BMC Genomics

Papers
(The TQCC of BMC Genomics is 7. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-03-01 to 2025-03-01.)
ArticleCitations
Insights into bs5 resistance mechanisms in pepper against Xanthomonas euvesicatoria through transcriptome profiling203
Transcriptome and methylome changes in two contrasting mungbean genotypes in response to drought stress128
Genome wide transcriptome analysis provides bases on hepatic lipid metabolism disorder affected by increased dietary grain ratio in fattening lambs106
Functions of thyroid hormone signaling in regulating melanophore, iridophore, erythrophore, and pigment pattern formation in spotted scat (Scatophagus argus)101
Application of copy number variation sequencing combined with whole exome sequencing in prenatal left–right asymmetry disorders87
The multi-omics signatures of telomere length in childhood86
Genome-wide investigation of microRNAs and expression profiles during rhizome development in ginger (Zingiber officinale Roscoe)79
Generalizability of machine learning in predicting antimicrobial resistance in E. coli: a multi-country case study in Africa77
Transcriptome analysis reveals the high temperature induced damage is a significant factor affecting the osmotic function of gill tissue in Siberian sturgeon (Acipenser baerii)67
Genome-wide identification and gene expression networks of LBD transcription factors in Populus trichocarpa61
Characterization of sexual maturity-associated N6-methyladenosine in boar testes56
Transcriptomic responses of Mediterranean sponges upon encounter with symbiont microbial consortia55
Shared and distinct interactions of type 1 and type 2 Epstein-Barr Nuclear Antigen 2 with the human genome54
Evolutionary analysis and functional characterization of BZR1 gene family in celery revealed their conserved roles in brassinosteroid signaling52
Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture51
Comparative genomics and phylogenetic relationships of two endemic and endangered species (Handeliodendron bodinieri and Eurycorymbus cavaleriei) of two monotypic genera within Sapindales48
Small RNA sequencing reveals various microRNAs involved in piperine biosynthesis in black pepper (Piper nigrum L.)47
Comparative analysis of the chloroplast and mitochondrial genomes of Saposhnikovia divaricata revealed the possible transfer of plastome repeat regions into the mitogenome46
Inhibition of CUB and sushi multiple domains 1 (CSMD1) expression by miRNA-190a-3p enhances hypertrophic scar-derived fibroblast migration in vitro46
Comprehensive analysis of key genes and pathways for biological and clinical implications in thyroid-associated ophthalmopathy45
Genetic variation and demographic history of Sudan desert sheep reveal two diversified lineages45
Computational dissection of genetic variation modulating the response of multiple photosynthetic phenotypes to the light environment44
Identification of QTL for kernel weight and size and analysis of the pentatricopeptide repeat (PPR) gene family in cultivated peanut (Arachis hypogaea L.)43
A comprehensive allele specific expression resource for the equine transcriptome42
Comparison of Illumina and Oxford Nanopore sequencing data quality for Clostridioides difficile genome analysis and their application for epidemiological surveillance41
Insights into the nuclear-organelle DNA integration in Cicuta virosa (Apiaceae) provided by complete plastid and mitochondrial genomes41
UTR-Insight: integrating deep learning for efficient 5′ UTR discovery and design40
Preliminary exploration of mRNA, lncRNA, and miRNA expressions in the bovine jejunum unveils novel aspects of Mycobacterium avium subspecies paratuberculosis infections40
sORFdb – a database for sORFs, small proteins, and small protein families in bacteria37
Integrated analysis of the transcriptome and hormone metabolome elucidates the regulatory mechanisms governing walnut bud germination37
Systematic ocular phenotyping of 8,707 knockout mouse lines identifies genes associated with abnormal corneal phenotypes36
Characterization and functional analysis of conserved non-coding sequences among poaceae: insights into gene regulation and phenotypic variation in maize36
Sherlock-Genome: an R Shiny application for genomic analysis and visualization36
Genic constraint against nonsynonymous variation across the mouse genome35
Differential splicing of neuronal genes in a Trem2*R47H mouse model mimics alterations associated with Alzheimer’s disease35
