Genes to Cells

Article	Citations
miR‐29c‐3p inhibits microglial NLRP3 inflammasome activation by targeting NFAT5 in Parkinson's disease	40
m6A demethylase ALKBH5 promotes proliferation of esophageal squamous cell carcinoma associated with poor prognosis	34
Histamine and histidine decarboxylase: Immunomodulatory functions and regulatory mechanisms	24
Efficient and multiplexable genome editing using Platinum TALENs in oleaginous microalga, Nannochloropsis oceanica NIES‐2145	22
Multimeric conformation of type III intermediate filaments but not the filamentous conformation exhibits high affinity to lipid bilayers	21
An ALS‐associated KIF5A mutant forms oligomers and aggregates and induces neuronal toxicity	21
The role of eutherian‐specific RTL1 in the nervous system and its implications for the Kagami‐Ogata and Temple syndromes	20
Visualizing looping of two endogenous genomic loci using synthetic zinc‐finger proteins with anti‐FLAG and anti‐HA frankenbodies in living cells	14
YkgM and YkgO maintain translation by replacing their paralogs, zinc‐binding ribosomal proteins L31 and L36, with identical activities	14
Divergence of Drosophila species: Longevity and reproduction under different nutrient balances	12
RNA polymerase II condensate formation and association with Cajal and histone locus bodies in living human cells	12
Improved anti‐solid tumor response by humanized anti‐podoplanin chimeric antigen receptor transduced human cytotoxic T cells in an animal model	12
Meflin defines mesenchymal stem cells and/or their early progenitors with multilineage differentiation capacity	11
MiR‐382‐5p suppresses M1 macrophage polarization and inflammatory response in response to bronchopulmonary dysplasia through targeting CDK8: Involving inhibition of STAT1 pathway	11
(Pro)renin receptor/ATP6AP2 is required for autophagy and regulates proliferation in lung adenocarcinoma cells	10
VCP relocalization limits mitochondrial activity, GSH depletion and ferroptosis during starvation in PC3 prostate cancer cells	10
XRCC1 counteracts poly(ADP ribose)polymerase (PARP) poisons, olaparib and talazoparib, and a clinical alkylating agent, temozolomide, by promoting the removal of trapped PARP1 fr	10
Sonic hedgehog signals hinder the transcriptional network necessary for pancreatic endoderm formation from human embryonic stem cells	10
Overexpression of neural miRNAs miR‐9/9* and miR‐124 suppresses differentiation to Müller glia and promotes differentiation to neurons in mouse retina in vivo	10
Human SIRT2 and SIRT3 deacetylases function in DNA homologous recombinational repair	10
Sulfur depletion induces autophagy through Ecl1 family genes in fission yeast	10
Sonic hedgehog expands neural stem cells in the neocortical region leading to an expanded and wrinkled neocortical surface	9
G‐quadruplex‐forming nucleic acids interact with splicing factor 3B subunit 2 and suppress innate immune gene expression	9
Chromatin remodeling in replication‐uncoupled maintenance DNA methylation and chromosome stability: Insights from ICF syndrome studies	9
A simple and practical workflow for genotyping of CRISPR–Cas9‐based knockout phenotypes using multiplexed amplicon sequencing	9

The N‐terminal and C‐terminal halves of histone H2A.Z independently function in nucleosome positioning and stability	9
miR‐29c‐3p regulates TET2 expression and inhibits autophagy process in Parkinson's disease models	9
Development of a portable reverse transcription loop‐mediated isothermal amplification system to detect the E1 region of Chikungunya virus in a cost‐effective manner	9
Identification and characterization of the antigen recognized by the germ cell mAb TRA98 using a human comprehensive wet protein array	8
Extension of chronological lifespan in Schizosaccharomyces pombe	8
Chromosome counting in the mouse zygote using low‐invasive super‐resolution live‐cell imaging	8
Roles of the second messenger c‐di‐GMP in bacteria: Focusing on the topics of flagellar regulation and Vibrio spp.	8
Amyotrophic lateral sclerosis‐associated Vap33 is required for maintaining neuronal dendrite morphology and organelle distribution in Drosophila	8
