OOIR: Observatory of International Research

Papers

(The TQCC of Genes to Cells is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-02-01 to 2025-02-01.)

Article	Citations
ZomB is essential for chemotaxis of Vibrio alginolyticus by the rotational direction control of the polar flagellar motor	29
Issue Information	26
GTP‐dependent regulation of heterochromatin fluctuations at subtelomeric regions in Saccharomyces cerevisiae	20
A Transition From Interindividual Uniformity to Diversity in Appearance and Transcriptional Features at Midlife in Caenorhabditis elegans	18
SRPKs Homolog Dsk1 Regulates Homologous Recombination Repair in Schizosaccharomyces pombe	16
Sulforaphane Induces Transient Reactive Oxygen Species‐Mediated DNA Damage in HeLa Cells	15
HIF1α Plays a Crucial Role in the Development of TFE3–Rearranged Renal Cell Carcinoma by Orchestrating a Metabolic Shift Toward Fatty Acid Synthesis	13
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Lineage tracing using Wnt2b‐2A‐CreERT2 knock‐in mice reveals the contributions of Wnt2b‐expressing cells to novel subpopulations of mesothelial/epicardial cell lineages during mouse deve	12
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Meiotic DNA double‐strand break‐independent role of protein phosphatase 4 in Hop1 assembly to promote meiotic chromosome axis formation in budding yeast	12
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Pbp1 mediates the aberrant expression of genes involved in growth defect of ccr4∆ and pop2∆ mutants in yeast Saccharomyces cerevisiae	11
A simple, rapid, and efficient method for generating multigene‐knockout culture cells by the CRISPR/Cas9 system	10
Generating a new mouse model for nuclear PTEN deficiency by a single K13R mutation	10
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Meeting report: AT workshop 2023—A platform for discussing cutting‐edge science in DNA damage signaling, repair, and human disorders	10
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Expression of lipid transport‐associated genes in lipid‐deprived cancer cells	10
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Interleukin‐3‐dependent potentiation of IgE responsiveness in mouse basophils	9
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Pkd2, mutations linking to autosomal dominant polycystic kidney disease, localizes to the endoplasmic reticulum and regulates calcium signaling in fission yeast	9
CdsA, a CDP‐diacylglycerol synthase involved in phospholipid and glycolipid MPIase biosynthesis, possesses multiple initiation codons	9

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Histone H3.3 chaperone HIRA renders stress‐responsive genes poised for prospective lethal stresses in acquired tolerance	8
The CRK14 gene encoding a cysteine‐rich receptor‐like kinase is implicated in the regulation of global proliferative arrest in Arabidopsis thaliana	8
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Issue Information	8
“The 10th International MDM2 Workshop”: Opening up new avenues for MDM2 and p53 research, the First International MDM2 Workshop in Asia	7
The 33rd International Conference on Arabidopsis Research (ICAR2023)	7
Dynamics of actomyosin filaments in the contractile ring revealed by ultrastructural analysis	7
Egg components reverse the atrophy induced by injury in skeletal muscles	7
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Dorsal–lateral clock neurons modulate consolidation and maintenance of long‐term memory in Drosophila	7
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DNMT1 can induce primary germ layer differentiation through de novo DNA methylation	6
Trimethylguanosine synthase 1 (Tgs1) is involved in Swi6/HP1‐independent siRNA production and establishment of heterochromatin in fission yeast	6
Mutations equivalent to Drosophila mago nashi mutants imply reduction of Magoh protein incorporation into exon junction complex	6
INT6/eIF3e represses E‐cadherin expression through HIF2α in lung carcinoma A549 cells	6
Metastatic potentials classified with hypoxia‐inducible factor 1 downstream genes in pan‐cancer cell lines	6
Cdc7 kinase is required for postnatal brain development	6
GM‐CSF‐producing CCR2⁺CCR6⁺ Th17 cells are pathogenic in dextran sodium sulfate‐induced colitis model in mice	6
Antibiotic effects on gut microbiota modulate diet‐induced metabolic dysfunction‐associated steatohepatitis development in C57BL/6 mice	5
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Machine learning extracts oncogenic‐specific γ‐H2AX foci formation pattern upon genotoxic stress	5
Chromatin remodeling in replication‐uncoupled maintenance DNA methylation and chromosome stability: Insights from ICF syndrome studies	5
Growth and division mode plasticity is dependent on cell density in marine‐derived black yeasts	5
Clover: An unbiased method for prioritizing differentially expressed genes using a data‐driven approach	5
Evolution of the Cdk4/6–Cdkn2 system in invertebrates	5
Neonatal Fc receptor is a functional receptor for classical human astrovirus	5
Dose‐dependent effects of histone methyltransferase NSD2 on site‐specific double‐strand break repair	5
A novel transcription factor Sdr1 involving sulfur depletion response in fission yeast	5
Long‐term sorbitol consumption affects the hippocampus and alters cognitive function in aged mice	5
Biochemical propensity mapping for structural and functional anatomy of importin α IBB domain	5
The structure–function analysis of Obg‐like GTPase proteins along the evolutionary tree from bacteria to humans	5
Luciferase‐based quantification of membrane fusion induced by SARS‐CoV‐2 S protein	5
The toxicity of dysregulated Plk1 activity revealed by its suppressor mutations	4
Cryo‐EM structure and biochemical analyses of the nucleosome containing the cancer‐associated histone H3 mutation E97K	4
N‐(3,4‐dimethoxyphenethyl)‐6‐methyl‐2,3,4,9‐tetrahydro‐1H‐carbazol‐1‐amine inhibits bladder cancer progression by suppressing YAP1/TAZ	4
Corrigendum	4
Identification and characterization of an enhancer element regulating expression of Cdkn1c (p57 gene)	4
Mitochondrial dynamics and degradation in the oleaginous yeast Lipomyces starkeyi	4
Mulberry fruit extract alleviates the intracellular amyloid‐β oligomer‐induced cognitive disturbance and oxidative stress in Alzheimer’s disease model mice	4
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Cellular and molecular mechanisms of asymmetric stem cell division in tissue homeostasis	4
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Glioma cells remotely promote erythropoiesis as a self‐expanding strategy of cancer stem cells	4
Chimera RNA transcribed from integrated HPV18 genome with adjacent host genomic region promotes oncogenic gene expression through condensate formation	4
Quick validation of genetic quality for conditional alleles in mice	4
Mapping of the regions implicated in nuclear localization of multi‐functional DNA repair endonuclease XPF‐ERCC1	4

