OOIR: Observatory of International Research

Papers

(The median citation count of Current Genomics is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-03-01 to 2024-03-01.)

Article	Citations
Machine Learning in Healthcare	61
Metagenomic Exploration of Plastic Degrading Microbes for Biotechnological Application	52
The Comparison of Two Single-cell Sequencing Platforms: BD Rhapsody and 10x Genomics Chromium	47
Deciphering the Omics of Plant-Microbe Interaction: Perspectives and New Insights	42
iHyd-LysSite (EPSV): Identifying Hydroxylysine Sites in Protein Using Statistical Formulation by Extracting Enhanced Position and Sequence Variant Feature Technique	37
Engineered Microbes for Pigment Production Using Waste Biomass	30
Evolution of Sequence-based Bioinformatics Tools for Protein-protein Interaction Prediction	24
Extremely-randomized-tree-based Prediction of N6-methyladenosine Sites inSaccharomyces cerevisiae	24
Discrepant mRNA and Protein Expression in Immune Cells	22
Insights on Engineered Microbes in Sustainable Agriculture: Biotechnological Developments and Future Prospects	20
Unravelling the Role of Rhizospheric Plant-Microbe Synergy in Phytoremediation: A Genomic Perspective	19
Exploitation of Potential Extremophiles for Bioremediation of Xenobiotics Compounds: A Biotechnological Approach	18
Plant-microbe Interactions for Sustainable Agriculture in the Postgenomic Era	18
Exosomal miR-1298 and lncRNA-RP11-583F2.2 Expression in Hepatocellular Carcinoma	17
WITMSG: Large-scale Prediction of Human Intronic m6A RNA Methylation Sites from Sequence and Genomic Features	17
DNA Methylation and Bladder Cancer: Where Genotype does not Predict Phenotype	17
The Association of Sleep Disorders, Obesity and Sleep-Related Hypoxia with Cancer	16
A Brief Review of circRNA Biogenesis, Detection, and Function	16
Engineering Resistance Against Viruses in Field Crops Using CRISPRCas9	16
Extremophile – An Adaptive Strategy for Extreme Conditions and Applications	16
DNA Methylation Markers in Lung Cancer	16
The Experimentally Obtained Functional Impact Assessments of 5' Splice Site GT>GC Variants Differ Markedly from Those Predicted	15
Quantification of Naphthalene Dioxygenase (NahAC) and Catechol Dioxygenase (C23O) Catabolic Genes Produced by Phenanthrene-Degrading Pseudomonas fluorescens AH-40	14
Genome-wide Identification, Evolution and Expression Analysis of Basic Helix-loop-helix (bHLH) Gene Family in Barley (Hordeum vulgare L.)	14
Single-cell RNA Sequencing in Immunology	14

