OOIR: Observatory of International Research

Papers

(The TQCC of Genes to Cells is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-04-01 to 2025-04-01.)

Article	Citations
ZomB is essential for chemotaxis of Vibrio alginolyticus by the rotational direction control of the polar flagellar motor	39
GTP‐dependent regulation of heterochromatin fluctuations at subtelomeric regions in Saccharomyces cerevisiae	23
Issue Information	23
Lineage tracing using Wnt2b‐2A‐CreERT2 knock‐in mice reveals the contributions of Wnt2b‐expressing cells to novel subpopulations of mesothelial/epicardial cell lineages during mouse deve	20
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GM‐CSF‐producing CCR2⁺CCR6⁺ Th17 cells are pathogenic in dextran sodium sulfate‐induced colitis model in mice	15
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Meiotic DNA double‐strand break‐independent role of protein phosphatase 4 in Hop1 assembly to promote meiotic chromosome axis formation in budding yeast	13
Issue Information	13
Pbp1 mediates the aberrant expression of genes involved in growth defect of ccr4∆ and pop2∆ mutants in yeast Saccharomyces cerevisiae	12
Issue Information	12
A simple, rapid, and efficient method for generating multigene‐knockout culture cells by the CRISPR/Cas9 system	12
Meeting report: AT workshop 2023—A platform for discussing cutting‐edge science in DNA damage signaling, repair, and human disorders	10
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Generating a new mouse model for nuclear PTEN deficiency by a single K13R mutation	10
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Pkd2, mutations linking to autosomal dominant polycystic kidney disease, localizes to the endoplasmic reticulum and regulates calcium signaling in fission yeast	9
CdsA, a CDP‐diacylglycerol synthase involved in phospholipid and glycolipid MPIase biosynthesis, possesses multiple initiation codons	9
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Interleukin‐3‐dependent potentiation of IgE responsiveness in mouse basophils	9
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The CRK14 gene encoding a cysteine‐rich receptor‐like kinase is implicated in the regulation of global proliferative arrest in Arabidopsis thaliana	8
Histone H3.3 chaperone HIRA renders stress‐responsive genes poised for prospective lethal stresses in acquired tolerance	8
Issue Information	8

