OOIR: Observatory of International Research

Papers

(The median citation count of Expert Review of Proteomics is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)

Article	Citations
The path to anti-vector vaccines: current advances and limitations in proteomics and bioinformatics	80
How can proteomics help solve the lack of biomarkers to aid in the early diagnosis of motor neuron disease (MND)?	55
Proteomic insights into the extracellular matrix: a focus on proteoforms and their implications in health and disease	38
Proteomic profiling and network biology of colorectal cancer liver metastasis	22
24th Human Proteome Organization World Congress; Results from the Early Career Researcher Manuscript Competition announcement	19
Cutaneous leishmaniasis: multiomics approaches to unravel the role of immune cells checkpoints	18
Oncoproteomic profiling of AML: moving beyond genomics	18
The interdependence of machine learning and LC-MS approaches for an unbiased understanding of the cellular immunopeptidome	17
Mapping the human brain proteome: opportunities, challenges, and clinical potential	16
Omics and rare diseases: challenges, applications, and future perspectives	16
The method developer’s guide to oligonucleotide design	14
Positional proteomics: is the technology ready to study clinical cohorts?	13
LC-MS/MS: A sensitive and selective analytical technique to detect COVID-19 protein biomarkers in the early disease stage	11
Proteomic tools to study phosphorylation of intrinsically disordered proteins	10
Advancing kidney transplant outcomes: the role of urinary proteomics in graft function monitoring and rejection detection	10
A computational method for the prediction and functional analysis of potential Mycobacterium tuberculosis adhesin-related proteins	10
Utilizing databases for astrocyte secretome research	10
Optimization of glycopeptide enrichment techniques for the identification of clinical biomarkers	9
Proteomic profiling of cerebrospinal fluid reveals pathophysiology changes and diversity of treatment response in pediatric Streptococcus pneumoniae meningitis	8
Paving the path toward multi-omics approaches in the diagnostic challenges faced in thyroid pathology	8
Proteogenomic profiling of acute myeloid leukemia to identify therapeutic targets	8
Role of structural disorder in the multi-functionality of flavivirus proteins	7
Unravelling disease complexity: integrative analysis of multi-omic data in clinical research	7
Recent advances in mass spectrometry for the detection of doping	7
How to maximize power for differential expression analysis in discovery omics through experimental design	6

Analyzing the glial proteome in Alzheimer’s disease	6
A Galaxy of informatics resources for MS-based proteomics	6
Integrated metabolomics and proteomics analysis of plasma lipid metabolism in Parkinson’s disease	6
Proteomic interrogation of the human olfactory system: the road ahead	6
Mass spectrometry (MS)-based proteomics and the sulfome: clinical potential	6
Rebellion of the deregulated regulators: What is the clinical relevance of studying intrinsically disordered proteins?	6
T cell population size control by coronin 1 uncovered: from a spot identified by two-dimensional gel electrophoresis to quantitative proteomics	6
Extracellular vesicle proteomics in brain solid tumors: future strategy for personalized medicine	5
Salivary metabolomics in early detection of oral squamous cell carcinoma – a meta-analysis	5
Characterization of anticancer drug resistance by reverse-phase protein array: new targets and strategies	5
Advances in the clinical use of metaproteomics	5
Revisiting the antigen markers of vector-borne parasitic diseases identified by immunomics: identification and application to disease control	5
Tackling reproducibility: lessons for the proteomics community	5
The use of urine peptidomics to define dietary gluten peptides from patients with celiac disease and the clinical relevance	5
The evolution of analytical techniques for multiplex analysis of protein biomarkers	5
How glycomic studies can impact on prostate cancer	5
Glycosylation in cancer as a source of biomarkers	5
Proteomic profiling of oral squamous cell carcinoma tissues reveals altered immune-related proteins: implications for personalized therapy	4
The role of E3 ubiquitin ligase in multiple myeloma: potential for cereblon E3 ligase modulators in the treatment of relapsed/refractory disease	4
Integrative analysis of proteomic and MRI data reveals protein associations with brain imaging features in Alzheimer’s disease	4
Neuroproteomic mapping of kinases and their substrates downstream of acetylcholine: finding and implications	4
Patient-responsive protein biomarkers for cartilage degeneration and repair identified in the infrapatellar fat pad	4
Evaluation of a ‘plug and play’ nanoflow liquid chromatography system for MS-based proteomic characterization of clinical FFPE specimens	4
Urine proteomics in cardiovascular disease: advances in biomarker discovery and clinical applications	4
Recent implementations of data-independent acquisition for cancer biomarker discovery in biological fluids	4
VDAC1: at the crossroads of cancer signalling and metabolism	4
Interaction and regulation of the mitochondrial proteome – in health and disease	4
Metabolomics in diabetes mellitus: clinical insight	4
Proteomics in the study of female fertility: an update	4
MRMAssayDB: a comprehensive integrated resource for targeted proteomics assays	3
Rise of the SARS-CoV-2 Variants: can proteomics be the silver bullet?	3
Genetic signatures of suicide attempt behavior: insights and applications	3
Mapping the human sperm proteome – novel insights into reproductive research	3
Single-cell omics techniques to elucidate cell-to-cell variability in signalling cascades involved in human diseases	3
Metabolomics in cardiovascular diseases: from prevention strategies to domain-specific applications	3
Blood plasma proteomic markers of Alzheimer’s disease, current status and application prospects	3
A proteome-level view of brain tumors for a better understanding of novel diagnosis, prognosis, and therapy	3
How can proteomics be incorporated into the management of atrial fibrillation?	3
Metabolomics studies in cushing’s syndrome: recent developments and perspectives	3
Proteolytic signaling in cancer	3
Glycoproteomic contributions to hepatocellular carcinoma research: a 2023 update	3
Deciphering a proteomic signature for the early detection of breast cancer from breast milk: the role of quantitative proteomics	3
Toward real clinical utility: leveraging comprehensive cancer proteomic datasets for clinical insight	3
AlphaFold and what is next: bridging functional, systems and structural biology	3
How valuable can proteogenomics be in clinical breast cancer research?	3
Immobilized metal ion affinity chromatography: waltz of metal ions and biomacromolecules	3
Oncoproteins E6/E7 of the human papillomavirus types 16 & 18 synergize in modulating oncogenes and tumor suppressor proteins in colorectal cancer	3
Recent progress in quantitative phosphoproteomics	3
Proteomics applications in next generation induced pluripotent stem cell models	3
Proteomic scrutiny of nasal microbiomes: implications for the clinic	2

An interview with William Cho	2
Two decades of advances in sequence-based prediction of MoRFs, disorder-to-order transitioning binding regions	2
Cellular thermal shift assay: an approach to identify and assess protein target engagement	2
Spatial Proteomics towards cellular Resolution	2
Proteomics and phosphoproteomics analysis of tissues for the reoccurrence prediction of colorectal cancer	2
Empowering women and addressing underrepresentation in the field of mass spectrometry	2
Protein biomarkers for radiation injury and testing of medical countermeasure efficacy: promises, pitfalls, and future directions	2
HDL proteome: from its characterization to quantitative measurements in particle subspecies and functional associations	2
Identifying therapeutic strategies for triple-negative breast cancer via phosphoproteomics	2
Emerging protein sequencing technologies: proteomics without mass spectrometry?	2
Proteomic technologies for profiling cell-membrane/secretome interactions in brain metastatic cancer progression	2
Understanding the age-related alterations in the testis-specific proteome	2
Schistosome proteomics: updates and clinical implications	2
Proteomic approaches for untangling pharmacological targets in acute myelogenous leukemia	2