BMC Genomics

Article	Citations
Metabolomic analysis reveals the influence of HMBOX1 on RAW264.7 cells proliferation based on UPLC-MS/MS	191
Analysis of the transcriptome of bovine endometrial cells isolated by laser micro-dissection (2): impacts of post-partum negative energy balance on stromal, glandular and luminal epithelial cells	119
Expansion and diversity of caspases in Mytilus coruscus contribute to larval metamorphosis and environmental adaptation	99
Identification of two new QTLs of maize (Zea mays L.) underlying kernel row number using the HNAU-NAM1 population	86
HLA-E restricted cytomegalovirus UL40 peptide polymorphism may represent a risk factor following congenital infection	81
Plastome structure, phylogenomics, and divergence times of tribe Cinnamomeae (Lauraceae)	79
Integrated omics analysis reveals sirtuin signaling is central to hepatic response to a high fructose diet	75
Taxonomic distribution and evolutionary analysis of the equol biosynthesis gene cluster	66
Insights into bs5 resistance mechanisms in pepper against Xanthomonas euvesicatoria through transcriptome profiling	62
Transcriptome and methylome changes in two contrasting mungbean genotypes in response to drought stress	59
In silico secretome analyses of the polyphagous root-knot nematode Meloidogyne javanica: a resource for studying M. javanica secreted proteins	57
Genome wide transcriptome analysis provides bases on hepatic lipid metabolism disorder affected by increased dietary grain ratio in fattening lambs	56
The multi-omics signatures of telomere length in childhood	55
Application of copy number variation sequencing combined with whole exome sequencing in prenatal left–right asymmetry disorders	54
Functions of thyroid hormone signaling in regulating melanophore, iridophore, erythrophore, and pigment pattern formation in spotted scat (Scatophagus argus)	54
Accurate recombination estimation from pooled genotyping and sequencing: a case study on barley	52
Pan-genome of Citrullus genus highlights the extent of presence/absence variation during domestication and selection	52
A putative scenario of how de novo protein-coding genes originate in the Saccharomyces cerevisiae lineage	44
Transcriptomic insights into the epigenetic modulation of turnip mosaic virus evolution in Arabidopsis thaliana	44
Genome-wide investigation of microRNAs and expression profiles during rhizome development in ginger (Zingiber officinale Roscoe)	44
Integrative analysis of circRNA, miRNA, and mRNA profiles to reveal ceRNA regulation in chicken muscle development from the embryonic to post-hatching periods	44
Characterization of fine geographic scale population genetics in sugar kelp (Saccharina latissima) using genome-wide markers	43
The expression of RBPJ and its potential role in rheumatoid arthritis	43
RGeasy: a reference gene analysis tool for gene expression studies via RT-qPCR	41
Generalizability of machine learning in predicting antimicrobial resistance in E. coli: a multi-country case study in Africa	40

Utilisation of a mitochondrial intergenic region for species differentiation of fruit flies (Diptera: Tephritidae) in South Africa	39
piRNA-IPdb: a PIWI-bound piRNAs database to mining NGS sncRNA data and beyond	39
Transcriptome analysis reveals the high temperature induced damage is a significant factor affecting the osmotic function of gill tissue in Siberian sturgeon (Acipenser baerii)	39
Characterization of sexual maturity-associated N6-methyladenosine in boar testes	37
Genome-wide identification and gene expression networks of LBD transcription factors in Populus trichocarpa	37
Integrated mRNA and miRNA analysis reveals the regulatory network of oxidative stress and inflammation in Coilia nasus brains during air exposure and salinity mitigation	37
Transcriptome analysis revealed gene expression feminization of testis after exogenous tetrodotoxin administration in pufferfish Takifugu flavidus	36
Shared and distinct interactions of type 1 and type 2 Epstein-Barr Nuclear Antigen 2 with the human genome	35
Transcriptomic responses of Mediterranean sponges upon encounter with symbiont microbial consortia	35
Evolutionary analysis and functional characterization of BZR1 gene family in celery revealed their conserved roles in brassinosteroid signaling	34
Restoration of aberrant gene expression of monocytes in systemic lupus erythematosus via a combined transcriptome-reversal and network-based drug repurposing strategy	34
