OOIR: Observatory of International Research

Papers

(The H4-Index of Molecular & Cellular Proteomics is 33. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-11-01 to 2025-11-01.)

Article	Citations
CellEKT: A Robust Chemical Proteomics Workflow to Profile Cellular Target Engagement of Kinase Inhibitors	230
NovoBoard: A Comprehensive Framework for Evaluating the False Discovery Rate and Accuracy of De Novo Peptide Sequencing	188
Quantitative Proteomic Analysis Reveals Functional Alterations of the Peripheral Immune System in Colorectal Cancer	142
Exploring the Early Molecular Pathogenesis of Osteoarthritis Using Differential Network Analysis of Human Synovial Fluid	102
Employing Expression-Matched Controls Enables High-Confidence Proximity-Based Interactome Classification	93
Integrative Proteogenomics for Differential Expression and Splicing Variation in a DM1 Mouse Model	82
Spatial Proteomics Reveals Distinct Protein Patterns in Cortical Migration Disorders Caused by LIN28A Overexpression and WNT Activation	79
Nuclear Factor I Family Members are Key Transcription Factors Regulating Gene Expression	74
Temporal Wheat Proteome Remodeling by Deoxynivalenol Reveals Novel Detoxification Signatures and Strategies Across Cultivars	71
LC-SRM Combined With Machine Learning Enables Fast Identification and Quantification of Bacterial Pathogens in Urinary Tract Infections	64
Sequencing of Polyclonal Antibodies by Integrating Intact Mass, Middle-Down and De Novo Bottom-Up Mass Spectrometry	62
Discovery Proteomics Analysis Determines That Driver Oncogenes Suppress Antiviral Defense Pathways Through Reduction in Interferon-β Autocrine Stimulation	62
mTORC2 Regulates Non-homologous End Joining Through Modulating the Temporal Dynamics of 53BP1	59
A Methanolic Urea-Enhanced Protein Extraction Enabling the Largest Bacterial Phosphorylation Resource	57
Region- and Cell-type–Resolved Multiomic Atlas of the Heart	55
Differential Proteome and Interactome Analysis Reveal the Basis of Pleiotropy Associated With the Histidine Methyltransferase Hpm1p	54
Proteomic portrait of degranulation program in human circulating neutrophils upon multi-inflammatory and infectious activation	54
In-Cell Chemical Crosslinking Identifies Hotspots for SQSTM-1/p62-IκBα Interaction That Underscore a Critical Role of p62 in Limiting NF-κB Activation Through IκBα Stabilization	51
PROTEOMIC CHANGES TO THE ANTERIOR CEREBRAL ARTERY IN ALZHEIMER’S DISEASE	50
Table of Contents	49
Easier, More Robust, and Faster Low-flow Quantitative Proteomics Approach	46
CREB-Regulated Transcriptional Coactivator 2 Proteome Landscape is Modulated by SREBF1	45
A Multipathway Phosphopeptide Standard for Rapid Phosphoproteomics Assay Development	41
Prenylated PALM2 Promotes the Migration of Esophageal Squamous Cell Carcinoma Cells Through Activating Ezrin	40
Immunopeptidomic Analyses of Colorectal Cancers With and Without Microsatellite Instability	39

Clinical Proteomics for Solid Organ Tissues	39
Structural Premise of Selective Deubiquitinase USP30 Inhibition by Small-Molecule Benzosulfonamides	39
Metabolic Enzyme Alterations and Astrocyte Dysfunction in a Murine Model of Alexander Disease With Severe Reactive Gliosis	38
Proteomic Characterization of Acute Myeloid Leukemia for Precision Medicine	37
Proteome Profiling of Cerebrospinal Fluid and Machine Learning Reveal Protein Classifiers of Two Forms of Alzheimer’s Disease Characterized by Increased or Not Altered Levels of Tau	35
Dynamic Proteomic Changes in Tumor and Immune Organs Reveal Systemic Immune Response to Tumor Development	34
HEXB Drives Raised Paucimannosylation in Colorectal Cancer and Stratifies Patient Risk	34
Filter-Aided Extracellular Vesicle Enrichment (FAEVEr) for Proteomics	33
Phosphoproteome Analysis Identifies a Synaptotagmin-1-Associated Complex Involved in Ischemic Neuron Injury	33
Bridging the Gap From Proteomics Technology to Clinical Application: Highlights From the 68th Benzon Foundation Symposium	33
Proximity Labeling and SILAC-Based Proteomic Approach Identifies Proteins at the Interface of Homotypic and Heterotypic Cancer Cell Interactions	33