OOIR: Observatory of International Research

Papers

(The TQCC of Journal of Applied Genetics is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-10-01 to 2024-10-01.)

Article	Citations
A GBS-based GWAS analysis of adaptability and yield traits in bread wheat (Triticum aestivum L.)	38
Development of multinutrient-rich biofortified sweet corn hybrids through genomics-assisted selection of shrunken2, opaque2, lcyE and crtRB1 genes	32
Cytotoxic and genotoxic assessment of tungsten oxide nanoparticles in Allium cepa cells by Allium ana-telophase and comet assays	21
Unveiling the putative functional genes present in root-associated endophytic microbiome from maize plant using the shotgun approach	21
Genome-wide identification and function characterization of GATA transcription factors during development and in response to abiotic stresses and hormone treatments in pepper	20
Poor evidence for host-dependent regular RNA editing in the transcriptome of SARS-CoV-2	19
Misdiagnosis in mucopolysaccharidoses	19
A GWAS to identify the cereal cyst nematode (Heterodera filipjevi) resistance loci in diverse wheat prebreeding lines	17
Commentary on “Poor evidence for host-dependent regular RNA editing in the transcriptome of SARS-CoV-2”	16
European context of the diversity and phylogenetic position of SARS-CoV-2 sequences from Polish COVID-19 patients	15
Identification of major QTL for waterlogging tolerance in maize using genome-wide association study and bulked sample analysis	15
Quantitative trait loci and candidate genes associated with freezing tolerance of winter triticale (× Triticosecale Wittmack)	14
Endemicity of OXA-23 and OXA-72 in clinical isolates of Acinetobacter baumannii from three neighbouring countries in Southeast Europe	13
Recent genetic advances on boar taint reduction as an alternative to castration: a review	13
Antibiotic resistance, phylogenetic typing, and virulence genes profile analysis of uropathogenic Escherichia coli isolated from patients in southern Iraq	13
A genome-wide association study for prolificacy in three Polish sheep breeds	13
Circulating miRNA as potential biomarkers for diabetes mellitus type 2: should we focus on searching for sex differences?	12
Genome size and gas chromatography-mass spectrometry (GC–MS) analysis of field-grown and in vitro regenerated Pluchea lanceolata plants	12
SARS-CoV-2 competes with host mRNAs for efficient translation by maintaining the mutations favorable for translation initiation	12
Mutation profiling of a limbless pig reveals genome-wide regulation of RNA processing related to bone development	11
Reconciling the debate on deamination on viral RNA	11
DNA methylation studies in cattle	10
High-resolution mapping of the quantitative trait locus (QTLs) conferring resistance to false smut disease in rice	10
MiR-96-5p is an oncogene in lung adenocarcinoma and facilitates tumor progression through ARHGAP6 downregulation	10
Old Catharanthus roseus culture (14 years) produced somatic embryos and plants and showed normal genome size; demonstrated an increased antioxidant defense mechanism; and synthesized stress proteins a	10

