OOIR: Observatory of International Research

Papers

(The median citation count of Neuroinformatics is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)

Article	Citations
Separating Neural Oscillations from Aperiodic 1/f Activity: Challenges and Recommendations	86
Classification of Contrasting Discrete Emotional States Indicated by EEG Based Graph Theoretical Network Measures	63
Cross-validated Adaboost Classification of Emotion Regulation Strategies Identified by Spectral Coherence in Resting-State	32
A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility	29
TE-HI-GCN: An Ensemble of Transfer Hierarchical Graph Convolutional Networks for Disorder Diagnosis	27
Automated Brain Masking of Fetal Functional MRI with Open Data	27
Automatic Detection of Alzheimer's Disease using Deep Learning Models and Neuro-Imaging: Current Trends and Future Perspectives	27
Is Neuroscience FAIR? A Call for Collaborative Standardisation of Neuroscience Data	26
Scan Once, Analyse Many: Using Large Open-Access Neuroimaging Datasets to Understand the Brain	22
DREAM	20
How Machine Learning is Powering Neuroimaging to Improve Brain Health	20
Federated Analysis of Neuroimaging Data: A Review of the Field	17
Improved Segmentation of the Intracranial and Ventricular Volumes in Populations with Cerebrovascular Lesions and Atrophy Using 3D CNNs	17
Stable Deep Neural Network Architectures for Mitochondria Segmentation on Electron Microscopy Volumes	16
Towards Automated Brain Aneurysm Detection in TOF-MRA: Open Data, Weak Labels, and Anatomical Knowledge	16
Multimodal Autoencoder Predicts fNIRS Resting State From EEG Signals	15
Pandora: 4-D White Matter Bundle Population-Based Atlases Derived from Diffusion MRI Fiber Tractography	15
pyPheWAS: A Phenome-Disease Association Tool for Electronic Medical Record Analysis	14
Deep Learning‐based Classification of Resting‐state fMRI Independent‐component Analysis	14
Multiple Functional Brain Networks Related to Pain Perception Revealed by fMRI	14
A Practical Workflow for Organizing Clinical Intraoperative and Long-term iEEG Data in BIDS	13
RippleNet: a Recurrent Neural Network for Sharp Wave Ripple (SPW-R) Detection	12
Petabyte-Scale Multi-Morphometry of Single Neurons for Whole Brains	12
Promoting FAIR Data Through Community-driven Agile Design: the Open Data Commons for Spinal Cord Injury (odc-sci.org)	12
Federated Analysis in COINSTAC Reveals Functional Network Connectivity and Spectral Links to Smoking and Alcohol Consumption in Nearly 2,000 Adolescent Brains	11

