BMC Genomics

Article	Citations
SPLHRNMTF: robust orthogonal non-negative matrix tri-factorization with self-paced learning and dual hypergraph regularization for predicting miRNA-disease associations	142
Genome-wide QTL and eQTL mapping reveal genes associated with growth rate trait of the Pacific white shrimp (Litopenaeus vannamei)	111
Genome-wide identification, expression analysis of the R2R3-MYB gene family and their potential roles under cold stress in Prunus sibirica	101
Salinity-responsive histone PTMs identified in the gills and gonads of Mozambique tilapia (Oreochromis mossambicus)	96
A catalog of gene editing sites and genetic variations in editing sites in model organisms	93
Revised time estimation of the ancestral human chromosome 2 fusion	86
Genomic prediction with non-additive effects in beef cattle: stability of variance component and genetic effect estimates against population size	76
Insertion of an endogenous Jaagsiekte sheep retrovirus element into the BCO2 - gene abolishes its function and leads to yellow discoloration of adipose tissue in Norwegian Spælsau (Ovis aries)	73
Understanding host response to infectious salmon anaemia virus in an Atlantic salmon cell line using single-cell RNA sequencing	64
Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach	56
Effects of hibernation on two important contractile tissues in tibetan frogs, Nanorana parkeri: a perspective from transcriptomics and metabolomics approaches	55
Detecting antibody reactivities in Phage ImmunoPrecipitation Sequencing data	54
Genetic and genomic analysis of reproduction traits in holstein cattle using SNP chip data and imputed sequence level genotypes	54
Characterization of fine geographic scale population genetics in sugar kelp (Saccharina latissima) using genome-wide markers	53
The expression of RBPJ and its potential role in rheumatoid arthritis	52
De novo assembly and annotation of the singing mouse genome	50
Validation of reference genes for whole blood gene expression analysis in cord blood of preterm and full-term neonates and peripheral blood of healthy adults	49
HiFiBGC: an ensemble approach for improved biosynthetic gene cluster detection in PacBio HiFi-read metagenomes	47
From CFTR to a CF signalling network: a systems biology approach to study Cystic Fibrosis	46
Genome-wide identification and expression analysis of the NRT genes in Ginkgo biloba under nitrate treatment reveal the potential roles during calluses browning	46
Population genetic study of 17 Y-STR Loci of the Sorani Kurds in the Province of Sulaymaniyah, Iraq	45
Introgression of pigs in Taihu Lake region possibly contributed to the improvement of fertility in Danish Large White pigs	45
Alteration of chromosome structure impacts gene expressions implicated in pancreatic ductal adenocarcinoma cells	45
A putative scenario of how de novo protein-coding genes originate in the Saccharomyces cerevisiae lineage	44
Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response	44

Genome-wide identification and stress response analysis of cyclophilin gene family in apple (Malus × domestica)	42
peaksat: an R package for ChIP-seq peak saturation analysis	41
Biological factors in the synthetic construction of overlapping genes	41
Analysis of differentially expressed Sclerotinia sclerotiorum genes during the interaction with moderately resistant and highly susceptible chickpea lines	40
A targeted antibody-based array reveals a serum protein signature as biomarker for adolescent idiopathic scoliosis patients	40
Genomic insights into the antimicrobial resistance and virulence of Helicobacter pylori isolates from gastritis patients in Pereira, Colombia	40
Analysis of asymptomatic Drosophila models for ALS and SMA reveals convergent impact on functional protein complexes linked to neuro-muscular degeneration	39
Genome-wide identification and expression profile under abiotic stress of the barley non-specific lipid transfer protein gene family and its Qingke Orthologues	38
Dynamic physiological and transcriptomic changes reveal memory effects of salt stress in maize	38
ProEnd: a comprehensive database for identifying HbYX motif-containing proteins across the tree of life	38
Small open reading frames: a comparative genetics approach to validation	38
Correction: Alterations in exosomal miRNA profile upon epithelial-mesenchymal transition in human lung cancer cell lines	37
Proteomic networks and related genetic variants associated with smoking and chronic obstructive pulmonary disease	37
