OOIR: Observatory of International Research

Papers

(The median citation count of Journal of Industrial Microbiology & Biotechnology is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)

Article	Citations
Towards smart biomanufacturing: a perspective on recent developments in industrial measurement and monitoring technologies for bio-based production processes	82
Mechanisms of action of ribosomally synthesized and posttranslationally modified peptides (RiPPs)	69
Effective use of biosensors for high-throughput library screening for metabolite production	39
Discovery of novel secondary metabolites encoded in actinomycete genomes through coculture	37
Genome mining for drug discovery: progress at the front end	36
Research progress of the biosynthetic strains and pathways of bacterial cellulose	34
Cell-free systems for accelerating glycoprotein expression and biomanufacturing	33
Microbial adaptive evolution	28
Electroactive biofilms: how microbial electron transfer enables bioelectrochemical applications	28
Recent progress in adaptive laboratory evolution of industrial microorganisms	26
Metabolic engineering of microorganisms for L-alanine production	25
Potential applications of halophilic microorganisms for biological treatment of industrial process brines contaminated with aromatics	25
The infinite possibilities of RNA therapeutics	22
The future of self-selecting and stable fermentations	21
Microbial valorization of underutilized and nonconventional waste streams	21
Effects of a Δ-9-fatty acid desaturase and a cyclopropane-fatty acid synthase from the novel psychrophile Pseudomonas sp. B14-6 on bacterial membrane properties	21
Reverse β-oxidation pathways for efficient chemical production	21
Characterization of digestate microbial community structure following thermophilic anaerobic digestion with varying levels of green and food wastes	21
Assessing the risk of resistance to cationic biocides incorporating realism-based and biophysical approaches	21
WblA, a global regulator of antibiotic biosynthesis in Streptomyces	20
Nonribosomal peptide synthetases and their biotechnological potential in Penicillium rubens	20
Streptomyces venezuelae NRRL B-65442: genome sequence of a model strain used to study morphological differentiation in filamentous actinobacteria	20
Advances on (+)-nootkatone microbial biosynthesis and its related enzymes	20
Activation modes in biocatalytic radical cyclization reactions	19
Docking domain-mediated subunit interactions in natural product megasynth(et)ases	19