Autophagy is involved in the toxicity of the biocontrol agent GC16 against Tetranychus pueraricola (Acari: Tetranychidae) based on transcriptomic and proteomic analyses35
Phenotypic variation and genome-wide association studies of main culm panicle node number, maximum node production rate, and degree-days to heading in rice35
Chloroplast genomes of five Oedogonium species: genome structure, phylogenetic analysis and adaptive evolution34
Dynamic physiological and transcriptomic changes reveal memory effects of salt stress in maize33
Host-specific co-evolution likely driven by diet in Buchnera aphidicola33
Genes expressed at low levels raise false discovery rates in RNA samples contaminated with genomic DNA33
Analysis of autosomal dominant genes impacted by copy number loss in 24,844 fetuses without structural abnormalities33
Genome-wide characterization and expression profiling of B3 superfamily during ethylene-induced flowering in pineapple (Ananas comosus L.)33
UnCoVar: a reproducible and scalable workflow for transparent and robust virus variant calling and lineage assignment using SARS-CoV-2 as an example33
During evolution from the earliest tetrapoda, newly-recruited genes are increasingly paralogues of existing genes and distribute non-randomly among the chromosomes32
Ascites-derived hsa-miR-181a-5p serves as a prognostic marker for gastric cancer-associated malignant ascites32
Polygenic risk score model for renal cell carcinoma in the Korean population and relationship with lifestyle-associated factors32
Genome-wide analysis of the P450 gene family in tea plant (Camellia sinensis) reveals functional diversity in abiotic stress32
Comparative genomic analysis of the Growth-Regulating Factors-Interacting Factors (GIFs) in six Salicaceae species and functional analysis of PeGIF3 reveals their regulatory role in Populus heteromorp32
Diet-induced changes in the jejunal microbiota of developing broilers reduce the abundance of Enterococcus hirae and Enterococcus faecium32
Effective population size in field pea32
Complete genome sequence and identification of polyunsaturated fatty acid biosynthesis genes of the myxobacterium Minicystis rosea DSM 24000T31
The effect of lipocalin-2 (LCN2) on apoptosis: a proteomics analysis study in an LCN2 deficient mouse model31
A comparative plastome approach enhances the assessment of genetic variation in the Melilotus genus31
Zinc supplementation modifies brain tissue transcriptome of Apis mellifera honeybees31
Gene expression profiling of trout muscle during flesh quality recovery following spawning31
Long-read PacBio genome sequencing of four environmental saprophytic Sporothrix species spanning the pathogenic clade31
Gene expression profiling unveils the temporal dynamics of CIGB-300-regulated transcriptome in AML cell lines31
Analysis of complete chloroplast genome sequences and insight into the phylogenetic relationships of Ferula L.31
Machine learning approaches to predict the Plant-associated phenotype of Xanthomonas strains31
The genome of sheep ked (Melophagus ovinus) reveals potential mechanisms underlying reproduction and narrower ecological niches31
Genome-wide identification, evolution, and role of SPL gene family in beet (Beta vulgaris L.) under cold stress31
Transcriptional responses are oriented towards different components of the rearing environment in two Drosophila sibling species31
An in-depth bioinformatic analysis of the novel recombinant lumpy skin disease virus strains: from unique patterns to established lineage31
Signals of positive selection in genomes of palearctic Myotis-bats coexisting with a fungal pathogen31
Genomic analysis based on chromosome-level genome assembly reveals Myrtaceae evolution and terpene biosynthesis of rose myrtle30
Genome-wide association study provided insights into the polled phenotype and polled intersex syndrome (PIS) in goats30
Transcriptome analysis of the Japanese eel (Anguilla japonica) during larval metamorphosis30
Metagenomics of gut microbiome for migratory seagulls in Kunming city revealed the potential public risk to human health30
Marine gregarine genomes reveal the breadth of apicomplexan diversity with a partially conserved glideosome machinery30
The nuclear and mitochondrial genome assemblies of Tetragonisca angustula (Apidae: Meliponini), a tiny yet remarkable pollinator in the Neotropics30
Transcriptome of different fruiting stages in the cultivated mushroom Cyclocybe aegerita suggests a complex regulation of fruiting and reveals enzymes putatively involved in fungal oxylipin biosynthes30