Understanding the Plant-microbe Interactions in CRISPR/Cas9 Era: Indeed a Sprinting Start in Marathon	13
The Journey from Two-Step to Multi-Step Phosphorelay Signaling Systems	12
Computational Identification of Lysine Glutarylation Sites Using Positive- Unlabeled Learning	11
Analysis of Genetic Variants in SCN1A, SCN2A, KCNK18, TRPA1 and STX1A as a Possible Marker of Migraine	11
Single-cell Sequencing in the Field of Stem Cells	11
Role of Bacterial-Fungal Consortium for Enhancement in the Degradation of Industrial Dyes	11
Functional Exploration of Chaperonin (HSP60/10) Family Genes and their Abiotic Stress-induced Expression Patterns in Sorghum bicolor	10
Recent Advances in Genome-wide Analyses of Plant Potassium Transporter Families	10
Plant RABs: Role in Development and in Abiotic and Biotic Stress Responses	9
Omics Insight on Fusarium Head Blight of Wheat for Translational Research Perspective	9
Recent Advances of Genetic Resources, Genes and Genetic Approaches for Flooding Tolerance in Rice	9
Post-translational Modifications of bZIP Transcription Factors in Abscisic Acid Signaling and Drought Responses	8
Recent Development of Machine Learning Methods in Microbial Phosphorylation Sites	8
Dissecting the Role of Promoters of Pathogen-sensitive Genes in Plant Defense	8
Molecular Docking and Interaction Studies of Identified Abscisic Acid Receptors in Oryza sativa: An In-Silico Perspective on Comprehending Stress Tolerance Mechanisms	8
Host Plant Strategies to Combat Against Viruses Effector Proteins	7
Raising Climate-Resilient Crops: Journey From the Conventional Breeding to New Breeding Approaches	7
Whole Genome Re-sequencing of Soybean Accession EC241780 Providing Genomic Landscape of Candidate Genes Involved in Rust Resistance	7
Phylogenomic Analysis of R2R3 MYB Transcription Factors in Sorghum and their Role in Conditioning Biofuel Syndrome	7
Genomic and Molecular Perspectives of Host-pathogen Interaction and Resistance Strategies against White Rust in Oilseed Mustard	7
Comparative Genomics and Evolution of Avian Specialized Traits	7
Modulation of Phototropin Signalosome with Artificial Illumination Holds Great Potential in the Development of Climate-Smart Crops	7
Extremophile Microbial Communities and Enzymes for Bioenergetic Application Based on Multi-Omics Tools	7
Big Data to Knowledge: Application of Machine Learning to Predictive Modeling of Therapeutic Response in Cancer	6
Genomic Research Favoring Higher Soybean Production	6
Identification of SNP Markers Associated with Iron and Zinc Concentrations in Cicer Seeds	6
Delineating Calcium Signaling Machinery in Plants: Tapping the Potential through Functional Genomics	6
Unlocking Allelic Diversity for Sustainable Development of Salinity Stress Tolerance in Rice	5
In Silico Prediction of Epitopes in Virulence Proteins of Mycobacterium ulcerans for Vaccine Designing	5
An Overview of Algorithms and Associated Applications for Single Cell RNA-Seq Data Imputation	5
Insights in Plant-Microbe Interaction through Genomics Approach (Part 1)	5
Emerging Molecular Strategies for Improving Rice Drought Tolerance	5
A Mini-review of the Computational Methods Used in Identifying RNA 5- Methylcytosine Sites	5
An Improved Computational Prediction Model for Lysine Succinylation Sites Mapping on Homo sapiens by Fusing Three Sequence Encoding Schemes with the Random Forest Classifier	4
Identification of Conserved Epitopes in SARS-CoV-2 Spike and Nucleocapsid Protein	4
Progress and Prospects of Developing Climate Resilient Wheat in South Asia Using Modern Pre-Breeding Methods	4
Transcriptomic and Epigenomic Assessment Reveals Epigenetic Regulation of WRKY Genes in Response to Magnaporthe oryzae Infection in Rice	4
A Comprehensive Investigation of Potential Novel Marine Psychrotolerant Actinomycetes sp. Isolated from the Bay-of-Bengal	4
The Covid-19, Epidemiology, Clinic and Prevention	4
Accumulating Impact of Smoking and Co-morbidities on Severity and Mortality of COVID-19 Infection: A Systematic Review and Meta-analysis	4
Etiopathogenesis of Psoriasis from Genetic Perspective: An updated Review	4
Characterization of the Chloroplast Genome Facilitated the Transformation of Parachlorella kessleri-I, A Potential Marine Alga for Biofuel Production	4
In Silico Transcriptomic Analysis of the Chloride Intracellular Channels (CLIC) Interactome Identifies a Molecular Panel of Seven Prognostic Markers in Patients with Pancreatic Ductal Adenocarcinoma	4
Could Small Neurotoxins-Peptides be Expressed during SARS-CoV-2 Infection?	4
Functional Characterization of Alr0765, A Hypothetical Protein from Anabaena PCC 7120 Involved in Cellular Energy Status Sensing, Iron Acquisition and Abiotic Stress Management in E. coli Using Molecu	4
Genetics and Genomics Interventions for Promoting Millets as Functional Foods	4
Advancement in Deep Learning Methods for Diagnosis and Prognosis of Cervical Cancer	3
The Complete Chloroplast Genome Sequence of Cicer bijugum, Genome Organization, and Comparison with Related Species	3
Applications and Challenges of Machine Learning Methods in Alzheimer's Disease Multi-Source Data Analysis	3
Systems Cytogenomics: Are We Ready Yet?	3

