Nature Structural & Molecular Biology

Papers
(The TQCC of Nature Structural & Molecular Biology is 23. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-08-01 to 2026-08-01.)
ArticleCitations
Celebrating Nature Structural & Molecular Biology’s 30th anniversary635
Surviving under stress conditions256
Dissecting the mechanism of CRISPR–Cas technologies to design efficient biotechnologies151
30 years of structural and molecular biology and counting128
Structure of the HCV glycoprotein125
Author Correction: Polλ promotes microhomology-mediated end-joining122
Publisher Correction: Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane115
Author Correction: Structure of the human K2P13.1 channel reveals a hydrophilic pore restriction and lipid cofactor site109
Structural basis for pre-tRNA recognition and processing by the human tRNA splicing endonuclease complex104
ACAD10 and ACAD11 enable mammalian 4-hydroxy acid lipid catabolism101
Author Correction: Structure and mechanism of antiphage retron Eco299
Charting the 3D regulatory landscape of sex determination with geostatistics98
Structural basis of branching during RNA splicing97
Constitutive activation mechanism of a class C GPCR84
Cryo-EM analysis of complement C3 reveals a reversible major opening of the macroglobulin ring84
Accessible technology for diploid high-order 3D human genome analysis83
Isoform-resolved mRNA profiling of ribosome load defines interplay of HIF and mTOR dysregulation in kidney cancer81
Endocrine resistance and breast cancer plasticity are controlled by CoREST78
Protein import into mitochondria — a new path through the membranes77
A novel class of inhibitors that disrupts the stability of integrin heterodimers identified by CRISPR-tiling-instructed genetic screens76
Gene regulation through exon junction complex modularity74
Shifting our perspective on orphan G protein-coupled receptors73
Yolk transports miRNAs to embryos and enhances progeny stress resilience73
Towards a molecular and structural definition of cell death73
Structural basis of tRNA recognition by the m3C RNA methyltransferase METTL6 in complex with SerRS seryl-tRNA synthetase72
P-type ATPase magnesium transporter MgtA acts as a dimer72
A heterotrimeric protein complex assembles the metazoan V-ATPase upon dissipation of proton gradients70
A PKA inhibitor motif within SMOOTHENED controls Hedgehog signal transduction70
Structural insights into translocation and tailored synthesis of hyaluronan70
Current challenges in understanding the role of enhancers in disease68
Alternative splicing of CARM1 regulated by LincGET-guided paraspeckles biases the first cell fate in mammalian early embryos68
Exploration of novel αβ-protein folds through de novo design68
Uncovering protein glycosylation dynamics and heterogeneity using deep quantitative glycoprofiling (DQGlyco)66
Reduction of DHHC5-mediated beclin 1 S-palmitoylation underlies autophagy decline in aging66
PARylated PDHE1α generates acetyl-CoA for local chromatin acetylation and DNA damage repair66
The Ruminococcus bromii amylosome protein Sas6 binds single and double helical α-glucan structures in starch65
Transcription directionality is licensed by Integrator at active human promoters65
TRIM37 prevents ectopic spindle pole assembly by peptide motif recognition and substrate-dependent oligomerization64
Structures of aberrant spliceosome intermediates on their way to disassembly64
Studying the impact of the nuclear topography on gene function63
Tropomyosin 1-I/C coordinates kinesin-1 and dynein motors during oskar mRNA transport63
A personal perspective of the voltage-gated potassium channel studies61
Cohesin closes the door on coexpression61
Addendum: Retinoic acid signaling is critical during the totipotency window in early mammalian development60
Transcription start site choice diversifies mRNA isoforms and defines cancer cell behavior60
EGOC inhibits TOROID polymerization by structurally activating TORC157
Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM57
Chemical modifications, ions and water molecules in the sub-2 Å resolution structure of the human 80S ribosome57
Checking in on proteostasis57
Better SIFI than sorry57
Author Correction: Cryo-EM structure of an active central apparatus57
Author Correction: Structural basis of the histone ubiquitination read–write mechanism of RYBP–PRC156
MitoPerturb-Seq identifies gene-specific single-cell responses to mitochondrial DNA depletion and heteroplasmy55
Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport55
Structure of adenylyl cyclase 5 in complex with Gβγ offers insights into ADCY5-related dyskinesia55
Smc5/6 silences episomal transcription by a three-step function54
Transcriptional repression upon S phase entry protects genome integrity in pluripotent cells54
MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution53
Understanding ubiquitination in neurodevelopment by integrating insights across space and time52
Author Correction: Structural basis of tRNA recognition by the m3C RNA methyltransferase METTL6 in complex with SerRS seryl-tRNA synthetase52