Characterization of a novel root-associated diazotrophic rare PGPR taxa, Aquabacter pokkalii sp. nov., isolated from pokkali rice: new insights into the plant-associated lifestyle and brackish adaptat29
A comparative transcriptomic analysis reveals a coordinated mechanism activated in response to cold acclimation in common vetch (Vicia sativa L.)29
Severe pantothenic acid deficiency induces alterations in the intestinal mucosal proteome of starter Pekin ducks29
Systematic analysis and expression profiles of TCP gene family in Tartary buckwheat (Fagopyrum tataricum (L.) Gaertn.) revealed the potential function of FtTCP15 and FtTCP18 in response to abiotic str29
RNA-binding proteins potentially regulate the alternative splicing of apoptotic genes during knee osteoarthritis progression28
Identification of crucial circRNAs in skeletal muscle during chicken embryonic development28
Transcriptomic and genomic analysis provides new insights in molecular and genetic processes involved in zucchini ZYMV tolerance28
Identification of drought responsive Elaeis guineensis WRKY transcription factors with sensitivity to other abiotic stresses and hormone treatments28
Genome-wide characterization and expression analysis of α-amylase and β-amylase genes underlying drought tolerance in cassava28
Genome-wide analyses reveal a strong association between LEPR gene variants and body fat reserves in ewes28
Integrated transcriptome and endogenous hormone analyses reveal the factors affecting the yield of Camellia oleifera28
Ectopic and transient expression of VvDIR4 gene in Arabidopsis and grapes enhances resistance to anthracnose via affecting hormone signaling pathways and lignin production28
Investigating the causal impact of gut microbiota on glioblastoma: a bidirectional Mendelian randomization study28
Comparative genomic analysis of the tricarboxylic acid cycle members in four Solanaceae vegetable crops and expression pattern analysis in Solanum tuberosum27
Recurrent neural network for predicting absence of heterozygosity from low pass WGS with ultra-low depth27
Complete chloroplast genome and comparison of herbicides toxicity on Aeschynomene indica (Leguminosae) in upland direct-seeding paddy field27
How imputation can mitigate SNP ascertainment Bias27
Genome-wide identification, classification, and expression analysis of the JmjC domain-containing histone demethylase gene family in birch27
Assembly and comparative analysis of the complete mitochondrial genome of Brassica rapa var. Purpuraria27
Genome-wide screening of the RNase T2 gene family and functional analyses in jujube (Ziziphus jujuba Mill.)26
Suppression of pyrrolidine ring biosynthesis and its effects on gene expression and subsequent accumulation of anatabine in leaves of tobacco (N. tabacum L.)26
Transcriptome analysis of Populus × canadensis ‘Zhongliao1’ in response to low temperature stress26
Integrated transcriptomics contrasts fatty acid metabolism with hypoxia response in β-cell subpopulations associated with glycemic control26
Jasmonate signaling drives defense responses against Alternaria alternata in chrysanthemum26
scMEB: a fast and clustering-independent method for detecting differentially expressed genes in single-cell RNA-seq data26
RGS4 impacts carbohydrate and siderophore metabolism in Trichoderma reesei26
Hi-C analysis of genomic contacts revealed karyotype abnormalities in chicken HD3 cell line26
Modeling exercise using optogenetically contractible Drosophila larvae26
Comparative analysis of whole blood transcriptomics between European and local Caribbean pigs in response to feed restriction in a tropical climate26
A targeted antibody-based array reveals a serum protein signature as biomarker for adolescent idiopathic scoliosis patients25
MIR396-GRF/GIF enhances in planta shoot regeneration of Dendrobium catenatum25
Characterisation of the Paenarthrobacter nicotinovorans ATCC 49919 genome and identification of several strains harbouring a highly syntenic nic-genes cluster25
Genome sequences of BCG Pasteur ATCC 35734 and its derivative, the vaccine candidate BCGΔBCG1419c25
A genome-wide study of the lipoxygenase gene families in Medicago truncatula and Medicago sativa reveals that MtLOX24 participates in the methyl jasmonate response25
Characteristics of DNA macro-alterations in breast cancer with liver metastasis before treatment25
Genome-wide identification and expression analysis of the SPL transcription factor family and its response to abiotic stress in Pisum sativum L25
