Microbiology-SGM

Article	Citations
Bacteria-induced mineral precipitation: a mechanistic review	67
A comprehensive list of bacterial pathogens infecting humans	60
Alternaria alternata as endophyte and pathogen	60
Polymyxin and lipopeptide antibiotics: membrane-targeting drugs of last resort	59
Role of bacterial efflux pumps in antibiotic resistance, virulence, and strategies to discover novel efflux pump inhibitors	46
Predatory bacteria as living antibiotics – where are we now?	36
Bacteriophage infection of Escherichia coli leads to the formation of membrane vesicles via both explosive cell lysis and membrane blebbing	34
Evolution of horizontal transmission in antimicrobial resistance plasmids	32
Extreme genetic diversity in the type VII secretion system of Listeria monocytogenes suggests a role in bacterial antagonism	31
Improved growth and morphological plasticity of Haloferax volcanii	31
Bacterial protein secretion systems: Game of types	28
Bacterial pore-forming toxins	27
The genetic basis of phage susceptibility, cross-resistance and host-range in Salmonella	27
The Legionella pneumophila Dot/Icm type IV secretion system and its effectors	25
Presence and absence of type VI secretion systems in bacteria	24
Multiple holins contribute to extracellular DNA release in Pseudomonas aeruginosa biofilms	24
A tale of two habitats: Bacteroides fragilis, a lethal pathogen and resident in the human gastrointestinal microbiome	23
Microcins reveal natural mechanisms of bacterial manipulation to inform therapeutic development	22
Adaptive laboratory evolution of Pseudomonas putida and Corynebacterium glutamicum to enhance anthranilate tolerance	22
Roles for phthiocerol dimycocerosate lipids in Mycobacterium tuberculosis pathogenesis	21
At the metal–metabolite interface in Aspergillus fumigatus: towards untangling the intersecting roles of zinc and gliotoxin	20
How bacteria utilize sialic acid during interactions with the host: snip, snatch, dispatch, match and attach	20
The general stress response of Staphylococcus aureus promotes tolerance of antibiotics and survival in whole human blood	19
Lactobacilli and human dental caries: more than mechanical retention	19
Frequency of quorum-sensing mutations in Pseudomonas aeruginosa strains isolated from different environments	18

Conserved and specialized functions of Type VII secretion systems in non-tuberculous mycobacteria	18
Effect of host-mimicking medium and biofilm growth on the ability of colistin to kill Pseudomonas aeruginosa	17
Fitness costs of CRISPR-Cas systems in bacteria	17
Killing in the name of: T6SS structure and effector diversity	17
Escherichia coli type-1 fimbriae are critical to overcome initial bottlenecks of infection upon low-dose inoculation in a porcine model of cystitis	17
Expansin-related proteins: biology, microbe–plant interactions and associated plant-defense responses	17
Colistin resistance in Escherichia coli confers protection of the cytoplasmic but not outer membrane from the polymyxin antibiotic	17
MexXY RND pump of Pseudomonas aeruginosa PA7 effluxes bi-anionic β-lactams carbenicillin and sulbenicillin when it partners with the outer membrane factor OprA but not with OprM	17
rpoB mutations conferring rifampicin-resistance affect growth, stress response and motility in Vibrio vulnificus	16
Microbe Profile: Legionella pneumophila - a copycat eukaryote	16
Speaking the host language: how Salmonella effector proteins manipulate the host	16
From infection niche to therapeutic target: the intracellular lifestyle of Mycobacterium tuberculosis	16
Microbe Profile: Bdellovibrio bacteriovorus: a specialized bacterial predator of bacteria	16
Ribosome hibernation: a new molecular framework for targeting nonreplicating persisters of mycobacteria	15
Quorum-sensing, intra- and inter-species competition in the staphylococci	15
Microbe Profile: Aeromonas salmonicida: an opportunistic pathogen with multiple personalities	15
Investigating zinc toxicity responses in marine Prochlorococcus and Synechococcus	15
Streptococcus pneumoniae, S. pyogenes and S. agalactiae membrane phospholipid remodelling in response to human serum	14
Effect of pH on the antimicrobial activity of the macrophage metabolite itaconate	14
A guide for membrane potential measurements in Gram-negative bacteria using voltage-sensitive dyes	14