Genome-wide association study identifies key quantitative trait loci (QTL) for fruit morphometric traits in avocado (Persea spp.)	37
The effect of induced molting on the testicular physiological remodeling in no-semen roosters	37
Genome-wide identification of polyamine metabolism and ethylene synthesis genes in Chenopodium quinoa Willd. and their responses to low-temperature stress	36
Assembly and comparative analysis of the complete mitochondrial genome of Brassica rapa var. Purpuraria	36
Large-scale integration of meta-QTL and genome-wide association study identifies genomic regions and candidate genes for photosynthetic efficiency traits in bread wheat	36
Genome-wide and comparative phylogenetic analysis of senescence-associated NAC transcription factors in sunflower (Helianthus annuus)	36
Correction to: Spatiotemporal expression profle of novel and known small RNAs throughout rice plant development focussing on seed tissues	36
Quantitative trait loci and candidate genes for yield-related traits of upland cotton revealed by genome-wide association analysis under drought conditions	35
Autophagy is involved in the toxicity of the biocontrol agent GC16 against Tetranychus pueraricola (Acari: Tetranychidae) based on transcriptomic and proteomic analyses	35
Genome-wide association study provided insights into the polled phenotype and polled intersex syndrome (PIS) in goats	35
Genomic consequences of intensive inbreeding in miniature inbred pigs	35
Metabolomics, phytohormone and transcriptomics strategies to reveal the mechanism of barley heading date regulation to responds different photoperiod	35
Caregiver-child interaction and early childhood development among preschool children in rural China: the possible role of blood epigenome-wide DNA methylation	34
UTR-Insight: integrating deep learning for efficient 5′ UTR discovery and design	34
Identification of ABC transporter G subfamily in white lupin and functional characterization of L.albABGC29 in phosphorus use	34
The multi-omics signatures of telomere length in childhood	34
Inhibition of CUB and sushi multiple domains 1 (CSMD1) expression by miRNA-190a-3p enhances hypertrophic scar-derived fibroblast migration in vitro	34
Genetic effect of an InDel in the promoter region of the NUDT15 and its effect on myoblast proliferation in chickens	34
Detection of potential functional variants based on systems-biology: the case of feed efficiency in beef cattle	34
Genome-wide scan for selection signatures reveals novel insights into the adaptive capacity characteristics in three Chinese cattle breeds	34
A novel isatin Schiff based cerium complex: synthesis, characterization, antimicrobial activity and molecular docking studies	34
Integrated analysis of the transcriptome and hormone metabolome elucidates the regulatory mechanisms governing walnut bud germination	34
Evolutionary genetics of flipper forelimb and hindlimb loss from limb development-related genes in cetaceans	33
Correction: Comparative transcriptome analysis of skin color-associated genes in leopard coral grouper (Plectropomus leopardus)	33
Comparative genomic analysis of the tricarboxylic acid cycle members in four Solanaceae vegetable crops and expression pattern analysis in Solanum tuberosum	33
Gut microbiota profiling variated during colorectal cancer development in mouse	33
Comprehensive analysis of RNA m6A methylation in pressure overload-induced cardiac hypertrophy	33
XCVATR: detection and characterization of variant impact on the Embeddings of single -cell and bulk RNA-sequencing samples	33
Dexamethasone-induced whitening of rabbit brown adipose tissue: leptin resistance and mitochondrial dysfunction	33
Genomic analysis of SBP gene family in Saccharum spontaneum reveals their association with vegetative and reproductive development	33
Expression of ABC transporters negatively correlates with ectoine biosynthesis in Halomonas campaniensis under NaCl and ultraviolet mutagenesis treatments revealed by transcriptomic and proteomics com	33
Beta-galactosidase gene family genome-wide identification and expression analysis of members related to fruit softening in melon (Cucumis melo L.)	32
Phylogeographic relationships and the evolutionary history of the Carassius auratus complex with a newly born homodiploid raw fish (2nNCRC)	32
Comprehensive genome-wide analysis of calmodulin-binding transcription activator (CAMTA) in Durio zibethinus and identification of fruit ripening-associated DzCAMTAs	32
