Cell Death and Differentiation

Papers
(The TQCC of Cell Death and Differentiation is 26. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-10-01 to 2024-10-01.)
ArticleCitations
COVID-19 vaccines: where we stand and challenges ahead625
Cell cycle regulation: p53-p21-RB signaling449
Loss of ferroportin induces memory impairment by promoting ferroptosis in Alzheimer’s disease355
Molecular mechanisms of cell death in neurological diseases347
Cellular degradation systems in ferroptosis342
The multifaceted role of ferroptosis in liver disease296
p53 in ferroptosis regulation: the new weapon for the old guardian257
Lactate promotes macrophage HMGB1 lactylation, acetylation, and exosomal release in polymicrobial sepsis244
An aberrant STAT pathway is central to COVID-19229
Ubiquitin signalling in neurodegeneration: mechanisms and therapeutic opportunities228
Ubiquitination in the regulation of inflammatory cell death and cancer201
Patients with COVID-19: in the dark-NETs of neutrophils197
Organelle-specific regulation of ferroptosis190
Ubiquitin signaling in cell cycle control and tumorigenesis185
Wnt/beta-catenin signaling confers ferroptosis resistance by targeting GPX4 in gastric cancer169
Specific expression and functions of circular RNAs164
Ferroptotic pores induce Ca2+ fluxes and ESCRT-III activation to modulate cell death kinetics160
PRMT4 promotes ferroptosis to aggravate doxorubicin-induced cardiomyopathy via inhibition of the Nrf2/GPX4 pathway153
Branched-chain amino acid aminotransferase 2 regulates ferroptotic cell death in cancer cells131
Oxygenated phosphatidylethanolamine navigates phagocytosis of ferroptotic cells by interacting with TLR2128
Apoptotic cell death in disease—Current understanding of the NCCD 2023127
Targeting mitochondrial metabolism for precision medicine in cancer127
SOCS2-enhanced ubiquitination of SLC7A11 promotes ferroptosis and radiosensitization in hepatocellular carcinoma121
Ki-67 gene expression120
SARS-CoV-2 spike protein dictates syncytium-mediated lymphocyte elimination120
Peroxisome-driven ether-linked phospholipids biosynthesis is essential for ferroptosis119
The ubiquitin system: from cell signalling to disease biology and new therapeutic opportunities113
SARS-CoV-2 non-structural protein 6 triggers NLRP3-dependent pyroptosis by targeting ATP6AP1113
Long noncoding RNA NEAT1 promotes ferroptosis by modulating the miR-362-3p/MIOX axis as a ceRNA108
Mitochondria and cell death-associated inflammation107
T cell apoptosis characterizes severe Covid-19 disease104
YTHDC1-mediated augmentation of miR-30d in repressing pancreatic tumorigenesis via attenuation of RUNX1-induced transcriptional activation of Warburg effect103
lncRNA THAP7-AS1, transcriptionally activated by SP1 and post-transcriptionally stabilized by METTL3-mediated m6A modification, exerts oncogenic properties by improving CUL4B entry into the nucleus101
The role of Ubiquitination in Apoptosis and Necroptosis97
GSDME-mediated pyroptosis promotes inflammation and fibrosis in obstructive nephropathy94
Deubiquitinating enzyme OTUB1 promotes cancer cell immunosuppression via preventing ER-associated degradation of immune checkpoint protein PD-L193
Roles and mechanisms of BAP1 deubiquitinase in tumor suppression90
WTAP-mediated m6A modification of lncRNA DIAPH1-AS1 enhances its stability to facilitate nasopharyngeal carcinoma growth and metastasis87
Cell death and inflammation during obesity: “Know my methods, WAT(son)”87
Immune response in COVID-19: what is next?86
Mutant p53: it’s not all one and the same86
Cuproptosis: p53-regulated metabolic cell death?85
Identity, structure, and function of the mitochondrial permeability transition pore: controversies, consensus, recent advances, and future directions82
USP11 regulates autophagy-dependent ferroptosis after spinal cord ischemia-reperfusion injury by deubiquitinating Beclin 181