An ex vivo cystic fibrosis model recapitulates key clinical aspects of chronic Staphylococcus aureus infection	14
The dilution effect limits plasmid horizontal transmission in multispecies bacterial communities	14
Of zones, bridges and chaperones – phospholipid transport in bacterial outer membrane assembly and homeostasis	14
Leafy greens as a potential source of multidrug-resistant diarrhoeagenic Escherichia coli and Salmonella	14
Remodelling of the Gram-negative bacterial Kdo2-lipid A and its functional implications	13
Characterization of an operon required for growth on cellobiose in Clostridioides difficile	13
Sustained coevolution of phage Lambda and Escherichia coli involves inner- as well as outer-membrane defences and counter-defences	13
Prevalence of multidrug-resistant coagulase-positive staphylococci in canine and feline dermatological patients over a 10-year period: a retrospective study	13
The FocA channel functions to maintain intracellular formate homeostasis during Escherichia coli fermentation	13
Siderophore piracy enhances Vibrio cholerae environmental survival and pathogenesis	13
Reclassification of the biocontrol agents Bacillus subtilis BY-2 and Tu-100 as Bacillus velezensis and insights into the genomic and specialized metabolite diversity of the species	12
A single amino acid exchange converts FocA into a unidirectional efflux channel for formate	12
Membrane lipids from gut microbiome-associated bacteria as structural and signalling molecules	12
What have molecular simulations contributed to understanding of Gram-negative bacterial cell envelopes?	12
A functional menadione biosynthesis pathway is required for capsule production by Staphylococcus aureus	11
Hydrogen production in the presence of oxygen by Escherichia coli K-12	11
Presence of optrA-mediated linezolid resistance in multiple lineages and plasmids of Enterococcus faecalis revealed by long read sequencing	11
The distribution of fitness effects of plasmid pOXA-48 in clinical enterobacteria	11
Symbiont-mediated immune priming in animals through an evolutionary lens	11
Structural and functional characteristics of the tripartite ABC transporter	11
Peptide transport in Bacillus subtilis – structure and specificity in the extracellular solute binding proteins OppA and DppE	10
Donor plasmids for phenotypically neutral chromosomal gene insertions in Enterobacteriaceae	10
Vitamin B12 biosynthesis of Cetobacterium ceti isolated from the intestinal content of captive common bottlenose dolphins (Tursiops truncatus)	10
Efflux-mediated tolerance to cationic biocides, a cause for concern?	10
Functional diversity increases the efficacy of phage combinations	10
Bacterial secretion system functions: evidence of interactions and downstream implications	10
The biogenesis of β-lactamase enzymes	10
Role of the gut microbiota in nutrient competition and protection against intestinal pathogen colonization	10
A palette of fluorophores that are differentially accumulated by wild-type and mutant strains of Escherichia coli: surrogate ligands for profiling bacterial membrane transporters	10
Rare actinobacteria isolated from the hypersaline Ojo de Liebre Lagoon as a source of novel bioactive compounds with biotechnological potential	10

Establishing a national reference laboratory for antimicrobial resistance using a whole-genome sequencing framework: Nigeria’s experience	9
Ruminococcus bromii enables the growth of proximal Bacteroides thetaiotaomicron by releasing glucose during starch degradation	9
Exposure to the Pseudomonas aeruginosa secretome alters the proteome and secondary metabolite production of Aspergillus fumigatus	9
Interspecies killing activity of Pseudomonas syringae tailocins	9
Isolation and characterization of bacteria from activated sludge capable of degrading 17α-ethinylestradiol, a contaminant of high environmental concern	9
Orchestrating a heist: uptake and storage of metals by apicomplexan parasites	9
Rv0802c is an acyltransferase that succinylates and acetylates Mycobacterium tuberculosis nucleoid-associated protein HU	9
A unique global metabolic trait of Pseudomonas bharatica CSV86T: metabolism of aromatics over simple carbon sources and co-metabolism with organic acids	9
CpxR regulates the Rcs phosphorelay system in controlling the Ysc-Yop type III secretion system in Yersinia pseudotuberculosis	9
