Journal of Applied Microbiology

Article	Citations
Identifying more targeted antimicrobials active against selected bacterial phytopathogens	203
Antibacterial and antibiofilm activities and synergism with florfenicol from the essential oils of Lippia sidoides and Cymbopogon citratus against Aeromonas hydrophila	124
Butyrate administration strengthens the intestinal epithelium and improves intestinal dysbiosis in a cholestasis fibrosis model	120
Effects of dietary tributyrin and physterol ester supplementation on growth performance, intestinal morphology, microbiota and metabolites in weaned piglets	112
Bacteriophages: A weapon against mixed-species biofilms in the food processing environment	89
Effect of nutritional and environmental conditions on biofilm formation of avian pathogenic Escherichia coli	84
Nutritional value of commercial broiler feed supplemented with olive mill waste fermented with probiotic Rhizopus oryzae strains	74
Lactobacillus plantarum as feed additive to improvement in vitro ruminal biofermentation and digestibility of some tropical tree leaves	71
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The effect of vine variety and vintage on wine yeast community structure of grapes and ferments	46
A proof‐of‐concept study of an automated solution for clinical metagenomic next‐generation sequencing	46
Antifungal action of the combination of ferulic acid and ultraviolet-A irradiation against Saccharomyces cerevisiae	44
Suitability of FTIR to distinguish pure cultures of problematic mould species from closely related species in the meat industry	43
Effects of probiotic Lactiplantibacillus plantarum IMC 510 supplementation on metabolic factors in otherwise healthy overweight and obese individuals	42
Mass spectrometry‐based untargeted lipidomics reveals new compositional insights into membrane dynamics of Candida albicans under magnesium deprivation	41
The white‐rot fungus, Phanerochaete chrysosporium , under combinatorial stress produces variable oil profiles following analysis of secondary metabolites	40
Harnessing rhizobacteria to fulfil inter-linked nutrient dependency on soil and alleviate stresses in plants	39
Genomic evidence for stability of the Bacillus Calmette-Guérin (BCG) vaccine strain (Pasteur 1173P2) from different batches in Iran	38
Bacterial levels and diversity in kitchen sponges and dishwashing brushes used by consumers	38
Biochemical features and early adhesion of marine Candida parapsilosis strains on high-density polyethylene	38

Properties of spores of Bacillus subtilis with or without a transposon that decreases spore germination and increases spore wet heat resistance	37
Theaflavin and its derivatives exert antibacterial action against Bacillus coagulans through adsorption to cell surface phospholipids	37
In vitro evaluation of anticancer effects of different probiotic strains on HCT‐116 cell line	37
Biodeterioration of carbographic ribbon: Isolation, identification of causal agents and forensic implications	36
No evidence for a relationship between farm or transformation process locations and antibiotic resistance patterns of Pseudomonas population associated with rainbow trout (Oncorhynchus mykiss)	36
Virulence, antimicrobial susceptibility and phylogenetic analysis of Cronobacter sakazakii isolates of food origins from Jordan	35
The efficacy of 8‐hydroxyquinoline derivatives in controlling the fungusIlyonectria liriodendri, the causative agent of black foot disease in grapevines	34
Selection of Debaryomyces hansenii isolates as starters in meat products based on phenotypic virulence factors, tolerance to abiotic stress conditions and aroma generation	33
Biosorption optimization of lead(II) and cadmium(II) ions by two novel nanosilica-immobilized fungal mutants	33
Epidemiology of major entero-pathogenic viruses and genetic characterization of Group A rotaviruses among children (≤5 years) with acute gastroenteritis in eastern India, 2018–2020	33
Thermal fogging with disinfectants and antifreezes enables effective industrial disinfection in subzero cold-chain environment	33
Occurrence, virulence, carbapenem resistance, susceptibility to disinfectants and public health hazard of Pseudomonas aeruginosa isolated from animals, humans and enviro	33
