BMC Genomics

Article	Citations
Proteomic networks and related genetic variants associated with smoking and chronic obstructive pulmonary disease	206
Alteration of chromosome structure impacts gene expressions implicated in pancreatic ductal adenocarcinoma cells	138
A putative scenario of how de novo protein-coding genes originate in the Saccharomyces cerevisiae lineage	130
The expression of RBPJ and its potential role in rheumatoid arthritis	120
Analysis of asymptomatic Drosophila models for ALS and SMA reveals convergent impact on functional protein complexes linked to neuro-muscular degeneration	114
The effect of induced molting on the testicular physiological remodeling in no-semen roosters	111
Correction: Alterations in exosomal miRNA profile upon epithelial-mesenchymal transition in human lung cancer cell lines	102
Correction to: Spatiotemporal expression profle of novel and known small RNAs throughout rice plant development focussing on seed tissues	93
Large-scale integration of meta-QTL and genome-wide association study identifies genomic regions and candidate genes for photosynthetic efficiency traits in bread wheat	70
Caregiver-child interaction and early childhood development among preschool children in rural China: the possible role of blood epigenome-wide DNA methylation	70
Autophagy is involved in the toxicity of the biocontrol agent GC16 against Tetranychus pueraricola (Acari: Tetranychidae) based on transcriptomic and proteomic analyses	66
Genome-wide association study provided insights into the polled phenotype and polled intersex syndrome (PIS) in goats	65
The multi-omics signatures of telomere length in childhood	64
Detection of potential functional variants based on systems-biology: the case of feed efficiency in beef cattle	62
Genome-wide association analysis reveals a novel QTL CsPC1 for pericarp color in cucumber	57
Genome-wide analysis of the BES1 gene family reveals their involvement in grain development of Triticum aestivum L	56
Ascites-derived hsa-miR-181a-5p serves as a prognostic marker for gastric cancer-associated malignant ascites	54
Population genetic study of 17 Y-STR Loci of the Sorani Kurds in the Province of Sulaymaniyah, Iraq	54
Genetic effect of an InDel in the promoter region of the NUDT15 and its effect on myoblast proliferation in chickens	53
A haplotype-resolved chromatin landscape connects cis-regulatory variants to trait variation in Citrus	53
Small open reading frames: a comparative genetics approach to validation	52
Phylogeographic relationships and the evolutionary history of the Carassius auratus complex with a newly born homodiploid raw fish (2nNCRC)	52
Introgression of pigs in Taihu Lake region possibly contributed to the improvement of fertility in Danish Large White pigs	51
Effects of hibernation on two important contractile tissues in tibetan frogs, Nanorana parkeri: a perspective from transcriptomics and metabolomics approaches	49
Dynamic physiological and transcriptomic changes reveal memory effects of salt stress in maize	48

Transcriptome analysis reveals fluid shear stress (FSS) and atherosclerosis pathway as a candidate molecular mechanism of short-term low salinity stress tolerance in abalone	47
Integrative multi-omics approach for identifying molecular signatures and pathways and deriving and validating molecular scores for COVID-19 severity and status	47
Biological factors in the synthetic construction of overlapping genes	46
Identification of candidate proteins influencing spermatogenesis in Shandong black cattle via integrated multiomics analysis	46
Assembly and comparative analysis of the complete mitochondrial genome of Brassica rapa var. Purpuraria	45
Genome-wide identification and stress response analysis of cyclophilin gene family in apple (Malus × domestica)	45
Evolutionary genetics of flipper forelimb and hindlimb loss from limb development-related genes in cetaceans	44
HiFiBGC: an ensemble approach for improved biosynthetic gene cluster detection in PacBio HiFi-read metagenomes	44
Integrated genome and transcriptome analysis reveals pathogenic mechanisms of Calonectria eucalypti in Eucalyptus leaf blight	44
A catalog of gene editing sites and genetic variations in editing sites in model organisms	43
RNA-Seq analysis of the pyloric caecum, liver, and muscle reveals molecular mechanisms regulating fillet color in rainbow trout	42
Genome assembly and annotation of Babesia rossi, a protozoan parasite for canine babesiosis	42