Physiological attributes and transcriptomics analyses reveal the mechanism response of Helictotrichon virescens to low temperature stress25
ProEnd: a comprehensive database for identifying HbYX motif-containing proteins across the tree of life24
Genome-wide identification of CAMTA genes and their expression dependence on light and calcium signaling during seedling growth and development in mung bean24
Sequencing and analysis of the complete mitochondrial genomes of Toona sinensis and Toona ciliata reveal evolutionary features of Toona24
Identification and validation of qRT-PCR reference genes for analyzing grape infection with gray mold24
Microsatellite density landscapes illustrate short tandem repeats aggregation in the complete reference human genome24
Analysis of Gyimes Csango population samples on a high-resolution genome-wide basis24
Deregulated RNAs involved in sympathetic regulation of sepsis-induced acute lung injury based on whole transcriptome sequencing24
Chromosome-level genome assemblies of two parasitoid biocontrol wasps reveal the parthenogenesis mechanism and an associated novel virus24
Characterizing virulence differences in a parasitoid wasp through comparative transcriptomic and proteomic24
Illuminating the biosynthesis pathway genes involved in bioactive specific monoterpene glycosides in Paeonia veitchii Lynch by a combination of sequencing platforms24
Transcriptomics analysis reveals the signal transduction mechanism of brassinolides in tea leaves and its regulation on the growth and development of Camellia sinensis23
Circular and L50-like leaderless enterocins share a common ABC-transporter immunity gene23
Comparative analysis of novel and common reference genes in adult tissues of the mussel Mytilus galloprovincialis23
Comparison of capture-based mtDNA sequencing performance between MGI and illumina sequencing platforms in various sample types23
Sea of opportunities: marine genomics in an era of global environmental change23
Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs23
Genetic correlation for alcohol consumption between Europeans and East Asians23
Whole blood transcriptome profiling identifies candidate genes associated with alopecia in male giant pandas (Ailuropoda melanoleuca)23
Structural and gene composition variation of the complete mitochondrial genome of Mammillaria huitzilopochtli (Cactaceae, Caryophyllales), revealed by de novo assembly23
Long non-coding RNA pairs to assist in diagnosing sepsis23
Analysis of asymptomatic Drosophila models for ALS and SMA reveals convergent impact on functional protein complexes linked to neuro-muscular degeneration23
Gene coexpression network during ontogeny in the yellow fever mosquito, Aedes aegypti23
Genome-wide characterization of regulator of chromosome condensation 1 (RCC1) gene family in Artemisia annua L. revealed a conservation evolutionary pattern23
Imprinted Dlk1-Gtl2 cluster miRNAs are potential epigenetic regulators of lamb fur quality23
Frequent tRNA gene translocation towards the boundaries with control regions contributes to the highly dynamic mitochondrial genome organization of the parasitic lice of mammals23
Genome-wide characterization of the MBF1 gene family and its expression pattern in different tissues and stresses in Zanthoxylum armatum23
Immune system modulation & virus transmission during parasitism identified by multi-species transcriptomics of a declining insect biocontrol system23
Predicting substrates for orphan solute carrier proteins using multi-omics datasets22
DNA methylome and transcriptome identified Key genes and pathways involved in Speckled Eggshell formation in aged laying hens22
Changes in ADAR RNA editing patterns in CMV and ZIKV congenital infections22
Leveraging genomic insights from the neglected malaria parasites P. malariae and P. ovale using selective whole genome amplification (SWGA) approach22
The interactions between monocarboxylate transporter genes MCT1, MCT2, and MCT4 and the kinetics of blood lactate production and removal after high-intensity efforts in elite males: a cross-sectional 22
Nanopore adaptive sampling to identify the NLR gene family in melon (Cucumis melo L.)22
Unravelling the transcriptomic symphony of muscle ageing: key pathways and hub genes altered by ageing and caloric restriction in rat muscle revealed by RNA sequencing22
GBDT_KgluSite: An improved computational prediction model for lysine glutarylation sites based on feature fusion and GBDT classifier22