Upregulation of key genes Eln and Tgfb3 were associated with the severity of cardiac hypertrophy	34
Comparative analysis of the chloroplast and mitochondrial genomes of Saposhnikovia divaricata revealed the possible transfer of plastome repeat regions into the mitogenome	33
Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture	33
Small RNA sequencing reveals various microRNAs involved in piperine biosynthesis in black pepper (Piper nigrum L.)	33
Relationship and distribution of Salmonella enterica serovar I 4,[5],12:i:- strain sequences in the NCBI Pathogen Detection database	33
Inhibition of CUB and sushi multiple domains 1 (CSMD1) expression by miRNA-190a-3p enhances hypertrophic scar-derived fibroblast migration in vitro	33
Comparative genomics and phylogenetic relationships of two endemic and endangered species (Handeliodendron bodinieri and Eurycorymbus cavaleriei) of two monotypic genera within Sapindales	33
Genetic variation and demographic history of Sudan desert sheep reveal two diversified lineages	32
Comprehensive analysis of key genes and pathways for biological and clinical implications in thyroid-associated ophthalmopathy	32
Computational dissection of genetic variation modulating the response of multiple photosynthetic phenotypes to the light environment	32
PhyloMissForest: a random forest framework to construct phylogenetic trees with missing data	32
SpliceAPP: an interactive web server to predict splicing errors arising from human mutations	31
Taxonomy, comparative genomics of Mullein (Verbascum, Scrophulariaceae), with implications for the evolution of Verbascum and Lamiales	31
Change point detection for clustered expression data	31
Identification of QTL for kernel weight and size and analysis of the pentatricopeptide repeat (PPR) gene family in cultivated peanut (Arachis hypogaea L.)	31
Dynamic physiological and transcriptomic changes reveal memory effects of salt stress in maize	31
Transcriptome analysis reveals fluid shear stress (FSS) and atherosclerosis pathway as a candidate molecular mechanism of short-term low salinity stress tolerance in abalone	31
An overlooked phenomenon: complex interactions of potential error sources on the quality of bacterial de novo genome assemblies	31
Genome-wide identification and expression analyses of the pectate lyase (PL) gene family in Fragaria vesca	31
The genome of New Zealand trevally (Carangidae: Pseudocaranx georgianus) uncovers a XY sex determination locus	31
Maternal cold exposure induces distinct transcriptome changes in the placenta and fetal brown adipose tissue in mice	31
Genome-wide characterization and expression profiling of B3 superfamily during ethylene-induced flowering in pineapple (Ananas comosus L.)	30
Characterization of phytohormone and transcriptome profiles during protocorm-like bodies development of Paphiopedilum	30
Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response	30
Genes expressed at low levels raise false discovery rates in RNA samples contaminated with genomic DNA	30
Identifying genomic islands with deep neural networks	30
Long-term TE persistence even without beneficial insertion	29
Transcriptome sequencing reveals the differentially expressed lncRNAs and mRNAs in response to cold acclimation and cold stress in Pomacea canaliculata	29
UnCoVar: a reproducible and scalable workflow for transparent and robust virus variant calling and lineage assignment using SARS-CoV-2 as an example	29
Analysis of autosomal dominant genes impacted by copy number loss in 24,844 fetuses without structural abnormalities	29
Validation of reference genes for whole blood gene expression analysis in cord blood of preterm and full-term neonates and peripheral blood of healthy adults	29
Comparative analysis of the complete mitochondrial genome sequences and anther development cytology between maintainer and Ogura-type cytoplasm male-sterile cabbage (B. oleracea Var. capitata)	29
Paired guide RNA CRISPR-Cas9 screening for protein-coding genes and lncRNAs involved in transdifferentiation of human B-cells to macrophages	29
Host-specific co-evolution likely driven by diet in Buchnera aphidicola	28
Genome-wide analysis of the P450 gene family in tea plant (Camellia sinensis) reveals functional diversity in abiotic stress	28
Leveraging family history in genetic association analyses of binary traits	28
