OOIR: Observatory of International Research

Papers

(The H4-Index of Molecular & Cellular Proteomics is 39. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-03-01 to 2024-03-01.)

Article	Citations
A Compact Quadrupole-Orbitrap Mass Spectrometer with FAIMS Interface Improves Proteome Coverage in Short LC Gradients	273
Single-cell Proteomics: Progress and Prospects	218
Acquiring and Analyzing Data Independent Acquisition Proteomics Experiments without Spectrum Libraries	160
IonQuant Enables Accurate and Sensitive Label-Free Quantification With FDR-Controlled Match-Between-Runs	159
Fast Quantitative Analysis of timsTOF PASEF Data with MSFragger and IonQuant	142
ReactomeGSA - Efficient Multi-Omics Comparative Pathway Analysis	139
Proximity Dependent Biotinylation: Key Enzymes and Adaptation to Proteomics Approaches	135
MaxQuant Software for Ion Mobility Enhanced Shotgun Proteomics	125
DEqMS: A Method for Accurate Variance Estimation in Differential Protein Expression Analysis	122
An Improved Boosting to Amplify Signal with Isobaric Labeling (iBASIL) Strategy for Precise Quantitative Single-cell Proteomics	119
A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry–Based Glycoproteomics	114
The Peptide Vaccine of the Future	93
Decoding Post-Translational Modification Crosstalk With Proteomics	89
MSstatsTMT: Statistical Detection of Differentially Abundant Proteins in Experiments with Isobaric Labeling and Multiple Mixtures	86
Site-specific N-glycosylation Characterization of Recombinant SARS-CoV-2 Spike Proteins	86
Trapped Ion Mobility Spectrometry and Parallel Accumulation–Serial Fragmentation in Proteomics	82
Data, Reagents, Assays and Merits of Proteomics for SARS-CoV-2 Research and Testing	77
Proximity Extension Assay in Combination with Next-Generation Sequencing for High-throughput Proteome-wide Analysis	74
Recent Advances in Software Tools for More Generic and Precise Intact Glycopeptide Analysis	68
Metabolic Perturbation Associated With COVID-19 Disease Severity and SARS-CoV-2 Replication	63
Proteome Turnover in the Spotlight: Approaches, Applications, and Perspectives	62
Meta-heterogeneity: Evaluating and Describing the Diversity in Glycosylation Between Sites on the Same Glycoprotein	58
Imaging Mass Spectrometry and Lectin Analysis of N-Linked Glycans in Carbohydrate Antigen–Defined Pancreatic Cancer Tissues	53
PTM-Shepherd: Analysis and Summarization of Post-Translational and Chemical Modifications From Open Search Results	52
Recent Advances in Analytical Approaches for Glycan and Glycopeptide Quantitation	52

Changes in the Oligodendrocyte Progenitor Cell Proteome with Ageing	51
An Introduction to Advanced Targeted Acquisition Methods	51
Proteome Profiling of Recombinant DNase Therapy in Reducing NETs and Aiding Recovery in COVID-19 Patients	50
Quantitative Proteomics Identifies Proteins Enriched in Large and Small Extracellular Vesicles	47
Rapid and In-Depth Coverage of the (Phospho-)Proteome With Deep Libraries and Optimal Window Design for dia-PASEF	47
In-depth Site-specific Analysis of N-glycoproteome in Human Cerebrospinal Fluid and Glycosylation Landscape Changes in Alzheimer's Disease	46
Sensitive Immunopeptidomics by Leveraging Available Large-Scale Multi-HLA Spectral Libraries, Data-Independent Acquisition, and MS/MS Prediction	45
Accurate MS-based Rab10 Phosphorylation Stoichiometry Determination as Readout for LRRK2 Activity in Parkinson's Disease	44
Serum Protein Profiling Reveals a Landscape of Inflammation and Immune Signaling in Early-stage COVID-19 Infection	42
Developments and Applications of Functional Protein Microarrays	42
N-Glycomic Signature of Stage II Colorectal Cancer and Its Association With the Tumor Microenvironment	41
Real-Time Search-Assisted Acquisition on a Tribrid Mass Spectrometer Improves Coverage in Multiplexed Single-Cell Proteomics	41
Large-scale Identification of N-linked Intact Glycopeptides in Human Serum using HILIC Enrichment and Spectral Library Search	40
Phenotypic Adaption of Pseudomonas aeruginosa by Hacking Siderophores Produced by Other Microorganisms	39
The Complexity and Dynamics of the Tissue Glycoproteome Associated With Prostate Cancer Progression	39