The phylogenomic landscape of extended-spectrum β-lactamase producing Citrobacter species isolated from surface water22
Genomic data integration tutorial, a plant case study22
De novo genome hybrid assembly and annotation of the endangered and euryhaline fish Aphanius iberus (Valenciennes, 1846) with identification of genes potentially involved in salinity adaptation22
Elucidating the evolutionary dynamics of parasitism in Cuscuta: in-depth phylogenetic reconstruction and extensive plastomes reduction22
Comparative analysis of HKTs in six poplar species and functional characterization of PyHKTs in stress-affected tissues22
Comprehensive analysis of the long noncoding RNA-associated competitive endogenous RNA network in the osteogenic differentiation of periodontal ligament stem cells22
Combining GWAS and comparative genomics to fine map candidate genes for days to flowering in mung bean22
Morphological, physiological, and transcriptional responses to low nitrogen stress in Populus deltoides Marsh. clones with contrasting nitrogen use efficiency22
Effects of a transient lack of dietary mineral phosphorus on renal gene expression and plasma metabolites in two high-yielding laying hen strains22
Genomic consequences of intensive inbreeding in miniature inbred pigs22
Frequencies of CYP2C9 polymorphisms in a Syrian cohort22
Transcriptome-wide dynamics of m6A methylation in ISKNV and Siniperca chuatsi cells infected with ISKNV21
The lactococcal ICE-ome encodes a repertoire of exchangeable traits with potential industrial relevance21
Basic leucine zipper (bZIP) transcription factor genes and their responses to drought stress in ginseng, Panax ginseng C.A. Meyer21
Analysis of differentially expressed Sclerotinia sclerotiorum genes during the interaction with moderately resistant and highly susceptible chickpea lines21
Genome-wide association study identifies candidate genes affecting body conformation traits of Zhongwei goat21
Comparative pangenomic analysis of predominant human vaginal lactobacilli strains towards population-specific adaptation: understanding the role in sustaining a balanced and healthy vaginal microenvir21
Comprehensive genome-wide analysis of calmodulin-binding transcription activator (CAMTA) in Durio zibethinus and identification of fruit ripening-associated DzCAMTAs21
High-quality chromosome-scale de novo assembly of the Paspalum notatum ‘Flugge’ genome21
Expression profile and bioinformatics analysis of circRNA and its associated ceRNA networks in longissimus dorsi from Lufeng cattle and Leiqiong cattle21
Morphological, anatomical, and transcriptomics analysis reveals the regulatory mechanisms of cassava plant height development21
Identification of proteins associated with bast fiber growth of ramie by differential proteomic analysis21
Identification of ABC transporter G subfamily in white lupin and functional characterization of L.albABGC29 in phosphorus use21
Diet-derived transmission of MicroRNAs from host plant into honey bee Midgut20
The antennal transcriptome analysis and characterizations of odorant-binding proteins in Megachile saussurei (Hymenoptera, Megachilidae)20
High heteroplasmy is associated with low mitochondrial copy number and selection against non-synonymous mutations in the snail Cepaea nemoralis20
A comparison of the TempO-Seq and Affymetrix microarray platform using RTqPCR validation20
Molecular characterization of recombinant LSDV isolates from 2022 outbreak in Indonesia through phylogenetic networks and whole-genome SNP-based analysis20
Integrated proteomic and transcriptomic profiling identifies aberrant gene and protein expression in the sarcomere, mitochondrial complex I, and the extracellular matrix in Warmblood horses with myofi20
Characterization of a novel multi-resistant Pseudomonas juntendi strain from China with chromosomal blaVIM−2 and a megaplasmid coharboring blaIMP−1−like and blaOXA−120
Genome-wide investigation and expression profiling of polyphenol oxidase (PPO) family genes uncover likely functions in organ development and stress responses in Populus trichocarpa20
Genome-wide identification of polyamine metabolism and ethylene synthesis genes in Chenopodium quinoa Willd. and their responses to low-temperature stress20
Correction: Identification of crucial LncRNAs associated with testicular development and LOC108635509 as a potential regulator in black goat spermatogenesis20
Insights into phylogenetic relationships in Pinus inferred from a comparative analysis of complete chloroplast genomes20