ER-mitochondria contact sites in neurodegeneration: genetic screening approaches to investigate novel disease mechanisms81
MLKL in cancer: more than a necroptosis regulator80
The regulation of necroptosis by post-translational modifications79
KPNB1-mediated nuclear translocation of PD-L1 promotes non-small cell lung cancer cell proliferation via the Gas6/MerTK signaling pathway78
Intestinal microbiota influences clinical outcome and side effects of early breast cancer treatment78
Past, present, and future perspectives of transcription factor EB (TFEB): mechanisms of regulation and association with disease77
Ferroptosis mediates selective motor neuron death in amyotrophic lateral sclerosis76
Non-coding RNAs and ferroptosis: potential implications for cancer therapy76
Deubiquitinase USP39 and E3 ligase TRIM26 balance the level of ZEB1 ubiquitination and thereby determine the progression of hepatocellular carcinoma75
Organoid-based modeling of intestinal development, regeneration, and repair72
Photoreceptor protection by mesenchymal stem cell transplantation identifies exosomal MiR-21 as a therapeutic for retinal degeneration72
Functions of outer mitochondrial membrane proteins: mediating the crosstalk between mitochondrial dynamics and mitophagy71
The TP53 Database: transition from the International Agency for Research on Cancer to the US National Cancer Institute71
The intrinsic immunogenic properties of cancer cell lines, immunogenic cell death, and how these influence host antitumor immune responses70
IL-24 deficiency protects mice against bleomycin-induced pulmonary fibrosis by repressing IL-4-induced M2 program in macrophages70
Mitophagy protein PINK1 suppresses colon tumor growth by metabolic reprogramming via p53 activation and reducing acetyl-CoA production69
Pathologically high intraocular pressure disturbs normal iron homeostasis and leads to retinal ganglion cell ferroptosis in glaucoma69
Syncytia formation during SARS-CoV-2 lung infection: a disastrous unity to eliminate lymphocytes67
p53 at the crossroad of DNA replication and ribosome biogenesis stress pathways65
The lipid peroxidation product 4-hydroxynonenal inhibits NLRP3 inflammasome activation and macrophage pyroptosis65
Single-cell RNA sequencing reveals intratumoral heterogeneity in primary uveal melanomas and identifies HES6 as a driver of the metastatic disease64
Ubiquitin ligase E3 HUWE1/MULE targets transferrin receptor for degradation and suppresses ferroptosis in acute liver injury64
EBV infection-induced GPX4 promotes chemoresistance and tumor progression in nasopharyngeal carcinoma62
Gastric organoids—an in vitro model system for the study of gastric development and road to personalized medicine62
RIP1 kinase activity promotes steatohepatitis through mediating cell death and inflammation in macrophages61
Should mutant TP53 be targeted for cancer therapy?61
M6A RNA methylation-mediated RMRP stability renders proliferation and progression of non-small cell lung cancer through regulating TGFBR1/SMAD2/SMAD3 pathway59
Inhibition of Drp1 SUMOylation by ALR protects the liver from ischemia-reperfusion injury59
PLK1/vimentin signaling facilitates immune escape by recruiting Smad2/3 to PD-L1 promoter in metastatic lung adenocarcinoma58
Elevated FSP1 protects KRAS-mutated cells from ferroptosis during tumor initiation57
Ubiquitination of NF-κB p65 by FBXW2 suppresses breast cancer stemness, tumorigenesis, and paclitaxel resistance55
E6-mediated activation of JNK drives EGFR signalling to promote proliferation and viral oncoprotein expression in cervical cancer55
Of the many cellular responses activated by TP53, which ones are critical for tumour suppression?53
ALS motor neurons exhibit hallmark metabolic defects that are rescued by SIRT3 activation53
