Permutationally Invariant Fourier Series for Accurate and Robust Data-Driven Many-Body Potentials222
Accelerating Pythonic Coupled-Cluster Implementations: A Comparison Between CPUs and GPUs196
New Local Explorations of the Unitary Coupled Cluster Energy Landscape187
A General Nonbonded Force Field Based on Accurate Quantum Mechanics Calculations for Elements H–La and Hf–Rn164
Pothos: A Python Package for Polymer Chain Orientation and Microstructure Evolution Monitoring150
Implicit Solvent with Explicit Ions Generalized Born Model in Molecular Dynamics: Application to DNA145
Novel Computational Chemistry Infrastructure for Simulating Astatide in Water: From Basis Sets to Force Fields Using Particle Swarm Optimization127
Improving the Efficiency of Variationally Enhanced Sampling with Wavelet-Based Bias Potentials121
Molecular Dynamics of Artificially Pair-Decoupled Systems: An Accurate Tool for Investigating the Importance of Intramolecular Couplings115
Accurate Prediction for Protein–Peptide Binding Based on High-Temperature Molecular Dynamics Simulations114
Hierarchical Machine Learning of Low-Resolution Coarse-Grained Free Energy Potentials112
Chiral Spectroscopy of Bulk Systems with Propagated Localized Orbitals103
Dual-Level Parametrically Managed Neural Network Method for Learning a Potential Energy Surface for Efficient Dynamics100
Residue–Residue Contact Changes during Functional Processes Define Allosteric Communication Pathways93
Reverse Nonequilibrium Molecular Dynamics Simulations of a Melt of Kremer-Grest Type Model under Fast Shear86
modXNA: A Modular Approach to Parametrization of Modified Nucleic Acids for Use with Amber Force Fields85
Efficient Composite Infrared Spectroscopy: Combining the Double-Harmonic Approximation with Machine Learning Potentials82
CHARMM-GUI Nanomaterial Modeler for Modeling and Simulation of Nanomaterial Systems80
Extending Non-Perturbative Simulation Techniques for Open-Quantum Systems to Excited-State Proton Transfer and Ultrafast Non-Adiabatic Dynamics78
Physical Prior Mean-Driven Bayesian Committee Molecular Dynamics (BCMD): From Born–Oppenheimer Dynamics to Curvature-Guided Non-Adiabatic Dynamics78
From Chemical Drawing to Electronic Properties of Semiconducting Polymers in Bulk: A Tool for Chemical Discovery77
Accurate Predictions of Molecular Properties of Proteins via Graph Neural Networks and Transfer Learning76
Double-Hybrid Density Functional Theory for Core Excitations: Theory and Benchmark Calculations75
Integrating Solvent Effects into the Prediction of Kinetic Constants Using a COSMO-Based Equation of State74
From Molecules to Devices: A Multiscale Approach to Evaluating Organic Photovoltaics71
Learning Collective Variables with Synthetic Data Augmentation through Physics-Inspired Geodesic Interpolation69
Spin Dynamics of Radical Pairs Using the Stochastic Schrödinger Equation in MolSpin67
Targeted Transferable Machine-Learned Potential for Linear Alkanes Trained on C14H30 and Tested for C4H10 to C30H6267
Dielectric Properties of Nanoconfined Water from Ab Initio Thermopotentiostat Molecular Dynamics66
New Framework for Computing a General Local Self-Diffusion Coefficient Using Statistical Mechanics66
Exactly Fragment Additive Breakdown of Polarization for Energy Decomposition Analysis Based on the Self-Consistent Field for Molecular Interactions65
Addressing Surface Effects at the Particle-Continuum Interface in a Molecular Dynamics and Finite Elements Coupled Multiscale Simulation Technique62
Strategy toward Kinase-Selective Drug Discovery61
Analyzing Lipid Membrane Defects via a Coarse-Grained to Triangulated Surface Map: The Role of Lipid Order and Local Curvature in Molecular Binding61
Issue Publication Information60
Issue Editorial Masthead59
Issue Publication Information59
Metallicious: Automated Force-Field Parameterization of Covalently Bound Metals for Supramolecular Structures58
Issue Editorial Masthead58
Hydrogen, Oxygen, and Lead Adsorbates on Al13Co4(100): Accurate Potential Energy Surfaces at Low Computational Cost by Machine Learning and DFT-Based Data58
Issue Editorial Masthead58