SCAF1 drives the compositional diversity of mammalian respirasomes51
Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex51
Resolution of R-loops and transcription–replication conflicts by SETX–BRCA1–BARD1 complex51
The conformational landscape of human transthyretin revealed by cryo-EM50
Signal-induced enhancer activation requires Ku70 to read topoisomerase1–DNA covalent complexes50
Comprehensive analysis of Saccharomyces cerevisiae intron structures in vivo50
Cryo-EM structure of the NDH–PSI–LHCI supercomplex from Spinacia oleracea50
Control of transcription elongation and DNA repair by alarmone ppGpp49
DNA methylation restricts coordinated germline and neural fates in embryonic stem cell differentiation49
Function and regulation of the mitochondrial stress response49
cBAF generates subnucleosomes that expand OCT4 binding and function beyond DNA motifs at enhancers49
Deadenylation kinetics of mixed poly(A) tails at single-nucleotide resolution48
THEMIS is a substrate and allosteric activator of SHP1, playing dual roles during T cell development48
A conserved coupling of transcriptional ON and OFF periods underlies bursting dynamics47
Dynamic PRC1–CBX8 stabilizes a porous structure of chromatin condensates47
Structures of transcription preinitiation complex engaged with the +1 nucleosome46
Virtual screen raises hit rate46
Lineage regulators TFAP2C and NR5A2 function as bipotency activators in totipotent embryos46
Thirty years of structural changes46
Direct coupling of human TOM and TIM22 complexes drives mitochondrial carrier import46
Perfect match: PET ligand fits snugly into folded Tau filaments46
Start codon-associated ribosomal frameshifting mediates nutrient stress adaptation45
Transcription and replication meet the silent X chromosome territory45
Guidelines for minimal reporting requirements, design and interpretation of experiments involving the use of eukaryotic dual gene expression reporters (MINDR)45
Transcription modulates chromatin dynamics and locus configuration sampling45
RNA polymerase II depletion from the inactive X chromosome territory is not mediated by physical compartmentalization45
Dynamics of microcompartment formation at the mitosis-to-G1 transition45
Structural basis of hepatitis B virus receptor binding44
Mechanistic basis for PYROXD1-mediated protection of the human tRNA ligase complex against oxidative inactivation43
Functional epigenomics: chromatin complexity untangled43
STING to the lysosome’s rescue43
Finding and recycling stalled spliceosomes43
Architects of the membrane: structures of eukaryotic choline phosphotransferase 1 and choline/ethanolamine phosphotransferase 143
Na+-V-ATPase inhibitor curbs VRE growth and unveils Na+ pathway structure43
All roads lead to MRN regulation at telomeres: different paths to one solution42
Pioneer factor Pax7 initiates two-step cell-cycle-dependent chromatin opening42
Structure and function of the human mitochondrial MRS2 channel42
Transport mechanism of presynaptic high-affinity choline uptake by CHT141
Excited-state observation of active K-Ras reveals differential structural dynamics of wild-type versus oncogenic G12D and G12C mutants41
Condensation of ZFP207 and U1 snRNP promotes spliceosome assembly41
Structural basis for the dynamic chaperoning of disordered clients by Hsp9040
ZBTB16/PLZF regulates juvenile spermatogonial stem cell development through an extensive transcription factor poising network40
Structure and interactions of the endogenous human Commander complex40
Structural plasticity of bacterial ESCRT-III protein PspA in higher-order assemblies40
Chromatin spatial analysis by METALoci unveils sex-determining 3D regulatory hubs39
Structural basis of circularly permuted group II intron self-splicing39
Two dynamically competing factors determine the translation start site39
Structural clues about bridge-mediated lipid transfer39
Structure of a volume-regulated heteromeric LRRC8A/C channel38
Orchestrating nucleic acid–protein interactions at chromosome ends: telomerase mechanisms come into focus38
Structural insights into the iron nitrogenase complex38
A PAR6–aPKC–LGL structure reveals how LGL antagonizes aPKC38
Membrane insertion of mitochondrial-encoded proteins regulates ribosome decoding speed38
Conformational plasticity of human acid-sensing ion channel 1a38
Regulatory activity is the default DNA state in eukaryotes38
MitoPerturb-Seq identifies links between nuclear and mitochondrial genomes in single cells38
Structural insights into the decoding capability of isoleucine tRNAs with lysidine and agmatidine38
Remodeling of maternal mRNA through poly(A) tail orchestrates human oocyte-to-embryo transition38
Mesoscale regulation of microtubule-organizing centers by the E3 ligase TRIM3738
Heritable maintenance of chromatin modifications confers transcriptional memory of interferon-γ signaling38
Hallucination of closed repeat proteins containing central pockets37
Structural basis of MALAT1 RNA maturation and mascRNA biogenesis37