Comparative transcriptomic analysis of germinating rice seedlings to individual and combined anaerobic and cold stress	28
Effects of hibernation on two important contractile tissues in tibetan frogs, Nanorana parkeri: a perspective from transcriptomics and metabolomics approaches	28
A comparative analysis of differentially expressed mRNAs, miRNAs and circRNAs provides insights into the key genes involved in the high-altitude adaptation of yaks	28

Integrated Metabolomic and transcriptomic analyses reveal deoxycholic acid promotes transmissible gastroenteritis virus infection by inhibiting phosphorylation of NF-κB and STAT3	28
Ascites-derived hsa-miR-181a-5p serves as a prognostic marker for gastric cancer-associated malignant ascites	28
Genome-wide analysis of acid tolerance genes of Enterococcus faecalis with RNA-seq and Tn-seq	28
Effective population size in field pea	28
Diet-induced changes in the jejunal microbiota of developing broilers reduce the abundance of Enterococcus hirae and Enterococcus faecium	28
Genome-wide identification of biotin carboxyl carrier subunits of acetyl-CoA carboxylase in Brassica and their role in stress tolerance in oilseed Brassica napus	28
During evolution from the earliest tetrapoda, newly-recruited genes are increasingly paralogues of existing genes and distribute non-randomly among the chromosomes	27
Zinc supplementation modifies brain tissue transcriptome of Apis mellifera honeybees	27
Transcriptomic comparison of ovarian granulosa cells between adult sheep and prepubertal lambs	27
Whole-genome sequencing reveals genomic diversity and selection signatures in Xia’nan cattle	27
Comparative genomic analysis of the Growth-Regulating Factors-Interacting Factors (GIFs) in six Salicaceae species and functional analysis of PeGIF3 reveals their regulatory role in Populus heteromorp	27
Polygenic risk score model for renal cell carcinoma in the Korean population and relationship with lifestyle-associated factors	27
Machine learning approaches to predict the Plant-associated phenotype of Xanthomonas strains	27
Integrative microRNAome analysis of skeletal muscle of Colossoma macropomum (tambaqui), Piaractus mesopotamicus (pacu), and the hybrid tambacu, based on next-generation sequencing data	27
Signals of positive selection in genomes of palearctic Myotis-bats coexisting with a fungal pathogen	26
Predicting splicing patterns from the transcription factor binding sites in the promoter with deep learning	26
Transcriptome analysis of the Japanese eel (Anguilla japonica) during larval metamorphosis	26
spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data	26
A comparative plastome approach enhances the assessment of genetic variation in the Melilotus genus	26
Long-read PacBio genome sequencing of four environmental saprophytic Sporothrix species spanning the pathogenic clade	26
Gene expression profiling unveils the temporal dynamics of CIGB-300-regulated transcriptome in AML cell lines	26
Transcriptional responses are oriented towards different components of the rearing environment in two Drosophila sibling species	26
Effects of differentially expressed microRNAs induced by rootstocks and silicon on improving chilling tolerance of cucumber seedlings (Cucumis sativus L.)	26
The nuclear and mitochondrial genome assemblies of Tetragonisca angustula (Apidae: Meliponini), a tiny yet remarkable pollinator in the Neotropics	25
Transcriptome of different fruiting stages in the cultivated mushroom Cyclocybe aegerita suggests a complex regulation of fruiting and reveals enzymes putatively involved in fungal oxylipin biosynthes	25
Whole-genome identification and expression profiling of growth-regulating factor (GRF) and GRF-interacting factor (GIF) gene families in Panax ginseng	25
Severe pantothenic acid deficiency induces alterations in the intestinal mucosal proteome of starter Pekin ducks	25
Genomic analysis based on chromosome-level genome assembly reveals Myrtaceae evolution and terpene biosynthesis of rose myrtle	25
Marine gregarine genomes reveal the breadth of apicomplexan diversity with a partially conserved glideosome machinery	25
Systematic analysis and expression profiles of TCP gene family in Tartary buckwheat (Fagopyrum tataricum (L.) Gaertn.) revealed the potential function of FtTCP15 and FtTCP18 in response to abiotic str	25
A comparative transcriptomic analysis reveals a coordinated mechanism activated in response to cold acclimation in common vetch (Vicia sativa L.)	25