Nuclear Quantum Effects Made Accessible: Local Density Fitting in Multicomponent Methods56
Single and Multi-Hop Question-Answering Datasets for Reticular Chemistry with GPT-4-Turbo56
Chemoton 2.0: Autonomous Exploration of Chemical Reaction Networks54
Machine Learning Quantum Mechanical/Molecular Mechanical Potentials: Evaluating Transferability in Dihydrofolate Reductase-Catalyzed Reactions54
Modeling the Fluorescence Quantum Yields of Aromatic Compounds: Benchmarking the Machinery to Compute Intersystem Crossing Rates54
Symmetry Breaking Slows Convergence of the ADAPT Variational Quantum Eigensolver54
Scaling Graph Neural Networks to Large Proteins53
Polymer-Unit Graph: Advancing Interpretability in Graph Neural Network Machine Learning for Organic Polymer Semiconductor Materials53
Computing Rates and Understanding Unbinding Mechanisms in Host–Guest Systems53
Allosteric Communication Mediated by Protein Contact Clusters: A Dynamical Model53
The Effective Fragment Molecular Orbital Method: Achieving High Scalability and Accuracy for Large Systems53
On Computing Equilibrium Binding Constants for Protein–Protein Association in Membranes52
Computational Methods in Immunology and Vaccinology: Design and Development of Antibodies and Immunogens51
Theoretical Development of the Interaction-Asymptotic Region Decomposition Method for Tetratomic Reactive Scattering51
Analytical Form of the Fluorescence Correlation Spectroscopy Autocorrelation Function in Chemically Reactive Systems50
Extrapolation Techniques in Database Construction for Machine-Learning Potentials: Achieving Subchemical Accuracy in Sampling Conformal Funnels in Catalytic Processes49
BioStructNet: Structure-Based Network with Transfer Learning for Predicting Biocatalyst Functions49
Harnessing Deep Learning for Optimization of Lennard-Jones Parameters for the Polarizable Classical Drude Oscillator Force Field49
The Dynamic Diversity and Invariance of Ab Initio Water49
Characterization of the Coordination and Solvation Dynamics of Solvated Systems─Implications for the Analysis of Molecular Interactions in Solutions and Pure H2O49
Exploring Biomolecular Conformational Dynamics with Polarizable Force Field AMOEBA and Enhanced Sampling Method Milestoning49
Accelerating Coupled-Cluster Calculations with GPUs: An Implementation of the Density-Fitted CCSD(T) Approach for Heterogeneous Computing Architectures Using OpenMP Directives47
Accurate and Rapid Prediction of Protein pKa: Protein Language Models Reveal the Sequence–pKa Relationship46
First-Principles Simulations of Molecular Optoelectronic Materials: Elementary Excitations and Spatiotemporal Dynamics45
Assessing Nonbonded Aggregates Populations: Application to the Concentration-Dependent IR O–H Band of Phenol45
Computational Approach to Phosphor-Sensitized Fluorescence Based on Monomer Transition Densities44
Many-Body Perturbation Theory with Localized Orbitals: Accounting for Localization Diagrams as Integral Dressing44
Local Resampling Trick for Focused Molecular Dynamics43
GROMACS Stochastic Dynamics and BAOAB Are Equivalent Configurational Sampling Algorithms43
On Sampling Minimum Energy Path43
Enabling Fortran Standard Parallelism in GAMESS for Accelerated Quantum Chemistry Calculations43
Enhanced Twist-Averaging Technique for Magnetic Metals: Applications Using Quantum Monte Carlo43
Benchmarking Aspects of Ab Initio Fragment Models for Accurate Excimer Potential Energy Surfaces43
Three-Center Tight-Binding Together with Multipolar Auxiliary Functions42
Accurate Computation of Thermodynamic Activation Parameters in the Chorismate Mutase Reaction from Empirical Valence Bond Simulations42
Global Optimization of Large Molecular Systems Using Rigid-Body Chain Stochastic Surface Walking42
Impact of Derivative Observations on Gaussian Process Machine Learning Potentials: A Direct Comparison of Three Modeling Approaches42
Frozen Natural Orbitals for the State-Averaged Driven Similarity Renormalization Group41
Reducing Circuit Depth in Adaptive Variational Quantum Algorithms via Effective Hamiltonian Theories41
Efficient Parameterization of Density Functional Tight-Binding for 5f-Elements: A Th–O Case Study41
