OOIR: Observatory of International Research

Papers

(The H4-Index of IEEE-ACM Transactions on Computational Biology and Bioinformatics is 41. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-05-01 to 2026-05-01.)

Article	Citations
Contrasting Multi-Source Temporal Knowledge Graphs for Biomedical Hypothesis Generation	174
Data-Driven and Knowledge-Based Algorithms for Gene Network Reconstruction on High-Dimensional Data	140
New Labeling Methods for Deep Learning Real-Valued Inter-Residue Distance Prediction	107
Modality-DTA: Multimodality Fusion Strategy for Drug–Target Affinity Prediction	102
ELMo4m6A: A Contextual Language Embedding-Based Predictor for Detecting RNA N6-Methyladenosine Sites	98
scBKAP: A Clustering Model for Single-Cell RNA-Seq Data Based on Bisecting K-Means	93
Graph Convolutional Auto-Encoders for Predicting Novel lncRNA-Disease Associations	82
Analysis of Cancer-Associated Mutations of POLB Using Machine Learning and Bioinformatics	82
VMF-SSD: A Novel V-Space Based Multi-Scale Feature Fusion SSD for Apple Leaf Disease Detection	80
An Effective Swarm Intelligence Optimization Algorithm for Flexible Ligand Docking	79
IPP: An Intelligent Privacy-Preserving Scheme for Detecting Interactions in Genome Association Studies	79
Protein-Protein Interaction Sites Prediction Using Batch Normalization Based CNNs and Oversampling Method Borderline-SMOTE	77
Gene Co-Expression Networks Offer New Perspectives on Sepsis Pathophysiology	76
An Ensemble Tf-Idf Based Approach to Protein Function Prediction via Sequence Segmentation	76
Prediction of Transcription Factor Binding Sites With an Attention Augmented Convolutional Neural Network	63
Prediction of circRNA-MiRNA Association Using Singular Value Decomposition and Graph Neural Networks	63
The Determination of Distinctive Single Nucleotide Polymorphism Sets for the Diagnosis of Behçet's Disease	58
IGNSCDA: Predicting CircRNA-Disease Associations Based on Improved Graph Convolutional Network and Negative Sampling	56
Seq-BEL: Sequence-Based Ensemble Learning for Predicting Virus-Human Protein-Protein Interaction	56
Hybrid Projective Synchronization via PI Controller Based on DNA Strand Displacement	55
Fine-Grained Lesion Classification Framework for Early Auxiliary Diagnosis	55
PseU-KeMRF: A Novel Method for Identifying RNA Pseudouridine Sites	54
Predator: Predicting the Impact of Cancer Somatic Mutations on Protein-Protein Interactions	53
Improving Biomedical Question Answering by Data Augmentation and Model Weighting	51
Subgroup Identification Using Virtual Twins for Human Microbiome Studies	50

SGNet: Sequence-Based Convolution and Ligand Graph Network for Protein Binding Affinity Prediction	49
Blockchain-Based Data Access Security Solutions for Medical Wearables	49
Automated Spot Counting in Microbiology	48
PSPGO: Cross-Species Heterogeneous Network Propagation for Protein Function Prediction	48
Minimum Functional Length Analysis of K-Mer Based on BPNN	47
An Approach of Epistasis Detection Using Integer Linear Programming Optimizing Bayesian Network	47
WVDL: Weighted Voting Deep Learning Model for Predicting RNA-Protein Binding Sites	47
Robust and Privacy-Preserving Decentralized Deep Federated Learning Training: Focusing on Digital Healthcare Applications	46
Spatial Stochastic Model of the Pre-B Cell Receptor	46
A Multi-Task Deep Feature Selection Method for Brain Imaging Genetics	44
RNPredATC: A Deep Residual Learning-Based Model With Applications to the Prediction of Drug-ATC Code Association	43
State Observer Design of Coupled Genetic Regulatory Networks With Reaction-Diffusion Terms via Time-Space Sampled-Data Communications	43
A Neighborhood-Based Global Network Model to Predict Drug-Target Interactions	42
Self-Supervised Learning for Label Sparsity in Computational Drug Repositioning	41
TransCrispr: Transformer Based Hybrid Model for Predicting CRISPR/Cas9 Single Guide RNA Cleavage Efficiency	41
Feature Fusion GAN Based Virtual Staining on Plant Microscopy Images	41
NMTF-DTI: A Nonnegative Matrix Tri-factorization Approach With Multiple Kernel Fusion for Drug-Target Interaction Prediction	41