OOIR: Observatory of International Research

Papers

(The H4-Index of Molecular & Cellular Proteomics is 37. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)

Article	Citations
Single-cell Proteomics: Progress and Prospects	255
IonQuant Enables Accurate and Sensitive Label-Free Quantification With FDR-Controlled Match-Between-Runs	222
ReactomeGSA - Efficient Multi-Omics Comparative Pathway Analysis	169
A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry–Based Glycoproteomics	143
Proximity Extension Assay in Combination with Next-Generation Sequencing for High-throughput Proteome-wide Analysis	132
The Peptide Vaccine of the Future	120
Decoding Post-Translational Modification Crosstalk With Proteomics	117
Trapped Ion Mobility Spectrometry and Parallel Accumulation–Serial Fragmentation in Proteomics	104
Site-specific N-glycosylation Characterization of Recombinant SARS-CoV-2 Spike Proteins	93
Rapid and In-Depth Coverage of the (Phospho-)Proteome With Deep Libraries and Optimal Window Design for dia-PASEF	83
Quantitative Proteomics Identifies Proteins Enriched in Large and Small Extracellular Vesicles	81
Proteome Turnover in the Spotlight: Approaches, Applications, and Perspectives	79
Recent Advances in Software Tools for More Generic and Precise Intact Glycopeptide Analysis	78
Meta-heterogeneity: Evaluating and Describing the Diversity in Glycosylation Between Sites on the Same Glycoprotein	73
Metabolic Perturbation Associated With COVID-19 Disease Severity and SARS-CoV-2 Replication	72
PTM-Shepherd: Analysis and Summarization of Post-Translational and Chemical Modifications From Open Search Results	71
An Introduction to Advanced Targeted Acquisition Methods	69
Multi-Omics Profiling for Health	68
Sensitive Immunopeptidomics by Leveraging Available Large-Scale Multi-HLA Spectral Libraries, Data-Independent Acquisition, and MS/MS Prediction	62
Real-Time Search-Assisted Acquisition on a Tribrid Mass Spectrometer Improves Coverage in Multiplexed Single-Cell Proteomics	61
Imaging Mass Spectrometry and Lectin Analysis of N-Linked Glycans in Carbohydrate Antigen–Defined Pancreatic Cancer Tissues	61
Recent Advances in Analytical Approaches for Glycan and Glycopeptide Quantitation	60
Proteome Profiling of Recombinant DNase Therapy in Reducing NETs and Aiding Recovery in COVID-19 Patients	57
MS2Rescore: Data-Driven Rescoring Dramatically Boosts Immunopeptide Identification Rates	55
In-depth Site-specific Analysis of N-glycoproteome in Human Cerebrospinal Fluid and Glycosylation Landscape Changes in Alzheimer's Disease	54

Proteomic Landscape of Exosomes Reveals the Functional Contributions of CD151 in Triple-Negative Breast Cancer	49
Interspecies Differences in Proteome Turnover Kinetics Are Correlated With Life Spans and Energetic Demands	47
N-Glycomic Signature of Stage II Colorectal Cancer and Its Association With the Tumor Microenvironment	47
Uncovering the Depths of the Human Proteome: Antibody-based Technologies for Ultrasensitive Multiplexed Protein Detection and Quantification	46
Scaling Up Single-Cell Proteomics	45
Serum Protein Profiling Reveals a Landscape of Inflammation and Immune Signaling in Early-stage COVID-19 Infection	44
The Complexity and Dynamics of the Tissue Glycoproteome Associated With Prostate Cancer Progression	43
An Expanding Repertoire of Protein Acylations	43
The Role of Data-Independent Acquisition for Glycoproteomics	43
Evaluation and Refinement of Sample Preparation Methods for Extracellular Matrix Proteome Coverage	40
Optimized Liquid and Gas Phase Fractionation Increases HLA-Peptidome Coverage for Primary Cell and Tissue Samples	37
Accelerating the Field of Epigenetic Histone Modification Through Mass Spectrometry–Based Approaches	37