OOIR: Observatory of International Research

Papers

(The TQCC of Journal of Applied Genetics is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)

Article	Citations
Strigolactone insensitivity affects differential shoot and root transcriptome in barley	26
Genetic and genomic characterization followed by single-step genomic evaluation of withers height in German Warmblood horses	22
Antibiotic resistance and its correlation with biofilm formation and virulence genes in Klebsiella pneumoniae isolated from wounds	18
A simple and unified protocol to purify all seven Escherichia coli RNA polymerase sigma factors	16
In search of the relationship between the rye polyamine oxidase (PAO) gene and resistance to powdery mildew (PM)	16
Genetic diversity and population structure of Uganda cassava germplasm	14
Experimental and in silico analysis of LINC01279 expression in tumor of patients with breast cancer	14
Genetic diversity and selection signatures in sheep breeds	14
Complementarity of biomarker screening and genetic analyses based on the case of an attenuated multiple sulfatase deficiency	13
Circular RNA circ_0000119 promotes cervical cancer cell growth and migration via miR-433-3p/PAK2 axis	13
Mutations within gene XNR_2147 for TetR-like protein enhance lincomycin resistance and endogenous specialized metabolism of Streptomyces albus J1074	12
MicroRNA in lung cancer—a novel potential way for early diagnosis and therapy	12
Genome-wide characterization of carotenoid oxygenase gene family in three cotton species and functional identification of GaNCED3 in drought and salt stress	12
Spinocerebellar ataxia 27B (SCA27B)—a systematic review and a case report of a Polish family	12
Commentary on “Poor evidence for host-dependent regular RNA editing in the transcriptome of SARS-CoV-2”	12
Genetic analysis of novel resistance sources and genome-wide association mapping identified novel QTLs for resistance to Zymoseptoria tritici, the causal agent of septoria tritici blotch in wheat	12
Field response and molecular screening of European wheat germplasm against powdery mildew at the Himalayan region of Pakistan	11
Uncovering the role of aquaporin and chromobox family members as potential biomarkers in head and neck squamous cell carcinoma via integrative multiomics and in silico approach	11
Correction to: Diallel analysis of common bean (Phaseolus vulgaris L.) genotypes for seed dietary fibre, carbohydrate, calcium and phosphorus contents	11
High expression of ACKR1 predicts a good prognosis and suppresses sarcoma cell progression via regulating the tumor immune microenvironment	11
Unjustly forgotten scientist Wacław Mayzel (1847–1916)—co-discoverer of somatic mitosis	11
Telomere length variation does not correspond with the growth disturbances in the rainbow trout (Oncorhynchus mykiss)	10
Bioherbicidal potential of Bacillus altitudinis D30202 on Avena fatua L.: a whole-genome sequencing analysis	9
Heritability of chronic thermal tolerance and genetic correlations with growth traits in the Pacific oyster (Crassostrea gigas)	9
Discrimination of hospital isolates of Acinetobacter baumannii using repeated sequences and whole genome alignment differential analysis	9