Chromosomal rearrangements associated with SMC5/6 deficiency in DNA replication	4
The structure of POMGNT2 provides new insights into the mechanism to determine the functional O‐mannosylation site on α‐dystroglycan	3
Transcriptional regulation of adipogenin expression in liver steatosis by hepatic peroxisome proliferator‐activated receptor gamma	3
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Wnt 2022 EMBO \| the Company of Biologists workshop and Yamada conference	3
Stimulatory role of nectin‐4 and p95‐ErbB2 in multilayered T47D cell proliferation	3
Differential dependence on microbiota of IL‐23/IL‐22‐dependent gene expression between the small‐ and large‐intestinal epithelia	3
Amphibian thrombocyte‐derived extracellular vesicles, including microRNAs, induce angiogenesis‐related genes in endothelial cells	3
Single‐cell dissection reveals the role of DNA damage response patterns in tumor microenvironment components contributing to colorectal cancer progression and immunotherapy	3
Vrk2 deficiency elicits aggressive behavior in female zebrafish	3
Autonomous and intercellular chemokine signaling elicited from mesenchymal stem cells regulates migration of undifferentiated gastric cancer cells	3
Issue Information	3
ACAGT‐007a, an anti‐cancer compound that modulates ERK MAPK signaling, induces nuclear enrichment of phosphorylated ERK in T3M4 pancreatic cancer cells	3
Unbiased prediction of off‐target sites in genome‐edited rice using SITE‐Seq analysis on a web‐based platform	3
Daidara: A gigantic Gypsy LTR retrotransposon lineage in the springtail Allacma fusca genome	3
Identification of CD56^dim subpopulation marked with high expression of GZMB/PRF1/PI‐9 in CD56⁺ interferon‐α‐induced dendritic cells	3
The iron chelator deferriferrichrysin induces paraptosis via extracellular signal‐related kinase activation in cancer cells	3
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Issue Information	3
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Potential of HMGB‐inhibitory oligodeoxynucleotide ISM ODN to neutrophil recruitment in mouse model of hepatitis	3
Physiological concentrations of glucocorticoids induce pathological DNA double‐strand breaks	3
Regulation mechanisms of CARMA1–Bcl10–MALT1 complex assembly inferred from the analysis of TRAF6‐deficient cells	3
The ribonuclease domain function is dispensable for SLFN11 to mediate cell fate decision during replication stress response	2
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Inhibition of lipopolysaccharide‐induced inflammatory responses by 1′‐acetoxychavicol acetate	2
Intranasal Sendai virus‐based SARS‐CoV‐2 vaccine using a mouse model	2
Issue Information	2
VCP relocalization limits mitochondrial activity, GSH depletion and ferroptosis during starvation in PC3 prostate cancer cells	2
MiR‐382‐5p suppresses M1 macrophage polarization and inflammatory response in response to bronchopulmonary dysplasia through targeting CDK8: Involving inhibition of STAT1 pathway	2
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Rapamycin Abrogates Aggregation of Human α‐Synuclein Expressed in Fission Yeast via an Autophagy‐Independent Mechanism	2
RNA–DNA hybrids on protein coding genes are stabilized by loss of RNase H and are associated with DNA damages during S‐phase in fission yeast	2
Identification ofksg1mutation showing long‐lived phenotype in fission yeast	2
Polyvinyl alcohol scaffolds and supplementation support 3D and sphere culturing of human cancer cell lines by reducing apoptosis and promoting cellular proliferation	2
Potential negative effect of total parenteral nutrition on the human circadian clock	2
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EGL‐4/PKG regulates the role of an interneuron in a chemotaxis circuit of C. elegans through mediating integration of sensory signals	2
Meflin defines mesenchymal stem cells and/or their early progenitors with multilineage differentiation capacity	2
Fatty acid preference for beta‐oxidation in mitochondria of murine cultured astrocytes	2
Ubiquitination‐dependent and ‐independent repression of target genes by SETDB1 reveal a context‐dependent role for its methyltransferase activity during adipogenesis	2
DHX36 maintains genomic integrity by unwinding G‐quadruplexes	2