Mechanism of assembly of type 4 filaments: everything you always wanted to know (but were afraid to ask)	9
A global perspective on bacterial diversity in the terrestrial deep subsurface	9
Cell-free supernatants produced by lactic acid bacteria reduce Salmonella population in vitro	9
Microbe Profile: Dictyostelium discoideum: model system for development, chemotaxis and biomedical research	9
Microbial Primer: An introduction to biofilms – what they are, why they form and their impact on built and natural environments	9
Tripartite efflux pumps of the RND superfamily: what did we learn from computational studies?	9
R-type bacteriocins of Xenorhabdus bovienii determine the outcome of interspecies competition in a natural host environment	9
A mutagenic screen reveals NspS residues important for regulation of Vibrio cholerae biofilm formation	9
Significant variability exists in the cytotoxicity of global methicillin-resistant Staphylococcus aureus lineages	8
Genome-wide analysis of genes involved in efflux function and regulation within Escherichia coli and Salmonella enterica serovar Typhimurium	8
The Bacillus virulome in endophthalmitis	8
E. coli ST11 (O157:H7) does not encode a functional AcrF efflux pump	8
A mathematician’s guide to plasmids: an introduction to plasmid biology for modellers	8
Topological analysis of a bacterial DedA protein associated with alkaline tolerance and antimicrobial resistance	8
Transient internalization of Campylobacter jejuni in Amoebae enhances subsequent invasion of human cells	8
FocA and its central role in fine-tuning pH homeostasis of enterobacterial formate metabolism	8
Role of Pel and Psl polysaccharides in the response of Pseudomonas aeruginosa to environmental challenges: oxidative stress agents (UVA, H2O2, sodium hypochlorite) and its competitor Staphylococcus au	8
Fungal endophytes from salt-adapted plants confer salt tolerance and promote growth in wheat (Triticum aestivum L.) at early seedling stage	8
Distribution of RecBCD and AddAB recombination-associated genes among bacteria in 33 phyla	8
The role of l-arabinose metabolism for Escherichia coli O157:H7 in edible plants	8
A NiCoT family metal transporter of Mycobacterium tuberculosis (Rv2856/NicT) behaves as a drug efflux pump that facilitates cross-resistance to antibiotics	8
A novel hemA mutation is responsible for a small-colony-variant phenotype in Escherichia coli	8
Microbe Profile: Buchnera aphidicola: ancient aphid accomplice and endosymbiont exemplar	8
The MpsB protein contributes to both the toxicity and immune evasion capacity of Staphylococcus aureus	8
The role of sigma factor competition in bacterial adaptation under prolonged starvation	8
Biofilms as protective cocoons against biocides: from bacterial adaptation to One Health issues	7
The role of nitrogen-responsive regulators in controlling inorganic polyphosphate synthesis in Escherichia coli	7
An OregonGreen488-labelled d-amino acid for visualizing peptidoglycan by super-resolution STED nanoscopy	7
PacBio sequencing revealed variation in the microbiota diversity, species richness and composition between milk collected from healthy and mastitis cows	7
Diverse functions for acyltransferase-3 proteins in the modification of bacterial cell surfaces	7
Berberine at sub-inhibitory concentration inhibits biofilm dispersal in Staphylococcus aureus	7
Regulation of type VI secretion systems at the transcriptional, posttranscriptional and posttranslational level	7
Two reasons to kill: predation and kin discrimination in myxobacteria	7
Tn1 transposition in the course of natural transformation enables horizontal antibiotic resistance spread in Acinetobacter baylyi	7
The impact of intra-specific diversity in the rhizobia-legume symbiosis	7
Interplay between central carbon metabolism and metal homeostasis in mycobacteria and other human pathogens	7
Analysis of mouse faecal dysbiosis, during the development of cachexia, induced by transplantation with Lewis lung carcinoma cells	7
Biofilm hydrophobicity in environmental isolates of Bacillus subtilis	7
Wildy Prize Lecture, 2020–2021: Who wouldn’t want to discover a new virus?	7
Hydrogen peroxide, sodium dichloro-s-triazinetriones and quaternary alcohols significantly inactivate the dry-surface biofilms of Staphylococcus aureus and Pseudomonas aeruginosa more than quaternary	7