Dorsal–lateral clock neurons modulate consolidation and maintenance of long‐term memory in Drosophila	7
Issue Information	7
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“The 10th International MDM2 Workshop”: Opening up new avenues for MDM2 and p53 research, the First International MDM2 Workshop in Asia	7
Egg components reverse the atrophy induced by injury in skeletal muscles	7
Dynamics of actomyosin filaments in the contractile ring revealed by ultrastructural analysis	7
The 33rd International Conference on Arabidopsis Research (ICAR2023)	6
INT6/eIF3e represses E‐cadherin expression through HIF2α in lung carcinoma A549 cells	6
DNMT1 can induce primary germ layer differentiation through de novo DNA methylation	6
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Cdc7 kinase is required for postnatal brain development	6
Mutations equivalent to Drosophila mago nashi mutants imply reduction of Magoh protein incorporation into exon junction complex	6
Metastatic potentials classified with hypoxia‐inducible factor 1 downstream genes in pan‐cancer cell lines	5
HIF1α Plays a Crucial Role in the Development of TFE3–Rearranged Renal Cell Carcinoma by Orchestrating a Metabolic Shift Toward Fatty Acid Synthesis	5
The structure–function analysis of Obg‐like GTPase proteins along the evolutionary tree from bacteria to humans	5
Long‐term sorbitol consumption affects the hippocampus and alters cognitive function in aged mice	5
SRPKs Homolog Dsk1 Regulates Homologous Recombination Repair in Schizosaccharomyces pombe	5
A Transition From Interindividual Uniformity to Diversity in Appearance and Transcriptional Features at Midlife in Caenorhabditis elegans	5
Biochemical propensity mapping for structural and functional anatomy of importin α IBB domain	5
Dose‐dependent effects of histone methyltransferase NSD2 on site‐specific double‐strand break repair	5
Sulforaphane Induces Transient Reactive Oxygen Species‐Mediated DNA Damage in HeLa Cells	5
A novel transcription factor Sdr1 involving sulfur depletion response in fission yeast	5
Clover: An unbiased method for prioritizing differentially expressed genes using a data‐driven approach	5
Antibiotic effects on gut microbiota modulate diet‐induced metabolic dysfunction‐associated steatohepatitis development in C57BL/6 mice	5
Correction to “The Protein Kinase aPKC as Well as the Small GTPases RhoA and Cdc42 Regulates Neutrophil Chemotaxis Partly by Recruiting the ROCK Kinase to the Leading	4
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Luciferase‐based quantification of membrane fusion induced by SARS‐CoV‐2 S protein	4
Corrigendum	4
Chromosomal rearrangements associated with SMC5/6 deficiency in DNA replication	4
Neonatal Fc receptor is a functional receptor for classical human astrovirus	4
Evolution of the Cdk4/6–Cdkn2 system in invertebrates	4
Growth and division mode plasticity is dependent on cell density in marine‐derived black yeasts	4
Cellular and molecular mechanisms of asymmetric stem cell division in tissue homeostasis	4
Vacuolar Sts1 Degradation‐Induced Cytoplasmic Proteasome Translocation Restores Cell Proliferation	4
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Mapping of the regions implicated in nuclear localization of multi‐functional DNA repair endonuclease XPF‐ERCC1	4
Machine learning extracts oncogenic‐specific γ‐H2AX foci formation pattern upon genotoxic stress	4
Chromatin remodeling in replication‐uncoupled maintenance DNA methylation and chromosome stability: Insights from ICF syndrome studies	4
Identification and characterization of an enhancer element regulating expression of Cdkn1c (p57 gene)	4
Mulberry fruit extract alleviates the intracellular amyloid‐β oligomer‐induced cognitive disturbance and oxidative stress in Alzheimer’s disease model mice	3
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Cryo‐EM structure and biochemical analyses of the nucleosome containing the cancer‐associated histone H3 mutation E97K	3
Regulation mechanisms of CARMA1–Bcl10–MALT1 complex assembly inferred from the analysis of TRAF6‐deficient cells	3
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Issue Information	3
Amphibian thrombocyte‐derived extracellular vesicles, including microRNAs, induce angiogenesis‐related genes in endothelial cells	3
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Mitochondrial dynamics and degradation in the oleaginous yeast Lipomyces starkeyi	3
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Differential dependence on microbiota of IL‐23/IL‐22‐dependent gene expression between the small‐ and large‐intestinal epithelia	3
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Vrk2 deficiency elicits aggressive behavior in female zebrafish	3
The iron chelator deferriferrichrysin induces paraptosis via extracellular signal‐related kinase activation in cancer cells	3
Transcriptional regulation of adipogenin expression in liver steatosis by hepatic peroxisome proliferator‐activated receptor gamma	3
Chimera RNA transcribed from integrated HPV18 genome with adjacent host genomic region promotes oncogenic gene expression through condensate formation	3
Single‐cell dissection reveals the role of DNA damage response patterns in tumor microenvironment components contributing to colorectal cancer progression and immunotherapy	3
The toxicity of dysregulated Plk1 activity revealed by its suppressor mutations	3
N‐(3,4‐dimethoxyphenethyl)‐6‐methyl‐2,3,4,9‐tetrahydro‐1H‐carbazol‐1‐amine inhibits bladder cancer progression by suppressing YAP1/TAZ	3
Daidara: A gigantic Gypsy LTR retrotransposon lineage in the springtail Allacma fusca genome	3
MiR‐382‐5p suppresses M1 macrophage polarization and inflammatory response in response to bronchopulmonary dysplasia through targeting CDK8: Involving inhibition of STAT1 pathway	3
The structure of POMGNT2 provides new insights into the mechanism to determine the functional O‐mannosylation site on α‐dystroglycan	3
Glioma cells remotely promote erythropoiesis as a self‐expanding strategy of cancer stem cells	3
Inhibition of lipopolysaccharide‐induced inflammatory responses by 1′‐acetoxychavicol acetate	2
Issue Information	2
Differential effects of the formin inhibitor SMIFH2 on contractility and Ca²⁺ handling in frog and mouse cardiomyocytes	2
Issue Information	2
Unbiased prediction of off‐target sites in genome‐edited rice using SITE‐Seq analysis on a web‐based platform	2
The ribonuclease domain function is dispensable for SLFN11 to mediate cell fate decision during replication stress response	2
Ubiquitination‐dependent and ‐independent repression of target genes by SETDB1 reveal a context‐dependent role for its methyltransferase activity during adipogenesis	2
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Potential negative effect of total parenteral nutrition on the human circadian clock	2
The fly brain lands in Tokyo: A report on the 3rd Asia Pacific Drosophila Neurobiology Conference	2
Correction to ‘The role of transcriptional coactivator TRAP220 in myelomonocytic differentiation’	2
Stimulatory role of nectin‐4 and p95‐ErbB2 in multilayered T47D cell proliferation	2
Potential of HMGB‐inhibitory oligodeoxynucleotide ISM ODN to neutrophil recruitment in mouse model of hepatitis	2
Wnt 2022 EMBO \| the Company of Biologists workshop and Yamada conference	2
Intranasal Sendai virus‐based SARS‐CoV‐2 vaccine using a mouse model	2
Meflin defines mesenchymal stem cells and/or their early progenitors with multilineage differentiation capacity	2
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Immunotherapy‐induced reprogramming of cancer‐associated fibroblasts can promote tumor progression	2
Autonomous and intercellular chemokine signaling elicited from mesenchymal stem cells regulates migration of undifferentiated gastric cancer cells	2
ACAGT‐007a, an anti‐cancer compound that modulates ERK MAPK signaling, induces nuclear enrichment of phosphorylated ERK in T3M4 pancreatic cancer cells	2
Issue Information	2
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EGL‐4/PKG regulates the role of an interneuron in a chemotaxis circuit of C. elegans through mediating integration of sensory signals	2
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