N6-Methyladenosine-modified circSAV1 triggers ferroptosis in COPD through recruiting YTHDF1 to facilitate the translation of IREB253
Ubiquitin signaling in neurodegenerative diseases: an autophagy and proteasome perspective52
Harnessing TRAIL-induced cell death for cancer therapy: a long walk with thrilling discoveries51
Efferocytosis potentiates the expression of arachidonate 15-lipoxygenase (ALOX15) in alternatively activated human macrophages through LXR activation51
Primidone blocks RIPK1-driven cell death and inflammation51
Neuronal cell life, death, and axonal degeneration as regulated by the BCL-2 family proteins50
LncRNA NEAT1 controls the lineage fates of BMSCs during skeletal aging by impairing mitochondrial function and pluripotency maintenance50
Regulation of Bcl-XL by non-canonical NF-κB in the context of CD40-induced drug resistance in CLL50
Circular RNA Cwc27 contributes to Alzheimer’s disease pathogenesis by repressing Pur-α activity49
MYH9-dependent polarization of ATG9B promotes colorectal cancer metastasis by accelerating focal adhesion assembly49
The role of E3 ubiquitin ligases in the development and progression of glioblastoma49
SARS-CoV-2 membrane protein causes the mitochondrial apoptosis and pulmonary edema via targeting BOK48
Histone deacetylase 3 aberration inhibits Klotho transcription and promotes renal fibrosis48
Functional crosstalk between myeloid Foxo1–β-catenin axis and Hedgehog/Gli1 signaling in oxidative stress response48
DAPK3 inhibits gastric cancer progression via activation of ULK1-dependent autophagy48
Kupffer cell receptor CLEC4F is important for the destruction of desialylated platelets in mice47
Bcl-xL acts as an inhibitor of IP3R channels, thereby antagonizing Ca2+-driven apoptosis47
Glycoprotein PTGDS promotes tumorigenesis of diffuse large B-cell lymphoma by MYH9-mediated regulation of Wnt–β-catenin–STAT3 signaling46
USP9X-mediated KDM4C deubiquitination promotes lung cancer radioresistance by epigenetically inducing TGF-β2 transcription46
The Met1-linked ubiquitin machinery in inflammation and infection45
A toolbox for imaging RIPK1, RIPK3, and MLKL in mouse and human cells45
The circRNA CNEACR regulates necroptosis of cardiomyocytes through Foxa2 suppression45
Inhibition of cGAS-STING by JQ1 alleviates oxidative stress-induced retina inflammation and degeneration45
YAP–TEAD1 control of cytoskeleton dynamics and intracellular tension guides human pluripotent stem cell mesoderm specification44
O-GlcNAcylation of MORC2 at threonine 556 by OGT couples TGF-β signaling to breast cancer progression44
Epithelium- and endothelium-derived exosomes regulate the alveolar macrophages by targeting RGS1 mediated calcium signaling-dependent immune response44
Snail/PRMT5/NuRD complex contributes to DNA hypermethylation in cervical cancer by TET1 inhibition44
Selective ferroptosis vulnerability due to familial Alzheimer’s disease presenilin mutations43
Building inner ears: recent advances and future challenges for in vitro organoid systems43
SPY1 inhibits neuronal ferroptosis in amyotrophic lateral sclerosis by reducing lipid peroxidation through regulation of GCH1 and TFR143
TLR4 downregulation by the RNA-binding protein PUM1 alleviates cellular aging and osteoarthritis42
Repurposing the estrogen receptor modulator raloxifene to treat SARS-CoV-2 infection42
Exosomal miR-101-3p and miR-423-5p inhibit medulloblastoma tumorigenesis through targeting FOXP4 and EZH241
p53-dependent elimination of aneuploid mitotic offspring by entosis41
Comorbidity-associated glutamine deficiency is a predisposition to severe COVID-1941
Build-UPS and break-downs: metabolism impacts on proteostasis and aging40
MS4A15 drives ferroptosis resistance through calcium-restricted lipid remodeling40
A novel HIF-2α targeted inhibitor suppresses hypoxia-induced breast cancer stemness via SOD2-mtROS-PDI/GPR78-UPRER axis39