Unifying Charge-Flow Polarization Models41
On the Validity of Constant pH Simulations40
A Unified Computational Framework for Polymer Self-Consistent Field and Density-Functional Theories40
Quantum Deep Descriptor: Physically Informed Transfer Learning from Small Molecules to Polymers39
Validation of a Coarse-Grained Martini 3 Model for Molecular Oxygen39
Rank-Reduced Equation-of-Motion Coupled Cluster Triples: an Accurate and Affordable Way of Calculating Electronic Excitation Energies39
Fast Approximate but Accurate QM/MM Interactions for Polarizable Embedding39
All-Atom Biomolecular Simulation in the Exascale Era39
Redfield Propagation of Photoinduced Electron Transfer Reactions in Vacuum and Solution38
Gaussian and Non-Gaussian Solvent Density Fluctuations within Solute Cavities in a Water-like Solvent38
Machine-Learning Electron Dynamics with Moment Propagation Theory: Application to Optical Absorption Spectrum Computation Using Real-Time TDDFT37
Approaching the Complete Basis Set Limit for Spin-State Energetics of Mononuclear First-Row Transition Metal Complexes37
Good Vibrations: Calculating Excited-State Frequencies Using Ground-State Self-Consistent Field Models37
A Practical Approach to Wave Function Propagation, Hopping Probabilities, and Time Steps in Surface Hopping Calculations37
Frozen-Core Analytical Gradients within the Adiabatic Connection Random-Phase Approximation from an Extended Lagrangian37
AMUSET-TICA: A Tensor-Based Approach for Identifying Slow Collective Variables in Biomolecular Dynamics37
Issue Publication Information36
Systematic QM Region Construction in QM/MM Calculations Based on Uncertainty Quantification36
Collective Variables and Facilitated Conformational Opening during Translocation of Human Mitochondrial RNA Polymerase (POLRMT) from Atomic Simulations36
Issue Editorial Masthead36
Correction to “The Rosetta All-Atom Energy Function for Macromolecular Modeling and Design”36
Issue Editorial Masthead36
Toward Quantum Chemical Free Energy Simulations of Platinum Nanoparticles on Titania Support36
Halogen Bonding on Water─A Drop in the Ocean?35
Lipid II Binding and Transmembrane Properties of Various Antimicrobial Lanthipeptides35
Quantum–Quantum and Quantum–Quantum-Classical Schemes for Near-Gap Excitations with Projection-Based-Embedded GW-Bethe–Salpeter Equation35
Robust Inversion of Time-Resolved Data via Forward-Optimization in a Trajectory Basis35
Identification of Protein Cryptic Sites via Conformational Dynamics Capturing and Water-Based Pocket Characterization in Molecular Dynamics Simulations35
Roadmap to CCSD(T)-Quality Machine-Learned Potentials for Condensed Phase Simulations35
How the Exchange Energy Can Affect the Power Laws Used to Extrapolate the Coupled Cluster Correlation Energy to the Thermodynamic Limit35
Electronic Polarizability Tunes the Function of the Human Bestrophin 1 Cl Channel35
Comparing the Performance of Different AMBER Protein Forcefields, Partial Charge Assignments, and Water Models for Absolute Binding Free Energy Calculations35
Cavity Quantum Electrodynamics Complete Active Space Configuration Interaction Theory35
Issue Publication Information35
Second-Order Self-Consistent Field Algorithms: From Classical to Quantum Nuclei35
PCMRESP: A Method for Polarizable Force Field Parameter Development and Transferability of the Polarizable Gaussian Multipole Models Across Multiple Solvents34
Physical Prior Mean Function-Driven Gaussian Processes Search for Minimum-Energy Reaction Paths with a Climbing-Image Nudged Elastic Band: A General Method for Gas-Phase, Interfacial, and Bulk-Phase R34
Boosting Graph Neural Networks with Molecular Mechanics: A Case Study of Sigma Profile Prediction34
Replica Exchange Nested Sampling34
Efficient Simulation of Surface-Enhanced Raman Scattering with a Simplified Damped Response Theory34
Self-Assembly of Model Triblock Janus Colloidal Particles in Two Dimensions34
Describing Excited States of Covalently Connected Crystals with Cluster and Embedded Cluster Approaches: Challenges and Solutions34
Machine Learning-Enabled Development of Accurate Force Fields for Refrigerants34