Metagenomics of gut microbiome for migratory seagulls in Kunming city revealed the potential public risk to human health	25
Genome-wide association study provided insights into the polled phenotype and polled intersex syndrome (PIS) in goats	25
The draft genome of the specialist flea beetle Altica viridicyanea (Coleoptera: Chrysomelidae)	25
Genome-wide characterization and expression analysis of α-amylase and β-amylase genes underlying drought tolerance in cassava	24
RNA-binding proteins potentially regulate the alternative splicing of apoptotic genes during knee osteoarthritis progression	24
Characterization of a novel root-associated diazotrophic rare PGPR taxa, Aquabacter pokkalii sp. nov., isolated from pokkali rice: new insights into the plant-associated lifestyle and brackish adaptat	24
A novel hierarchical network-based approach to unveil the complexity of functional microbial genome	23
Transcriptome dynamics in early in vivo developing and in vitro produced porcine embryos	23
Biological factors in the synthetic construction of overlapping genes	23
Identification of crucial circRNAs in skeletal muscle during chicken embryonic development	23
From CFTR to a CF signalling network: a systems biology approach to study Cystic Fibrosis	23
Genome-wide analyses reveal a strong association between LEPR gene variants and body fat reserves in ewes	23
High-quality chromosome-level de novo assembly of the Trifolium repens	23
SARS-CoV-2 surveillance in Italy through phylogenomic inferences based on Hamming distances derived from pan-SNPs, -MNPs and -InDels	23
Identification of drought responsive Elaeis guineensis WRKY transcription factors with sensitivity to other abiotic stresses and hormone treatments	23
Investigating the causal impact of gut microbiota on glioblastoma: a bidirectional Mendelian randomization study	23
Ectopic and transient expression of VvDIR4 gene in Arabidopsis and grapes enhances resistance to anthracnose via affecting hormone signaling pathways and lignin production	23
Integrated transcriptome and endogenous hormone analyses reveal the factors affecting the yield of Camellia oleifera	23
Transcriptional changes in the peripheral blood leukocytes from Brangus cattle before and after tick challenge with Rhipicephalus australis	23
Genome-wide identification and expression analysis of the B-box transcription factor gene family in grapevine (Vitis vinifera L.)	23
Genetic diversity analysis of Inner Mongolia cashmere goats (Erlangshan subtype) based on whole genome re-sequencing	23
Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting soybean genotypes subjected to phosphate starvation	23
Development and application of specific FISH probes for karyotyping Psathyrostachys huashanica chromosomes	23
Transcriptomic and genomic analysis provides new insights in molecular and genetic processes involved in zucchini ZYMV tolerance	23
Neurogenomic divergence during speciation by reinforcement of mating behaviors in chorus frogs (Pseudacris)	22
Mitochondrial point heteroplasmy: insights from deep-sequencing of human replicate samples	22
Jasmonate signaling drives defense responses against Alternaria alternata in chrysanthemum	22
Genome-wide screening of the RNase T2 gene family and functional analyses in jujube (Ziziphus jujuba Mill.)	22
Time series-based hybrid ensemble learning model with multivariate multidimensional feature coding for DNA methylation prediction	22
Essential genes identification model based on sequence feature map and graph convolutional neural network	22
Recurrent neural network for predicting absence of heterozygosity from low pass WGS with ultra-low depth	22
Integrated transcriptomics contrasts fatty acid metabolism with hypoxia response in β-cell subpopulations associated with glycemic control	22
RGS4 impacts carbohydrate and siderophore metabolism in Trichoderma reesei	22
How imputation can mitigate SNP ascertainment Bias	22
Insights into the genetic variability and evolutionary dynamics of tomato spotted wilt orthotospovirus in China	22
Similar proteome expression profiles of the aggregated lymphoid nodules area and Peyer’s patches in Bactrian camel	22
Hi-C analysis of genomic contacts revealed karyotype abnormalities in chicken HD3 cell line	22
Suppression of pyrrolidine ring biosynthesis and its effects on gene expression and subsequent accumulation of anatabine in leaves of tobacco (N. tabacum L.)	21
peaksat: an R package for ChIP-seq peak saturation analysis	21