TRIM26 positively regulates the inflammatory immune response through K11-linked ubiquitination of TAB139
SARS-CoV-2 N501Y variants of concern and their potential transmission by mouse38
Met1-linked ubiquitin signalling in health and disease: inflammation, immunity, cancer, and beyond37
The DJ1-Nrf2-STING axis mediates the neuroprotective effects of Withaferin A in Parkinson’s disease37
The NSP14/NSP10 RNA repair complex as a Pan-coronavirus therapeutic target37
Loss of RBMS1 promotes anti-tumor immunity through enabling PD-L1 checkpoint blockade in triple-negative breast cancer37
RUNX2 recruits the NuRD(MTA1)/CRL4B complex to promote breast cancer progression and bone metastasis37
Kdm2a deficiency in macrophages enhances thermogenesis to protect mice against HFD-induced obesity by enhancing H3K36me2 at the Pparg locus37
Bedaquiline, an FDA-approved drug, inhibits mitochondrial ATP production and metastasis in vivo, by targeting the gamma subunit (ATP5F1C) of the ATP synthase36
Deubiquitination of MYC by OTUB1 contributes to HK2 mediated glycolysis and breast tumorigenesis36
TRIM21 regulates pyroptotic cell death by promoting Gasdermin D oligomerization36
Curcumin activates a ROS/KEAP1/NRF2/miR-34a/b/c cascade to suppress colorectal cancer metastasis36
Targeting androgen receptor (AR) with antiandrogen Enzalutamide increases prostate cancer cell invasion yet decreases bladder cancer cell invasion via differentially altering the AR/circRNA-ARC1/miR-135
O-GlcNAcylation and stablization of SIRT7 promote pancreatic cancer progression by blocking the SIRT7-REGγ interaction35
Sequential ubiquitination of p53 by TRIM28, RLIM, and MDM2 in lung tumorigenesis34
TCF3 is epigenetically silenced by EZH2 and DNMT3B and functions as a tumor suppressor in endometrial cancer34
dsDNA-induced AIM2 pyroptosis halts aberrant inflammation during rhabdomyolysis-induced acute kidney injury34
Hypoxia-induced GLT8D1 promotes glioma stem cell maintenance by inhibiting CD133 degradation through N-linked glycosylation34
A novel long noncoding RNA SP100-AS1 induces radioresistance of colorectal cancer via sponging miR-622 and stabilizing ATG333
Opposing functions of β-arrestin 1 and 2 in Parkinson’s disease via microglia inflammation and Nprl333
Reducing FASN expression sensitizes acute myeloid leukemia cells to differentiation therapy33
Repression of p53 function by SIRT5-mediated desuccinylation at Lysine 120 in response to DNA damage33
Selective autophagy controls the stability of TBK1 via NEDD4 to balance host defense32
Deubiquitylases in developmental ubiquitin signaling and congenital diseases32
TEAD1 protects against necroptosis in postmitotic cardiomyocytes through regulation of nuclear DNA-encoded mitochondrial genes32
SIRT1 coordinates with the CRL4B complex to regulate pancreatic cancer stem cells to promote tumorigenesis32
Breast cancer dependence on MCL-1 is due to its canonical anti-apoptotic function32
Long Covid: where we stand and challenges ahead32
Necroptosis is dispensable for the development of inflammation-associated or sporadic colon cancer in mice31
PKA compartmentalization links cAMP signaling and autophagy31
Genotoxic stress-activated DNA-PK-p53 cascade and autophagy cooperatively induce ciliogenesis to maintain the DNA damage response31
Targeting the miR-34a/LRPPRC/MDR1 axis collapse the chemoresistance in P53 inactive colorectal cancer31
SPOP mutations promote p62/SQSTM1-dependent autophagy and Nrf2 activation in prostate cancer31
The noncoding RNAs SNORD50A and SNORD50B-mediated TRIM21-GMPS interaction promotes the growth of p53 wild-type breast cancers by degrading p5331
Trends and challenges in modeling glioma using 3D human brain organoids31
Non-coding small nucleolar RNA SNORD17 promotes the progression of hepatocellular carcinoma through a positive feedback loop upon p53 inactivation31