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Withdrawn: Abundance, community structure and diversity of nitrifying bacterial enrichments from low and high saline brackishwater environments	32
An Italian survey on the microbiological safety of toys containing aqueous media	31
The following articles for this issue Special issue were published in different issues	30
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Characterization of bacterial communities in Coregonus peled fillets during chilled storage and interactions between selected bacterial strains	30
Screening and evaluation of phosphate-solubilizing bacteria isolated from aquaculture ponds in a step-by-step strategy as potential biofertilizer	29
Dynamics of fungal and bacterial microbiome associated with green-mould contaminated sawdust substrate of Pleurotus pulmonarius (grey oyster mushroom)	28
Soy protein concentrate effects on gut microbiota structure and digestive physiology of Totoaba macdonaldi	28
Gut microbiota from Mexican patients with metabolic syndrome and HIV infection: An inflammatory profile	28
Environmental fate and behaviour of antibiotic resistance genes and small interference RNAs released from genetically modified crops	28
Microbial incubations of 8-phenyloctanoic acid and furan fatty acids in rumen fluid	27
Supplemental Leuconostoc mesenteroides strain NTM048 attenuates imiquimod‐induced psoriasis in mice	26
Gibberellic acid‐induced fatty acid metabolism and ABC transporters promote astaxanthin production in Phaffia rhodozyma	26
Effect of spatio-temporal variables, host fish species and on-farm biosecurity measures on the prevalence of potentially pathogenic Aeromonas species in freshwater fish farms	26
Residual antimicrobial coating efficacy against SARS-CoV-2	26
Prevalence and conservation of ebp genes in Enterococcus faecalis originated from animals	26
Lactobacillus fermentum(MTCC‐5898) alleviatesEscherichia coli‐induced inflammatory responses in intestinal epithelial cells by modulating immune genes and NF‐κB signalling	25
Animal feed contains diverse populations of Salmonella	25
Isolation and identification of Zalaria sp. Him3 as a novel fructooligosaccharides‐producing yeast	24
Utilization of palm oil mill effluent as a novel substrate for the production of antifungal compounds by Streptomyces philanthi RM-1-138 and evaluation of its efficacy in suppression of three strains	24
Action of Bacillus natto 16 on deoxynivalenol (DON) from wheat flour	24
Microbial and physicochemical assessment of irrigation water treatment methods	24
Recombinant turnip yellow mosaic virus coat protein as a potential nanocarrier	24
A traditional Ugandan Ficus natalensis bark cloth exhibits antimicrobial activity against methicillin-resistant Staphylococcus aureus	24
Salt-tolerant PGPR strain Priestia endophytica SK1 promotes fenugreek growth under salt stress by inducing nitrogen assimilation and secondary metabolites	24
A comparative study of in-vitro and in-silico anti-candidal activity and GC–MS profiles of snow mountain garlic vs. normal garlic	24
Functional fermented meat products with probiotics—A review	23
Influence of climatic factors on dry flower, grey and green mould diseases of macadamia flowers in Australia	22
Impact of parasitism on levels of human-pathogenic Vibrio species in eastern oysters	22
Improvement of endoglucanase production by Aspergillus brasiliensis in solid-state fermentation using cupuaçu (Theobroma grandiflorum) residue as substrate	22
Inhibition of corrosion causing Pseudomonas aeruginosa using plasma-activated water	22
Host range and virulence diversity of Pectobacterium carotovorum subsp. brasiliense strain RDKLR infecting radish in India, and development of a LAMP-based diagnostics	22
Exploring Bacillus thuringiensis as a model for endospore adhesion and its potential to investigate adhesins in Pasteuria penetrans	21
Bacillus altitudinis HNH7 and Bacillus velezensis HNH9 promote plant growth through upregulation of growth-promoting genes in upland cotton	21
Oxidative lesions and post-treatment viability attenuation of listeria monocytogenes triggered by atmospheric non-thermal plasma	21
The effect of a consortium of Penicillium sp. and Bacillus spp. in suppressing banana fungal diseases caused by Fusarium	21

Diversity ofVibrio parahaemolyticusin marine fishes of Bangladesh	21