Modeling exercise using optogenetically contractible Drosophila larvae	21
Performance comparison of Agilent new SureSelect All Exon v8 probes with v7 probes for exome sequencing	21
A long-read sequencing and SNP haplotype-based novel preimplantation genetic testing method for female ADPKD patient with de novo PKD1 mutation	21
Transcriptome analysis of Populus × canadensis ‘Zhongliao1’ in response to low temperature stress	21
scMEB: a fast and clustering-independent method for detecting differentially expressed genes in single-cell RNA-seq data	21
Comparative analysis of whole blood transcriptomics between European and local Caribbean pigs in response to feed restriction in a tropical climate	21
Assembly-free rapid differential gene expression analysis in non-model organisms using DNA-protein alignment	21
Restriction site-associated DNA sequencing technologies as an alternative to low-density SNP chips for genomic selection: a simulation study in layer chickens	20
A high-quality de novo genome assembly based on nanopore sequencing of a wild-caught coconut rhinoceros beetle (Oryctes rhinoceros)	20
Transcriptomic analysis of glucosidase II beta subunit (GluIIß) knockout A549 cells reveals its roles in regulation of cell adhesion molecules (CAMs) and anti-tumor immunity	20

MIR396-GRF/GIF enhances in planta shoot regeneration of Dendrobium catenatum	20
Chromosome-level assembly of the Rangifer tarandus genome and validation of cervid and bovid evolution insights	20
Quantitative proteome profiling reveals molecular hallmarks of egg quality in Atlantic halibut: impairments of transcription and protein folding impede protein and energy homeostasis during early deve	20
Genetic diversity and structure of mongolian gazelle (Procapra gutturosa) populations in fragmented habitats	20
Identification and characterization of amphibian SLC26A5 using RNA-Seq	20
A genome-wide study of the lipoxygenase gene families in Medicago truncatula and Medicago sativa reveals that MtLOX24 participates in the methyl jasmonate response	20
Identification of novel genes involved in neutral lipid storage by quantitative trait loci analysis of Saccharomyces cerevisiae	20
Massive expansion of P-selectin genes in two Venerida species, Sinonovacula constricta and Mercenaria mercenaria: evidence from comparative genomics of Bivalvia	20
Assessment of beneficial effects and identification of host adaptation-associated genes of Ligilactobacillus salivarius isolated from badgers	20
Genome sequences of BCG Pasteur ATCC 35734 and its derivative, the vaccine candidate BCGΔBCG1419c	20
Genomic insight into the nocturnal adaptation of the black-crowned night heron (Nycticorax nycticorax)	20
Comparative study of lysine acetylation in Vesicomyidae clam Archivesica marissinica and the manila clam Ruditapes philippinarum: adaptation mechanisms in cold seep environments	20
Genome-wide identification and expression analysis of the SPL transcription factor family and its response to abiotic stress in Pisum sativum L	20
Understanding host response to infectious salmon anaemia virus in an Atlantic salmon cell line using single-cell RNA sequencing	20
Characterisation of the Paenarthrobacter nicotinovorans ATCC 49919 genome and identification of several strains harbouring a highly syntenic nic-genes cluster	20
Physiological attributes and transcriptomics analyses reveal the mechanism response of Helictotrichon virescens to low temperature stress	20
Data normalization for addressing the challenges in the analysis of single-cell transcriptomic datasets	20
Characteristics of DNA macro-alterations in breast cancer with liver metastasis before treatment	20
A targeted antibody-based array reveals a serum protein signature as biomarker for adolescent idiopathic scoliosis patients	20
Disentangling the aging gene expression network of termite queens	20
Insertion of an endogenous Jaagsiekte sheep retrovirus element into the BCO2 - gene abolishes its function and leads to yellow discoloration of adipose tissue in Norwegian Spælsau (Ovis aries)	20
De novo assembly and annotation of the singing mouse genome	19
Single nucleotide polymorphisms in the KRT82 promoter region modulate irregular thickening and patchiness in the dorsal skin of New Zealand rabbits	19
Whole blood transcriptome profiling identifies candidate genes associated with alopecia in male giant pandas (Ailuropoda melanoleuca)	19