Integrated analysis of the transcriptome and hormone metabolome elucidates the regulatory mechanisms governing walnut bud germination	42
Identification and expression analysis of the glycosyltransferase GT43 family members in bamboo reveal their potential function in xylan biosynthesis during rapid growth	41
Transcriptional response of murine microglia in Alzheimer’s disease and inflammation	41
Correction: Comparative transcriptome analysis of skin color-associated genes in leopard coral grouper (Plectropomus leopardus)	40
Genomic insights into the antimicrobial resistance and virulence of Helicobacter pylori isolates from gastritis patients in Pereira, Colombia	40
Transcriptomic and genomic analysis provides new insights in molecular and genetic processes involved in zucchini ZYMV tolerance	40
Genome-wide and comparative phylogenetic analysis of senescence-associated NAC transcription factors in sunflower (Helianthus annuus)	40
The effects of runs-of-homozygosity on pig domestication and breeding	39
Expression of ABC transporters negatively correlates with ectoine biosynthesis in Halomonas campaniensis under NaCl and ultraviolet mutagenesis treatments revealed by transcriptomic and proteomics com	39
Dexamethasone-induced whitening of rabbit brown adipose tissue: leptin resistance and mitochondrial dysfunction	39
Temperature-induced variation in the transcriptome of maritime pine (Pinus pinaster Ait.) embryogenic masses modulates the phenotype of the derived plants	39
Diversity and evolution analysis of RNA viruses in three wheat aphid species	39
SPLHRNMTF: robust orthogonal non-negative matrix tri-factorization with self-paced learning and dual hypergraph regularization for predicting miRNA-disease associations	38
A targeted antibody-based array reveals a serum protein signature as biomarker for adolescent idiopathic scoliosis patients	38
Genome-wide identification and evolutionary analysis of NRAMP family genes in tomato (Solanum lycopersicum L.) under cadmium and salt stress	38
Identification and characterization of catalase genes involved in the response to heat stress in Tetranychus urticae (Acari: Tetranychidae)	37
Clonostachys rosea ‘omics profiling: identification of putative metabolite-gene associations mediating its in vitro antagonism against Fusarium graminearum	37
Genome-wide identification and expression analysis of the SPL transcription factor family and its response to abiotic stress in Pisum sativum L	37
Genetic architecture of end-use quality traits in soft white winter wheat	37
Identification of regulatory loci and candidate genes related to body weight traits in broilers based on different models	37
Quantitative trait loci and candidate genes for yield-related traits of upland cotton revealed by genome-wide association analysis under drought conditions	37
Cold exposure induces lipid dynamics and thermogenesis in brown adipose tissue of goats	37
Genome-wide identification of AP2/ERF gene family in Coptis Chinensis Franch reveals its role in tissue-specific accumulation of benzylisoquinoline alkaloids	37
From CFTR to a CF signalling network: a systems biology approach to study Cystic Fibrosis	36
Genome-wide identification and expression analysis of the NRT genes in Ginkgo biloba under nitrate treatment reveal the potential roles during calluses browning	35
Multi-omics insights into functional alterations of the liver in growth-retarded offspring: transcriptomic, epigenetic and metabolomic profiles	35
XCVATR: detection and characterization of variant impact on the Embeddings of single -cell and bulk RNA-sequencing samples	35
ProEnd: a comprehensive database for identifying HbYX motif-containing proteins across the tree of life	35
De novo assembly and annotation of the singing mouse genome	35
Insights into the taxonomy and virulence-related genetic profiles in 97 Cupriavidus strains through comparative genomic analysis	35
Detecting antibody reactivities in Phage ImmunoPrecipitation Sequencing data	35
peaksat: an R package for ChIP-seq peak saturation analysis	35
Genome-wide QTL and eQTL mapping reveal genes associated with growth rate trait of the Pacific white shrimp (Litopenaeus vannamei)	34
RNA sequencing analysis in chicken spleen infected with Newcastle disease virus reveals genotype-specific immune response	34
Metabolomics, phytohormone and transcriptomics strategies to reveal the mechanism of barley heading date regulation to responds different photoperiod	34