Motility, biofilm formation and associated gene expression in Vibrio parahaemolyticus impaired by co‐culture with live Ulva fasciata	21
Simple and field amenable loop-mediated isothermal amplification-lateral flow dipstick assay for detection of west Nile virus in human clinical samples	21
Efficacy of an alcohol-based surface disinfectant formulation against human norovirus	20
Carbapenem resistance in Acinetobacter baumannii , and their importance in hospital‐acquired infections: a scientific review	20
Methicillin-resistant Staphylococcus aureus contamination of high-touched surfaces in a university campus	20
Transcriptome analysis of Micrococcus luteus in response to treatment with protocatechuic acid	20
Effects of short‐term soil tillage practice on activity and community structure of ammonia‐oxidizing bacteria and archaea under the double‐cropping rice field	19
Genomic characterization of high-risk Escherichia coli and Enterobacter hormaechei clones recovered from a single tertiary-care hospital in Pakistan	19
Impact of the factors shaping gut microbiota on obesity	19
Laccase production from Bacillus aestuarii KSK using Borassus flabellifer empty fruit bunch waste as a substrate and assessing their malachite green dye degradation	19
Multivariate analysis of adaptive response to ferulic acid and p ‐coumaric acid after physiological stresses in Cronobacter sakazakii	19
Involvement of CspC in response to diverse environmental stressors in Escherichia coli	19
Antifungal effect of volatile organic compounds produced byStreptomyces salmonisPSRDC‐09 against anthracnose pathogenColletotrichum gloeosporioidesPSU‐03 in postharvest chili fruit	18
The major component of cinnamon oil as a natural substitute against Fusarium solani on Astragalus membranaceus	18
In vitro model systems for exploring oral biofilms: From single‐species populations to complex multi‐species communities	18
Multifaceted intervention of Bacillus spp. against salinity stress and Fusarium wilt in tomato	18
Protective effects of Lacticaseibacillus rhamnosus Hao9 on dextran sulphate sodium-induced ulcerative colitis in mice	18
Quorum quenching and anti-biofilm activities of halotolerant Bacillus strains isolated in different environments in Algeria	18
Genotypic analyses and antimicrobial resistance profiles of Campylobacter jejuni from crows (Corvidae) of United States and India reflect their respective local antibiot	18
Quality of dialysis water and dialysate in haemodialysis centres: Highlight for occurrence of non-fermenting gram-negative bacilli	18
N ‐chlorotaurine, a potent weapon against multiresistant bacteria	18
Comparison of Monkeypox virus genomes from the 2017 Nigeria outbreak and the 2022 outbreak	18
A protein‐free chemically defined medium for the cultivation of various micro‐organisms with food safety significance	18
Breast milk flora plays an important role in infantile eczema: cohort study in Northeast China	18
The rhizosphere microbiome: Plant–microbial interactions for resource acquisition	17
Iron and methyl jasmonate increase high-value PUFA production by elevating the expression of desaturase genes in marine microalga Isochrysis sp.,	17
The use of functionalized nanoparticles to treat Staphylococcus aureus ‐based surgical‐site infections: a systematic review	17
Diagnosis of biofilm infections: current methods used, challenges and perspectives for the future	17
Bacillus subtilisimpact on plant growth, soil health and environment: Dr. Jekyll and Mr. Hyde	17
Elucidating the interaction of rhizosphere bacteria and environmental factors in influencing active ingredient content of Lycium barbarum fruit in China	17
Cultivable microalgae diversity from a freshwater aquaculture filtering system and its potential for polishing aquaculture‐derived water streams	17
Enhancement of Acinetobacter baumannii biofilm growth by cephem antibiotics via enrichment of protein and extracellular DNA in the biofilm matrices	17
Imaging and plate counting to quantify the effect of an antimicrobial: A case study of a photo-activated chlorine dioxide treatment	17
Redesigned pMAL expression vector for easy and fast purification of active native antimicrobial peptides	17
Metagenomic analysis reveals the linkages between bacteria and the functional enzymes responsible for potential ammonia and biogenic amine production in alfalfa silage	17