cGAMP-activated cGAS–STING signaling: its bacterial origins and evolutionary adaptation by metazoans37
High-resolution structures of the SARS-CoV-2 N7-methyltransferase inform therapeutic development37
Structure of RAS signaling regulator complex reveals mechanism37
Cooperation of chromatin remodeling SWI/SNF complex and pioneer factor AP-1 shapes 3D enhancer landscapes37
A chromatin mesh model for compaction of chromatin by PRC1 in condensates36
Looking back at 30 years of Nature Structural & Molecular Biology36
Structure and function of a broad-range thermal receptor in myriapods36
Mechanism and reconstitution of circadian transcription in cyanobacteria36
Glycerol mediates crosstalk between metabolism and trafficking through the golgin Imh136
Mechanical disengagement of the cohesin ring36
Ferlin structures36
PARP1 and HPF1 team up to flag down DNA-repair machinery36
Transposable element–gene chimera cartography, origination and role in enhancing transcriptome plasticity36
EMProt improves structure determination from cryo-EM maps35
De novo design of obligate ABC-type heterotrimeric proteins35
Mechanisms for licensing origins of DNA replication in eukaryotic cells35
The structure of the NuA4–Tip60 complex reveals the mechanism and importance of long-range chromatin modification35
The yeast genome is globally accessible in living cells35
Time-course remodeling and pathology intervention of α-synuclein amyloid fibril by heparin and heparin-like oligosaccharides35
A single-vesicle fluorescence microscopy platform to quantify phospholipid scrambling35
Remote on–off switching of protein activity by intrinsically disordered region34
Molecular basis of the TRAP complex function in ER protein biogenesis34
Distinct tau filament folds in human MAPT mutants P301L and P301T34
Catalytic and noncatalytic functions of DNA polymerase κ in translesion DNA synthesis34
Putting numbers on chromatin looping34
Structural basis of pH-dependent activation in a CLC transporter34
A nanobody-based therapeutic targeting Nipah virus limits viral escape34
Actin up: shifting chromosomes toward repair, but also translocations33
Menopause age and cancer risk is influenced by rare genetic variants33
Author Correction: Structural basis for antibody-mediated NMDA receptor clustering and endocytosis in autoimmune encephalitis33
Conformational coupling of redox-driven Na+-translocation in Vibrio cholerae NADH:quinone oxidoreductase33
Replication licensing during S phase: breaking the law to prevent breaking DNA33
Author Correction: The active site of O-GlcNAc transferase imposes constraints on substrate sequence33
Extending guide RNA length restores high-fidelity CRISPR–Cas9 activity33
A rare genetic variant biases maternal meiotic recombination toward risk of pregnancy loss33
Returning home to navigate challenges and meet potential in Poland33
Author Correction: Smc5/6 silences episomal transcription by a three-step function33
Cryo-EM structures of the Spo11 core complex bound to DNA32
How ligands tune the parathyroid hormone receptor’s grip on β-arrestin32
Structural insights into the regulation of Cas7-11 by TPR-CHAT32
The subcortical maternal complex safeguards mouse oocyte-to-embryo transition by preventing nuclear entry of SPIN132
CRISPR–ChIP reveals selective regulation of H3K79me2 by Menin in MLL leukemia32
Genome dilution by cell growth drives starvation-like proteome remodeling in mammalian and yeast cells32
A PRE loop at the dac locus acts as a topological chromatin structure that restricts and specifies enhancer–promoter communication32
Tubulin acetyltransferases access and modify the microtubule luminal K40 residue through anchors in taxane-binding pockets32
The structure of the human 80S ribosome at 1.9 Å resolution reveals the molecular role of chemical modifications and ions in RNA31
Mechanism of mammalian transcriptional repression by noncoding RNA31
Concerted SUMO-targeted ubiquitin ligase activities of TOPORS and RNF4 are essential for stress management and cell proliferation31
Kinetic control of mammalian transcription elongation31
Combinatorial quantification of 5mC and 5hmC at individual CpG dyads and the transcriptome in single cells reveals modulators of DNA methylation maintenance fidelity31
Wide-ranging cellular functions of ion channels and lipid scramblases in the structurally related TMC, TMEM16 and TMEM63 families31
TMEM170 proteins are lipid scramblases associated with bridge-type lipid transporters BLTP1/Csf131
Regulation of kinesin-2 motility by its β-hairpin motif31
Structural inventory of cotranslational protein folding by the eukaryotic RAC complex31
Integrated MINFLUX tracking reveals two distinct chromatin dynamics classes across cell types31
Structural insights into TRPV2 modulation by probenecid31
Mechanism and modeling of human disease-associated near-exon intronic variants that perturb RNA splicing30
How one molecule senses light and temperature30
H4K16ac activates the transcription of transposable elements and contributes to their cis-regulatory function30