Homeodomain protein DLX4 facilitates nasopharyngeal carcinoma progression via up‐regulation of YB‐1	7
Characterization of human‐induced pluripotent stem cells carrying homozygous RB1 gene deletion	7
SET‐NUP214 and MLL cooperatively regulate the promoter activity of the HoxA10 gene	6
14–3‐3γ prevents centrosome duplication by inhibiting NPM1 function	6
Necdin: A purposive integrator of molecular interaction networks for mammalian neuron vitality	6
Characterization of phalloidin‐negative nuclear actin filaments in U2OS cells expressing cytoplasmic actin‐EGFP	6
Ubiquitination‐dependent and ‐independent repression of target genes by SETDB1 reveal a context‐dependent role for its methyltransferase activity during adipogenesis	6
Intracellular ATP levels influence cell fates in Dictyostelium discoideum differentiation	6
polished rice mediates ecdysone‐dependent control of Drosophila embryonic organogenesis	6
Importin α2 association with chromatin: Direct DNA binding via a novel DNA‐binding domain	6
TDP2 suppresses genomic instability induced by androgens in the epithelial cells of prostate glands	6
UV‐induced DNA damage disrupts the coordination between replication initiation, elongation and completion	6
Mulberry fruit extract alleviates the intracellular amyloid‐β oligomer‐induced cognitive disturbance and oxidative stress in Alzheimer’s disease model mice	6
Transcriptome analysis of gene expression changes upon enzymatic dissociation in skeletal myoblasts	6
H3K27me3 demethylase UTX regulates the differentiation of a subset of bipolar cells in the mouse retina	6
Protease inhibitory activity of secretory leukocyte protease inhibitor ameliorates murine experimental colitis by protecting the intestinal epithelial barrier	6
Polyvinyl alcohol scaffolds and supplementation support 3D and sphere culturing of human cancer cell lines by reducing apoptosis and promoting cellular proliferation	6
Reversible expansion of pancreatic islet progenitors derived from human induced pluripotent stem cells	6
Expression of Cds4/5 of Arabidopsis chloroplasts in E. coli reveals the membrane topology of the C‐terminal region of CDP‐diacylglycerol synthases	5
Planar cell polarity protein Vangl2 and its interacting protein Ap2m1 regulate dendritic branching in cortical neurons	5
Maternal stress suppresses cell proliferation in the forebrain of zebrafish larvae	5
Pbp1 mediates the aberrant expression of genes involved in growth defect of ccr4∆ and pop2∆ mutants in yeast Saccharomyces cerevisiae	5
The intrinsically disordered N‐terminal region of mouse DNA polymerase alpha mediates its interaction with POT1a/b at telomeres	5
Over‐expression of Nicotinamide phosphoribosyltransferase in mouse cells confers protective effect against oxidative and ER stress‐induced premature senescence	5
Increased soluble (pro)renin receptor protein by autophagy inhibition in cultured cancer cells	5
Glioma cells remotely promote erythropoiesis as a self‐expanding strategy of cancer stem cells	5
ISG20 and nuclear exosome promote destabilization of nascent transcripts for spliceosomal U snRNAs and U1 variants	5
PMEPA1/TMEPAI isoforms function via its PY and Smad‐interaction motifs for tumorigenic activities of breast cancer cells	5
Deltex positively regulates Toll signaling in a JNK independent manner in Drosophila	5
Vrk2 deficiency elicits aggressive behavior in female zebrafish	5
Skp2 contributes to cell cycle progression in trophoblast stem cells and to placental development	5
Elevated CO2 promotes satellite stomata production in young cotyledons of Arabidopsis thaliana	5
Dynein intermediate chains DYCI‐1 and WDR‐60 have specific functions in Caenorhabditis elegans	5
Fission yeast Ish1 and Les1 interact with each other in the lumen of the nuclear envelope	4
Periodic albinism of a widely used albino mutant of Xenopus laevis caused by deletion of two exons in the Hermansky–Pudlak syndrome type 4 gene	4
Drosophila telomere capping protein HOAP interacts with DSB sensor proteins Mre11 and Nbs	4
Evaluation of repair activity by quantification of ribonucleotides in the genome	4
The SUN1 splicing variants SUN1_888 and SUN1_916 differentially regulate nucleolar structure	4