Grid-Context Convolutional Model for Efficient Molecular Surface Construction from Point Clouds34
Fully Dynamic G3W2 Self-Energy for Finite Systems: Formulas and Benchmark34
Effective Reconstruction of Expectation Values from Ab Initio Quantum Embedding33
Coil-Library-Derived Amino-Acid-Specific Side-Chain χ1 Dihedral Angle Potentials for AMBER-Type Protein Force Field33
Optimization of Large Determinant Expansions in Quantum Monte Carlo33
Benchmark Investigation of SCC-DFTB Against Standard DFT to Model Phononic Properties in Two-Dimensional MOFs for Thermoelectric Applications33
Reconstructing Kernel-Based Machine Learning Force Fields with Superlinear Convergence33
Correlation Consistent Basis Sets for Explicitly Correlated Theory: The Transition Metals33
Reduced Radial Curves of Diatomic Molecules33
Implementation of the UNRES/SUGRES-1P Coarse-Grained Model of Heparin for Simulating Protein/Heparin Interactions33
Jahn–Teller Effect on CF3I Photodissociation Dynamics33
Predicting the Color Polymorphism of ROY from a Time-Dependent Optimally Tuned Screened Range-Separated Hybrid Functional33
Rapid, Accurate, Ranking of Protein–Ligand Binding Affinities with VM2, the Second-Generation Mining Minima Method32
Cherry-Picking Resolvents: Recovering the Valence Contribution in X-ray Two-Photon Absorption within the Core–Valence-Separated Equation-of-Motion Coupled-Cluster Response Theory32
Dipolar Cross-Correlations in Aqueous Systems: How Surfaces Influence Water’s Action at a Distance32
Integrated Quantum-Classical Protocol for the Realistic Description of Solvated Multinuclear Mixed-Valence Transition-Metal Complexes and Their Solvatochromic Properties32
Probability Density Reweighting of High-Temperature Molecular Dynamics32
Physics-Inspired Accuracy Estimator for Model-Docked Ligand Complexes32
Discovery of Spin-Crossover Materials with Equivariant Graph Neural Networks and Relevance-Based Classification32
Relativistic Extended-Coupled-Cluster Calculations of P,T-Odd Sensitivity Parameters for Diatomic Molecules32
Representation of Diabatic Potential Energy Matrices for Multiconfiguration Time-Dependent Hartree Treatments of High-Dimensional Nonadiabatic Photodissociation Dynamics32
Analytical Forces for the Optimized Effective Potential Calculations32
Ion Channel Reaction Networks: Dielectric Screening and the Importance of Off-Pathway Flux32
ANI/EFP: Modeling Long-Range Interactions in ANI Neural Network with Effective Fragment Potentials32
Multiscale Simulations to Discover Self-Assembled Oligopeptides: A Benchmarking Study32
Minimum Tracking Linear Response Hubbard and Hund Corrected Density Functional Theory in CP2K32
COCOMO2: A Coarse-Grained Model for Interacting Folded and Disordered Proteins31
CNOT-Efficient Circuits for Arbitrary Rank Many-Body Fermionic and Qubit Excitations31
Theory of Magnetic Properties in Quantum Electrodynamics Environments: Application to Molecular Aromaticity31
Correction to Analytic Linear Vibronic Coupling Method for First-Principles Spin-Dynamics Calculations in Single-Molecule Magnets31
Multimer Embedding Approach for Molecular Crystals up to Harmonic Vibrational Properties31
Reliable Diradical Characterization via Precise Singlet–Triplet Gap Calculations: Application to Thiele, Chichibabin, and Müller Analogous Diradicals31
Power of the Sine Hamiltonian Operator for Estimating the Eigenstate Energies on Quantum Computers31
Combining the Δ-Self-Consistent-Field and GW Methods for Predicting Core Electron Binding Energies in Periodic Solids31
Massively Parallel Free Energy Calculations for In Silico Affinity Maturation of Designed Miniproteins31
LigandDiff: de Novo Ligand Design for 3D Transition Metal Complexes with Diffusion Models31
Exploring the Mechanisms behind Non-aromatic Fluorescence with the Density Functional Tight Binding Method31
Adding the AMBER 14SB Force Field to the Stochastic Titration CpHMD Method30
Transition-Based Constrained DFT for the Robust and Reliable Treatment of Excitations in Supramolecular Systems30
Quantum Perturbation Theory Using Tensor Cores and a Deep Neural Network30
The Embedded Density Matrix Renormalization Group: Size-Extensive and Quasi-Exact for Nonlinear Quantum Chemistry30