Mapping the conformational landscape of the stimulatory heterotrimeric G protein30
Towards a structurally resolved human protein interaction network30
Tau filaments with the Alzheimer fold in human MAPT mutants V337M and R406W30
Cryo-EM reveals how Hsp90 and FKBP immunophilins co-regulate the glucocorticoid receptor30
An egg-ceptional mechanism of acentrosomal spindle assembly29
Neuronal VPS13D loss drives microglial activation29
Structures of complete extracellular receptor assemblies mediated by IL-12 and IL-2329
Structure reveals why genome folding is necessary for site-specific integration of foreign DNA into CRISPR arrays29
Molecular basis for Gβγ-mediated activation of phosphoinositide 3-kinase γ29
Structural basis for CaVα2δ:gabapentin binding29
Structural insights into SV2A and the mechanism of racetam anticonvulsants29
Space exploration: finding new protein conformations using AlphaFold229
Structural landscape of activation, desensitization and inhibition in the human TRPM4 channel29
Structure of the γ-tubulin ring complex-capped microtubule29
A unifying model for membrane protein biogenesis28
Bridge for lipid delivery28
Computational design of sequence-specific DNA-binding proteins28
A conformational switch controlling the toxicity of the prion protein28
Short poly(A) tails are protected from deadenylation by the LARP1–PABP complex28
MAVS deSUMOylation by SENP1 inhibits its aggregation and antagonizes IRF3 activation28
The molecular basis of lamin-specific chromatin interactions28
Resistance of estrogen receptor function to BET bromodomain inhibition is mediated by transcriptional coactivator cooperativity28
A protective ESCRT sleeve for ultrafine DNA bridges27
Visualizing the repair of broken DNA in living cells reveals a new mechanism for DNA homology search27
From atoms to cells27
Caught in the act: how a brake on cell growth is anchored to lysosomes27
Structural basis for retron co-option of anti-phage ATPase-nuclease27
Ebola virus L–VP35 structure27
Efficient selenium use by PRDX6 suppresses iron toxicity and ferroptosis27
A snapshot of proteostasis in human oocytes27
Human primase hangs on the primer–template and Polα to facilitate primer termination27
Insights into stoichiometry and gating of heteromeric LRRC8A–LRRC8C volume-regulated anion channels27
Closing 2025, and a look ahead27
A fine balancing act: how epitranscriptome regulates dosage compensation in mammals27
DNA methyltransferases 3A and 3B target specific sequences during mouse gastrulation26
Structural and mechanistic insights into Streptococcus pneumoniae NADPH oxidase26
Reciprocal stabilization of CtBP and TRIM28 represses autophagy to promote metastasis26
Future opportunities in solute carrier structural biology26
No stasis in proteostasis26
Natural selection finds a way, even under heavy constraints26
Essential protein P116 extracts cholesterol and other indispensable lipids for Mycoplasmas26
Initiation of ERAD by the bifunctional complex of Mnl1/Htm1 mannosidase and protein disulfide isomerase26
The impact of DNA methylation on CTCF-mediated 3D genome organization26
Structural basis of the alkaline pH-dependent activation of insulin receptor-related receptor26
Cracking the case of m7G modification in human tRNAs26
Structural and functional mechanisms of anti-NMDAR autoimmune encephalitis26
Molecular glues that inhibit deubiquitylase activity and inflammatory signaling26
AlphaFold3 takes a step toward decoding molecular behavior and biological computation25
PLA2G2F suppresses ferroptosis through phospholipid remodeling25
Structural basis of the histone ubiquitination read–write mechanism of RYBP–PRC125
Architecture of the ESCPE-1 membrane coat25
The LexA–RecA* structure reveals a cryptic lock-and-key mechanism for SOS activation25
Structure of the preholoproteasome reveals late steps in proteasome core particle biogenesis25
Structural basis of LRPPRC–SLIRP-dependent translation by the mitoribosome25
Building up complexity in structural biology studies25
Membrane-embedded machines25
The RNA world25
An in vivo platform to screen for regulators of Huntington’s disease24
The essential functions of protein SUMOylation in cell proliferation24
GABA transport cycle: beyond a GAT feeling24
Looking back at 202324
Quantitative analysis of transcription start site selection reveals control by DNA sequence, RNA polymerase II activity and NTP levels24
A negative feedback mechanism controls histone gene expression24
Structural basis for membrane remodeling by the AP5–SPG11–SPG15 complex24
A cohesin traffic pattern genetically linked to gene regulation24
Distinct stabilization of the human T cell leukemia virus type 1 immature Gag lattice24
Filament formation and NAD processing by noncanonical human FAM118 sirtuins23
A horizontal gene-transfer-like mechanism in mammalian cells23
Structures of the ribosome bound to EF-Tu–isoleucine tRNA elucidate the mechanism of AUG avoidance23
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