Sequence characteristics, genetic diversity and phylogenetic analysis of the Cucurbita ficifolia (Cucurbitaceae) chloroplasts genome20
Evolutionary history of arbuscular mycorrhizal fungi and genomic signatures of obligate symbiosis20
Genome-wide investigation of the nuclear factor Y gene family in Ginger (Zingiber officinale Roscoe): evolution and expression profiling during development and abiotic stresses20
Structural divergence and phylogenetic relationships of Ajania (Asteraceae) from plastomes and ETS20
Unexpected genomic, biosynthetic and species diversity of Streptomyces bacteria from bats in Arizona and New Mexico, USA20
Genome-wide QTL and eQTL mapping reveal genes associated with growth rate trait of the Pacific white shrimp (Litopenaeus vannamei)20
Genome sequence of Ophryocystis elektroscirrha, an apicomplexan parasite of monarch butterflies: cryptic diversity and response to host-sequestered plant chemicals20
Gut microbiota profiling variated during colorectal cancer development in mouse20
Whole-genome SNP allele frequency differences between Tibetan and Large white pigs reveal genes associated with skeletal muscle growth20
RNA-Seq reveals miRNA role in thermogenic regulation in brown adipose tissues of goats20
Proteomic networks and related genetic variants associated with smoking and chronic obstructive pulmonary disease20
Genomic analysis of SBP gene family in Saccharum spontaneum reveals their association with vegetative and reproductive development20
Comparison of the Illumina NextSeq 2000 and GeneMind Genolab M sequencing platforms for spatial transcriptomics20
Association mapping reveals a reciprocal virulence/avirulence locus within diverse US Pyrenophora teres f. maculata isolates20
Long noncoding RNAs and mRNAs profiling in ovary during laying and broodiness in Taihe Black-Bone Silky Fowls (Gallus gallus Domesticus Brisson)19
A high-density linkage map and sex-determination loci in Pacific white shrimp (Litopenaeus vannamei)19
Genetic effect of an InDel in the promoter region of the NUDT15 and its effect on myoblast proliferation in chickens19
Construction of a ceRNA network in glioma and analysis of its clinical significance19
Drug repurposing based on the DTD-GNN graph neural network: revealing the relationships among drugs, targets and diseases19
Transcriptomic alterations in the ovine caruncular endometrium due to imbalanced nutrition and FSH-induced ovarian hyperstimulation19
Predicting lncRNA-protein interactions using a hybrid deep learning model with dinucleotide-codon fusion feature encoding19
Integrative analysis of the transcriptome, proteomics and metabolomics reveals key genes involved in the regulation of breast muscle metabolites in capons19
Genomics and transcriptomics of epizoic Seisonidea (Rotifera, syn. Syndermata) reveal strain formation and gradual gene loss with growing ties to the host19
Dynamic changes in the transcriptome and metabolome of pig ovaries across developmental stages and gestation19
Genome-wide identification and expression profile under abiotic stress of the barley non-specific lipid transfer protein gene family and its Qingke Orthologues19
Genome-wide run of homozygosity analysis reveals candidate genomic regions associated with environmental adaptations of Tibetan native chickens19
Genome-based taxonomic classification of the genus Sulfitobacter along with the proposal of a new genus Parasulfitobacter gen. nov. and exploring the gene clusters associated with sulfur oxidation19
Multi-omic analysis reveals the effects of interspecific hybridization on the synthesis of seed reserve polymers in a Triticum turgidum ssp. durum × Aegilops sharonensis amphidiploid19
The mitochondrial genome of Faughnia haani (Stomatopoda): novel organization of the control region and phylogenetic position of the superfamily Parasquilloidea19
Yield increment and transcriptome response caused by blue light treatment in Hericium coralloides19
Genomic characterization of a nematode tolerance locus in sugar beet19
Characterization of a haplotype-reference panel for genotyping by low-pass sequencing in Swiss Large White pigs19
dbCNV: deleteriousness-based model to predict pathogenicity of copy number variations19
Effect of metabolically divergent pig breeds and tissues on mesenchymal stem cell expression patterns during adipogenesis19
De novo and comparative transcriptomic analysis explain morphological differences in Panax notoginseng taproots19