Direct somatic embryogenesis and flow cytometric assessment of ploidy stability in regenerants of Caladium × hortulanum ‘Fancy’	10
Genome-wide identification and characterization of Lectin receptor-like kinase (LecRLK) genes in mungbean (Vigna radiata L. Wilczek)	10
Further phenotypic delineation of the auriculocondylar syndrome type 2 with literature review	10
Genome-wide identification and expression analysis of the MADS-box transcription factor family in Camellia sinensis	10
QTL analysis of seed germination traits in tobacco (Nicotiana tabacum L.)	10
Enhancement of nutritional quality in maize kernel through marker-assisted breeding for vte4, crtRB1, and opaque2 genes	9
Transcriptome sequencing of wild soybean revealed gene expression dynamics under low nitrogen stress	9
RNA editing detection in SARS-CoV-2 transcriptome should be different from traditional SNV identification	9
Dog–human translational genomics: state of the art and genomic resources	9
Identification, genomic organization, and expression profiles of single C2H2 zinc finger transcription factors in tomato (Solanum lycopersicum)	8
MicroRNA signature in classical Hodgkin lymphoma	8
The genetic basis of cold tolerance in cucumber (Cucumis sativus L.)—the latest developments and perspectives	8
Genome-wide SSR markers in bottle gourd: development, characterization, utilization in assessment of genetic diversity of National Genebank of India and synteny with other related cucurbits	7
SERPINB2—its regulation and interplay with aryl hydrocarbon receptor	7
Genetic testing—whether to allow complete freedom? Direct to consumer tests versus genetic tests for medical purposes	7
Different response of perennial ryegrass—Epichloë endophyte symbiota to the elevated concentration of heavy metals in soil	7
Characterization of crtRB1- and vte4-based biofortified sweet corn inbreds for seed vigour and physico-biochemical traits	7
Genome-wide characterization of carotenoid oxygenase gene family in three cotton species and functional identification of GaNCED3 in drought and salt stress	7
Genetic diversity and population structure analysis for morphological traits in upland cotton (Gossypium hirsutum L.)	7
QTL mapping for adult plant resistance to wheat stripe rust in M96-5 × Guixie 3 wheat population	7
The basis of mink susceptibility to SARS-CoV-2 infection	7
Genome-wide identification and characterization of glutathione S-transferase gene family in Musa acuminata L. AAA group and gaining an insight to their role in banana fruit development	7
Complete chloroplast genome sequence of Camellia sinensis: genome structure, adaptive evolution, and phylogenetic relationships	6
Searching for new molecular markers for cells obtained from abdominal aortic aneurysm	6
In silico and in vitro analysis of the impact of single substitutions within EXO-motifs on Hsa-MiR-1246 intercellular transfer in breast cancer cell	6
Detection of candidate gene networks involved in resistance to Sclerotinia sclerotiorum in soybean	6
Genome-wide identification and expression analysis of glycosyltransferase gene family 1 in Quercus robur L.	6
Discovery of genomic regions associated with resistance to late wilt disease caused by Harpophora maydis (Samra, Sabet and Hing) in maize (Zea mays L.)	6
Pathogenic variants in plakophilin-2 gene (PKP2) are associated with better survival in arrhythmogenic right ventricular cardiomyopathy	6
Genetic mapping of adult-plant resistance genes to powdery mildew in triticale	6
Herbicide stress-induced DNA methylation changes in two Zea mays inbred lines differing in Roundup® resistance	6
Genetic analysis of novel resistance sources and genome-wide association mapping identified novel QTLs for resistance to Zymoseptoria tritici, the causal agent of septoria tritici blotch in wheat	6
The complete chloroplast genome of Secale sylvestre (Poaceae: Triticeae)	5
Molecular background of Leber congenital amaurosis in a Polish cohort of patients—novel variants discovered by NGS	5
Molecular diversity, haplotype distribution and genetic variation flow of Bipolaris sorokiniana fungus causing spot blotch disease in different wheat-growing zones	5
Small mutations in Duchenne/Becker muscular dystrophy in 164 unrelated Polish patients	5
Expression gradient of metalloproteinases and their inhibitors from proximal to distal segments of abdominal aortic aneurysm	5
Modern therapies of nonsmall cell lung cancer	5
Enhancement of undecylprodigiosin production from marine endophytic recombinant strain Streptomyces sp. ALAA-R20 through low-cost induction strategy	5
Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects	5
Influence of coat color on genetic parameter estimates in horses	5
Genome-wide post-transcriptional regulation of bovine mammary gland response to Streptococcus uberis	5
A 1.84-Mb region on rice chromosome 2 carrying SPL4, SPL5 and MLO8 genes is associated with higher yield under phosphorus-deficient acidic soil	5
Identification of significant marker-trait associations for Fusarium wilt resistance in a genetically diverse core collection of safflower using AFLP and SSR markers	5
Telomere length variation does not correspond with the growth disturbances in the rainbow trout (Oncorhynchus mykiss)	5
MicroRNA in lung cancer—a novel potential way for early diagnosis and therapy	5
Genome-wide identification and expression profiles of AP2/ERF transcription factor family in mung bean (Vigna radiata L.)	4
Application of a custom NGS gene panel revealed a high diagnostic utility for molecular testing of hereditary ataxias	4
Parentage-based tagging and parentage analyses of stocked sea trout in Vistula River commercial catches	4
Replacement of microsatellite markers by imputed medium-density SNP arrays for parentage control in German warmblood horses	4

Effect of copper and silver ions on sequence and DNA methylation changes in triticale regenerants gained via somatic embryogenesis	4
Portuguese wild hop diversity assessment by fast SNP genotyping using high-resolution melting	4
Genome-wide analysis of genetic predisposition to common polygenic cancers	4
A-to-I RNA editing shows dramatic up-regulation in osteosarcoma and broadly regulates tumor-related genes by altering microRNA target regions	4
A simple sexing test for elephant species and its application to faecal DNA	4
Mutagenic strategies against luxS gene affect the early stage of biofilm formation of Campylobacter jejuni	4
Triticale doubled haploid plant regeneration factors linked by structural equation modeling	4