Distribution of virulence factors and its relatedness towards the antimicrobial response of enterotoxigenic Escherichia coli strains isolated from patients in Kolkata, I	16
Effects of Ganfule capsule on microbial and metabolic profiles in anti-hepatocellular carcinoma	16
The role of S-layer protein (SlpA) in biofilm-formation of Deinococcus radiodurans	16
Inhibitory effects of atmospheric dielectric barrier discharge plasma against Bacillus cereus and Staphylococcus aureus on Gwamegi (semi-dried Cololabis saira)	16
“Ethno-microbiology” of ethnic Indian fermented foods and alcoholic beverages	16
Lactobacillus , Bifidobacterium and Lactococcus response to environmental stress: Mechanisms and application of cross‐p	16
A multi-functional anti-aging moisturizer maintains a diverse and balanced facial skin microbiome	16
Could Bacillus biofilms enhance the effectivity of biocontrol strategies in the phyllosphere?	16
Probiotic and paraprobiotic derivates exhibit anti-inflammatory and genoprotective effects during induced stress	16
Functional analysis of the transcriptional activator XlnR of Penicillium oxalicum	16
Grapevine rootstocks drive the community structure of arbuscular mycorrhizal fungi in New Zealand vineyards	16
High abundance of human herpesvirus 8 in wastewater from a large urban area	16
Characterization of three novel DyP-type peroxidases from Streptomyces chartreusis NRRL 3882	15
Gene repression using synthetic small regulatory RNA in Methylorubrum extorquens	15
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The probiotic potential of Lactobacillus plantarum strain RW1 isolated from canine faeces	15
Ceriporia lacerata HG2011 enhances P mobilization and wheat agronomic performance irrespective of P fertilization levels	15
Genomic analysis revealed conserved acid tolerance mechanisms from native micro‐organisms in fermented feed	15
Mycobiota dynamics and mycotoxin detection in PGI Salame Piemonte	15
Levilactobacillus brevis from carnivores can ameliorate hypercholesterolemia: In vitro and in vivo mechanistic evidence	15
Integrative analyses of probiotics, pathogenic infections and host immune response highlight the importance of gut microbiota in understanding disease recovery in rainbow trout (Oncorhynchus mykiss)	15
Antistaphylococcal and antioxidant activities of bacteriocinogenic lactic acid bacteria and essential oil in goat coalho cheese	15
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Characterization, genome analysis and in vitro activity of a novel phage vB_EcoA_RDN8.1 active against multi-drug resistant and extensively drug-resistant biofilm-forming uropathogenic Escherichia col	15
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Bioprospecting thermotolerant yeasts from distillery effluent and molasses for high‐temperature ethanol production	14
Phospholipase C (AoPLC2) regulates mycelial development, trap morphogenesis, and pathogenicity of the nematode-trapping fungus Arthrobotrys oligospora	14
Genomic insights into persistence of Listeria species in the food processing environment	14
Lactobacillus derived from breast milk facilitates intestinal development in IUGR rats	14
Multilocus sequence analysis and identification of mating-type idiomorphs distribution in Magnaporthe oryzae population of Karnataka state of India	14
High-throughput RNA sequencing and genetic structure studies of turnip mosaic virus infecting black and yellow mustard revealing emergence of world-B3 pathotype in India	14
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Role of HrcA in stress management in Mycobacterium tuberculosis	14
Anin vitroandex vivowound infection model to test topical and systemic treatment with antibiotics	14
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Using fermentation waste of ethanol-producing yeast for bacterial riboflavin production and recycling of spent bacterial mass for enhancing the growth of oily plants	14
Growth interferences between bacterial strains from raw cow's milk and their impact on growth of Listeria monocytogenes and Staphylococcus aureus	14
Antifungal activity and mechanism of action of dichloromethane extract fraction A from Streptomyces libani against Aspergillus fumigatus	14
Algicidal interaction between Paenibacillus polymyxa MEZ6 and microalgae	14