Taxonomy, comparative genomics of Mullein (Verbascum, Scrophulariaceae), with implications for the evolution of Verbascum and Lamiales	33
Examining parent-of-origin effects on transcription and RNA methylation in mediating aggressive behavior in honey bees (Apis mellifera)	33
Shared and distinct interactions of type 1 and type 2 Epstein-Barr Nuclear Antigen 2 with the human genome	33

Genome-wide identification and expression analysis reveals spinach brassinosteroid-signaling kinase (BSK) gene family functions in temperature stress response	33
A novel isatin Schiff based cerium complex: synthesis, characterization, antimicrobial activity and molecular docking studies	33
plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style	32
Comprehensive analysis of RNA m6A methylation in pressure overload-induced cardiac hypertrophy	32
Understanding host response to infectious salmon anaemia virus in an Atlantic salmon cell line using single-cell RNA sequencing	32
Genome-wide association study identifies key quantitative trait loci (QTL) for fruit morphometric traits in avocado (Persea spp.)	32
Salinity-responsive histone PTMs identified in the gills and gonads of Mozambique tilapia (Oreochromis mossambicus)	32
Genetic and genomic analysis of reproduction traits in holstein cattle using SNP chip data and imputed sequence level genotypes	32
Characterization of rumen microbiome and immune genes expression of crossbred beef steers with divergent residual feed intake phenotypes	32
Genomic consequences of intensive inbreeding in miniature inbred pigs	31
Genome-wide landscape of runs of homozygosity and differentiation across Egyptian goat breeds	31
Genome-wide identification, expression analysis of the R2R3-MYB gene family and their potential roles under cold stress in Prunus sibirica	31
An in-depth bioinformatic analysis of the novel recombinant lumpy skin disease virus strains: from unique patterns to established lineage	31
Molecular characterization of recombinant LSDV isolates from 2022 outbreak in Indonesia through phylogenetic networks and whole-genome SNP-based analysis	31
Genome-wide scan for selection signatures reveals novel insights into the adaptive capacity characteristics in three Chinese cattle breeds	30
Revised time estimation of the ancestral human chromosome 2 fusion	30
UTR-Insight: integrating deep learning for efficient 5′ UTR discovery and design	29
Genome-wide identification of polyamine metabolism and ethylene synthesis genes in Chenopodium quinoa Willd. and their responses to low-temperature stress	29
Characterization of fine geographic scale population genetics in sugar kelp (Saccharina latissima) using genome-wide markers	29
Genome-wide analysis of polyamine biosynthesis genes in wheat reveals gene expression specificity and involvement of STRE and MYB-elements in regulating polyamines under drought	29
Relationship and distribution of Salmonella enterica serovar I 4,[5],12:i:- strain sequences in the NCBI Pathogen Detection database	29
Genome-wide analysis of the P450 gene family in tea plant (Camellia sinensis) reveals functional diversity in abiotic stress	29
Beta-galactosidase gene family genome-wide identification and expression analysis of members related to fruit softening in melon (Cucumis melo L.)	29
Negative effect of seasonal heat stress on testis morphology and transcriptomes in Angora rabbit	29
Gut microbiota profiling variated during colorectal cancer development in mouse	29
Construction of the first high-density SNP genetic map and identification of QTLs for the natural rubber content in Taraxacum kok-saghyz Rodin	29
Differential miRNA expression profiles in the bone marrow of Beagle dogs at different stages of Toxocara canis infection	29
Genomic analysis of severe COVID-19 considering or not asthma comorbidity: GWAS insights from the BQC19 cohort	28
Genome sequencing and comparative genomics reveal insights into pathogenicity and evolution of Fusarium zanthoxyli, the causal agent of stem canker in prickly ash	28
Identification of key genes for triacylglycerol biosynthesis and storage in herbaceous peony (Paeonia lactifolra Pall.) seeds based on full-length transcriptome	28
Microscale total genomic DNA was used to explore the complete mitochondrial genomes of two biting midge species of the family Ceratopogonidae (Insecta: Diptera)	28
Potential mutagenicity of aflatoxin B1 in Egyptian spices	28
Prediction of lipase-specific foldase-dependence in bacterial lipase subfamilies I.1 and I.2	28