EBRAINS Live Papers - Interactive Resource Sheets for Computational Studies in Neuroscience	11
3dSpAn: An interactive software for 3D segmentation and analysis of dendritic spines	11
Decentralized Multisite VBM Analysis During Adolescence Shows Structural Changes Linked to Age, Body Mass Index, and Smoking: a COINSTAC Analysis	11
Automated Head Tissue Modelling Based on Structural Magnetic Resonance Images for Electroencephalographic Source Reconstruction	9
Generating Longitudinal Atrophy Evaluation Datasets on Brain Magnetic Resonance Images Using Convolutional Neural Networks and Segmentation Priors	9
Towards an Architecture of a Multi-purpose, User-Extendable Reference Human Brain Atlas	8
MEA-ToolBox: an Open Source Toolbox for Standardized Analysis of Multi-Electrode Array Data	8
Chronic Mild Traumatic Brain Injury: Aberrant Static and Dynamic Connectomic Features Identified Through Machine Learning Model Fusion	7
Excavating FAIR Data: the Case of the Multicenter Animal Spinal Cord Injury Study (MASCIS), Blood Pressure, and Neuro-Recovery	7
A Graph-Based Nonlinear Dynamic Characterization of Motor Imagery Toward an Enhanced Hybrid BCI	7
Convolutional Neural Network Based Frameworks for Fast Automatic Segmentation of Thalamic Nuclei from Native and Synthesized Contrast Structural MRI	7
NeuroCrypt: Machine Learning Over Encrypted Distributed Neuroimaging Data	7
Automatic Cerebral Hemisphere Segmentation in Rat MRI with Ischemic Lesions via Attention-based Convolutional Neural Networks	7
Controlling for Spurious Nonlinear Dependence in Connectivity Analyses	7
Transfer, Collection and Organisation of Electrophysiological and Imaging Data for Multicentre Studies	7
Multimodal 3D Mouse Brain Atlas Framework with the Skull-Derived Coordinate System	7
Real-time and Recursive Estimators for Functional MRI Quality Assessment	6
ENIGMA + COINSTAC: Improving Findability, Accessibility, Interoperability, and Re-usability	6
A Comparative Analysis of MRI Automated Segmentation of Subcortical Brain Volumes in a Large Dataset of Elderly Subjects	6
The C-BIG Repository: an Institution-Level Open Science Platform	6
Super-resolution Segmentation Network for Reconstruction of Packed Neurites	6
Analysis of Network Models with Neuron-Astrocyte Interactions	6
Assessing Computational Methods to Quantify Mother-Child Brain Synchrony in Naturalistic Settings Based on fNIRS Signals	5
Confounding Effects on the Performance of Machine Learning Analysis of Static Functional Connectivity Computed from rs-fMRI Multi-site Data	5
Building FAIR Functionality: Annotating Events in Time Series Data Using Hierarchical Event Descriptors (HED)	5
Modelling Cortical Laminar Connectivity in the Macaque Brain	5
Correction to: A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility	5
Correction to: Reproducible Inter-Personal Brain Coupling Measurements in Hyperscanning Settings With functional Near Infra-Red Spectroscopy	5
Comparing Automated Morphology Quantification Software on Dendrites of Uninjured and Injured Drosophila Neurons	5
FAIRSCAPE: a Framework for FAIR and Reproducible Biomedical Analytics	5
RS-FetMRI: a MATLAB-SPM Based Tool for Pre-processing Fetal Resting-State fMRI Data	5
Intelligible Models for HealthCare: Predicting the Probability of 6-Month Unfavorable Outcome in Patients with Ischemic Stroke	5
Predicting Synaptic Connectivity for Large-Scale Microcircuit Simulations Using Snudda	5
The Location Reliability of the Resting-State fMRI FC of Emotional Regions Towards rTMS Therapy	5
Inferring Brain State Dynamics Underlying Naturalistic Stimuli Evoked Emotion Changes With dHA-HMM	5
Deep Learning Methods for Identification of White Matter Fiber Tracts: Review of State-of-the-Art and Future Prospective	5
Auto-encoded Latent Representations of White Matter Streamlines for Quantitative Distance Analysis	4
Pitfalls and Recommended Strategies and Metrics for Suppressing Motion Artifacts in Functional MRI	4
Deconvolution of the Functional Ultrasound Response in the Mouse Visual Pathway Using Block-Term Decomposition	4
Shamo: A Tool for Electromagnetic Modeling, Simulation and Sensitivity Analysis of the Head	4
Reproducible Inter-Personal Brain Coupling Measurements in Hyperscanning Settings With functional Near Infra-Red Spectroscopy	4
A Comprehensive, FAIR File Format for Neuroanatomical Structure Modeling	4
Improving Covariance Matrices Derived from Tiny Training Datasets for the Classification of Event-Related Potentials with Linear Discriminant Analysis	4
Data-Theoretical Synthesis of the Early Developmental Process	4
Cortical Representation of Touch in Silico	4
A Modular Workflow for Model Building, Analysis, and Parameter Estimation in Systems Biology and Neuroscience	4
Altered Connectedness of the Brain Chronnectome During the Progression to Alzheimer’s Disease	4
Editorial: Is Now the Time for Foundational Theory of Brain Connectivity?	4
Integrating Multimodal and Longitudinal Neuroimaging Data with Multi-Source Network Representation Learning	4
Decentralized Brain Age Estimation Using MRI Data	4

nGauge: Integrated and Extensible Neuron Morphology Analysis in Python	4
A Minimum Bayes Factor Based Threshold for Activation Likelihood Estimation	4