Bactericidal effects of high-energy visible light on common otitis media pathogens	13
In vitro activities of N-acetyl cysteine and levofloxacin as a catheter lock therapy against catheter-associated infections	13
The sustainable mitigation of in vitro ruminal biogas emissions by ensiling date palm leaves and rice straw with lactic acid bacteria and Pleurotus ostreatus for cleaner livestock production	13
Nutritional conditions of the novel freshwater Coccomyxa AP01 for versatile fatty acids composition	13
Enhancing the biodesulphurization capacity of Rhodococcus sp. FUM94 in a biphasic system through optimization of operational factors	13

The capability of Bacillus pseudomycoides from soil to remove Cu(II) in water and prevent it from entering plants	13
Campylobacter Express Resistance Array for detecting the presence of fluoroquinolone- and macrolide-resistant Campylobacter jejuni and Campylobacter coli in broiler farms	13
Characteristics of the gut microbiota in Bifidobacterium catenulatum LI10 pretreated rats with lower levels of D-galactosamine-induced liver damage	13
Fermentation of chickpea flour with selected lactic acid bacteria for improving its nutritional and functional properties	13
Airborne dermatophyte propagules concentration in cowsheds as an underestimated reservoir of potential zoonoses	13
Development of a multifunctional and self-preserving cosmetic formulation using sophorolipids and palmarosa essential oil against acne-causing bacteria	13
Novel insights into pivotal risk factors for rectal carriage of extended-spectrum-β-lactamase-producing enterobacterales within the general population in Lower Saxony, Germany	13
PCR-based ORF typing of Klebsiella pneumoniae for rapid identification of global clones and transmission events	13
Salmonella contamination and hazard analysis in a storage facility for feed materials in Japan	13
Antifungal activity of 2-chloro-N-phenylacetamide, docking and molecular dynamics studies against clinical isolates of Candida tropicalis and Candida parapsilosis	13
Microbiome composition of the marine sponge Cliona varians at the neotropical southern Caribbean Sea displays a predominant core of Rhizobiales and Nitrosopumilaceae	13
Comparison of the culture method with multiplex PCR for the confirmation of Legionella spp. and Legionella pneumophila	13
Novel pulsed infrared radiation: Effect on microbial, chemical and sensory properties of saffron (Crocus sativus L.)	13
Biovalorization of spent Konacha tea leaves via single-culture fermentation involving wine yeasts and lactic acid bacteria	13
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Citrus flavonoids against Fusarium verticillioides in post-harvest maize: Minimization of fumonisins and alteration of fungal ultrastructure	12
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Antibacterial and antibiofilm activities of novel antimicrobial peptide DP7 against the periodontal pathogen Porphyromonas gingivalis	12
The influence of probiotics on gastrointestinal tract infections among children attending childcare: A systematic review and meta-analysis	12
Characterization of R‐pyocin activity against Gram‐positive pathogens for the first time with special focus on Staphylococcus aureus	12
Development of Hinoline® as a natural preservative for cosmetic product using bioinspiration and Greenpharma Database	12
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Characterization of nitrilases from Variovorax boronicumulans that functions in insecticide flonicamid degradation and β-cyano-L-alanine detoxification	12
Evaluation of the Roche MagNA Pure 96 nucleic acid extraction platform for the Seegene Anyplex II HPV28 detection assay	12
Genomic analysis and proteomic response of the chromium‐resistant and phenanthrene‐degrading strain Streptomyces sp. MC1	12
Indole decreases the virulence of pathogenic vibrios belonging to the Harveyi clade	12
In vitro antiviral activity of Thymbra spicata L. extract on bovine respiratory viruses (BCoV, BPIV-3, BRSV, BVDV and BoHV-1)	12
Transcriptional responses of Aurantiochytrium limacinum under light conditions	12
Correlation between exopolysaccharide biosynthesis and gastrointestinal tolerance of Lactiplantibacillus plantarum	12
Association of human leukocyte antigen DQ-rs3920AG genotype with Helicobacter pylori recurrence in Kafrelsheikh, Egypt	12