Alternative splicing perspective to prey preference of environmentally friendly biological agent Cryptolaemus montrouzieri	28
RNA-Seq uncovers endogenous NO-induced hormone signal transduction and carbon metabolism in response to PEG stress in alfalfa	28
Genome-wide identification of heterotrimeric G protein genes in castor (Ricinus communis L.) and expression patterns under salt stress	28
A probabilistic approach to visualize the effect of missing data on PCA in ancient human genomics	28
An insight into the draft genome of the Oriental rat flea, Xenopsylla cheopis, together with its Wolbachia endosymbiont	27
Whole exome sequence reveals genetic profiles of primary cardiomyopathy and genotype-phenotype association in Chinese population	27
Genome-wide identification of R2R3-MYB gene family and association with anthocyanin biosynthesis in Brassica species	27
Detection and evaluation of parameters influencing the identification of heterozygous-enriched regions in Holstein cattle based on SNP chip or whole-genome sequence data	27
SWATH-MS based proteomics reveals the role of photosynthesis related proteins and secondary metabolic pathways in the colored leaves of sweet olive (Osmanthus fragrans)	27
Survival of the fittest: genomic investigations of the bay scallop reveal a shift in population structure through a summer mortality event	27
Canine hyper-sociability structural variants associated with altered three-dimensional chromatin state	27
Genome-wide identification, characterization, and expression analysis of the MADS-box gene family in grass pea (Lathyrus sativus) under salt stress conditions	27
Sex-specific differential gene expression during stolonization in the branching syllid Ramisyllis kingghidorahi (Annelida, Syllidae)	27
Haplotype-resolved genome of Mimosa bimucronata revealed insights into leaf movement and nitrogen fixation	27
Comparative analysis of the whole transcriptome landscapes of muscle and adipose tissue in Qinchuan beef cattle	27
Genome-wide association study considering genotype-by-environment interaction for productive and reproductive traits using whole-genome sequencing in Nellore cattle	27
Correction: Genetic diversity and signatures of selection for heat tolerance and immune response in Iranian native chickens	27
Short-term impacts of embryonic thermal manipulation in mule duck, a kinetic study: new tools for metabolic programming	26
MitoCOMON: whole mitochondrial DNA sequencing by primer design and long overlapping amplicon assembly	26
Integrated microRNA and whole-transcriptome sequencing reveals the involvement of small and long non-coding RNAs in the fiber growth of ramie plant	26
Identification of sugar transporter MrSTP20 responding to high-salt stress and hexoses induction in apple rootstock (Malus robusta Rehd)	26
Transcriptome analysis of the endangered dung beetle Copris tripartitus (Coleoptera: Scarabaeidae) and characterization of genes associated to immunity, growth, and reproduction	26
MitoDelta: identifying mitochondrial DNA deletions at cell-type resolution from single-cell RNA sequencing data	26
Transcription factor-binding k-mer analysis clarifies the cell type dependency of binding specificities and cis-regulatory SNPs in humans	26
Identification of ARF family in blueberry and its potential involvement of fruit development and pH stress response	26
A transcriptome-wide analysis provides novel insights into how Metabacillus indicus promotes coral larvae metamorphosis and settlement	26
Long-read sequencing of extrachromosomal circular DNA and genome assembly of a Solanum lycopersicum breeding line revealed active LTR retrotransposons originating from S. Peruvianum L. introgressions	26
Chromosomal localization of cohesin is differentially regulated by WIZ, WAPL, and G9a	26
HTS and scRNA-seq revealed that the location and RSS quality of the mammalian TRBV and TRBJ genes impact biased rearrangement	26
Genome-wide identification and evolution of the tubulin gene family in Camelina sativa	26
Transcriptome analysis reveals key defense genes associated with resistance to banana blood disease	26
The different subtelomeric structure among 1RS arms in wheat-rye 1BL.1RS translocations affecting their meiotic recombination and inducing their structural variation	26
Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformis	26
Chemical composition determination and transcriptomic analyses provide insight into the differences between wild and grafted Semen Ziziphi Spinosae	26
