OOIR: Observatory of International Research

Papers

(The H4-Index of Journal of Biomedical Informatics is 37. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-10-01 to 2025-10-01.)

Article	Citations
Cover 1/Spine	203
Leveraging heterogeneous tabular of EHRs with prompt learning for clinical prediction	184
Hypothesis-driven modeling of the human lung–ventilator system: A characterization tool for Acute Respiratory Distress Syndrome research	105
Integrating Mendelian randomization and literature-mined evidence for breast cancer risk factors	96
Development of a 3-Step theory of suicide ontology to facilitate 3ST factor extraction from clinical progress notes	92
Predicting relations between SOAP note sections: The value of incorporating a clinical information model	85
Joint modeling of mixed outcomes using a rank-based sparse neural network	80
Corrigendum to “A pipeline for harmonising NHS Scotland laboratory data to enable national-level analyses” [J. Biomed. Inform. 2025 Feb;162:104771. https://doi.org/10.1016/j.jbi.2024.104771. Epub 2025	72
Measuring disease burden with individual cumulative incidence in patients with cirrhosis	69
Graph-based abstractive biomedical text summarization	65
Realistic 3D infant head surfaces augmentation to improve AI-based diagnosis of cranial deformities	63
One-shot distributed algorithms for addressing heterogeneity in competing risks data across clinical sites	62
MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread	62
From centralized to ad-hoc knowledge base construction for hypotheses generation	62
Digital Phenotyping of Mental Health using multimodal sensing of multiple situations of interest: A Systematic Literature Review	59
Deep neural networks for neuro-oncology: Towards patient individualized design of chemo-radiation therapy for Glioblastoma patients	53
Detection of valvular heart diseases combining orthogonal non-negative matrix factorization and convolutional neural networks in PCG signals	52
A self-supervised language model selection strategy for biomedical question answering	50
Introducing the BlendedICU dataset, the first harmonized, international intensive care dataset	49
A robust phenotype-driven likelihood ratio analysis approach assisting interpretable clinical diagnosis of rare diseases	49
ViPal: A framework for virulence prediction of influenza viruses with prior viral knowledge using genomic sequences	49
Identifying cancer sub-types from genomic scale data sets using confidence based integration (CBI)	49
A multimodal machine learning algorithm improved diagnostic accuracy for otitis media in a school aged Aboriginal population	48
A Syntax-enhanced model based on category keywords for biomedical relation extraction	47
Learning the progression patterns of treatments using a probabilistic generative model	47

Creating a computer assisted ICD coding system: Performance metric choice and use of the ICD hierarchy	47
Multi-agent norm perception and induction in distributed healthcare	46
Discontinuous named entities in clinical text: A systematic literature review	46
From translational bioinformatics computational methodologies to personalized medicine	44
Towards a unified search: Improving PubMed retrieval with full text	44
Informative missingness: What can we learn from patterns in missing laboratory data in the electronic health record?	43
fmi-ii: Table of Contents	42
Cover 1/Spine	42
A fuzzy-based framework for diagnosing esophageal mobility disorder using high-resolution manometry	42
Extracting medication changes in clinical narratives using pre-trained language models	40
Using a clinical narrative-aware pre-trained language model for predicting emergency department patient disposition and unscheduled return visits	38
A cost-effective IoT learning environment for the training and assessment of surgical technical skills with visual learning analytics	37
Automatic categorization of self-acknowledged limitations in randomized controlled trial publications	37