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Natural inactivation of MS2, poliovirus type 1 and Cryptosporidium parvum in an anaerobic and reduced aquifer	12
Immunomodulatory and ameliorative effects of probiotic in combination with diclazuril on broilers under coccidia infection	12
Propolis extract and oregano essential oil as biofungicides for garlic seed cloves: in vitro assays and synergistic interaction against Penicillium allii<	12
Beneficial effects of fermented barley extracts on inflammatory status and gut microbiota in high-fat diet-induced obese rats	12
The potential of Bacillus subtilis and phosphorus in improving the growth of wheat under chromium stress	12
Esculin hydrolysis negative and TcdA-only producing strains of Clostridium (Clostridioides) difficile from the environment in Western Australia	12
A carvacrol-based product reduces Campylobacter jejuni load and alters microbiota composition in the caeca of chickens	11
Structure and functional capacity of a benzene-mineralizing, nitrate-reducing microbial community	11
Impact of microecological agents on water environment restoration and microbial community structures of trench system in a Baiyangdian wetland ecosystem	11
Isolation and characterization of competitive exclusion microorganisms from animal wastes–based composts against Listeria monocytogenes	11
Trifolium repens and T. subterraneum modify their nodule microbiome in response to soil pH	11
Improvement in desulfurization of dibenzothiophene and dibenzothiophene sulfone by Paenibacillus strains using immobilization or nanoparticle coating	11
A SARS-CoV-2 oral vaccine development strategy based on the attenuated Salmonella type III secretion system	11
Visual typing detection of brucellosis with a lateral flow immunoassay based on coloured latex microspheres	11
A current review of pathogenicity determinants of Streptococcus sp.	11
Norovirus attribution study: Detection of norovirus from the commercial food preparation environment in outbreak and non-outbreak premises	11
Meta-analysis of the antifungal activities of three essential oils as alternative therapies in dermatophytosis infections	11
Metabolite profiling reveals overexpression of the global regulator, MoLAEA leads to increased synthesis of metabolites in Magnaporthe oryzae	11
Metabolomic analysis of sheath blight disease of rice (Oryza sativa L.) induced by Rhizoctonia solani phytotoxin	11
Peracetic acid‐based disinfectant is the most appropriate solution for a biological decontamination procedure of responders and healthcare workers in the field environment	11
Potential probiotics Lactobacillus casei K11 combined with plant extracts reduce markers of type 2 diabetes mellitus in mice	11
Narrow pH tolerance found for a microbial fuel cell treating winery wastewater	11
Isolation and agricultural potential of penicillic acid against citrus canker	11
Functional bacterial cultures for dairy applications: Towards improving safety, quality, nutritional and health benefit aspects	11
Broad‐spectrum antifungal activity of lipopeptide brevilaterin B and its inhibition effects against Fusarium oxysporum and Penicillium chrysogenum	11
Pseudomonas fluorescens NK4 siderophore promotes plant growth and biocontrol in cucumber	11
Effects of mixed culture fermentation of Bacillus amyloliquefaciens and Trichoderma longibrachiatum on its constituent strains and the bio	11
Two putative probiotic strains improve diet‐induced hypercholesterolemia through modulating intestinal cholesterol uptake and hepatic cholesterol efflux	11
Bacteriocin production by Leuconostoc citreum ST110LD isolated from organic farm soil, a promising biopreservative	11
High-throughput assay for effect screening of amphotericin B and bioactive components on filamentous Candida albicans	11
High-titre production of aromatic amines in metabolically engineered Escherichia coli	11
Harnessing taxonomically diverse and metabolically versatile genus Paracoccus for bioplastic synthesis and xenobiotic biodegradation	11
Effect of thermotherapy, Leifsonia xyli subsp. xyli titres, sugarcane genotype and diagnostic techniques on ratoon stunt control in Brazil	11
Development of a novel feeding method for Japanese black calves with thermophile probiotics at postweaning	11