Improve the production of d-limonene by regulating the mevalonate pathway of Saccharomyces cerevisiae during alcoholic beverage fermentation	18
Genomic-, phenotypic-, and toxicity-based safety assessment and probiotic potency of Bacillus coagulans IDCC 1201 isolated from green malt	17
Genome mining for drug discovery: cyclic lipopeptides related to daptomycin	17
Biosynthesis and biological function of secondary metabolites of the rice blast fungus Pyricularia oryzae	17
Biosynthesis of sulfonamide and sulfamate antibiotics in actinomycete	16
You get what you screen for: on the value of fermentation characterization in high-throughput strain improvements in industrial settings	15
Clean manufacturing powered by biology: how Amyris has deployed technology and aims to do it better	15
Disruption of the Trichoderma reesei gul1 gene stimulates hyphal branching and reduces broth viscosity in cellulase production	15
Engineering acetyl-CoA supply andERG9repression to enhance mevalonate production inSaccharomyces cerevisiae	15
New insights and advances on pyomelanin production: from microbial synthesis to applications	15
Metabolic engineering of Escherichia coli W for isobutanol production on chemically defined medium and cheese whey as alternative raw material	14
Ultrahigh-throughput screening of industrial enzyme-producing strains by droplet-based microfluidic system	14
Cytochromes P450 involved in bacterial RiPP biosyntheses	13
Comparison of performances of different fungal laccases in delignification and detoxification of alkali-pretreated corncob for bioethanol production	13
Heterologous production of cyanobacterial compounds	13
Novel mannosylerythritol lipid biosurfactant structures from castor oil revealed by advanced structure analysis	12
Engineering robust microorganisms for organic acid production	12
Natural promoters and promoter engineering strategies for metabolic regulation inSaccharomyces cerevisiae	12
Monoterpenoid biosynthesis by engineered microbes	12
Production of d-Glyceric acid from d-Galacturonate in Escherichia coli	12
PenA, a penicillin-binding protein-type thioesterase specialized for small peptide cyclization	12
Small molecule natural products in human nasal/oral microbiota	12
Biosensor-enabled droplet microfluidic system for the rapid screening of 3-dehydroshikimic acid produced in Escherichia coli	12
Synthetic utility of oxygenases in site-selective terpenoid functionalization	11
Fatty acid secretion by the white-rot fungus,Trametes versicolor	11
A multistrategy approach for improving the expression of E. coli phytase in Pichia pastoris	11
Deciphering the mechanism by which the yeastPhaffia rhodozymaresponds adaptively to environmental, nutritional, and genetic cues	11
Reduced viscosity mutants of Trichoderma reesei with improved industrial fermentation characteristics	11
Fructooligosaccharides production by immobilized Pichia pastoris cells expressing Schedonorus arundinaceus sucrose:sucrose 1-fructosyltransferase	11
The effect of CO2 concentration on yeast fermentation: rates, metabolic products, and yeast stress indicators	10
Directed evolution of alditol oxidase for the production of optically pure D-glycerate from glycerol in the engineeredEscherichia coli	10
Engineering of a thermo-alkali-stable lipase from Rhizopus chinensis by rational design of a buried disulfide bond and combinatorial mutagenesis	10
Expanding the genetic engineering toolbox for the metabolically flexible acetogen Eubacterium limosum	10
Microbial engineering to produce fatty alcohols and alkanes	10
Insights into cyanobacterial alkane biosynthesis	10
Production of D-lactic acid containing polyhydroxyalkanoate polymers in yeast Saccharomyces cerevisiae	10
Artificial cell factory design for shikimate production in Escherichia coli	9
Enhanced production of clavulanic acid by improving glycerol utilization using reporter-guided mutagenesis of an industrial Streptomyces clavuligerus strain	9
Data-based dynamic compartment model: Modeling ofE. colifed-batch fermentation in a 600 m3 bubble column	8
Streptomyces clavuligerus: The Omics Era	8
Optimization of sporulation and purification methods for sporicidal efficacy assessment on Bacillus spores	8
Challenges in the production and use of probiotics as therapeuticals in cancer treatment or prevention	8
The aminoshikimic acid pathway in bacteria as source of precursors for the synthesis of antibacterial and antiviral compounds	8
Progress in heterologous biosynthesis of forskolin	8
Adaptive evolution of Methylotuvimicrobium alcaliphilum to grow in the presence of rhamnolipids improves fatty acid and rhamnolipid production from CH4	8
Rewiring the microbial metabolic network for efficient utilization of mixed carbon sources	8
Traminines A and B, produced by Fusarium concentricum, inhibit oxidative phosphorylation in Saccharomyces cerevisiae mitochondria	8
Impact of overexpressing NADH kinase on glucoamylase production in Aspergillus niger	8
Inorganic phosphate self-sufficient whole-cell biocatalysts containing two co-expressed phosphorylases facilitate cellobiose production	8
Anti-cryptococcal activity of preussolides A and B, phosphoethanolamine-substituted 24-membered macrolides, and leptosin C from coprophilous isolates of Preussia typharum	7

