OOIR: Observatory of International Research

Papers

(The TQCC of Journal of Applied Genetics is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-02-01 to 2025-02-01.)

Article	Citations
Novel and recurrent genetic variants associated with male and female infertility	32
Molecular selection of soybean towards adaptation to Central European agroclimatic conditions	21
Bioinformatics to analyze the differentially expressed genes in different degrees of Alzheimer’s disease and their roles in progress of the disease	20
Strigolactone insensitivity affects differential shoot and root transcriptome in barley	19
Modulation of gene expression in immune-related organs by in ovo stimulation with probiotics and prophybiotics in broiler chickens	17
Giardia fibrillarin: a bioinformatics exploration of sequence and structure	15
Expression gradient of metalloproteinases and their inhibitors from proximal to distal segments of abdominal aortic aneurysm	14
Non-mosaic X monosomy (77,X) in a female dog with signs of virilization	13
Albert de la Chapelle—pro memoriam	13
An explanation for the decreased severity of liver malfunction in Niemann-Pick C1 disease with age	12
lncRNA MIAT promotes luminal B breast cancer cell proliferation, migration, and invasion in vitro	12
Genomic study of the resilience of buffalo cows to a negative energy balance	12
The use of weighted multiple linear regression to estimate QTL × QTL × QTL interaction effects of winter wheat (Triticum aestivum L.) doubled-haploid lines	12
High molecular risk variants, severe thrombocytopenia and large unstained cells count affect the outcome in primary myelofibrosis	11
Experimental and in silico analysis of LINC01279 expression in tumor of patients with breast cancer	10
The effects of heading time on yield performance and HvGAMYB expression in spring barley subjected to drought	10
Mutagenic strategies against luxS gene affect the early stage of biofilm formation of Campylobacter jejuni	10
Profiling mRNA and miRNA expression variations associated with cyclin-dependent kinase pathway in the low-grade luminal early breast cancer	10
DNA ligase IV mutations confer shorter lifespan and increased sensitivity to nutrient stress in Drosophila melanogaster	10
Clustered and dispersed chromosomal distribution of the two classes of Revolver transposon family in rye (Secale cereale)	10
Assessment of natural DNA methylation variation and its association with economically important traits in dolichos bean (Lablab purpureus L. Var. Lignosus) using AMP-PCR assay	9
Genetic analysis of novel resistance sources and genome-wide association mapping identified novel QTLs for resistance to Zymoseptoria tritici, the causal agent of septoria tritici blotch in wheat	9
GGE biplot analysis for cane yield and sugar yield in advanced clones of sugarcane (Saccharum sp. complex)	9
Effect of thermal conditioning on serum electrolytes, metabolites, corticosterone and expression of CRH gene in selected chicken strains	8
Occurrence of mammary gland tumours in male dogs and its weak association with development of testicular tumours: a review	8

