Journal of Applied Genetics

Article	Citations
A GBS-based GWAS analysis of adaptability and yield traits in bread wheat (Triticum aestivum L.)	28
Development of multinutrient-rich biofortified sweet corn hybrids through genomics-assisted selection of shrunken2, opaque2, lcyE and crtRB1 genes	26
Unveiling the putative functional genes present in root-associated endophytic microbiome from maize plant using the shotgun approach	20
Poor evidence for host-dependent regular RNA editing in the transcriptome of SARS-CoV-2	19
Cytotoxic and genotoxic assessment of tungsten oxide nanoparticles in Allium cepa cells by Allium ana-telophase and comet assays	18
Genome-wide identification and function characterization of GATA transcription factors during development and in response to abiotic stresses and hormone treatments in pepper	17
A GWAS to identify the cereal cyst nematode (Heterodera filipjevi) resistance loci in diverse wheat prebreeding lines	17
Commentary on “Poor evidence for host-dependent regular RNA editing in the transcriptome of SARS-CoV-2”	16
Characterizing the fecal bacteria and archaea community of heifers and lactating cows through 16S rRNA next-generation sequencing	15
European context of the diversity and phylogenetic position of SARS-CoV-2 sequences from Polish COVID-19 patients	15
Identification of major QTL for waterlogging tolerance in maize using genome-wide association study and bulked sample analysis	15
Genome-wide identification, genomic organization and expression profiles of SlARR-B gene family in tomato	14
Genome-wide identification and expression analyses of nitrate transporter family genes in wild soybean (Glycine soja)	13
Quantitative trait loci and candidate genes associated with freezing tolerance of winter triticale (× Triticosecale Wittmack)	12
Antibiotic resistance, phylogenetic typing, and virulence genes profile analysis of uropathogenic Escherichia coli isolated from patients in southern Iraq	12
SARS-CoV-2 competes with host mRNAs for efficient translation by maintaining the mutations favorable for translation initiation	12
Misdiagnosis in mucopolysaccharidoses	12
Chromosome instabilities in resynthesized Brassica napus revealed by FISH	11
Mutation profiling of a limbless pig reveals genome-wide regulation of RNA processing related to bone development	11
Recent genetic advances on boar taint reduction as an alternative to castration: a review	11
GWAS and gene networks for milk-related traits from test-day multiple lactations in Portuguese Holstein cattle	11
A genome-wide association study for prolificacy in three Polish sheep breeds	10
Endemicity of OXA-23 and OXA-72 in clinical isolates of Acinetobacter baumannii from three neighbouring countries in Southeast Europe	10
Reconciling the debate on deamination on viral RNA	10
Old Catharanthus roseus culture (14 years) produced somatic embryos and plants and showed normal genome size; demonstrated an increased antioxidant defense mechanism; and synthesized stress proteins a	10

MiR-96-5p is an oncogene in lung adenocarcinoma and facilitates tumor progression through ARHGAP6 downregulation	10
Direct somatic embryogenesis and flow cytometric assessment of ploidy stability in regenerants of Caladium × hortulanum ‘Fancy’	9
Genome-wide identification and characterization of Lectin receptor-like kinase (LecRLK) genes in mungbean (Vigna radiata L. Wilczek)	9
RNA editing detection in SARS-CoV-2 transcriptome should be different from traditional SNV identification	9
Insights into genetic diversity and population structure of Indian carrot (Daucus carota L.) accessions	9
Genome size and gas chromatography-mass spectrometry (GC–MS) analysis of field-grown and in vitro regenerated Pluchea lanceolata plants	9
Transcriptome sequencing of wild soybean revealed gene expression dynamics under low nitrogen stress	9
Genome-wide identification and expression analysis of the MADS-box transcription factor family in Camellia sinensis	9
Cyto-genotoxic effects of Pinoxaden on Allium cepa L. roots	8
Growth assessment in children with Williams-Beuren syndrome: a systematic review	8