Antifungal activity and mechanism of action of natural product derivates as potential environmental disinfectants	7
Whole-cell display of Pyrococcus horikoshii glutamate decarboxylase in Escherichia coli for high-titer extracellular gamma-aminobutyric acid production	7
Directed evolution of Zymomonas mobilis sugar facilitator Glf to overcome glucose inhibition	7
Engineering Bacillus subtilis ATCC 6051a for the production of recombinant catalases	7
Structure and biosynthesis of deoxy-polyamine in Xenorhabdus bovienii	7
Discovery of ammosesters by mining the Streptomyces uncialis DCA2648 genome revealing new insight into ammosamide biosynthesis	7
Bioindustrial manufacturing readiness levels (BioMRLs) as a shared framework for measuring and communicating the maturity of bioproduct manufacturing processes	7
Analyzing CRISPR screens in non-conventional microbes	6
Enhancing the production of a heterologous Trametes laccase (LacA) by replacement of the major cellulase CBH1 in Trichoderma reesei	6
Time-course transcriptomics reveals that amino acids catabolism plays a key role in toxinogenesis and morphology in Clostridium tetani	6
Ethanol production by Escherichia coli from detoxified lignocellulosic teak wood hydrolysates with high concentration of phenolic compounds	6
Enhanced β-carotene production inYarrowia lipolyticathrough the metabolic and fermentation engineering	6
Microbial pigments: Learning from Himalayan perspective to industrial applications	6
CharacterizingEscherichia coli’s transcriptional response to different styrene exposure modes reveals novel toxicity and tolerance insights	6
Optimization of n-butanol synthesis in Lactobacillus brevis via the functional expression of thl, hbd, crt and ter	6
A muramidase from Acremonium alcalophilum hydrolyse peptidoglycan found in the gastrointestinal tract of broiler chickens	6
Exploitation of ammonia-inducible promoters for enzyme overexpression in Bacillus licheniformis	6
Transposon insertion mutation of Antarctic psychrotrophic fungus for red pigment production adaptive to normal temperature	5
Applying multiple approaches to deepen understanding of mixing and mass transfer in large-scale aerobic fermentations	5
Co‑cultivation of anaerobic fungi with Clostridium acetobutylicum bolsters butyrate and butanol production from cellulose and lignocellulose	5
Engineering Thermotoga maritima β-glucosidase for improved alkyl glycosides synthesis by site-directed mutagenesis	5
Effective approaches to discover new microbial metabolites in a large strain library	5
Submerged fermentation of Streptomyces uncialis providing a biotechnology platform for uncialamycin biosynthesis, engineering, and production	5
Characterization ofStreptomycessp. LS462 with high productivity of echinomycin, a potent antituberculosis and synergistic antifungal antibiotic	5
Organic farming practices utilizing spent microbial biomass from an industrial fermentation facility promote transition to copiotrophic soil communities	5
Faster, reduced cost calibration method development methods for the analysis of fermentation product using near-infrared spectroscopy (NIRS)	5
Small molecule inducers of actinobacteria natural product biosynthesis	5
Sugar transport for enhanced xylose utilization in Ashbya gossypii	5
Basic and applied research on multiple aminoglycoside antibiotic resistance of actinomycetes: an old-timer's recollection	5
Optimizing the strain engineering process for industrial-scale production of bio-based molecules	5
High-efficiency chromosomal integrative amplification strategy for overexpressing α-amylase in Bacillus licheniformis	4
Proteins identified through predictive metagenomics as potential biomarkers for the detection of microbiologically influenced corrosion	4
Enhanced esterase activity during the degradation of dibutyl phthalate by Fusarium species in liquid fermentation	4
Engineering sequence and selectivity of late-stage C-H oxidation in the MycG iterative cytochrome P450	4
Principles and practice of designing microbial biocatalysts for fuel and chemical production	4
Genetic evidence for the requirements of antroquinonol biosynthesis byAntrodia camphorataduring liquid-state fermentation	4
Survey of nonconventional yeasts for lipid and hydrocarbon biotechnology	4
Practical genetic control strategies for industrial bioprocesses	4
Perturbation of the peptidoglycan network and utilization of the signal recognition particle-dependent pathway enhances the extracellular production of a truncational mutant of CelA in Escherichia	4
Simultaneous identification to monitor consortia strain dynamics of four biofuel yeast species during fermentation	4