Influence of core divisome proteins on cell division in Streptomyces venezuelae ATCC 10712	7
Multifunctional transcription factor CytR of Vibrio cholerae is important for pathogenesis	7
Role of horizontally transferred copper resistance genes in Staphylococcus aureus and Listeria monocytogenes	7
Disruption of MenT2 toxin impairs the growth of Mycobacterium tuberculosis in guinea pigs	7
Oral probiotic and its delivery carriers to improve oral health: A review	7
A journey with type IX secretion system effectors: selection, transport, processing and activities	7
Alanine-scanning mutagenesis of protein mannosyl-transferase from Streptomyces coelicolor reveals strong activity-stability correlation	7
Bacterial survivors: evaluating the mechanisms of antibiotic persistence	6
The lipoprotein DolP affects cell separation in Escherichia coli, but not as an upstream regulator of NlpD	6
Minority potassium-uptake system Trk2 has a crucial role in yeast survival of glucose-induced cell death	6
Drug resistance and physiological roles of RND multidrug efflux pumps in Salmonella enterica, Escherichia coli and Pseudomonas aeruginosa	6
Membrane lipid and osmolyte readjustment in the alkaliphilic micromycete Sodiomyces tronii under cold, heat and osmotic shocks	6
Microbe Profile: Xylella fastidiosa – a devastating agricultural pathogen with an endophytic lifestyle	6
Microbiology challenges and opportunities in the circular economy	6
Lactic acid bacterial exopolysaccharides strongly bind histamine and can potentially be used to remove histamine contamination in food	6
Promiscuous evolution of Group A Streptococcal M and M-like proteins	6
Antimicrobial resistance in Bacillus-based biopesticide products	6
Impact of growth media and pressure on the diversity and antimicrobial activity of isolates from two species of hexactinellid sponge	6
Biochemical and functional characterization of Mycobacterium tuberculosis ketol-acid reductoisomerase	6
DNA binding and gene regulatory functions of MSMEG_2295, a repressor encoded by the dinB2 operon of Mycobacterium smegmatis	6
A bacterial secretosome for regulated envelope biogenesis and quality control?	6
Markerless gene editing in Neisseria gonorrhoeae	6
Virulence-associated type III secretion systems in Gram-negative bacteria	6
A type IVB pilin influences twitching motility and in vitro adhesion to epithelial cells in Burkholderia pseudomallei	6
Regulatory role of CsuR (YiaU) in determination of cell surface properties of Escherichia coli K-12	6
Activation of TnSmu1, an integrative and conjugative element, by an ImmR-like transcriptional regulator in Streptococcus mutans	5
The pharmacokinetic–pharmacodynamic modelling framework as a tool to predict drug resistance evolution	5
Functional characterization of the transcription regulator WhiB1 from Gordonia sp. IITR100	5
Genomic deletions in Rhodococcus based on transformation of linear heterologous DNA	5
Identification of a novel gene required for competitive growth at high temperature in the thermotolerant yeast Kluyveromyces marxianus	5
Era, a GTPase-like protein of the Ras family, does not control ribosome assembly in Mycobacterium tuberculosis	5

Reconstructing electron transfer components from an Fe(II) oxidizing bacterium	5
Clostridioides difficile spores tolerate disinfection with sodium hypochlorite disinfectant and remain viable within surgical scrubs and gown fabrics	5
Microbe Profile: Ruminococcus gnavus: the yin and yang of human gut symbionts	5
The primary transcriptome of hormogonia from a filamentous cyanobacterium defined by cappable-seq	5
d-Serine induces distinct transcriptomes in diverse Escherichia coli pathotypes	5
AadT, a new weapon in Acinetobacter’s fight against antibiotics	5
Under conditions closely mimicking vaginal fluid, Lactobacillus jensenii strain 62B produces a bacteriocin-like inhibitory substance that targets and eliminates Gardnerella species	5
Idification and structural characterisation of a catecholate-type siderophore produced by Stenotrophomonas maltophilia K279a	5
Acute polymicrobial airway infections: analysis in cystic fibrosis mice	5
The putative phosphate transporter PitB (PP1373) is involved in tellurite uptake in Pseudomonas putida KT2440	5
Mutation bias and adaptation in bacteria	5
Using the Galleria mellonella burn wound and infection model to identify and characterize potential wound probiotics	5