Identification of ksg1 mutation showing long‐lived phenotype in fission yeast	4
Biochemical propensity mapping for structural and functional anatomy of importin α IBB domain	4
Production of therapeutic iduronate‐2‐sulfatase enzyme with a novel single‐stranded RNA virus vector	4
Development of novel potent ligands for GPR85, an orphan G protein‐coupled receptor expressed in the brain	4

TAZ inhibits acinar cell differentiation but promotes immature ductal cell proliferation in adult mouse salivary glands	4
Horizontal transfer of domains in ssrA gene among Enterobacteriaceae	4
Enhancement of leukemia‐like phenotypes in Drosophila mxc mutant larvae due to activation of the RAS‐MAP kinase cascade possibly via down‐regulation of DE‐cadherin	4
The structure of POMGNT2 provides new insights into the mechanism to determine the functional O‐mannosylation site on α‐dystroglycan	4
Dorsal–lateral clock neurons modulate consolidation and maintenance of long‐term memory in Drosophila	4
Histone variant H2A.Z plays multiple roles in the maintenance of heterochromatin integrity	4
Cytoplasmic granule formation by FUS‐R495X is attributable to arginine methylation in all Gly‐rich, RGG1 and RGG2 domains	4
Potential involvement of DSCAML1 mutations in neurodevelopmental disorders	4
Effect of volatile fatty acids on adipocyte differentiation in bovine dedifferentiated fat (DFAT) cells in vitro	4
Post‐translational modifications of proteins associated with yeast peroxisome membrane: An essential mode of regulatory mechanism	4
Rapid turnover of transcription factor Rim101 confirms a flexible adaptation mechanism against environmental stress in Saccharomyces cerevisiae	4
Growth and division mode plasticity is dependent on cell density in marine‐derived black yeasts	4
LincRNA‐p21 exon 1 expression correlates with Cdkn1a expression in vivo	3
SH3P2 suppresses osteoclast differentiation through restricting membrane localization of myosin 1E	3
Human THO maintains the stability of repetitive DNA	3
Circadian expression of Glycoprotein 2 (Gp2) gene is controlled by a molecular clock in mouse Peyer's patches	3
ZomB is essential for chemotaxis of Vibrio alginolyticus by the rotational direction control of the polar flagellar motor	3
Marsupial genome analysis suggests that satellite DNA formation from walb endogenous retrovirus is an event specific to the red‐necked wallaby	3
Down‐regulation of dual‐specificity phosphatase 6, a negative regulator of oncogenic ERK signaling, by ACA‐28 induces apoptosis in NIH/3T3 cells overexpressing HER2/ErbB2	3
BAP1 depletion in human B‐lymphoblast cells affects the production of innate immune cytokines and chemokines	3
Establishment of a system for finding inhibitors of ε RNA binding with the HBV polymerase	3
Involvement of the synaptotagmin/stonin2 system in vesicular transport regulated by semaphorins in Caenorhabditis elegans epidermal cells	3
Identification of CD56dim subpopulation marked with high expression of GZMB/PRF1/PI‐9 in CD56+ interferon‐α‐induced dendritic cells	3
The structure–function analysis of Obg‐like GTPase proteins along the evolutionary tree from bacteria to humans	3
ETS‐dependent enhancers for endothelial‐specific expression of serum/glucocorticoid‐regulated kinase 1 during mouse embryo development	3
Formation of multiple flagella caused by a mutation of the flagellar rotor protein FliM in Vibrio alginolyticus	3
Enhanced Agrobacterium‐mediated transformation revealed attenuation of exogenous plasmid DNA installation in recipient bacteria by exonuclease VII and SbcCD	3
GATA2 participates in the recanalization of lymphatic vessels after surgical lymph node extirpation	3
Mitochondrial dynamics and degradation in the oleaginous yeast Lipomyces starkeyi	3
GM‐CSF‐producing CCR2+CCR6+ Th17 cells are pathogenic in dextran sodium sulfate‐induced colitis model in mice	3
The PAF1 complex cell autonomously promotes oogenesis in Caenorhabditis elegans	3
CREG1 improves diet‐induced obesity via uncoupling protein 1‐dependent manner in mice	2
Gre factors prevent thermal and mechanical stresses induced by terahertz irradiation during transcription	2
Systemic innate immune response induces death of olfactory receptor neurons in Drosophila	2