Accuracy benchmark of the GeneMind GenoLab M sequencing platform for WGS and WES analysis	26
Performance comparison of four exome capture platforms on DNBSEQ-Series high throughput sequencer	26
Cyclin-dependent kinases (CDKs) are key genes regulating early development of Neptunea arthritica cumingii: evidence from comparative transcriptome and proteome analyses	26
Trehalose accumulation contributes to enhanced cold stress tolerance in Telenomus remus, a dominant egg parasitoid of Spodoptera frugiperda	26
Comparative transcriptomic analysis of the different developmental stages of ovary in the cuttlefish Sepia pharaonis	26
Defining super-enhancers by highly ranked histone H4 multi-acetylation levels identifies transcription factors associated with glioblastoma stem-like properties	25
Genomic formation of Tibeto-Burman speaking populations in Guizhou, Southwest China	25
The fiber diameter traits of Tibetan cashmere goats are governed by the inherent differences in stress, hypoxic, and metabolic adaptations: an integrative study of proteome and transcriptome	25
Genome-wide identification and molecular expression profile analysis of FHY3/FAR1 gene family in walnut (Juglans sigillata L.) development	25
Evaluation of methods to detect circular RNAs from single-end RNA-sequencing data	25
Transcriptome and WGCNA reveals the potential genetic basis of photoperiod-sensitive male sterility in soybean	25
Genome sequencing reveals novel causative structural and single nucleotide variants in Pakistani families with congenital hypogonadotropic hypogonadism	25
Integrative analysis of the steroidal alkaloids distribution and biosynthesis of bulbs Fritillariae Cirrhosae through metabolome and transcriptome analyses	25

Analysis of miRNAs in milk of four livestock species	25
Transcriptomic profiling reveals histone acetylation-regulated genes involved in somatic embryogenesis in Arabidopsis thaliana	25
Splenic comparative transcriptome analysis reveals the immunological mode of undomesticated Gayal (Bos frontalis) for adapting to harsh environments	25
Split Pool Ligation-based Single-cell Transcriptome sequencing (SPLiT-seq) data processing pipeline comparison	25
Genome-wide expression of the residual lung reacting to experimental Pneumonectomy	25
Single-nucleus RNA sequencing and lipidomics reveal characteristics of transcriptional and lipid composition in porcine longissimus dorsi muscle	24
Gene silencing, knockout and over-expression of a transcription factor ABORTED MICROSPORES (SlAMS) strongly affects pollen viability in tomato (Solanum lycopersicum)	24
Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA	24
Benchmarking full-length transcript single cell mRNA sequencing protocols	24
Genomic and functional insights into commensal streptococci with anti-pneumococcal activity	24
Effects of glutamate and aspartate on prostate cancer and breast cancer: a Mendelian randomization study	24
Immune transcriptomic profile in adult female pigs: dominance status has more influence than environmental enrichment	24
Star allele search: a pharmacogenetic annotation database and user-friendly search tool of publicly available 1000 Genomes Project biospecimens	24
Small RNA sequencing and bioinformatics analysis of RAW264.7-derived exosomes after Mycobacterium Bovis Bacillus Calmette-Guérin infection	24
A population genomics approach to unlock the genetic potential of lablab (Lablab purpureus (L.) Sweet), an underutilized tropical forage crop	24
Exploring the genetic basis of heterosis in eucalypt growth based on transcriptome analysis	24
Integrative transcriptomics and metabolomics reveal neuroendocrine-lipid crosstalk and adenosine signaling in broiler under heat stress	23
microRNA regulation of skin pigmentation in golden-back mutant of crucian carp from a rice-fish integrated farming system	23
Genome-wide identification of MBD gene family members in Eleutherococcus senticosus with their expression motifs under drought stress and DNA demethylation	23
Emanating candidate genes responsible for fruit quality traits in citrus through GBS-based genome wide association studies	23
A meta-analysis of public RNA-Seq data identifies conserved stress responses in rainbow trout	23
Longitudinal multi-omic changes in the transcriptome and proteome of peripheral blood cells after a 4 Gy total body radiation dose to Rhesus macaques	23
