Environmental Microbiology

(The H4-Index of Environmental Microbiology is 43. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 500 papers]. The publications cover those that have been published in the past four years, i.e., from 2019-10-01 to 2023-10-01.)
Soil pH and temperature regulate assembly processes of abundant and rare bacterial communities in agricultural ecosystems189
The bacterial sulfur cycle in expanding dysoxic and euxinic marine waters135
Differentiation strategies of soil rare and abundant microbial taxa in response to changing climatic regimes130
The plant endosphere world – bacterial life within plants112
High‐quality genome‐scale metabolic modelling of Pseudomonas putida highlights its broad metabolic capabilities108
Rare taxa maintain the stability of crop mycobiomes and ecosystem functions99
Fungal community demonstrates stronger dispersal limitation and less network connectivity than bacterial community in sediments along a large river99
Salinity controls soil microbial community structure and function in coastal estuarine wetlands89
Contrasting patterns and drivers of soil bacterial and fungal diversity across a mountain gradient86
Experimental evidence of microbial inheritance in plants and transmission routes from seed to phyllosphere and root77
The diversity and distribution of endophytes across biomes, plant phylogeny and host tissues: how far have we come and where do we go from here?77
Long‐term effects of nitrogen and phosphorus fertilization on soil microbial community structure and function under continuous wheat production76
Symbiodiniaceae‐bacteria interactions: rethinking metabolite exchange in reef‐building corals as multi‐partner metabolic networks71
Distinct assembly mechanisms underlie similar biogeographical patterns of rare and abundant bacteria in Tibetan Plateau grassland soils62
Iterative subtractive binning of freshwater chronoseries metagenomes identifies over 400 novel species and their ecologic preferences61
Rhizosphere microbiome functional diversity and pathogen invasion resistance build up during plant development58
Vibrio–bivalve interactions in health and disease57
Community succession of the grapevine fungal microbiome in the annual growth cycle56
Unravelling interspecies interactions across heterogeneities in complex biofilm communities56
Sulphide addition favours respiratory ammonification (DNRA) over complete denitrification and alters the active microbial community in salt marsh sediments55
An overview of siderophore biosynthesis among fluorescent Pseudomonads and new insights into their complex cellular organization55
Vibrio natriegens: an ultrafast‐growing marine bacterium as emerging synthetic biology chassis54
At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions53
Time‐resolved dual RNA‐seq of tissue uncovers Pseudomonas plecoglossicida key virulence genes in host‐pathogen interaction with Epinephelus coioides53
Farm animals and aquaculture: significant reservoirs of mobile colistin resistance genes53
Reduced redox‐dependent mechanism and glucose‐mediated reversal in gentamicin‐resistant Vibrio alginolyticus51
Ecogenomics of the SAR11 clade51
Interaction and assembly processes of abundant and rare microbial communities during a diatom bloom process50
Iron‐biomineralizing organelle in magnetotactic bacteria: function, synthesis and preservation in ancient rock samples50
Genomic characterization of three novel Desulfobacterota classes expand the metabolic and phylogenetic diversity of the phylum50
Methane oxidation in anoxic lake water stimulated by nitrate and sulfate addition49
Diversity and potential biogeochemical impacts of viruses in bulk and rhizosphere soils49
Vesiduction: the fourth way of HGT48
Revisiting the virulence hallmarks of Pseudomonas aeruginosa: a chronicle through the perspective of quorum sensing47
In hot water: effects of climate change on Vibrio–human interactions47
Genome‐resolved metagenomics and metatranscriptomics reveal niche differentiation in functionally redundant microbial communities at deep‐sea hydrothermal vents47
The importance of naturally attenuated SARS‐CoV‐2in the fight against COVID‐1946
Contribution of stochastic processes to the microbial community assembly on field‐collected microplastics45
Global analysis of the apple fruit microbiome: are all apples the same?44
Chromobacterium violaceum delivers violacein, a hydrophobic antibiotic, to other microbes in membrane vesicles44
Fertilization alters protistan consumers and parasites in crop‐associated microbiomes44
Beyond oil degradation: enzymatic potential of Alcanivorax to degrade natural and synthetic polyesters43
Initial butyrate producers during infant gut microbiota development are endospore formers43
Eco‐holobiont: A new concept to identify drivers of host‐associated microorganisms43
Metabolic mechanism of colistin resistance and its reverting in Vibrio alginolyticus43