Development of PCR-based markers and whole-genome selection model for anthracnose resistance in white lupin (Lupinus albus L.)	8
Differential expression of lung adenocarcinoma transcriptome with signature of tobacco exposure	7
Testosterone increases apoptotic cell death and decreases mitophagy in Leber’s hereditary optic neuropathy cells	7
Circulating miRNA as potential biomarkers for diabetes mellitus type 2: should we focus on searching for sex differences?	7
Genome-wide characterization of carotenoid oxygenase gene family in three cotton species and functional identification of GaNCED3 in drought and salt stress	7
Molecular identification of slow rusting resistance Lr46/Yr29 gene locus in selected triticale (× Triticosecale Wittmack) cultivars	7
Identification, genomic organization, and expression profiles of single C2H2 zinc finger transcription factors in tomato (Solanum lycopersicum)	7
QTL analysis of seed germination traits in tobacco (Nicotiana tabacum L.)	7
High-resolution mapping of the quantitative trait locus (QTLs) conferring resistance to false smut disease in rice	7
Analysis of miRNA expression associated with the Lr46 gene responsible for APR resistance in wheat (Triticum aestivum L.)	7
Searching for new molecular markers for cells obtained from abdominal aortic aneurysm	6
MicroRNA signature in classical Hodgkin lymphoma	6
Discovery of genomic regions associated with resistance to late wilt disease caused by Harpophora maydis (Samra, Sabet and Hing) in maize (Zea mays L.)	6
Genetic modifiers and phenotypic variability in neuromuscular disorders	6
Further phenotypic delineation of the auriculocondylar syndrome type 2 with literature review	6
The genetic basis of cold tolerance in cucumber (Cucumis sativus L.)—the latest developments and perspectives	6
How far musicality and perfect pitch are derived from genetic factors?	6
DNA methylation studies in cattle	6
SERPINB2—its regulation and interplay with aryl hydrocarbon receptor	6
Herbicide stress-induced DNA methylation changes in two Zea mays inbred lines differing in Roundup® resistance	6
Genetic diversity and population structure analysis for morphological traits in upland cotton (Gossypium hirsutum L.)	6
Characterization of crtRB1- and vte4-based biofortified sweet corn inbreds for seed vigour and physico-biochemical traits	5
Identification of significant marker-trait associations for Fusarium wilt resistance in a genetically diverse core collection of safflower using AFLP and SSR markers	5
Genome-wide identification and characterization of glutathione S-transferase gene family in Musa acuminata L. AAA group and gaining an insight to their role in banana fruit development	5
Investigation of obsolete diversity of rye (Secale cereale L.) using multiplexed SSR fingerprinting and evaluation of agronomic traits	5
Mutagenic strategies against luxS gene affect the early stage of biofilm formation of Campylobacter jejuni	5
Transcriptomic profile of semitendinosus muscle of bulls of different breed and performance	5
Genome-wide identification and expression analysis of glycosyltransferase gene family 1 in Quercus robur L.	5
Analytical and numerical comparisons of two methods of estimation of additive × additive × additive interaction of QTL effects	5
Small mutations in Duchenne/Becker muscular dystrophy in 164 unrelated Polish patients	5
Genome-wide post-transcriptional regulation of bovine mammary gland response to Streptococcus uberis	5
AP4B1-associated hereditary spastic paraplegia: expansion of phenotypic spectrum related to homozygous p.Thr387fs variant	5
Genome-wide SSR markers in bottle gourd: development, characterization, utilization in assessment of genetic diversity of National Genebank of India and synteny with other related cucurbits	5
The basis of mink susceptibility to SARS-CoV-2 infection	5
Influence of coat color on genetic parameter estimates in horses	5
Dog–human translational genomics: state of the art and genomic resources	5
Expression gradient of metalloproteinases and their inhibitors from proximal to distal segments of abdominal aortic aneurysm	5
Different response of perennial ryegrass—Epichloë endophyte symbiota to the elevated concentration of heavy metals in soil	5