Integrated analysis of single-cell and bulk RNA sequencing data reveals prognostic characteristics of lysosome-dependent cell death-related genes in osteosarcoma	23
RNA sequencing and histology analysis provide insights into the formation of hollow fruits in cucumber	23
Seminal fluid proteins induce transcriptome changes in the Aedes aegypti female lower reproductive tract	23
Novel insights into the Leishmania infantum transcriptome diversity of protein-coding and non-coding sequences in both stages of parasite development using nanopore direct RNA sequencing	23
Comparative genotypic characterization related to antibiotic resistance phenotypes of clinical carbapenem-resistant Acinetobacter baumannii MTC1106 (ST2) and MTC0619 (ST25)	23
Characterization of Danube Swabian population samples on a high-resolution genome-wide basis	23
Transcriptome and co-expression network analysis reveal the genetic basis of cell wall components in maize stalks	23
Identification of knowledge gaps in whole-genome sequence analysis of multi-resistant thermotolerant Campylobacter spp.	23
Single-cell profiling reveals transcriptome dynamics during bovine oocyte growth	23
Near telomere-to-telomere genome assemblies of two Chlorella species unveil the composition and evolution of centromeres in green algae	23
Thirteen complete chloroplast genomes of the costaceae family: insights into genome structure, selective pressure and phylogenetic relationships	23
Bioinformatics analysis of the Microsporidia sp. MB genome: a malaria transmission-blocking symbiont of the Anopheles arabiensis mosquito	23
The landscape of the long non-coding RNAs in developing mouse retinas	23
Genome-wide detection of RNA editing events during the hair follicles cycle of Tianzhu white yak	22
Comparison of structural variants detected by PacBio-CLR and ONT sequencing in pear	22
Chlamydia suis undergoes interclade recombination promoting Tet-island exchange	22
A cross-tissue transcriptomic approach decodes glucocorticoid receptor-dependent links to human metabolic phenotypes	22
scQCEA: a framework for annotation and quality control report of single-cell RNA-sequencing data	22
Genome-wide identification, expression analysis, and functional study of the bZIP transcription factor family and its response to hormone treatments in pea (Pisum sativum L.)	22
Fusion_f5C-Pred: a dual-branch feature fusion framework for 5-formylcytosine modification sites prediction	22
Physiological and molecular mechanisms of leaf response to high-temperature stress in high-temperature-resistant soybean varieties	22
Comparative and phylogenetic study on the chloroplast genomes of CMS with the cytoplasm of Aegilops ovata and its maintainer line in wheat	22
The evolutionary dynamics of genome sizes and repetitive elements in Ensifera (Insecta: Orthoptera)	22
Assessment of DNA methylation in porcine immune cells reveals novel regulatory elements associated with cell-specific gene expression and immune capacity traits	22
Genome-wide analysis of the AP2/ERF gene family in Tritipyrum and the response of TtERF_B2-50 in salt-tolerance	22
Genomes of the Orestias pupfish from the Andean Altiplano shed light on their evolutionary history and phylogenetic relationships within Cyprinodontiformes	22
Characterization of a strain-specific CD-1 reference genome reveals potential inter- and intra-strain functional variability	22
Intron size minimisation in teleosts	22
Complete chloroplast genomes of 13 species of sect. Tuberculata Chang (Camellia L.): genomic features, comparative analysis, and phylogenetic relationships	22
Genome-wide identification of the NLR gene family in Haynaldia villosa by SMRT-RenSeq	22
TB-DROP: deep learning-based drug resistance prediction of Mycobacterium tuberculosis utilizing whole genome mutations	22
Genomic mining of Vibrio parahaemolyticus highlights prevalence of antimicrobial resistance genes and new genetic markers associated with AHPND and tdh + /trh + genotypes	22
Time-series transcriptomic analysis of Nile tilapia reveals the crucial roles of long non-coding RNA and transcription factor in response to Aeromonas veronii infection	21
Correction: Genome-wide association study for stayability at diferent calvings in Nellore beef cattle	21
Identification of lncRNA, miRNA and mRNA expression profiles and ceRNA Networks in small cell lung cancer	21
Integrated multi-omics analysis of metabolome and transcriptome profiles during bovine adipocyte differentiation reveals functional divergence of FADS2 isoforms in lipid metabolism regulation	21
