OOIR: Observatory of International Research

Papers

(The H4-Index of BMC Microbiology is 39. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-06-01 to 2026-06-01.)

Article	Citations
MPSeqM, a tool combining multiplex PCR and high-throughput sequencing to study the polymorphism of eight Leptosphaeria maculans avirulence genes and its application to field surveys in France	173
Phylotaxonomic analysis uncovers underestimated species diversity within the genus Rossellomorea with description of selenium-resistant Rossellomorea yichunensis sp. nov	115
Myochromella unveiled: exploring its global distribution through a public database of amplicons	103
Multi-omics analysis of host-microbiome interactions in a mouse model of congenital hepatic fibrosis	100
Description of Sediminicola litoralis sp. nov. isolated from tidal flat sediment and functional genomic analysis of the genus Sediminicola	93
Aspergillus flavus YRB2 from Thymelaea hirsuta (L.) Endl., a non-aflatoxigenic endophyte with ability to overexpress defense-related genes against Fusarium root rot of maize	72
Environmental stressors drive fungal community homogenization and diversity loss in plateau freshwater lakes	71
Genetic determinants of Biofilm formation of Helicobacter pylori using whole-genome sequencing	71
YZ462 exhibits potent antibacterial activity against methicillin-resistant Staphylococcus aureus through bacterial membrane disruption	69
A novel enzymatic approach for a targeted fungal growth inhibition	69
Characterization of broad-host-range bacteriophages targeting multidrug-resistant E. coli and Shigella spp.: in vitro potential	67
Morphology and molecular phylogeny of two freshwater ciliates, with notes on a new species and redescription of a known species (Ciliophora, Oligohymenophorea)	65
Environmental impact on the genome shaping of putative new Streptomyces species	62
Correction: Novel multiplex real-time PCR assays reveal a high prevalence of diarrhoeagenic Escherichia coli pathotypes in healthy and diarrhoeal children in the south of Vietnam	62
Synergistic potential of Leu10-teixobactin and cefepime against multidrug-resistant Staphylococcus aureus	60
The prevalence of colistin resistance in clinical Stenotrophomonas maltophilia isolates worldwide: a systematic review and meta-analysis	54
Transcriptomic meta-analysis to identify potential antifungal targets in Candida albicans	53
Purification and characterization of novel class IId bacteriocins, petauricin A and petauricin B produced by Lactococcus petauri NC2	52
Nosocomial transmission, adaption and clinical outcomes of carbapenem-resistant hypervirulent Klebsiella pneumoniae	49
Metagenomic sequencing and binning reveal carbon cycling microorganisms and gene functions in park environments	49
The zoonotic pathogen Wohlfahrtiimonas chitiniclastica – current findings from a clinical and genomic perspective	48
The transcription factor YbdO attenuates the pathogenicity of avian pathogenic Escherichia coli by regulating oxidative stress response	45
NagPIBAF upregulation and ompO downregulation compromise oxidative stress tolerance of Stenotrophomonas maltophilia	45
Occurrence and antimicrobial susceptibility of Salmonella enterica in milk along the supply chain, humans, and the environment in Woliata Sodo, Ethiopia	43
Mechanisms of altitude-driven mycotoxin variation in stored wheat: a metabolomic and transcriptomic approach	43

Adolescent gut microbiome imbalance and its association with immune response in inflammatory bowel diseases and obesity	43
Epidemiology and carbapenemase gene distribution among carbapenem-resistant enterobacterales: a two-year retrospective study in a Saudi tertiary hospital	43
Dung beetle-associated yeasts display multiple stress tolerance: a desirable trait of potential industrial strains	42
A novel Sinomonas strain and Its genus-wide genomic insights into plant growth-promoting potential	42
Coexistence of plasmid-mediated quinolone resistance (PMQR) and extended-spectrum beta-lactamase (ESBL) genes among clinical Pseudomonas aeruginosa isolates in Egypt	42
Antineoplastic with DNA fragmentation assay and anti-oxidant, anti-inflammatory with gene expression activity of Lactobacillus plantarum isolated from local Egyptian milk products	42
Reproductive tract microbiota dysbiosis in ovarian endometrioma and adenomyosis: multi-site 16S rRNA profiling and functional impact of key bacterial species on human endometrial stromal cells	42
Hotspots sequences of gyrA, gyrB, parC, and parE genes encoded for fluoroquinolones resistance from local Salmonella Typhi strains in Jakarta	41
High colonization by multidrug-resistant and virulent Staphylococcus aureus genotypes among critically ill patients in the COVID-19 pandemic in a Brazilian hospital	41
Gut microbiota dysbiosis promotes coronary heart disease comorbid with depression through lipopolysaccharides and Toll-like receptor 4	41
Identification of hypervirulent Klebsiella pneumoniae based on biomarkers and Galleria mellonella infection model	41
Early prediction of invasive fungal infection risk in acute-on-chronic liver failure: a prediction model based on admission indicators	40
Combatting biofilm formation of Klebsiella pneumoniae and Bacillus subtilis clinical strains from the oral cavity using biogenic Se-NPs: molecular docking simulation and cytotoxic effects on HepG2 can	40
Decoding Proteus mirabilis biofilms: expression of selected virulence genes and association with antibiotic resistance	40
Discrete patterns of microbiome variability across timescales in a wild rodent population	39
Bacterial agents of otitis media and their antibiotic resistance profile: a retrospective clinical presentation at St. Dominic Hospital, Akwatia, Ghana	39
Unveiling the microbial shift: the impact of group B Streptococcus on vaginal microbiota and inflammation in late pregnancy	39
Genomic portraits of methicillin-resistant staphylococci (MRS) from food fish unveiled the genes associated with staphylococcal food poisoning (SFP), virulence and antimicrobial resistance	39
A novel ready-to-use loop-mediated isothermal amplification (LAMP) method for detection of Burkholderia mallei and B. pseudomallei	39
Exploring nagZ as a virulence biomarker and treatment target in Enterobacter cloacae	39
Composition of pathogenic microorganism in chronic osteomyelitis based on metagenomic sequencing and its application value in etiological diagnosis	39