Local anesthetic lidocaine induces growth suppression of HeLa cells by decreasing and changing the cellular localization of the proliferation marker Ki‐67	2
Nondomain biopolymers: Flexible molecular strategies to acquire biological functions	2
Comprehensive lipidomics of lupus‐prone mice using LC–MS/MS identifies the reduction of palmitoylethanolamide that suppresses TLR9‐mediated inflammation	2
Differential effects of the formin inhibitor SMIFH2 on contractility and Ca2+ handling in frog and mouse cardiomyocytes	2
EGL‐4/PKG regulates the role of an interneuron in a chemotaxis circuit of C. elegans through mediating integration of sensory signals	2
Luciferase‐based quantification of membrane fusion induced by SARS‐CoV‐2 S protein	2
Ubiquitin proteasome system in circadian rhythm and sleep homeostasis: Lessons from Drosophila	2
A DNA repair player, ring finger protein 43, relieves etoposide‐induced topoisomerase II poisoning	2
GATA2 functions in adrenal chromaffin cells	2
Cysteine residues in the fourth zinc finger are important for activation of the nitric oxide‐inducible transcription factor Fzf1 in the yeast Saccharomyces cerevisiae	2
Yeast Tor complex 1 phosphorylates eIF4E‐binding protein, Caf20	2
A novel method to purify neutrophils enables functional analysis of zebrafish hematopoiesis	2
Physcomitrium patens pentatricopeptide repeat protein PpPPR_32 is involved in the accumulation of psaC mRNA encoding the iron sulfur protein of photosystem I	2
A nuclear pore complex‐associated regulation of SUMOylation in meiosis	2
Absence of ULK1 decreases AMPK activity in the kidney, leading to chronic kidney disease progression	2
Cdk1 negatively regulates the spindle localization of Prc1 in mouse oocytes	2
N‐(3,4‐dimethoxyphenethyl)‐6‐methyl‐2,3,4,9‐tetrahydro‐1H‐carbazol‐1‐amine inhibits bladder cancer progression by suppressing YAP1/TAZ	2
Immunoglobulin superfamily beat‐Ib mediates intestinal regeneration induced by reactive oxygen species in Drosophila	2
Meiotic DNA double‐strand break‐independent role of protein phosphatase 4 in Hop1 assembly to promote meiotic chromosome axis formation in budding yeast	2
Behavioral screening of sleep‐promoting effects of human intestinal and food‐associated bacteria on Drosophila melanogaster	2
Generation of metabolically functional hepatocyte‐like cells from dedifferentiated fat cells by Foxa2, Hnf4a and Sall1 transduction	2
Replacement of owl monkey centromere satellite by a newly evolved variant was a recent and rapid process	2
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Switching defective/sucrose non‐fermenting chromatin remodeling complex coordinates meiotic gene activation via promoter remodeling and Meiosin activation in female germline	2
Single‐shot quantitative phase imaging as an extension of differential interference contrast microscopy	2
MKK7 deficiency in mature neurons impairs parental behavior in mice	2
Red light‐regulated interaction of Per‐Arnt‐Sim histidine kinases with partner histidine‐containing phosphotransfer proteins in Physcomitrium patens	2
Di‐lysine motif‐like sequences formed by deleting the C‐terminal domain of aquaporin‐4 prevent its trafficking to the plasma membrane	2
Amphibian thrombocyte‐derived extracellular vesicles, including microRNAs, induce angiogenesis‐related genes in endothelial cells	2
Inhibition of lipopolysaccharide‐induced inflammatory responses by 1′‐acetoxychavicol acetate	2
Quick validation of genetic quality for conditional alleles in mice	2
TET3 dioxygenase modulates gene conversion at the avian immunoglobulin variable region via demethylation of non‐CpG sites in pseudogene templates	2
Trimethylguanosine synthase 1 (Tgs1) is involved in Swi6/HP1‐independent siRNA production and establishment of heterochromatin in fission yeast	2
Lineage tracing identifies in vitro microglia‐to‐neuron conversion by NeuroD1 expression	2
Microtubule inhibitors identified through nonbiased screening enhance DNA transfection efficiency by delaying p62‐dependent ubiquitin recruitment	2
Chemical genetic analysis of FTY720‐ and Ca2+‐sensitive mutants reveals a functional connection between FTY720 and membrane trafficking	1