Predatory bacteria in the haemolymph of the cultured spiny lobster Panulirus ornatus	5
Removal of AMR plasmids using a mobile, broad host-range CRISPR-Cas9 delivery tool	5
Evolution of cyclic di-GMP signalling on a short and long term time scale	5
Clostridioides difficile infection: traversing host–pathogen interactions in the gut	5
Adaptation of Pseudomonas aeruginosa biofilms to tobramycin and the quorum sensing inhibitor C-30 during experimental evolution requires multiple genotypic and phenotypic changes	5
Human serum induces daptomycin tolerance in Enterococcus faecalis and viridans group streptococci	5
Interbacterial competition mediated by the type VIIb secretion system	5
Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli	5
T-DNA insertion mutagenesis in Penicillium brocae results in identification of an enolase gene mutant impaired in secretion of organic acids and phosphate solubilization	5
Before you go: a packing list for portable DNA sequencing of microbiomes and metagenomes	4
Microbe Profile: Aquifex aeolicus: an extreme heat-loving bacterium that feeds on gases and inorganic chemicals	4
The DNA relaxation-dependent OFF-to-ON biasing of the type 1 fimbrial genetic switch requires the Fis nucleoid-associated protein	4
Sweet and sour synergy: exploring the antibacterial and antibiofilm activity of acetic acid and vinegar combined with medical-grade honeys	4
PBP4 and PBP5 are involved in regulating exopolysaccharide synthesis during Escherichia coli biofilm formation	4
Microbe Profile: Pectobacterium atrosepticum: an enemy at the door	4
Current understandings of colibactin regulation	4
Direct visualization of sequence-specific DNA binding by gonococcal type IV pili	4
Deletion of FRT-sites by no-SCAR recombineering in Escherichia coli	4
Flagellin O-linked glycans are required for the interactions between Campylobacter jejuni and Acanthamoebae castellanii	4
Cell wall deficiency – an alternate bacterial lifestyle?	4
Extended genomic analyses of the broad-host-range phages vB_KmiM-2Di and vB_KmiM-4Dii reveal slopekviruses have highly conserved genomes	4
A highly sensitive biosensor with a single-copy evolved sensing cassette for chlorpyrifos pesticide detection	4
The methylation-independent mismatch repair machinery in Pseudomonas aeruginosa	4
Genomic characterization of the antiviral arsenal of Actinobacteria	4
Stress response modulation: the key to survival of pathogenic and spoilage bacteria during poultry processing	4
Iron influences the expression of colonization factor CS6 of enterotoxigenic Escherichia coli	4
Influence of tissue and geographic locality on culturable endophytic bacteria of Atractylodes macrocephala	4
Redefining soil health	4
How Microbiology started	4
Microbial Primer: The logic of bacterial plasmids	4
Detection of cytosine methylation in Burkholderia cenocepacia by single-molecule real-time sequencing and whole-genome bisulfite sequencing	4
Transcriptional profiling of Pseudomonas aeruginosa mature single- and dual-species biofilms in response to meropenem	4
Cholesterol-dependent activity of dapsone against non-replicating persistent mycobacteria	4
Development of a long-read next generation sequencing workflow for improved characterization of fastidious respiratory mycoplasmas	4
Integrating perspectives in actinomycete research: an ActinoBase review of 2020–21	4
Mining indigenous honeybee gut microbiota for Lactobacillus with probiotic potential	4
Transcriptional organization and regulation of the Pseudomonas putida K1 type VI secretion system gene cluster	4
The ARC2 response in Streptomcyes coelicolor requires the global regulatory genes afsR and afsS	4
Poly (acetyl, arginyl) glucosamine disrupts Pseudomonas aeruginosa biofilms and enhances bacterial clearance in a rat lung infection model	4
Microbe Profile: Salinispora tropica: natural products and the evolution of a unique marine bacterium	4
The inhibitory effect of paeoniflorin on reactive oxygen species alleviates the activation of NF-κB and MAPK signalling pathways in macrophages	3
The role of phenylalanine hydroxylase in lipogenesis in the oleaginous fungus Mortierella alpina	3
Evaluation of distinct molecular architectures and coordinated regulation of the catabolic pathways of oestrogenic dioctyl phthalate isomers in Gordonia sp.	3