Cold exposure induces lipid dynamics and thermogenesis in brown adipose tissue of goats	32
An in-depth bioinformatic analysis of the novel recombinant lumpy skin disease virus strains: from unique patterns to established lineage	32
Diversity and evolution analysis of RNA viruses in three wheat aphid species	32

Characterization of rumen microbiome and immune genes expression of crossbred beef steers with divergent residual feed intake phenotypes	32
Transcriptomic and genomic analysis provides new insights in molecular and genetic processes involved in zucchini ZYMV tolerance	32
Shared and distinct interactions of type 1 and type 2 Epstein-Barr Nuclear Antigen 2 with the human genome	31
Relationship and distribution of Salmonella enterica serovar I 4,[5],12:i:- strain sequences in the NCBI Pathogen Detection database	31
Genome-wide analysis of the P450 gene family in tea plant (Camellia sinensis) reveals functional diversity in abiotic stress	31
Genome-wide identification and expression analysis of the xyloglucan endotransglucosylase/hydrolase gene family in poplar	31
Clonostachys rosea ‘omics profiling: identification of putative metabolite-gene associations mediating its in vitro antagonism against Fusarium graminearum	31
Transcriptional response of murine microglia in Alzheimer’s disease and inflammation	31
Genetic architecture of end-use quality traits in soft white winter wheat	30
Genome-wide identification and expression analysis of the SPL transcription factor family and its response to abiotic stress in Pisum sativum L	30
plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style	30
Ascites-derived hsa-miR-181a-5p serves as a prognostic marker for gastric cancer-associated malignant ascites	30
Genome-wide identification of AP2/ERF gene family in Coptis Chinensis Franch reveals its role in tissue-specific accumulation of benzylisoquinoline alkaloids	30
Transcriptome analysis reveals fluid shear stress (FSS) and atherosclerosis pathway as a candidate molecular mechanism of short-term low salinity stress tolerance in abalone	29
Molecular characterization of recombinant LSDV isolates from 2022 outbreak in Indonesia through phylogenetic networks and whole-genome SNP-based analysis	29
Genome-wide analysis of polyamine biosynthesis genes in wheat reveals gene expression specificity and involvement of STRE and MYB-elements in regulating polyamines under drought	29
Genome-wide landscape of runs of homozygosity and differentiation across Egyptian goat breeds	29
Taxonomy, comparative genomics of Mullein (Verbascum, Scrophulariaceae), with implications for the evolution of Verbascum and Lamiales	29
Construction of the first high-density SNP genetic map and identification of QTLs for the natural rubber content in Taraxacum kok-saghyz Rodin	29
Integrative multi-omics approach for identifying molecular signatures and pathways and deriving and validating molecular scores for COVID-19 severity and status	29
Identifying genomic islands with deep neural networks	29
Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in foxtail millet (Setaria italica L.)	29
The effects of runs-of-homozygosity on pig domestication and breeding	29
Examining parent-of-origin effects on transcription and RNA methylation in mediating aggressive behavior in honey bees (Apis mellifera)	29
Characterization of Danube Swabian population samples on a high-resolution genome-wide basis	28
Genome-wide association analysis reveals a novel QTL CsPC1 for pericarp color in cucumber	28
RNA-Seq analysis of the pyloric caecum, liver, and muscle reveals molecular mechanisms regulating fillet color in rainbow trout	28
Analysis of miRNAs in milk of four livestock species	28
SARS-CoV-2 surveillance in Italy through phylogenomic inferences based on Hamming distances derived from pan-SNPs, -MNPs and -InDels	28
Identification and expression analysis of the glycosyltransferase GT43 family members in bamboo reveal their potential function in xylan biosynthesis during rapid growth	28
Comparison of structural variants detected by PacBio-CLR and ONT sequencing in pear	28
Chloroplast genomes of five Oedogonium species: genome structure, phylogenetic analysis and adaptive evolution	28
Differential miRNA expression profiles in the bone marrow of Beagle dogs at different stages of Toxocara canis infection	27
Genomic analysis of severe COVID-19 considering or not asthma comorbidity: GWAS insights from the BQC19 cohort	27