Maternal epigenetic factors in embryonic and postnatal development	1
Characterization of mouse embryonic fibroblasts derived from Rassf6 knockout mice shows the implication of Rassf6 in the regulation of NF‐κB signaling	1
Unbiased prediction of off‐target sites in genome‐edited rice using SITE‐Seq analysis on a web‐based platform	1
Potential negative effect of total parenteral nutrition on the human circadian clock	1
Regulation mechanisms of CARMA1–Bcl10–MALT1 complex assembly inferred from the analysis of TRAF6‐deficient cells	1
Unpaired nucleotides on the stem of microRNA precursor are important for precise cleavage by Dicer‐like 1 in Arabidopsis	1
Generating a new mouse model for nuclear PTEN deficiency by a single K13R mutation	1
UV‐induced activation of ATR is mediated by UHRF2	1
A simple, rapid, and efficient method for generating multigene‐knockout culture cells by the CRISPR/Cas9 system	1
E‐cadherin‐dependent coordinated epithelial rotation on a two‐dimensional discoidal pattern	1

Rhythmic adenosine triphosphate release from the cyanobacterial circadian clock protein KaiC revealed by real‐time monitoring of bioluminescence using firefly luciferase	1
Genetic inhibition of collapsin response mediator protein‐2 phosphorylation ameliorates retinal ganglion cell death in normal‐tension glaucoma models	1
PARP1 is activated by membrane damage and is involved in membrane repair through poly(ADP‐ribosyl)ation	1
Quick and affordable DNA cloning by reconstitution of Seamless Ligation Cloning Extract using defined factors	1
The joy of the 11th International Fission Yeast Meeting in Hiroshima (POMBE2023 Hiroshima) after a long wait due to the COVID‐19 pandemic	1
The ribonuclease domain function is dispensable for SLFN11 to mediate cell fate decision during replication stress response	1
Intranasal Sendai virus‐based SARS‐CoV‐2 vaccine using a mouse model	1
Autonomous and intercellular chemokine signaling elicited from mesenchymal stem cells regulates migration of undifferentiated gastric cancer cells	1
The role of Zfp352 in the regulation of transient expression of 2‐cell specific genes in mouse embryonic stem cells	1
Single‐cell dissection reveals the role of DNA damage response patterns in tumor microenvironment components contributing to colorectal cancer progression and immunotherapy	1
Researchers support preprints and open access publishing, but with reservations: A questionnaire survey of MBSJ members	1
Egg components reverse the atrophy induced by injury in skeletal muscles	1
Breaking self‐regulation of Regnase‐1 promotes its own protein expression	1
INT6/eIF3e represses E‐cadherin expression through HIF2α in lung carcinoma A549 cells	1
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Effect of eribulin on epithelial–mesenchymal transition plasticity in metastatic breast cancer: An exploratory, prospective study	1
The TIGD5 gene located in 8q24 and frequently amplified in ovarian cancers is a tumor suppressor	1
Loss of Caenorhabditis elegans homologue of human MOB4 compromises life span, health life span and thermotolerance	1
The cell type‐specific ER membrane protein UGS148 is not essential in mice	1
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Stimulatory role of nectin‐4 and p95‐ErbB2 in multilayered T47D cell proliferation	1
Transcriptional regulation of adipogenin expression in liver steatosis by hepatic peroxisome proliferator‐activated receptor gamma	1
The impact of SETBP1 mutations in neurological diseases and cancer	1
Interleukin‐3‐dependent potentiation of IgE responsiveness in mouse basophils	1
Delineation of biliary epithelial cell dynamics in maternal liver during pregnancy	1
Dynamics of actomyosin filaments in the contractile ring revealed by ultrastructural analysis	1
Lumicrine signaling: Extracellular regulation of sperm maturation in the male reproductive tract lumen	1
Role for phagocytosis in the prevention of neoplastic transformation in Drosophila	1
Visualization of the landscape of the read alignment shape of ATAC‐seq data using Hellinger distance metric	1
Regulation of constant cell elongation and Sfm pili synthesis in Escherichia coli via two active forms of FimZ orphan response regulator	1