Genetic diversity and inter-gene pool introgression of Mesoamerican Diversity Panel in common beans	8
In search of the relationship between the rye polyamine oxidase (PAO) gene and resistance to powdery mildew (PM)	8
Genetic implications of PSMA expression variability in breast cancer subtypes with a focus on triple-negative breast cancer	7
Effect of miR-10a on the proliferation and differentiation of yak adipocyte precursors	7
Application of a custom NGS gene panel revealed a high diagnostic utility for molecular testing of hereditary ataxias	7
Genetic and genomic characterization followed by single-step genomic evaluation of withers height in German Warmblood horses	7
A simple and unified protocol to purify all seven Escherichia coli RNA polymerase sigma factors	7
Genetic testing—whether to allow complete freedom? Direct to consumer tests versus genetic tests for medical purposes	7
Portuguese wild hop diversity assessment by fast SNP genotyping using high-resolution melting	7
Identification of quantitative trait loci for in vitro plant regeneration from leaf microexplants in cucumber (Cucumis sativus L.)	7
Genome properties of key oil palm (Elaeis guineensis Jacq.) breeding populations	7
Genetic basis of some physiological traits and yield in early and late sowing conditions in bread wheat (Triticum aestivum L.)	6
Comparative genome analysis of endophytic Bacillus amyloliquefaciens MR4: a potential biocontrol agent isolated from wild medicinal plant root tissue	6
Misdiagnosis in mucopolysaccharidoses	6
Genome size and gas chromatography-mass spectrometry (GC–MS) analysis of field-grown and in vitro regenerated Pluchea lanceolata plants	6
Genetic diversity and population structure analysis for morphological traits in upland cotton (Gossypium hirsutum L.)	6
Genetic diversity and population structure of Uganda cassava germplasm	6
Circular RNA circ_0000119 promotes cervical cancer cell growth and migration via miR-433-3p/PAK2 axis	6
Transcriptome meta-analysis-based identification of hub transcription factors and RNA-binding proteins potentially orchestrating gene regulatory cascades and crosstalk in response to abiotic stresses	6
Peptidylprolyl isomerase D circular RNA sensitizes breast cancer to trastuzumab through remodeling HER2 N4-acetylcytidine modification	6
Genetic and molecular mechanisms underlying the male sterility in rice	5
Molecular characterization of doublesex and Mab-3 (DMRT) gene family in Ctenopharyngodon idella (grass carp)	5
Development and longitudinal neurocognitive functioning in mucopolysaccharidosis type IIIC: a case study	5
Prognostic biomarker MICAL2 and associates with proliferation, migration and immune infiltration in pancreatic adenocarcinoma	5
Novel DNA methylation biomarkers for early diagnosis of oral tongue squamous cell carcinoma (OTSCC)	5
Complementarity of biomarker screening and genetic analyses based on the case of an attenuated multiple sulfatase deficiency	5
Unraveling the genetic diversity, population structure, and stability for yield-related traits of rice genotypes in mid-hills of northeastern India	5
Genome-wide post-transcriptional regulation of bovine mammary gland response to Streptococcus uberis	5
Antibiotic resistance and its correlation with biofilm formation and virulence genes in Klebsiella pneumoniae isolated from wounds	5
A mis-splicing early flowering 3 (elf3) allele of lentil is associated with yield enhancement under terminal heat stress	5
Correction to: Unraveling the genetic basis of MODY: insights from next‑generation sequencing	4
Genetic diversity and selection signatures in sheep breeds	4
Autosomal recessive diseases among the Athabaskans of the southwestern United States: anthropological, medical, and scientific aspects	4
Complex effects of the exo-xis region of the Shiga toxin-converting bacteriophage Φ24B genome on the phage development and the Escherichia coli host physiology	4
Blood-based microRNA profiling unveils complex molecular dynamics in breast cancer	4
Discovery of genomic regions associated with resistance to late wilt disease caused by Harpophora maydis (Samra, Sabet and Hing) in maize (Zea mays L.)	4
High expression of ACKR1 predicts a good prognosis and suppresses sarcoma cell progression via regulating the tumor immune microenvironment	4
Review of applications of artificial intelligence (AI) methods in crop research	4
Oligogenic risk score for Gilles de la Tourette syndrome reveals a genetic continuum of tic disorders	4
Novel FOXP2 variant associated with speech and language dysfunction in a Chinese family and literature review	4
Chloroplast genome of Justicia procumbens: genomic features, comparative analysis, and phylogenetic relationships among Justicieae species	4
Influence of coat color on genetic parameter estimates in horses	3
Mutations within gene XNR_2147 for TetR-like protein enhance lincomycin resistance and endogenous specialized metabolism of Streptomyces albus J1074	3
Discrimination of hospital isolates of Acinetobacter baumannii using repeated sequences and whole genome alignment differential analysis	3
Genome-wide identification and characterization of glutathione S-transferase gene family in Musa acuminata L. AAA group and gaining an insight to their role in banana fruit development	3
Integration of genome-wide association studies reveal loci associated with salt tolerance score of rice at the seedling stage	3
Genetic variants of MTHFR gene in relation to folic acid levels and bone mineral density in Polish patients with inflammatory bowel disease	3
Genome-wide characterization of carotenoid oxygenase gene family in three cotton species and functional identification of GaNCED3 in drought and salt stress	3
HO-CR and HOLL-CR: new forms of winter oilseed rape (Brassica napus L.) with altered fatty acid composition and resistance to selected pathotypes of Plasmodiophora brassicae (clubroot)	3
Uncovering the role of aquaporin and chromobox family members as potential biomarkers in head and neck squamous cell carcinoma via integrative multiomics and in silico approach	3