Accelerated Convergence of Contracted Quantum Eigensolvers through a Quasi-Second-Order, Locally Parameterized Optimization30
Crystalline and Amorphous Interface Simulations of Donor–Acceptor Blends30
Correction to “Orbital-Optimized Versus Time-Dependent Density Functional Calculations of Intramolecular Charge Transfer Excited States”30
Quantum Simulation of Molecular Response Properties in the NISQ Era30
Understanding Adsorption of Organics on Pt(111) in the Aqueous Phase: Insights from DFT Based Implicit Solvent and Statistical Thermodynamics Models30
Martini 3 OliGo̅mers: A Scalable Approach for Multimers and Fibrils in GROMACS29
Limits on the Precision of Catenane Molecular Motors: Insights from Thermodynamics and Molecular Dynamics Simulations29
Stability, Speed, and Constraints for Structural Coarse-Graining in VOTCA29
De Novo Design of Protein-Binding Peptides by Quantum Computing29
Linear and Nonlinear Optical Properties of Molecules from Real-Time Propagation Based on the Bethe–Salpeter Equation29
Bound-State Relativistic Quantum Electrodynamics: A Perspective for Precision Physics with Atoms and Molecules29
Anharmonic Coupling of Stretching Vibrations in Ice: A Periodic VSCF and VCI Description29
Unsupervisedly Prompting AlphaFold2 for Accurate Few-Shot Protein Structure Prediction29
Benchmark Phaseless Auxiliary-Field Quantum Monte Carlo Method for Small Molecules29
Nonadiabatic Conical Intersection Dynamics in the Local Diabatic Representation with Strang Splitting and Fourier Basis29
Improving Symbolic Regression for Predicting Materials Properties with Iterative Variable Selection29
Exploring Free Energies of Specific Protein Conformations Using the Martini Force Field29
Structurally Constrained Evolutionary Algorithm for the Discovery and Design of Metastable Phases29
Improved Protein Model in SPICA Force Field29
Martini 3 Coarse-Grained Force Field for Cholesterol29
Improving One-Electron Exact-Two-Component Relativistic Methods with the Dirac–Coulomb–Breit-Parameterized Effective Spin–Orbit Coupling28
Optimization of B97-Type Density Functional Approximation, Global Hybrid, and Range-Separated Hybrid Energy Functionals with the D4 Dispersion Corrections in TAO-DFT28
Modeling Fe(II) Complexes Using Neural Networks28
Spin-Symmetry Projected Constrained Unrestricted Hartree–Fock28
Is the Functional Response of a Receptor Determined by the Thermodynamics of Ligand Binding?28
Curvature-Mediated Pair Interactions of Soft Nanoparticles Adhered to a Cell Membrane28
Continuum–Particle Coupling for Polymer Simulations28
Data-Efficient Machine Learning Potentials from Transfer Learning of Periodic Correlated Electronic Structure Methods: Liquid Water at AFQMC, CCSD, and CCSD(T) Accuracy28
Comprehensive Assessment of Force-Field Performance in Molecular Dynamics Simulations of DNA/RNA Hybrid Duplexes28
All-Electron Plane-Wave Electronic Structure Calculations28
Effect of Initial Conditions Sampling on Surface Hopping Simulations in the Ultrashort and Picosecond Time Range. Azomethane Photodissociation as a Case Study28
Practical Post-Kohn–Sham Methods for Time-Reversal Symmetry Breaking References28
Changing Your Martini Can Still Give You a Hangover28
Addressing the Accuracy-Cost Trade-off in Material Property Prediction Using a Teacher-Student Strategy28
Adiabatic and Nonadiabatic Dynamics with Interacting Quantum Trajectories27
Bayesian Approach for Computing Free Energy on Perturbation Graphs with Cycles27
Exploring Chemical Space with Chemistry-Inspired Dynamic Quantum Circuits in the NISQ Era27
Capturing Weak Interactions in Surface Adsorbate Systems at Coupled Cluster Accuracy: A Graph-Theoretic Molecular Fragmentation Approach Improved through Machine Learning27
Third-Order Many-Body Expansion of OSV-MP2 Wave Function for Low-Order Scaling Analytical Gradient Computation27
Extending Conceptual Density Functional Theory toward First-Order Reduced Density Matrices: An Open Subsystems Viewpoint on the Fukui Matrix27
State-Interaction Approach for g-Matrix Calculations in TDDFT: Ground-Excited State Couplings and beyond First-Order Spin–Orbit Effects27