Machine learning extracts oncogenic‐specific γ‐H2AX foci formation pattern upon genotoxic stress	0
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Physiological concentrations of glucocorticoids induce pathological DNA double‐strand breaks	0
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Wnt 2022 EMBO | the Company of Biologists workshop and Yamada conference	0
Mapping of the regions implicated in nuclear localization of multi‐functional DNA repair endonuclease XPF‐ERCC1	0
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DNA double‐strand breaks regulate the cleavage‐independent release of Rec8‐cohesin during yeast meiosis	0
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GTP‐dependent regulation of heterochromatin fluctuations at subtelomeric regions in Saccharomyces cerevisiae	0
N‐terminal Ago‐binding domain of GW182 contains a tryptophan‐rich region that confer binding to the CCR4–NOT complex	0
The toxicity of dysregulated Plk1 activity revealed by its suppressor mutations	0
CdsA, a CDP‐diacylglycerol synthase involved in phospholipid and glycolipid MPIase biosynthesis, possesses multiple initiation codons	0
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GPR56 C‐terminal fragment mediates signal received by N‐terminal fragment of another adhesion GPCR Latrophilin1 in neurons	0
Expression of lipid transport‐associated genes in lipid‐deprived cancer cells	0
Analysis method of cellular stress caused by intermediate dose‐rate irradiation using a cell lysate array technique	0
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Potential of HMGB‐inhibitory oligodeoxynucleotide ISM ODN to neutrophil recruitment in mouse model of hepatitis	0
Mutations equivalent to Drosophila mago nashi mutants imply reduction of Magoh protein incorporation into exon junction complex	0
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Metastatic potentials classified with hypoxia‐inducible factor 1 downstream genes in pan‐cancer cell lines	0
Correction to ‘The role of transcriptional coactivator TRAP220 in myelomonocytic differentiation’	0
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Daidara: A gigantic Gypsy LTR retrotransposon lineage in the springtail Allacma fusca genome	0
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Rapalog‐induced cell adhesion molecule inhibits mesoderm migration in Xenopus embryos by increasing frequency of adhesion to the ectoderm	0
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The 6th international cell senescence association conference	0
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The 33rd International Conference on Arabidopsis Research (ICAR2023)	0
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Meeting report: AT workshop 2023—A platform for discussing cutting‐edge science in DNA damage signaling, repair, and human disorders	0
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ACAGT‐007a, an anti‐cancer compound that modulates ERK MAPK signaling, induces nuclear enrichment of phosphorylated ERK in T3M4 pancreatic cancer cells	0
Cdc7 kinase is required for postnatal brain development	0
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Pkd2, mutations linking to autosomal dominant polycystic kidney disease, localizes to the endoplasmic reticulum and regulates calcium signaling in fission yeast	0
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DHX36 maintains genomic integrity by unwinding G‐quadruplexes	0
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Identification of responsible amino acid residues in staphylococcal superantigen‐like 12 for the activation of mast cells	0
Differential dependence on microbiota of IL‐23/IL‐22‐dependent gene expression between the small‐ and large‐intestinal epithelia	0
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Subacute exposure to bisphenol F diglycidyl‐ether induces chronic dermatitis characterized by psoriasis‐like skin inflammation in mice	0
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The iron chelator deferriferrichrysin induces paraptosis via extracellular signal‐related kinase activation in cancer cells	0