Survival of the fittest: genomic investigations of the bay scallop reveal a shift in population structure through a summer mortality event	27
Microscale total genomic DNA was used to explore the complete mitochondrial genomes of two biting midge species of the family Ceratopogonidae (Insecta: Diptera)	27
A population genomics approach to unlock the genetic potential of lablab (Lablab purpureus (L.) Sweet), an underutilized tropical forage crop	27
Identification of knowledge gaps in whole-genome sequence analysis of multi-resistant thermotolerant Campylobacter spp.	27
Genome-wide association study considering genotype-by-environment interaction for productive and reproductive traits using whole-genome sequencing in Nellore cattle	27
Whole exome sequence reveals genetic profiles of primary cardiomyopathy and genotype-phenotype association in Chinese population	27
Integrative analysis of the steroidal alkaloids distribution and biosynthesis of bulbs Fritillariae Cirrhosae through metabolome and transcriptome analyses	26
Genome-wide association screening and verification of potential genes associated with root architectural traits in maize (Zea mays L.) at multiple seedling stages	26
SWATH-MS based proteomics reveals the role of photosynthesis related proteins and secondary metabolic pathways in the colored leaves of sweet olive (Osmanthus fragrans)	26
Genome sequencing reveals novel causative structural and single nucleotide variants in Pakistani families with congenital hypogonadotropic hypogonadism	26
Genome-wide identification of the NLR gene family in Haynaldia villosa by SMRT-RenSeq	26
Single-nucleus RNA sequencing and lipidomics reveal characteristics of transcriptional and lipid composition in porcine longissimus dorsi muscle	26
Genome-wide identification of R2R3-MYB gene family and association with anthocyanin biosynthesis in Brassica species	26
The landscape of the long non-coding RNAs in developing mouse retinas	26
Complete chloroplast genomes of 13 species of sect. Tuberculata Chang (Camellia L.): genomic features, comparative analysis, and phylogenetic relationships	26
Cruxome: a powerful tool for annotating, interpreting and reporting genetic variants	26
Gene co-expression network analysis in zebrafish reveals chemical class specific modules	26
Transcriptome analysis of five ovarian stages reveals gonad maturation in female Macrobrachium nipponense	26
IL-33 priming and antigenic stimulation synergistically promote the transcription of proinflammatory cytokine and chemokine genes in human skin mast cells	25
The CCCH zinc finger family of soybean (Glycine max L.): genome-wide identification, expression, domestication, GWAS and haplotype analysis	25
A complete mitochondrial genome for fragrant Chinese rosewood (Dalbergia odorifera, Fabaceae) with comparative analyses of genome structure and intergenomic sequence transfers	25
Genome-wide analysis of the AP2/ERF gene family in Tritipyrum and the response of TtERF_B2-50 in salt-tolerance	25
Near telomere-to-telomere genome assemblies of two Chlorella species unveil the composition and evolution of centromeres in green algae	25
Genome-wide detection of RNA editing events during the hair follicles cycle of Tianzhu white yak	25
Comparative genotypic characterization related to antibiotic resistance phenotypes of clinical carbapenem-resistant Acinetobacter baumannii MTC1106 (ST2) and MTC0619 (ST25)	25
Canine hyper-sociability structural variants associated with altered three-dimensional chromatin state	25
Benchmarking full-length transcript single cell mRNA sequencing protocols	25
Identification of key genes for triacylglycerol biosynthesis and storage in herbaceous peony (Paeonia lactifolra Pall.) seeds based on full-length transcriptome	24
Accuracy benchmark of the GeneMind GenoLab M sequencing platform for WGS and WES analysis	24
scQCEA: a framework for annotation and quality control report of single-cell RNA-sequencing data	24
Genome-wide identification and evolution of the tubulin gene family in Camelina sativa	24
Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA	24
A transcriptome-wide analysis provides novel insights into how Metabacillus indicus promotes coral larvae metamorphosis and settlement	24
Gene silencing, knockout and over-expression of a transcription factor ABORTED MICROSPORES (SlAMS) strongly affects pollen viability in tomato (Solanum lycopersicum)	24
Small RNA sequencing and bioinformatics analysis of RAW264.7-derived exosomes after Mycobacterium Bovis Bacillus Calmette-Guérin infection	24