AutoCNV: a semiautomatic CNV interpretation system based on the 2019 ACMG/ClinGen Technical Standards for CNVs19
Combined metabolomic and transcriptomic analysis reveals the key genes for triterpenoid biosynthesis in Cyclocarya paliurus19
LCRAnnotationsDB: a database of low complexity regions functional and structural annotations19
TAD cliques predict key features of chromatin organization18
Genome-wide identification of the GRF family in sweet orange (Citrus sinensis) and functional analysis of the CsGRF04 in response to multiple abiotic stresses18
Insights into the genetic variability and evolutionary dynamics of tomato spotted wilt orthotospovirus in China18
Development of pre-implantation genetic testing protocol for monogenic disorders (PGT-M) of Hb H disease18
spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data18
Integrative analyses and validation of ferroptosis-related genes and mechanisms associated with cerebrovascular and cardiovascular ischemic diseases18
Genome-wide analysis of spatiotemporal expression patterns during rice leaf development18
Genome-wide identification and expression analysis of the B-box transcription factor gene family in grapevine (Vitis vinifera L.)18
Genomic analysis of the marine yeast Rhodotorula sphaerocarpa ETNP2018 reveals adaptation to the open ocean18
Validation of reference genes for whole blood gene expression analysis in cord blood of preterm and full-term neonates and peripheral blood of healthy adults18
De novo assembly and annotation of the singing mouse genome18
Introgression of pigs in Taihu Lake region possibly contributed to the improvement of fertility in Danish Large White pigs18
A high-quality de novo genome assembly based on nanopore sequencing of a wild-caught coconut rhinoceros beetle (Oryctes rhinoceros)18
Identifying genomic islands with deep neural networks18
PhyloMissForest: a random forest framework to construct phylogenetic trees with missing data18
Whole-genome sequencing reveals genomic diversity and selection signatures in Xia’nan cattle18
Exploring the genetic basis of anthracnose resistance in Ethiopian sorghum through a genome-wide association study18
Insertion of an endogenous Jaagsiekte sheep retrovirus element into the BCO2 - gene abolishes its function and leads to yellow discoloration of adipose tissue in Norwegian Spælsau (Ovis aries)18
Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis18
Transcriptomics and gut microbiome analysis of the edible herb Bidens pilosa as a functional feed additive to promote growth and metabolism in tilapia (Oreochromis spp.)18
Imprints of independent allopolyploid formations on patterns of gene expression in two sibling yarrow species (Achillea, Asteraceae)18
Telomere-to-telomere assembly of the genome of an individual Oikopleura dioica from Okinawa using Nanopore-based sequencing18
Genome-wide identification and expression analysis of the NRT genes in Ginkgo biloba under nitrate treatment reveal the potential roles during calluses browning18
Transcriptome sequencing reveals the differentially expressed lncRNAs and mRNAs in response to cold acclimation and cold stress in Pomacea canaliculata18
Multi-level integrative analysis of the roles of lncRNAs and differential mRNAs in the progression of chronic pancreatitis to pancreatic ductal adenocarcinoma18
Prominent transcriptomic changes in Mycobacterium intracellulare under acidic and oxidative stress17
Genomic dissection of the correlation between milk yield and various health traits using functional and evolutionary information about imputed sequence variants of 34,497 German Holstein cows17
Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach17
Alteration of chromosome structure impacts gene expressions implicated in pancreatic ductal adenocarcinoma cells17
Gene regulatory network analysis defines transcriptome landscape with alternative splicing of human umbilical vein endothelial cells during replicative senescence17
Systematical characterization of Rab7 gene family in Gossypium and potential functions of GhRab7B3-A gene in drought tolerance17
Genetic diversities and drug resistance in Mycobacterium bovis isolates from zoonotic tuberculosis using whole genome sequencing17
Identification of defense related gene families and their response against powdery and downy mildew infections in Vitis vinifera17
Comprehensive evaluation and guidance of structural variation detection tools in chicken whole genome sequence data17
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