Identification of novel biallelic mutations in CFAP53 associated with fetal situs inversus totalis and literature review	9
Polymorphic insertions of DcSto miniature inverted-repeat transposable elements reveal genetic diversity structure within the cultivated carrot	9
Deciphering early responsive signature genes in rice blast disease: an integrated temporal transcriptomic study	9
Structure and functions of a multireplicon genome of Antarctic Psychrobacter sp. ANT_H3: characterization of the genetic modules suitable for the construction of the plasmid-vectors for cold-active ba	9
Identifying key genes and functionally enriched pathways in acute myeloid leukemia by weighted gene co-expression network analysis	8
Up-regulated mRNA expression of VEGFA receptors (FLT1 and KDR) in placentas after assisted reproductive technology fertilization	8
Association of ACE and AGTR1 variants with retinopathy of prematurity: a case–control study and meta-analysis	8
TGFα-EGFR pathway in breast carcinogenesis, association with WWOX expression and estrogen activation	8
Identification of trait-associated microRNA modules in liver transcriptome of pig fed with PUFAs-enriched supplementary diet	7
Identification of potential biomarkers for melanoma cancer (black tumor) using bioinformatics strategy: a study based on GEO and SRA datasets	7
Correction to: Complete chloroplast genome sequence of Camellia sinensis: genome structure, adaptive evolution, and phylogenetic relationships	7
Investigation of the biofilm formation in extra-intestinal pathogenic Escherichia coli ST131 strains and its correlation with the presence of fimH, afa, and kpsMSTII genes	7
Bioinformatics screening of prognostic immune-related genes in renal clear cell carcinoma	7
Genetic analysis of purple pigmentation in rice seed and vegetative parts — implications on developing high-yielding purple rice (Oryza sativa L.)	7
QTL mapping for adult plant resistance to wheat stripe rust in M96-5 × Guixie 3 wheat population	7
What, how, and why? – anti-EHEC phages and their application potential in medicine and food industry	6
Rare T-box variants in adult pulmonary arterial hypertension with congenital heart disease	6
Correction to: Anthropometric characteristics of 65 Polish Smith-Lemli-Opitz patients	6
Detection of candidate gene networks involved in resistance to Sclerotinia sclerotiorum in soybean	6
Exploring genomic inbreeding and selection signatures in a commercial Brangus herd through functional annotation	6
NADPH oxidase 4-mediating oxidative stress contributes to endometriosis	6
From cytogenetics to cytogenomics: a new era in the diagnosis of chromosomal abnormalities in domestic animals	6
Oat species and interspecific amphiploids show predominance of diploid nuclei in the syncytial endosperm	6
Variants of the CASP9 gene as candidate markers for primary response to anti-TNF therapy in Crohn’s disease patients	6
Comprehensive bioinformatics analysis reveals the oncogenic role of FoxM1 and its impact on prognosis, immune microenvironment, and drug sensitivity in osteosarcoma	6
Giardia fibrillarin: a bioinformatics exploration of sequence and structure	5
Application of a custom NGS gene panel revealed a high diagnostic utility for molecular testing of hereditary ataxias	5
Identification of quantitative trait loci for in vitro plant regeneration from leaf microexplants in cucumber (Cucumis sativus L.)	5
Separating gene clustering in the rare mucopolysaccharidosis disease	5
Blood-based microRNA profiling unveils complex molecular dynamics in breast cancer	5
Bioinformatics to analyze the differentially expressed genes in different degrees of Alzheimer’s disease and their roles in progress of the disease	5
Single-cell integrated transcriptomics reveals the role of keratinocytes in head and neck squamous cell carcinoma	5
DNA ligase IV mutations confer shorter lifespan and increased sensitivity to nutrient stress in Drosophila melanogaster	5
Oligogenic risk score for Gilles de la Tourette syndrome reveals a genetic continuum of tic disorders	5
Integration of genome-wide association studies reveal loci associated with salt tolerance score of rice at the seedling stage	4
The effect of library preparation protocol on the efficiency of heteroplasmy detection in mitochondrial DNA using two massively parallel sequencing Illumina systems	4
Novel FOXP2 variant associated with speech and language dysfunction in a Chinese family and literature review	4
Urofacial (Ochoa) syndrome with a founder pathogenic variant in the HPSE2 gene: a case report and mutation origin	4
Effect of copper and silver ions on sequence and DNA methylation changes in triticale regenerants gained via somatic embryogenesis	4
Transcriptome profiling and metabolic pathway analysis towards reliable biomarker discovery in early-stage lung cancer	4
RNA-Seq transcriptome profiling of Nile rat livers reveals novel insights on the anti-diabetic mechanisms of Water-Soluble Palm Fruit Extract	4
Epidemiology of Streptococcus pyogenes upper respiratory tract infections in Poland (2003–2017)	4
Development of novel gene-based markers for waxy1 gene and their validation for exploitation in molecular breeding for enhancement of amylopectin in maize	4
Discovery of genomic regions associated with resistance to late wilt disease caused by Harpophora maydis (Samra, Sabet and Hing) in maize (Zea mays L.)	4
Genome-wide identification and characterization of glutathione S-transferase gene family in Musa acuminata L. AAA group and gaining an insight to their role in banana fruit development	4
Review of applications of artificial intelligence (AI) methods in crop research	4
Application of OpenArray RT-qPCR for identification of microRNA expression signatures of lower extremity artery disease	4
Using machine learning and partial dependence to evaluate robustness of best linear unbiased prediction (BLUP) for phenotypic values	4
The mitogenomes characterization of two Peltigera species (Peltigera elisabethae and Peltigera polydactylon) and comparative mitogenomic analyses of six Peltigera	4
Genetic variation of Cerastium alpinum L. from Babia Góra, a critically endangered species in Poland	4

GGE biplot analysis for cane yield and sugar yield in advanced clones of sugarcane (Saccharum sp. complex)	4
Identification of eQTLs and differential gene expression associated with fetal programming in beef cattle	4
Identification of Laportea bulbifera using the complete chloroplast genome as a potentially effective super-barcode	4
The genetic basis of cold tolerance in cucumber (Cucumis sativus L.)—the latest developments and perspectives	4
Integrative multiomics and weighted network approach reveals the prognostic role of RPS7 in lung squamous cell carcinoma pathogenesis	4
Comparative transcriptome and adaptive evolution analysis on the main liver and attaching liver of Pareuchiloglanis macrotrema	3
Genomic Profiling Reveals Immune-Related Gene Differences in Lung Cancer Patients Stratified by PD1/PDL1 Expression: Implications for Immunotherapy Efficacy	3
Congenital coenzyme Q5-linked pathology: causal genetic association, core phenotype, and molecular mechanism	3
Discovery of core genes and intercellular communication role in osteosarcoma	3
Molecular identification of triticale introgression lines carrying leaf rust resistance genes transferred from Aegilops kotschyi Boiss. and Ae. tauschii Coss	3
FGFR3 and FGFR4 overexpression in juvenile nasopharyngeal angiofibroma: impact of smoking history and implications for personalized management	3
Anthropogenic hybridization and its influence on the adaptive potential of the Sardinian wild boar (Sus scrofa meridionalis)	3
Correction to: Telomere length variation does not correspond with the growth disturbances in the rainbow trout (Oncorhynchus mykiss)	3
Long non-coding RNA variability in porcine skeletal muscle	3
QTL mapping of Fusarium ear rot resistance using genotyping by target sequencing (GBTS) in maize	3
Gene therapy as an innovative approach to the treatment of hemophilia B—a review	3
Exploring microRNA signatures in pediatric non-infectious uveitis: meta-analysis and molecular profiling of patient samples	3
Correction to: Unjustly forgotten scientist Wacław Mayzel (1847–1916)—co‑discoverer of somatic mitosis	3
ZNF26-Associated Genes as Prognostic Signatures in Colorectal Cancer with Broad Therapeutic Implications	3
Diversity of genome size, endopolyploidy and SCoT markers in 20 Trigonella (Fabaceae) species	3