TB-DROP: deep learning-based drug resistance prediction of Mycobacterium tuberculosis utilizing whole genome mutations	24
Thirteen complete chloroplast genomes of the costaceae family: insights into genome structure, selective pressure and phylogenetic relationships	24
Alternative splicing induces sample-level variation in gene–gene correlations	24
Sex-specific differential gene expression during stolonization in the branching syllid Ramisyllis kingghidorahi (Annelida, Syllidae)	24
Identification and response analysis of xyloglucan endotransglycosylase/hydrolases (XTH) family to fluoride and aluminum treatment in Camellia sinensis	24
Identification of lncRNA, miRNA and mRNA expression profiles and ceRNA Networks in small cell lung cancer	24
Inferring and analyzing gene regulatory networks from multi-factorial expression data: a complete and interactive suite	24
Physiological and molecular mechanisms of leaf response to high-temperature stress in high-temperature-resistant soybean varieties	24
Genome-wide identification of heterotrimeric G protein genes in castor (Ricinus communis L.) and expression patterns under salt stress	23
The evolutionary dynamics of genome sizes and repetitive elements in Ensifera (Insecta: Orthoptera)	23
Transcriptome and WGCNA reveals the potential genetic basis of photoperiod-sensitive male sterility in soybean	23

The fiber diameter traits of Tibetan cashmere goats are governed by the inherent differences in stress, hypoxic, and metabolic adaptations: an integrative study of proteome and transcriptome	23
Bioinformatics analysis of the Microsporidia sp. MB genome: a malaria transmission-blocking symbiont of the Anopheles arabiensis mosquito	23
Genomic formation of Tibeto-Burman speaking populations in Guizhou, Southwest China	23
Immune transcriptomic profile in adult female pigs: dominance status has more influence than environmental enrichment	23
Single-cell profiling reveals transcriptome dynamics during bovine oocyte growth	23
Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle	23
Intron size minimisation in teleosts	23
Genome-wide expression of the residual lung reacting to experimental Pneumonectomy	23
Correction: Genetic diversity and signatures of selection for heat tolerance and immune response in Iranian native chickens	23
Alternative splicing perspective to prey preference of environmentally friendly biological agent Cryptolaemus montrouzieri	23
microRNA regulation of skin pigmentation in golden-back mutant of crucian carp from a rice-fish integrated farming system	23
Genome-wide identification of MBD gene family members in Eleutherococcus senticosus with their expression motifs under drought stress and DNA demethylation	23
Haplotype-resolved genome of Mimosa bimucronata revealed insights into leaf movement and nitrogen fixation	23
Genomes of the Orestias pupfish from the Andean Altiplano shed light on their evolutionary history and phylogenetic relationships within Cyprinodontiformes	23
Correction to: Genome-wide development of insertiondeletion (InDel) markers for Cannabis and its uses in genetic structure analysis of Chinese germplasm and sex-linked marker identification	23
Multi-omics data integration reveals novel drug targets in hepatocellular carcinoma	22
Long-read sequencing of extrachromosomal circular DNA and genome assembly of a Solanum lycopersicum breeding line revealed active LTR retrotransposons originating from S. Peruvianum L. introgressions	22
Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformis	22
Chromosomal localization of cohesin is differentially regulated by WIZ, WAPL, and G9a	22
The different subtelomeric structure among 1RS arms in wheat-rye 1BL.1RS translocations affecting their meiotic recombination and inducing their structural variation	22
Findzx: an automated pipeline for detecting and visualising sex chromosomes using whole-genome sequencing data	22
Chlamydia suis undergoes interclade recombination promoting Tet-island exchange	22
Integrated analysis of single-cell and bulk RNA sequencing data reveals prognostic characteristics of lysosome-dependent cell death-related genes in osteosarcoma	22
Multi-locus genome-wide association mapping for spike-related traits in bread wheat (Triticum aestivum L.)	22
Longitudinal multi-omic changes in the transcriptome and proteome of peripheral blood cells after a 4 Gy total body radiation dose to Rhesus macaques	22