Looking through the FOG: microbiome characterization and lipolytic bacteria isolation from a fatberg site	3
Topology of the Shigella flexneri Enterobacterial Common Antigen polymerase WzyE	3
Transcriptional regulation of the mtrCDE efflux pump operon: importance for Neisseria gonorrhoeae antimicrobial resistance	3
Evaluation of developing maize microbiomes and associations among nitrogen cyclers and key fungal taxa	3
A systems approach to decipher a role of transcription factor RegX3 in the adaptation of Mycobacterium tuberculosis to hypoxic stress	3
Nudix proteins affecting microbial pathogenesis	3
Assay development and inhibition of the Mt-DprE2 essential reductase from Mycobacterium tuberculosis	3
Mapping direct and indirect MarA/SoxS/Rob/RamA regulons in Salmonella Typhimurium reveals repression of csgD and biofilm formation	3
Corynebacterium phoceense, resident member of the urogenital microbiota?	3
The serotype a-EmaA adhesin of Aggregatibacter actinomycetemcomitans does not require O-PS synthesis for collagen binding activity	3
Pseudomonas aeruginosa LasR overexpression leads to a RsaL-independent pyocyanin production inhibition in a low phosphate condition	3
Microbe Profile: Euglena gracilis: photogenic, flexible and hardy	3
The identification of Pseudomonas aeruginosa persisters using flow cytometry	3
The putative role of the epipeptide EpeX in Bacillus subtilis intra-species competition	3
Vfr or CyaB promote the expression of the pore-forming toxin exlBA operon in Pseudomonas aeruginosa ATCC 9027 without increasing its virulence in mice	3
Optimization of the decolorization conditions of Rose Bengal by using Aspergillus niger TF05 and a decolorization mechanism	3
Microbial Primer: LuxR-LuxI Quorum Sensing	3
An assessment of the airborne longevity of group A Streptococcus	3
Characterization of a TatA/TatB binding site on the TatC component of the Escherichia coli twin arginine translocase	3
P-type ATPase zinc transporter Rv3270 of Mycobacterium tuberculosis enhances multi-drug efflux activity	3
Growth rate and nutrient limitation as key drivers of extracellular quorum sensing signal molecule accumulation in Pseudomonas aeruginosa	3
The anti-virulence activity of the non-mevalonate pathway inhibitor FR900098 towards Burkholderia cenocepacia is maintained during experimental evolution	3
Two regulatory factors of Vibrio cholerae activating the mannose-sensitive haemagglutinin pilus expression is important for biofilm formation and colonization in mice	3
Decolonizing drug-resistant E. coli with phage and probiotics: breaking the frequency-dependent dominance of residents	3
Mycobacteriophage D29 induced association of Mycobacterial RNA polymerase with ancillary factors leads to increased transcriptional activity	3
Testing for the fitness benefits of natural transformation during community-embedded evolution	3
Lox’d in translation: contradictions in the nomenclature surrounding common lox-site mutants and their implications in experiments	3
Genotyping and differential bacterial inhibition of Batrachochytrium dendrobatidis in threatened amphibians in Costa Rica	3
Investigating the Streptococcus sinensis competence regulon through a combination of transcriptome analysis and phenotypic evaluation	3
Halobacterium salinarum: Life with more than a grain of salt	3
Genetic and environmental determinants of surface adaptations in Pseudomonas aeruginosa	3
An efficient CRISPR interference-based prediction method for synergistic/additive effects of novel combinations of anti-tuberculosis drugs	3
A paean to the ineffable Marjory Stephenson	3
4′-Deoxypyridoxine disrupts vitamin B6 homeostasis in Escherichia coli K12 through combined inhibition of cumulative B6 uptake and PLP-dependent enzyme activity	3
Cytotoxicity of the 42 kDa SMase C sphingomyelinase secreted by Leptospira interrogans serovar Pomona on Vero cells	3
Accessory microbiomes	3
Cultivating antimicrobial resistance: how intensive agriculture ploughs the way for antibiotic resistance	3
A large chromosomal inversion affects antimicrobial sensitivity of Escherichia coli to sodium deoxycholate	3
A trimodular family 16 glycoside hydrolase from the cellulosome of Ruminococcus flavefaciens displays highly specific licheninase (EC 3.2.1.73) activity	3
Microbe Profile: Wigglesworthia glossinidia: the tsetse fly’s significant other	3