Multiconfigurational SCF and Short-Range DFT Combined with Polarizable Density Embedding: Comparison of Linear-Response and State-Specific Solvatochromic Shifts of Acrolein and Para-nitrophenol27
Efficient Surface Hopping Approach for Modeling Charge Transport in Organic Semiconductors27
Basis-Discretized Surface Hopping for Auger Processes27
Issue Editorial Masthead27
Accurate Prediction of Three-Body Intermolecular Interactions via Electron Deformation Density-Based Machine Learning26
Interconversion of Specific and Equivalent Conductivity of Ions in Electrolyte Solution: Effects of High Ionic Valence and Temperature26
Exploring Alternate Methods for the Calculation of High-Level Vibrational Corrections of NMR Spin–Spin Coupling Constants26
Effective Model Reduction Scheme for the Electronic Structure of Highly Doped Semiconducting Polymers26
Estimating Free-Energy Surfaces and Their Convergence from Multiple, Independent Static and History-Dependent Biased Molecular-Dynamics Simulations with Mean Force Integration26
Issue Editorial Masthead26
Six Months as Editor-in-Chief of JCTC: A Reflection26
Selecting Features for Markov Modeling: A Case Study on HP3526
Synthesis of Hidden Subgroup Quantum Algorithms and Quantum Chemical Dynamics26
Anharmonic Adsorption Free Energies and Apparent Activation Barriers for Mobile Reactants Based on Molecular Dynamics Simulations26
Improving the Potential of Mean Force and Nonequilibrium Pulling Simulations by Simultaneous Alchemical Modifications26
Secondary Conformational Checkpoint in CRISPR-Cas926
Issue Publication Information26
Transfer Learning Facilitates the Prediction of Polymer–Surface Adhesion Strength26
Orbital Mixer: Using Atomic Orbital Features for Basis-Dependent Prediction of Molecular Wavefunctions26
Generating Coupled Cluster Code for Modern Distributed-Memory Tensor Software25
Earth Mover’s Charge Transfer Distance: A General and Robust Approach for Describing Excited State Locality25
Geometry-Corrected Quadratic Optimization Algorithm for NDDO-Descendant Semiempirical Models25
Modeling Realistic Clay Systems with ClayCode25
Solvent-Environment Dependence of the Excess Chemical Potential and Its Computation Scheme Formulated through Error Minimization25
Ligand-Conditioned Side Chain Packing for Flexible Molecular Docking25
Dissipative Particle Dynamics Simulation of Protein Folding in Explicit and Implicit Solvents: Coarse-Grained Model for Atomic Resolution25
Transferable Potential Function for Flexible H2O Molecules Based on the Single-Center Multipole Expansion25
Semiclassical Truncated-Wigner-Approximation Theory of Molecular Vibration-Polariton Dynamics in Optical Cavities25
Solving the Schrödinger Equation in the Configuration Space with Generative Machine Learning25
Assessment of the Second-Order Statically Screened Exchange Correction to the Random Phase Approximation for Correlation Energies25
Reducing the Sampling Complexity of Energy Estimation in Quantum Many-Body Systems Using Empirical Variance Information25
Free Energy Surface and Molecular Mechanism of Slow Structural Transitions in Lipid Bilayers25
A Hybrid Bottom-Up and Data-Driven Machine Learning Approach for Accurate Coarse-Graining of Large Molecular Complexes25
Molecular Free Energies, Rates, and Mechanisms from Data-Efficient Path Sampling Simulations25
Increasing the Realism of in Silico pHLIP Peptide Models with a Novel pH Gradient CpHMD Method25
Nonadiabatic Forward Flux Sampling for Excited-State Rare Events24
Infrared Spectra at Coupled Cluster Accuracy from Neural Network Representations24
Charge-Induced Polarization in Dielectric Particle Systems: A Geometry-Dependent Effect24
The Role of Force Fields and Water Models in Protein Folding and Unfolding Dynamics24
Modeling Concentration-dependent Phase Separation Processes Involving Peptides and RNA via Residue-Based Coarse-Graining24
Accelerating Molecular Dynamics Enrichments of High-Affinity Ligands for Proteins24
Comparison of QM Methods for the Evaluation of Halogen−π Interactions for Large-Scale Data Generation24
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