Computing in Science & Engineering

Papers
(The TQCC of Computing in Science & Engineering is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)
ArticleCitations
mpi4py: Status Update After 12 Years of Development133
Jupyter: Thinking and Storytelling With Code and Data93
Using Jupyter for Reproducible Scientific Workflows56
The Kokkos EcoSystem: Comprehensive Performance Portability for High Performance Computing40
An Intuitive Tutorial to Gaussian Process Regression39
Cloud-Native Repositories for Big Scientific Data38
Accelerating Scientific Applications With SambaNova Reconfigurable Dataflow Architecture36
Data Visualization for the Understanding of COVID-1934
Nvidia Hopper GPU and Grace CPU Highlights27
Biomolecular Simulations in the Time of COVID-19, and After25
Supercomputing Pipelines Search for Therapeutics Against COVID-1921
Revealing the Mechanism of SARS-CoV-2 Spike Protein Binding With ACE220
Interactive Data Visualization in Jupyter Notebooks19
Toward Long-Term and Archivable Reproducibility19
Navigating Performance, Portability, and Productivity16
Accelerating HPC With Quantum Computing: It Is a Software Challenge Too14
FPGAs in the Cloud13
Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting12
Reproducibility Practice in High-Performance Computing: Community Survey Results12
The State of Fortran12
Reproducing GW150914: The First Observation of Gravitational Waves From a Binary Black Hole Merger11
Hands-On Computer Science: The Array of Things Experimental Urban Instrument11
The U.S. High-Performance Computing Consortium in the Fight Against COVID-1910
Visual Analytics for Decision-Making During Pandemics10
Scalable Analysis of Authentic Viral Envelopes on FRONTERA10
PyOMP: Multithreaded Parallel Programming in Python9
A Comparison of Quantum and Traditional Fourier Transform Computations9
Interactive Supercomputing With Jupyter9
Emerging Trends in Machine Learning for Computational Fluid Dynamics8
Advancing the Workforce That Supports Computationally and Data Intensive Research8
Exemplifying Computational Thinking Scenarios in the Age of COVID-19: Examining the Pandemic's Effects in a Project-Based MOOC8
The COVID-19 High-Performance Computing Consortium7
Performance Portability in the Exascale Computing Project: Exploration Through a Panel Series7
Portable Acceleration of Materials Modeling Software: CASTEP, GPUs, and OpenACC7
Performant, Portable, and Productive Parallel Programming With Standard Languages7
Materials and Molecular Modeling at the Exascale7
Discovering Metamorphic Relations for Scientific Software From User Forums7
Performance Measurements Within Asynchronous Task-Based Runtime Systems: A Double White Dwarf Merger as an Application6
Point Containment Queries on Ray-Tracing Cores for AMR Flow Visualization6
Automated Binocular Vision Measurement of Food Dimensions and Volume for Dietary Evaluation6
Realizing the Vision of CFD in 20306
Reproducibility of the First Image of a Black Hole in the Galaxy M87 From the Event Horizon Telescope Collaboration5
Translational Computer Science for Science and Engineering5
Simphony: An Open-Source Photonic Integrated Circuit Simulation Framework5
Jupyter-Enabled Astrophysical Analysis Using Data-Proximate Computing Platforms5
Jupyter in Computational Science5
Studying Physics, Getting to Know Python: RC Circuit, Simple Experiments, Coding, and Data Analysis With Raspberry Pi5
Reproducibility and Performance: Why Choose?5
Research Software Science: Expanding the Impact of Research Software Engineering4
The Nascent Case for Adopting Jupyter Notebooks as a Pedagogical Tool for Interdisciplinary Humanities, Social Science, and Arts Education4
Large-Scale Scientific Computing in the Fight Against COVID-194
Structured Adaptive Mesh Refinement Adaptations to Retain Performance Portability With Increasing Heterogeneity4
Supercomputing in Python With Legate4
Visual Analytics Review: An Early and Continuing Success of Convergent Research With Impact4
Discrete-Time Modeling of COVID-19 Propagation in Argentina with Explicit Delays4
Feature Analysis, Tracking, and Data Reduction: An Application to Multiphase Reactor Simulation MFiX-Exa for In-Situ Use Case4
In Situ Visualization With Temporal Caching4
Trustworthy Computational Evidence Through Transparency and Reproducibility4
Six Opportunities for Scientists and Engineers to Learn Programming Using AI Tools Such as ChatGPT4
Computational Decision Support for the COVID-19 Healthcare Coalition4
PyCOMPSs as an Instrument for Translational Computer Science4
Towards Improving the Efficiency of Organic Solar Cells by Coarse-Grained Atomistic Modeling of Processing Dependent Morphologies3
The Field of Computing Needs to Take Care of Its Mental Health3
The COVID-19 Pandemic is Widening the Gap for Women in STEM3
Designing a High-Performance Boundary Element Library With OpenCL and Numba3
The Origin and Development of Krylov Subspace Methods3
The Python/Jupyter Ecosystem: Today’s Problem-Solving Environment for Computational Science3
For the Public Good: Connecting, Retaining, and Recognizing Current and Future RSEs at U.S. National Research Laboratories and Agencies3
A Data Space for Climate Science in the European Open Science Cloud3
Scientific Computing With Python on High-Performance Heterogeneous Systems3
OpenACC Acceleration of an Agent-Based Biological Simulation Framework3
Diversity and Inclusion Through Leadership During Challenging Times3
Earth Virtualization Engines: A Technical Perspective2
Research Software Engineers: Career Entry Points and Training Gaps2