A Brief Survey for MicroRNA Precursor Identification Using Machine Learning Methods	3
Comparisons of Forecasting for Survival Outcome for Head and Neck Squamous Cell Carcinoma by using Machine Learning Models based on Multi-omics	3
HumDLoc: Human Protein Subcellular Localization Prediction Using Deep Neural Network	3
Splice Junction Identification using Long Short-Term Memory Neural Networks	3
MetaConClust - Unsupervised Binning of Metagenomics Data using Consensus Clustering	3
A Journey through Genetic Architecture and Predisposition of Coronary Artery Disease	3
Single-cell RNA Sequencing: In-depth Decoding of Heart Biology and Cardiovascular Diseases	3
Comparative Transcriptome Analysis of Flower Senescence of Camellia lutchuensis	3
Modeling Microbial Community Networks: Methods and Tools	2
Genome Sequence of a Highly Virulent pvl-positive Vancomycin intermediate- resistant Staphylococcus aureus Sequence Type 30	2
Nonsynonymous Synonymous Variants Demand for a Paradigm Shift in Genetics	2
Insights in Plant-Microbe Interaction through Genomics Approach (Part III)	2
An Update on Non-invasive Approaches for Genetic Testing of the Preimplantation Embryo	2
Bacterial Operational Taxonomic Units Replace the Interactive Roles of Other Operational Taxonomic Units Under Strong Environmental Changes	2
Chemogenomic Approaches for Revealing Drug Target Interactions in Drug Discovery	2
Novel Approaches to Profile Functional Long Noncoding RNAs Associated with Stem Cell Pluripotency	2
GAAP: A GUI-based Genome Assembly and Annotation Package	2
Study on Transcriptional Responses and Identification of Ribosomal Protein Genes for Potential Resistance against Brown Planthopper and Gall Midge Pests in Rice	2
Unveiling the Biodiversity of Hyperthermophilic Archaea in Jharia Coal Mines: Potential Threat to Methanogenesis?	2
Hypothetical Proteins as Predecessors of Long Non-coding RNAs	2
Insights in Plant-Microbe Interaction Through Genomics Approach (Part II)	2
Genomics of Extremophiles for Sustainable Agriculture and Biotechnological Applications (Part I)	2
Proteasome Activator Blm10 Regulates Transcription Especially During Aging	2
In-Silico and In-Vitro Analysis of Human SOS1 Protein Causing Noonan Syndrome - A Novel Approach to Explore the Molecular Pathways	2
Circular RNA Involvement in Aging and Longevity	2
Recursive Feature Elimination-based Biomarker Identification for Open Neural Tube Defects	2
Heuristic Analysis of Genomic Sequence Processing Models for High Efficiency Prediction: A Statistical Perspective	1
Improving the Genome Annotation of Rhizoctonia solani Using Proteogenomics	1
Prospective Analysis of Proteins Carried in Extracellular Vesicles with Clinical Outcome in Hepatocellular Carcinoma	1
The Long-Term Effect of Medically Enhancing Melanin Intrinsic Bioenergetics Capacity in Prematurity	1
Infestation of Rice by Gall Midge Influences Density and Diversity of Pseudomonas and Wolbachia in the Host Plant Microbiome	1
Exploring the Lethality of Human-Adapted Coronavirus Through Alignment-Free Machine Learning Approaches Using Genomic Sequences	1
Draft Genome Sequence of the Earthworm Eudrilus eugeniae	1
Updated Understanding of the Degenerative Disc Diseases - Causes Versus Effects - Treatments, Studies and Hypothesis	1
Genes, Genomes and Germplasm for Climate-Smart Agriculture- Part-I	1
Deciphering Target Protein Cascade in Salmonella typhi Biofilm using Genomic Data Mining, and Protein-protein Interaction	1
Genomics of Extremophiles for Sustainable Agriculture and Biotechnological Applications (Part II)	1
Construction of PARPi Resistance-related Competing Endogenous RNA Network	1
A Combinational Approach for More Efficient miRNA Biosensing	1
The Potential Role of Plastome Copy Number as a Quality Biomarker for Plant Products using Real-time Quantitative Polymerase Chain Reaction	1
Integrating LASSO Feature Selection and Soft Voting Classifier to Identify Origins of Replication Sites	1
A Bias in the Reading of the Genetic Code of Escherichia coli is a Characteristic for Genes that Specify Stress-induced MazF-mediated Proteins	1
MicroRNAs in Lung Cancer Oncogenesis and Tumor Suppression: How it Can Improve the Clinical Practice?	1
Identification of Potential Pleiotropic Genes for Immune and Skeletal Diseases Using Multivariate MetaCCA Analysis	1
Long Non-coding RNAs: Pivotal Epigenetic Regulators in Diabetic Retinopathy	1
Bacterial Protein Interaction Networks: Connectivity is Ruled by Gene Conservation, Essentiality and Function	1