Field response and molecular screening of European wheat germplasm against powdery mildew at the Himalayan region of Pakistan	3
Genetic variation of Cerastium alpinum L. from Babia Góra, a critically endangered species in Poland	3
A pure de novo 16p13.3 duplication and amplification in a patient with femoral hypoplasia, psychomotor retardation, heart defect, and facial dysmorphism—a case report and literature review of the part	3
Another lesson from unmapped reads: in-depth analysis of RNA-Seq reads from various horse tissues	3
The effect of library preparation protocol on the efficiency of heteroplasmy detection in mitochondrial DNA using two massively parallel sequencing Illumina systems	2
Identification of Laportea bulbifera using the complete chloroplast genome as a potentially effective super-barcode	2
Dog–human translational genomics: state of the art and genomic resources	2
Unjustly forgotten scientist Wacław Mayzel (1847–1916)—co-discoverer of somatic mitosis	2
Using machine learning and partial dependence to evaluate robustness of best linear unbiased prediction (BLUP) for phenotypic values	2
Retraction Note: A new DNA sequence entropy-based Kullback-Leibler algorithm for gene clustering	2
Antibiotic resistance, phylogenetic typing, and virulence genes profile analysis of uropathogenic Escherichia coli isolated from patients in southern Iraq	2
Development of novel gene-based markers for waxy1 gene and their validation for exploitation in molecular breeding for enhancement of amylopectin in maize	2
Genome-wide identification and expression analysis of the MADS-box transcription factor family in Camellia sinensis	2
A simple sexing test for elephant species and its application to faecal DNA	2
Correction to: Genome‑wide post‑transcriptional regulation of bovine mammary gland response to Streptococcus uberis	2
Correction to: Novel FOXP2 variant associated with speech and language dysfunction in a Chinese family and literature review	2
High amylopectin in waxy maize synergistically affects seed germination and seedling vigour over traditional maize genotypes	2
HPV-driven oncogenesis—much more than the E6 and E7 oncoproteins	2
Epidemiology of Streptococcus pyogenes upper respiratory tract infections in Poland (2003–2017)	2
Commentary on “Poor evidence for host-dependent regular RNA editing in the transcriptome of SARS-CoV-2”	2
The efficacy and safety of SARS-CoV-2 vaccines mRNA1273 and BNT162b2 might be complicated by rampant C-to-U RNA editing	2
Bioherbicidal potential of Bacillus altitudinis D30202 on Avena fatua L.: a whole-genome sequencing analysis	2
Telomere length variation does not correspond with the growth disturbances in the rainbow trout (Oncorhynchus mykiss)	2
Urofacial (Ochoa) syndrome with a founder pathogenic variant in the HPSE2 gene: a case report and mutation origin	2
Effect of copper and silver ions on sequence and DNA methylation changes in triticale regenerants gained via somatic embryogenesis	2
Pharmacogenetic study of CES1 gene and enalapril efficacy	2
Assessing cytotoxicity and endoplasmic reticulum stress in human blood–brain barrier cells due to silver and copper oxide nanoparticles	2
Correction to: DNA methylation studies in cattle	2
In silico approach for the identification of tRNA-derived small non-coding RNAs in SARS-CoV infection	2
Correction to: The influence of Al3+ on DNA methylation and sequence changes in the triticale (× Triticosecale Wittmack) genome	2
MicroRNA in lung cancer—a novel potential way for early diagnosis and therapy	2
The mitogenomes characterization of two Peltigera species (Peltigera elisabethae and Peltigera polydactylon) and comparative mitogenomic analyses of six Peltigera	2
Correction to: Diallel analysis of common bean (Phaseolus vulgaris L.) genotypes for seed dietary fibre, carbohydrate, calcium and phosphorus contents	2
Development of a prognostic model for personalized prediction of colon adenocarcinoma (COAD) patient outcomes using methylation-driven genes	2
Structure and functions of a multireplicon genome of Antarctic Psychrobacter sp. ANT_H3: characterization of the genetic modules suitable for the construction of the plasmid-vectors for cold-active ba	2
Transcriptome profiling and metabolic pathway analysis towards reliable biomarker discovery in early-stage lung cancer	2
QTL analysis of seed germination traits in tobacco (Nicotiana tabacum L.)	2
Genome-wide identification and expression profiles of AP2/ERF transcription factor family in mung bean (Vigna radiata L.)	2
Integrative multiomics and weighted network approach reveals the prognostic role of RPS7 in lung squamous cell carcinoma pathogenesis	2
Identification of genes involved in the tomato root response to Globodera rostochiensis parasitism under varied light conditions	2
Correction to: Identification of significant marker‑trait associations for Fusarium wilt resistance in a genetically diverse core collection of safflower using AFLP and SSR markers	2
MiR-96-5p is an oncogene in lung adenocarcinoma and facilitates tumor progression through ARHGAP6 downregulation	2