BCL-XL is crucial for progression through the adenoma-to-carcinoma sequence of colorectal cancer31
Activation of Drp1 promotes fatty acids-induced metabolic reprograming to potentiate Wnt signaling in colon cancer31
Dying in self-defence: a comparative overview of immunogenic cell death signalling in animals and plants31
USP42 drives nuclear speckle mRNA splicing via directing dynamic phase separation to promote tumorigenesis30
Inhibiting the Pkm2/b-catenin axis drives in vivo replication of adult cardiomyocytes following experimental MI30
CDK15 promotes colorectal cancer progression via phosphorylating PAK4 and regulating β-catenin/ MEK-ERK signaling pathway30
Activating transcription factor-4 promotes neuronal death induced by Parkinson’s disease neurotoxins and α-synuclein aggregates29
Ubiquitin-dependent and -independent functions of OTULIN in cell fate control and beyond29
OTUB1 prevents lethal hepatocyte necroptosis through stabilization of c-IAP1 during murine liver inflammation29
Distinct GSDMB protein isoforms and protease cleavage processes differentially control pyroptotic cell death and mitochondrial damage in cancer cells29
Identification and functional characterization of new missense SNPs in the coding region of the TP53 gene29
Long noncoding RNA AVAN promotes antiviral innate immunity by interacting with TRIM25 and enhancing the transcription of FOXO3a29
E3 ligase TRIM25 ubiquitinates RIP3 to inhibit TNF induced cell necrosis29
YB-1 is a positive regulator of KLF5 transcription factor in basal-like breast cancer29
Structural diversity of p63 and p73 isoforms28
Kdm6a suppresses the alternative activation of macrophages and impairs energy expenditure in obesity28
Mitochondrial ATP synthase c-subunit leak channel triggers cell death upon loss of its F1 subcomplex28
Beyond DNA repair and chromosome instability—Fanconi anaemia as a cellular senescence-associated syndrome28
The osteoprotective role of USP26 in coordinating bone formation and resorption28
The integrated stress response in ischemic diseases28
Lymphotoxin: from the physiology to the regeneration of the thymic function27
The Smad4-MYO18A-PP1A complex regulates β-catenin phosphorylation and pemigatinib resistance by inhibiting PAK1 in cholangiocarcinoma27
Prolonged SARS-CoV-2 RNA virus shedding and lymphopenia are hallmarks of COVID-19 in cancer patients with poor prognosis27
RGS5–TGFβ–Smad2/3 axis switches pro- to anti-apoptotic signaling in tumor-residing pericytes, assisting tumor growth27
Long noncoding RNA ERLR mediates epithelial-mesenchymal transition of retinal pigment epithelial cells and promotes experimental proliferative vitreoretinopathy27
When cell death goes wrong: inflammatory outcomes of failed apoptosis and mitotic cell death27
Heart failure—emerging roles for the mitochondrial pyruvate carrier27
Serine-ubiquitination regulates Golgi morphology and the secretory pathway upon Legionella infection26
miR-125a-5p attenuates macrophage-mediated vascular dysfunction by targeting Ninjurin126
The long non-coding RNA PFI protects against pulmonary fibrosis by interacting with splicing regulator SRSF126
Ca2+-mediated mitochondrial inner membrane permeabilization induces cell death independently of Bax and Bak26
BAX and BAK dynamics control mitochondrial DNA release during apoptosis26
The genotypes and phenotypes of missense mutations in the proline domain of the p53 protein26
Single-cell RNA-seq reveals novel mitochondria-related musculoskeletal cell populations during adult axolotl limb regeneration process26
Targeting Cpt1a-Bcl-2 interaction modulates apoptosis resistance and fibrotic remodeling26
Sustained intracellular calcium rise mediates neuronal mitophagy in models of autosomal dominant optic atrophy26
Coordination between cell proliferation and apoptosis after DNA damage in Drosophila26
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