Comparative analysis of the whole transcriptome landscapes of muscle and adipose tissue in Qinchuan beef cattle	21
Genetic mapping and candidate gene identification of BoGL5, a gene essential for cuticular wax biosynthesis in broccoli	21
Integrated microRNA and whole-transcriptome sequencing reveals the involvement of small and long non-coding RNAs in the fiber growth of ramie plant	21
Transcription factor-binding k-mer analysis clarifies the cell type dependency of binding specificities and cis-regulatory SNPs in humans	21
Seminal fluid proteins induce transcriptome changes in the Aedes aegypti female lower reproductive tract	21
HTS and scRNA-seq revealed that the location and RSS quality of the mammalian TRBV and TRBJ genes impact biased rearrangement	21
Genome-wide identification and molecular expression profile analysis of FHY3/FAR1 gene family in walnut (Juglans sigillata L.) development	21
Chemical composition determination and transcriptomic analyses provide insight into the differences between wild and grafted Semen Ziziphi Spinosae	21
A comparative analysis of the intrauterine transcriptome in fertile and subfertile mares using cytobrush sampling	21
Comparative transcriptomic analysis of the different developmental stages of ovary in the cuttlefish Sepia pharaonis	21
Characterization of a strain-specific CD-1 reference genome reveals potential inter- and intra-strain functional variability	21
Cyclin-dependent kinases (CDKs) are key genes regulating early development of Neptunea arthritica cumingii: evidence from comparative transcriptome and proteome analyses	21
Transcriptome analysis reveals Vernalization is independent of cold acclimation in Arabidopsis	21
Alternative splicing level related to intron size and organism complexity	21
Potential mutagenicity of aflatoxin B1 in Egyptian spices	21
QTL mapping for starch paste viscosity of rice (Oryza sativa L.) using chromosome segment substitution lines derived from two sequenced cultivars with the same Wx allele	21
Transcriptome analysis of the endangered dung beetle Copris tripartitus (Coleoptera: Scarabaeidae) and characterization of genes associated to immunity, growth, and reproduction	21
High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata	21
Effects of glutamate and aspartate on prostate cancer and breast cancer: a Mendelian randomization study	21
Assessment of DNA methylation in porcine immune cells reveals novel regulatory elements associated with cell-specific gene expression and immune capacity traits	21
Identification of ARF family in blueberry and its potential involvement of fruit development and pH stress response	21
Correction to: Genome wide effects of oleic acid on cultured bovine granulosa cells: evidence for the activation of pathways favoring folliculo-luteal transition	20
Correction to: Deploying new generation sequencing for the study of flesh color depletion in Atlantic Salmon (Salmo salar)	20
Comparative genomics analysis and virulence-related factors in novel Aliarcobacter faecis and Aliarcobacter lanthieri species identified as potential opportunistic pathogens	20
Split Pool Ligation-based Single-cell Transcriptome sequencing (SPLiT-seq) data processing pipeline comparison	20
Defining super-enhancers by highly ranked histone H4 multi-acetylation levels identifies transcription factors associated with glioblastoma stem-like properties	20
Evaluation of methods to detect circular RNAs from single-end RNA-sequencing data	20
Transcriptomic profiling reveals histone acetylation-regulated genes involved in somatic embryogenesis in Arabidopsis thaliana	20
In the battle of the disease: a transcriptomic analysis of European foulbrood-diseased larvae of the Western honey bee (Apis mellifera)	20
Correction: Genome-wide association study for stayability at diferent calvings in Nellore beef cattle	20
Establishment and validation of the autophagy-related ceRNA network in irreversible pulpitis	20
The compact genome of Caenorhabditis niphades n. sp., isolated from a wood-boring weevil, Niphades variegatus	20
Molecular genetic diversity and population structure analyses of rutabaga accessions from Nordic countries as revealed by single nucleotide polymorphism markers	20
Whole-transcriptome sequencing reveals a vernalization-related ceRNA regulatory network in chinese cabbage (Brassica campestris L. ssp. pekinensis)	20
Genomic mining of Vibrio parahaemolyticus highlights prevalence of antimicrobial resistance genes and new genetic markers associated with AHPND and tdh + /trh + genotypes	20
