DNA Research

Papers
(The median citation count of DNA Research is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Chromosome-level genome assembly of the medicinal insect Blaps rhynchopetera using Nanopore and Hi-C technologies117
Chromosomal-level genome assembly of the orchid tree Bauhinia variegata (Leguminosae; Cercidoideae) supports the allotetraploid origin hypothesis of Bauhinia39
Comparative genomics of native plasmids from plant pathogenic Gammaproteobacteria29
Near-complete telomere-to-telomere de novo genome assembly in Egyptian clover (Trifolium alexandrinum)28
A chromosome-level genome assembly of the pollinating fig wasp Valisia javana27
A haplotype-resolved reference genome of a long-distance migratory bat, Pipistrellus nathusii (Keyserling & Blasius, 1839)24
The haplotype-phased genome assembly facilitated the deciphering of the bud dormancy-related QTLs in Prunus mume22
Genome assembly of the pioneer speciesPlantago majorL. (Plantaginaceae) provides insight into its global distribution and adaptation to metal-contaminated soil20
Functional landscape of genome-wide postzygotic somatic mutations between monozygotic twins20
Hybrid de novo genome assembly of the sexually dimorphic Lady Amherst’s pheasant18
Characterization of transcriptome changes in saline stress adaptation on Leuciscus merzbacheri using PacBio Iso-Seq and RNA-Seq18
The chromosome-scale genome of Kobresia myosuroides sheds light on karyotype evolution and recent diversification of a dominant herb group on the Qinghai-Tibet Plateau18
Genome assembly of Genji firefly (Nipponoluciola cruciata) reveals novel luciferase-like luminescent proteins without peroxisome targeting signal18
De novowhole-genome assembly in an interspecific hybrid table grape, ‘Shine Muscat’17
Chromosome-level genome assembly and annotation of the black sea urchin Arbacia lixula (Linnaeus, 1758)17
The methanogen core and pangenome: conservation and variability across biology’s growth temperature extremes17
Improved assembly and annotation of the sesame genome17
Genome analysis of five recently described species of the CUG-Ser clade uncoversCandida theaeas a new hybrid lineage with pathogenic potential in theCandida parapsilosisspecies complex16
Genome and transcriptome analyses reveal genes involved in the formation of fine ridges on petal epidermal cells in Hibiscus trionum16
Transcriptomes and DNA methylomes in apomictic cells delineate nucellar embryogenesis initiation in citrus16
Chromosome-level assembly, annotation and phylome of Pelobates cultripes, the western spadefoot toad15
Draft genome sequence and tissue expression panel of Pacific saury (Cololabis saira)15
Genome-wide identification and characterization of Fur-binding sites in the cyanobacteria Synechocystis sp. PCC 6803 and PCC 671414
The burst of satellite DNA in Leptidea wood white butterflies and their putative role in karyotype evolution14
Chromosome-scale assembly of barley cv. ‘Haruna Nijo’ as a resource for barley genetics14
The genome sequence and demographic history of Przewalskia tangutica (Solanaceae), an endangered alpine plant on the Qinghai–Tibet Plateau14
Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome13
Chromosomal DNA sequences of the Pacific saury genome: versatile resources for fishery science and comparative biology13
Unravelling the genomic features, phylogeny and genetic basis of tooth ontogenesis in Characiformes through analysis of four genomes13
Chromosome-level genome assembly of Pontederia cordata L. provides insights into its rapid adaptation and variation of flower colours13
Mituru Takanami, 1929–202213
Chromosome-level genome of a leaf vegetableGlebionis coronariaprovides insights into the biosynthesis of monoterpenoids contributing to its special aroma13
Long-read metagenomics of multiple displacement amplified DNA of low-biomass human gut phageomes by SACRA pre-processing chimeric reads12
Genome sequencing and analysis of two early-flowering cherry (Cerasus × kanzakura) varieties, ‘Kawazu-zakura’ and ‘Atami-zakura’11
Characterization of proteogenomic signatures of differentiation of CD4+ T cell subsets11
Integrating a genome-wide association study with transcriptomic data to predict candidate genes and favourable haplotypes influencing Brassica napus seed phytate11