Mobile Processor Energy Usage in the Scientific Environment2
Bringing the Future Into Focus: Benefits and Challenges of High-Resolution Global Climate Change Simulations2
Optimal Kernel Design for Finite-Element Numerical Integration on GPUs2
Destination Earth: High-Performance Computing for Weather and Climate2
Lattice Gas Cellular Automata Fluid Dynamics Case Study2
Overcoming Challenges to Continuous Integration in HPC2
A PyMOL Snippet Library for Jupyter to Boost Researcher Productivity2
Research Software Engineering at Oak Ridge National Laboratory2
Quantum Computing and High-Performance Computing: Compilation Stack Similarities2
It’s Time to Talk About HPC Storage: Perspectives on the Past and Future2
Toward Democratizing Access to Facilities Data: A Framework for Intelligent Data Discovery and Delivery2
Notice of Retraction: Smart City Priority Correlation Using Differential Equation2
Infection Modeling Case Study: Discrete Spatial Susceptible-Infected-Recovered Model2
Co-design for Particle Applications at Exascale2
Hardware-Accelerated Ray Tracing of CAD-Based Geometry for Monte Carlo Radiation Transport2
Insights From the Software Design of a Multiphysics Multicomponent Scientific Code2
MolSSI Education: Empowering the Next Generation of Computational Molecular Scientists2
Study on Oil-Gas Separation Characteristics of Gearbox Sealing System of High-Speed Electric Multiple Unit2
High-Performance Interactive Scientific Visualization With Datoviz via the Vulkan Low-Level GPU API2
Formal Modeling and Simulation for SARS-CoV-2 Containment Scenarios in Catalonia2
Stencil Solvers for PDEs on GPUs: An Example From Cosmology2
MADP: An Open and Scalable Medical Auxiliary Diagnosis Platform2
Scalable Scientific Interactive Research Computing With Project Scinco2
Code Generation for Productive, Portable, and Scalable Finite Element Simulation in Firedrake2
Simple Physics With Python: A Workbook on Introductory Physics With Open-Source Software2
Toward Ultrahigh-Resolution E3SM Land Modeling on Exascale Computers2
Responsibly Reckless Matrix Algorithms for HPC Scientific Applications1
EPCC’s Exascale Journey: A Retrospective of the Past 10 Years and a Vision of the Future1
Computing Edge1
Python at Petascale With PyFR or: How I Learned to Stop Worrying and Love the Snake1
Jetstream2: Research Clouds as a Convergence Accelerator1
Giving Research Software Engineers a Larger Stage Through the Better Scientific Software Fellowship1
In Situ Visualization of Regional-Scale Natural Hazards With Galaxy and Material Point Method1
Scalable Many-Core Algorithms for Tridiagonal Solvers1
Leverage Biology to Learn Rapidly From Mistakes Without Feeling Like a Failure1
ANARI: A 3-D Rendering API Standard1
A Cast of Thousands: How the IDEAS Productivity Project Has Advanced Software Productivity and Sustainability1
High-Productivity Parallelism With Python Plus Packages (But Without a Cluster)1
Reflecting on the Scalable Adaptive Graphics Environment Team’s 20-Year Translational Research Endeavor in Digital Collaboration Tools1
XaaS: Acceleration as a Service to Enable Productive High-Performance Cloud Computing1
Good Practices for High-Quality Scientific Computing1
Relationships Between the Zeros, Weights, and Weight Functions of Orthogonal Polynomials: Derivative Rule Conjecture (the DRC) Applied to Stieltjes and Spectral Imaging1
IEEE COMPUTER SOCIETY: Call for Papers1
Exascale Was Not Inevitable; Neither Is What Comes Next1
Front Cover1
FluoRender Script: A Case Study of Lingua Franca in Translational Computer Science1
On Preserving Scientific Integrity for Climate Model Data in the HPC Era1
Special Issue on the Future of Research Software Engineers in the United States—Part II1
The Computational Science of Klaus Hasselmann1
Providing a Flexible and Comprehensive Software Stack Via Spack, an Extreme-Scale Scientific Software Stack, and Software Development Kits1
Special Issue on the Future of Research Software Engineers in the United States—Part I1
Front Cover1
Shader-Like Computations in WebGL for Advanced Graphics and General Purposes1
Computing Edge1
Then and Now: Improving Software Portability, Productivity, and 100× Performance1
Jack, The Autotuner1
Using Science Education Gateways to Improve Undergraduate STEM Education: The QUBES Platform as a Case Study1
Diversity, Equity, and Inclusion for Computer and Information Science and Engineering Conferences: How Change Happens and Four Things You Can Do Now1
Computational Science in the Battle Against COVID-19—Part II1
Massively Parallel Particle Hydrodynamics at Exascale1
Deploying Optimized Scientific and Engineering Applications on Exascale Systems1
A Finite-Element-Based Cohesive Zone Model of Water-Filled Surface Crevasse Propagation in Floating Ice Tongues1
Modeling the World’s Most Violent Thunderstorms1
Simulation for All: The Atomic, Molecular, and Optical Science Gateway1
Probabilistic Block Term Decomposition for the Modelling of Higher-order Arrays1
Creating Continuous Integration Infrastructure for Software Development on U.S. Department of Energy High-Performance Computing Systems1
[Front cover]1
Agent-Based Modeling of Traffic Systems Using Modelica1
Managing Software Provenance to Enhance Reproducibility in Computational Research1
Accidental Translationists: A Perspective From the Trenches1
Scalable Delivery of Scalable Libraries and Tools: How ECP Delivered a Software Ecosystem for Exascale and Beyond1
A Confidence-Guided Technique for Tracking Time-Varying Features1
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