Alternative splicing induces sample-level variation in gene–gene correlations	21
Genome-wide identification of SNPs associated with body weight in yak	21
Recombination fraction in pre-recombinant inbred lines (PRERIL) - revisiting a century old problem in genetics	21
Chloroplast genome comparison and taxonomic reassessment of Polygonatum sensu Lato (Asparagaceae): implications for molecular marker development in traditional medicinal plants	21
Organic acid accumulation pattern and its key genes in Chinese cherry fruits	21
Genome-wide association study identifies genomic regions associated with key reproductive traits in Korean Hanwoo cows	21
IL-33 priming and antigenic stimulation synergistically promote the transcription of proinflammatory cytokine and chemokine genes in human skin mast cells	21
The pan-genome of Mycobacterium avium subsp. paratuberculosis (Map) confirms ancestral lineage and reveals gene rearrangements within Map Type S	21
Findzx: an automated pipeline for detecting and visualising sex chromosomes using whole-genome sequencing data	21
Correction to: Characterization of the gut microbiome in a porcine model of thoracic spinal cord injury	21
Visualizing genomic evolution in Caenorhabditis through WormSynteny	21
Comprehensive analysis of the sucrose nonfermenting 1-related protein kinase 2 gene family in broomcorn millet (Panicum miliaceum L.) under abiotic stress conditions	21
Comprehensive analysis of long non-coding RNA and mRNA expression patterns during seminiferous tubules maturation in Guanzhong dairy goats	21
High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata	21
Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle	21
Multi-tissue metabolomic profiling reveals the crucial metabolites and pathways associated with scallop growth	21
Correction: Comparative genome-wide identification and characterization of SET domain-containing and JmjC domain-containing proteins in piroplasms	21
Genomic characterization and global relatedness of multidrug-resistant Salmonella Goldcoast ST2529	21
Pulmonary artery embolism: comprehensive transcriptomic analysis in understanding the pathogenic mechanisms of the disease	20
Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library	20
Genome-wide identification and expressional analysis of carotenoid cleavage oxygenase (CCO) gene family in Betula platyphylla under abiotic stress	20
Differential cold stress intensities drive unique morphological and transcriptomic changes in Zea mays root hairs	20
Conceptual framework for the insect metamorphosis from larvae to pupae by transcriptomic profiling, a case study of Helicoverpa armigera (Lepidoptera: Noctuidae)	20
Protein features fusion using attributed network embedding for predicting protein-protein interaction	20
From a large-scale genomic analysis of insertion sequences to insights into their regulatory roles in prokaryotes	20
High genetic diversity of the himalayan marmot relative to plague outbreaks in the Qinghai-Tibet Plateau, China	20
Comparative genomic analysis of immune-related genes and chemosensory receptors provides insights into the evolution and adaptation of four major domesticated Asian carps	20
The identification, adaptive evolutionary analyses and mRNA expression levels of homeobox (hox) genes in the Chinese mitten crab Eriocheir sinensis	20
Establishment and validation of the autophagy-related ceRNA network in irreversible pulpitis	20
Comparative analysis of complete chloroplast genomes of Synotis species (Asteraceae, Senecioneae) for identification and phylogenetic analysis	20
Gene fusion detection in long-read transcriptome sequencing data with GFvoter	20
Identification of key genes and metabolites involved in intramuscular fat deposition in Laiwu pigs through combined transcriptomic and lipidomic analyses	20
Transcriptomic basis of sex loss in the pea aphid	20
GM-lncLoc: LncRNAs subcellular localization prediction based on graph neural network with meta-learning	20
HKDE-LACM: a hybrid model for lactic acid bacteria classification via k-mer and DNABERT-2 embedding fusion with cyclic DE-BO optimization	20
Comparative genomics of Plasmodium yoelii nigeriensis N67 and N67C: genome-wide polymorphisms, differential gene expression, and drug resistance	20
Complement 3 (C3) within the hypothalamic arcuate nucleus is a potential key mediator of the effect of enhanced nutrition on reproductive development in young bull calves	20