Genome-wide characterization of regulator of chromosome condensation 1 (RCC1) gene family in Artemisia annua L. revealed a conservation evolutionary pattern	19
Cellular clarity: a logistic regression approach to identify root epidermal regulators of iron deficiency response	19
Microsatellite density landscapes illustrate short tandem repeats aggregation in the complete reference human genome	19
Characterizing virulence differences in a parasitoid wasp through comparative transcriptomic and proteomic	19
Chromosome-level genome assemblies of two parasitoid biocontrol wasps reveal the parthenogenesis mechanism and an associated novel virus	19
Integrating bioinformatic resources to identify characteristics of rheumatoid arthritis-related usual interstitial pneumonia	19
ProEnd: a comprehensive database for identifying HbYX motif-containing proteins across the tree of life	19
Genome-wide identification of AP2/ERF gene family in Coptis Chinensis Franch reveals its role in tissue-specific accumulation of benzylisoquinoline alkaloids	19
Comparative analysis of novel and common reference genes in adult tissues of the mussel Mytilus galloprovincialis	19
Circular and L50-like leaderless enterocins share a common ABC-transporter immunity gene	19
Genetic diversities and drug resistance in Mycobacterium bovis isolates from zoonotic tuberculosis using whole genome sequencing	19
A gene mutation-based risk model for prognostic prediction in liver metastases	19
Analysis of Gyimes Csango population samples on a high-resolution genome-wide basis	19
Brain fatty acid and transcriptome profiles of pig fed diets with different levels of soybean oil	19
Comparative transcriptome analysis of two Daphnia galeata genotypes displaying contrasting phenotypic variation induced by fish kairomones in the same environment of the Han River, Korea	19
Identification and validation of qRT-PCR reference genes for analyzing grape infection with gray mold	19
Chloroplast genome sequence of triploid Toxicodendron vernicifluum and comparative analyses with other lacquer chloroplast genomes	19
Sequencing and analysis of the complete mitochondrial genomes of Toona sinensis and Toona ciliata reveal evolutionary features of Toona	19
Imprinted Dlk1-Gtl2 cluster miRNAs are potential epigenetic regulators of lamb fur quality	19
Genome-wide identification, expression analysis of the R2R3-MYB gene family and their potential roles under cold stress in Prunus sibirica	19
Gene coexpression network during ontogeny in the yellow fever mosquito, Aedes aegypti	19
Genetic correlation for alcohol consumption between Europeans and East Asians	19
Deregulated RNAs involved in sympathetic regulation of sepsis-induced acute lung injury based on whole transcriptome sequencing	19
Identifying transcription factors with cell-type specific DNA binding signatures	19
Genome-wide identification of CAMTA genes and their expression dependence on light and calcium signaling during seedling growth and development in mung bean	19
Illuminating the biosynthesis pathway genes involved in bioactive specific monoterpene glycosides in Paeonia veitchii Lynch by a combination of sequencing platforms	19
Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs	18
Transcriptomics analysis reveals the signal transduction mechanism of brassinolides in tea leaves and its regulation on the growth and development of Camellia sinensis	18
Construction of the first high-density SNP genetic map and identification of QTLs for the natural rubber content in Taraxacum kok-saghyz Rodin	18
Analysis of asymptomatic Drosophila models for ALS and SMA reveals convergent impact on functional protein complexes linked to neuro-muscular degeneration	18
Two simple methods to improve the accuracy of the genomic selection methodology	18
Telomere-to-telomere assembly of the genome of an individual Oikopleura dioica from Okinawa using Nanopore-based sequencing	18
Comparison of capture-based mtDNA sequencing performance between MGI and illumina sequencing platforms in various sample types	18
Transcriptional dynamics of transposable elements when converting fibroblast cells of Macaca mulatta to neuroepithelial stem cells	18
Long non-coding RNA pairs to assist in diagnosing sepsis	18
Frequent tRNA gene translocation towards the boundaries with control regions contributes to the highly dynamic mitochondrial genome organization of the parasitic lice of mammals	18