Detection and evaluation of parameters influencing the identification of heterozygous-enriched regions in Holstein cattle based on SNP chip or whole-genome sequence data	20
Multi-tissue metabolomic profiling reveals the crucial metabolites and pathways associated with scallop growth	20
ZF-HD gene family in rapeseed (Brassica napus L.): genome-wide identification, phylogeny, evolutionary expansion and expression analyses	20
Correction: Comparative genome-wide identification and characterization of SET domain-containing and JmjC domain-containing proteins in piroplasms	20
scFSNN: a feature selection method based on neural network for single-cell RNA-seq data	20
Genome sequencing and comparative genomics reveal insights into pathogenicity and evolution of Fusarium zanthoxyli, the causal agent of stem canker in prickly ash	20
Genome-wide association study identifies genomic regions associated with key reproductive traits in Korean Hanwoo cows	20
Genome-wide identification, expression analysis, and functional study of the bZIP transcription factor family and its response to hormone treatments in pea (Pisum sativum L.)	20
Star allele search: a pharmacogenetic annotation database and user-friendly search tool of publicly available 1000 Genomes Project biospecimens	20
Transcriptome and metabolome analysis to reveal major genes of saikosaponin biosynthesis in Bupleurum chinense	20
Combinatorial metabolomic and transcriptomic analysis of muscle growth in hybrid striped bass (female white bass Morone chrysops x male striped bass M. saxatilis)	19
Identification and expression analysis of histone modification gene (HM) family during somatic embryogenesis of oil palm	19
Integrative analysis of transcriptome and metabolism reveals potential roles of carbon fixation and photorespiratory metabolism in response to drought in Shanlan upland rice	19
Evaluation of CRISPR gene-editing tools in zebrafish	19
Comparative chloroplast genomics reveals the phylogeny and the adaptive evolution of Begonia in China	19
Network visualization of genes involved in skeletal muscle myogenesis in livestock animals	19
The identification, adaptive evolutionary analyses and mRNA expression levels of homeobox (hox) genes in the Chinese mitten crab Eriocheir sinensis	19
Multi-trait GWAS for diverse ancestries: mapping the knowledge gap	19
Chromosome-scale assembly and annotation of the perennial ryegrass genome	19
Development of SNP and InDel markers by genome resequencing and transcriptome sequencing in radish (Raphanus sativus L.)	19
Investigation of SNP markers for the melatonin production trait in the Hu sheep with bulked segregant analysis	19
DNA-QLC: an efficient and reliable image encoding scheme for DNA storage	19
Global transcriptome analysis reveals resistance genes in the early response of common bean (Phaseolus vulgaris L.) to Colletotrichum lindemuthianum	19
GM-lncLoc: LncRNAs subcellular localization prediction based on graph neural network with meta-learning	19
First core microsatellite panel identification in Apennine brown bears (Ursus arctos marsicanus): a collaborative approach	19
An algorithm for annotation and classification of T. cruzi MASP sequences: towards a better understanding of the parasite genetic variability	19
Genomic prediction using machine learning: a comparison of the performance of regularized regression, ensemble, instance-based and deep learning methods on synthetic and empirical data	19
Full-length 16S rRNA gene sequencing by PacBio improves taxonomic resolution in human microbiome samples	19
Genomic trajectories of a near-extinction event in the Chatham Island black robin	19
Genomic and transcriptomic survey of bryozoan Hox and ParaHox genes with emphasis on phylactolaemate bryozoans	19
Integration of transcriptomics and network analysis reveals co-expressed genes in Frankliniella occidentalis larval guts that respond to tomato spotted wilt virus infection	19
Abundant small RNAs in the reproductive tissues and eggs of the honey bee, Apis mellifera	19
Identification and characterization of the T cell receptor (TCR) repertoire of the cynomolgus macaque (Macaca Fascicularis)	19
Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeq	19
Genome-wide association study identifying genetic variants associated with carcass backfat thickness, lean percentage and fat percentage in a four-way crossbred pig population using SLAF-seq technolog	19