Population genetic analysis based on the polymorphisms mediated by transposons in the genomes of pig10
Inventory of ATP-binding cassette proteins inLithospermum erythrorhizonas a model plant producing divergent secondary metabolites9
Genome assembly and transcriptomic analyses of the repeatedly rejuvenating jellyfish Turritopsis dohrnii9
Chromosome-level genome assembly of Lilford’s wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain)9
The genome ofLyophyllum shimejiprovides insight into the initial evolution of ectomycorrhizal fungal genomes9
Chromosome-level genome assembly of Phrynocephalus forsythii using third-generation DNA sequencing and Hi-C analysis9
Genome analysis of Candida subhashii reveals its hybrid nature and dual mitochondrial genome conformations8
Chromosome-scale haplotype-phased genome assemblies of the male and female lines of wild asparagus (Asparagus kiusianus), a dioecious plant species8
Chromosome-scale genome assembly of acerola (Malpighia emarginata DC.)7
The complete mitogenome assemblies of 10 diploid potato clones reveal recombination and overlapping variants7
Assessing genetic diversity and geographical differentiation in a global collection of wild soybean (Glycine soja Sieb. et Zucc.) and assigning a mini-core collection7
Whole-genome sequencing and analysis of two azaleas, Rhododendron ripense and Rhododendron kiyosumense7
Genome assembly of the temporary socially parasitic spiny ant Polyrhachis lamellidens and its host Camponotus japonicus6
Chromosome-level genome assembly and demographic history of Euryodendron excelsum in monotypic genus endemic to China6
Chromosome-level genome assembly of the endangered plant Tetraena mongolica6
GINGER: an integrated method for high-accuracy prediction of gene structure in higher eukaryotes at the gene and exon level6
Chromosome-level genome assembly of Japanese chestnut (Castanea crenata Sieb. et Zucc.) reveals conserved chromosomal segments in woody rosids6
Churros: a Docker-based pipeline for large-scale epigenomic analysis5
A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.)5
Epigenetic control of tetrapyrrole biosynthesis by m4C DNA methylation in a cyanobacterium5
Self-grafting-induced epigenetic changes leading to drought stress tolerance in tomato plants5
Genomic characterization of four novel bacteriophages infecting the clinical pathogen Klebsiella pneumoniae5
Universal Surface Biotinylation: a simple, versatile and cost-effective sample multiplexing method for single-cell RNA-seq analysis5
Chromosome-level genome of butterflyfish unveils genomic features of unique colour patterns and morphological traits5
A fully phased, chromosome-scale genome of sugar beet line FC309 enables the discovery of Fusarium yellows resistance QTL5
Telomere-to-telomere genome assembly of an allotetraploid pernicious weed, Echinochloa phyllopogon5
Detection of tandem repeats in the Capsicum annuum genome5
Chromosome-level genome assembly of an endangered plant Prunus mongolica using PacBio and Hi-C technologies5
MIG-seq is an effective method for high-throughput genotyping in wheat (Triticum spp.)5
Evolution of the viral genomes of SARS-CoV-2 in association with the changes in local condition: a genomic epidemiological study of a suburban city of Japan4
Correction to: Mituru Takanami, 1929–20224
The genome of a globally invasive passerine, the common myna, Acridotheres tristis4
A high-quality chromosome-level genome of wild Rosa rugosa3
Assessment of metagenomic workflows using a newly constructed human gut microbiome mock community3
A chromosomal-scale reference genome of the New World Screwworm,Cochliomyia hominivorax3
Spatial and single-cell transcriptome analysis reveals changes in gene expression in response to drug perturbation in rat kidney3
Chromosome-level genome assembly of the yeast Lodderomyces beijingensis reveals the genetic nature of metabolic adaptations and identifies subtelomeres as hotspots for amplification of mating t3
Propagation path of a flowering cherry (Cerasus × yedoensis) cultivar ‘Somei-Yoshino’ traced by somatic mutations3
Genome-wide simple sequence repeat markers in potato: abundance, distribution, composition, and polymorphism3
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