Genomic dissection of the correlation between milk yield and various health traits using functional and evolutionary information about imputed sequence variants of 34,497 German Holstein cows	18
Introgression of pigs in Taihu Lake region possibly contributed to the improvement of fertility in Danish Large White pigs	18
Dynamic transcriptome and histomorphology analysis of developmental traits of hindlimb thigh muscle from Odorrana tormota and its adaptability to different life history stages	18
Genomic surveillance of Rift Valley fever virus: from sequencing to lineage assignment	18
An autosomal recessive variant in PYGM causes myophosphorylase deficiency in Red Angus composite cattle	18
GCSscore: an R package for differential gene expression analysis in Affymetrix/Thermo-Fisher whole transcriptome microarrays	18
Structural and gene composition variation of the complete mitochondrial genome of Mammillaria huitzilopochtli (Cactaceae, Caryophyllales), revealed by de novo assembly	18
Genetic influences on alcohol flushing in East Asian populations	18
The transcriptomic profile of Spodoptera frugiperda differs in response to a novel insecticide, cyproflanilide, compared to chlorantraniliprole and avermectin	18
Sea of opportunities: marine genomics in an era of global environmental change	18
Transcriptomics and gut microbiome analysis of the edible herb Bidens pilosa as a functional feed additive to promote growth and metabolism in tilapia (Oreochromis spp.)	18
Genome-wide characterization of the MBF1 gene family and its expression pattern in different tissues and stresses in Zanthoxylum armatum	18
The transcriptional landscape of a hepatoma cell line grown on scaffolds of extracellular matrix proteins	18
Genome-wide identification of JAZ gene family members in autotetraploid cultivated alfalfa (Medicago sativa subsp. sativa) and expression analysis under salt stress	17
Comprehensive analysis of the long noncoding RNA-associated competitive endogenous RNA network in the osteogenic differentiation of periodontal ligament stem cells	17
scCompressSA: dual-channel self-attention based deep autoencoder model for single-cell clustering by compressing gene–gene interactions	17
Transcriptomic and proteomic strategies to reveal the mechanism of Gymnocypris przewalskii scale development	17
Intestinal cell diversity and treatment responses in a parasitic nematode at single cell resolution	17
Combining GWAS and comparative genomics to fine map candidate genes for days to flowering in mung bean	17
Chloroplast genomes of five Oedogonium species: genome structure, phylogenetic analysis and adaptive evolution	17
Immune system modulation & virus transmission during parasitism identified by multi-species transcriptomics of a declining insect biocontrol system	17
Chimeras in Merlot grapevine revealed by phased assembly	17
Genome-wide analysis of the GLP gene family and overexpression of GLP1-5–1 to promote lignin accumulation during early somatic embryo development in Dimocarpus longan	17
Population genetic study of 17 Y-STR Loci of the Sorani Kurds in the Province of Sulaymaniyah, Iraq	17
Temporal expression study of miRNAs in the crown tissues of winter wheat grown under natural growth conditions	17
The phylogenomic landscape of extended-spectrum β-lactamase producing Citrobacter species isolated from surface water	17
Genomic insights into the antimicrobial resistance and virulence of Helicobacter pylori isolates from gastritis patients in Pereira, Colombia	17
Integrative analyses of metabolome and transcriptome reveal the dynamic accumulation and regulatory network in rhizomes and fruits of Polygonatum cyrtonema Hua	17
Comprehensive identification of maize ZmE2F transcription factors and the positive role of ZmE2F6 in response to drought stress	17
Comparison of assembly platforms for the assembly of the nuclear genome of Trichoderma harzianum strain PAR3	17
Morphological, physiological, and transcriptional responses to low nitrogen stress in Populus deltoides Marsh. clones with contrasting nitrogen use efficiency	17
Genomic data integration tutorial, a plant case study	17
Differential splicing of neuronal genes in a Trem2*R47H mouse model mimics alterations associated with Alzheimer’s disease	17
DNA methylome and transcriptome identified Key genes and pathways involved in Speckled Eggshell formation in aged laying hens	17
Virome analysis of Desmodus rotundus tissue samples from the Amazon region	17