A complex network of QTL for thousand-kernel weight in the rye genome	4
Enhancement of undecylprodigiosin production from marine endophytic recombinant strain Streptomyces sp. ALAA-R20 through low-cost induction strategy	4

In silico and in vitro analysis of the impact of single substitutions within EXO-motifs on Hsa-MiR-1246 intercellular transfer in breast cancer cell	4
FISH karyotype comparison between Ab- and A-genome chromosomes using oligonucleotide probes	4
Genetic testing—whether to allow complete freedom? Direct to consumer tests versus genetic tests for medical purposes	4
The complete chloroplast genome of Secale sylvestre (Poaceae: Triticeae)	4
Genetic mapping of adult-plant resistance genes to powdery mildew in triticale	4
Detection of candidate gene networks involved in resistance to Sclerotinia sclerotiorum in soybean	4
Triticale doubled haploid plant regeneration factors linked by structural equation modeling	4
A simple sexing test for elephant species and its application to faecal DNA	4
Impact of gene therapy for canine monogenic diseases on the progress of preclinical studies	4
The application of deep learning for the classification of correct and incorrect SNP genotypes from whole-genome DNA sequencing pipelines	4
A 1.84-Mb region on rice chromosome 2 carrying SPL4, SPL5 and MLO8 genes is associated with higher yield under phosphorus-deficient acidic soil	4
De novo transcriptome of the whole-body of the gastropod mollusk Philomycus bilineatus, a pest with medical potential in China	4
Molecular diversity, haplotype distribution and genetic variation flow of Bipolaris sorokiniana fungus causing spot blotch disease in different wheat-growing zones	4
Telomere length variation does not correspond with the growth disturbances in the rainbow trout (Oncorhynchus mykiss)	4
Genetic analysis of novel resistance sources and genome-wide association mapping identified novel QTLs for resistance to Zymoseptoria tritici, the causal agent of septoria tritici blotch in wheat	4
Haploinsufficiency of tau decreases survival of the mouse model of Niemann–Pick disease type C1 but does not alter tau phosphorylation	3
Development of molecular markers based on LTR retrotransposon in the Cleistogenes songorica genome	3
Development of high-resolution melting PCR (HRM-PCR) assay to identify native fungal species associated with the wheat endosphere	3
Use of multivariate factor analysis of detailed milk fatty acid profile to perform a genome-wide association study in Italian Simmental and Italian Holstein	3
MicroRNA in lung cancer—a novel potential way for early diagnosis and therapy	3
Portuguese wild hop diversity assessment by fast SNP genotyping using high-resolution melting	3
Clinical characteristics of Polish patients with molecularly confirmed Mowat-Wilson syndrome	3
Pathogenic variants in plakophilin-2 gene (PKP2) are associated with better survival in arrhythmogenic right ventricular cardiomyopathy	3
Genetic mapping of pollen fertility restoration QTLs in rye (Secale cereale L.) with CMS Pampa	3
Genome-wide development of miRNA-based SSR markers in Cleistogenes songorica and analysis of their transferability to Gramineae/non-Gramineae species	3
Intracardiac tumor as a rare manifestation of genetic syndromes—presentation of a family with Gorlin syndrome and a literature review	3
Cytological and genetic characterisation of dominant GMS line Shaan-GMS in Brassica napus L.	3
Genetic basis of some physiological traits and yield in early and late sowing conditions in bread wheat (Triticum aestivum L.)	3
Modern therapies of nonsmall cell lung cancer	3
Parentage-based tagging and parentage analyses of stocked sea trout in Vistula River commercial catches	3
The genetic diversity of group-1 homoeologs and characterization of novel LMW-GS genes from Chinese Xinjiang winter wheat landraces (Triticum aestivum L.)	3
No evidence that long runs of homozygosity tend to harbor risk variants for polygenic obesity in Labrador retriever dogs	3
Effect of copper and silver ions on sequence and DNA methylation changes in triticale regenerants gained via somatic embryogenesis	3
Effects of genotype × environment interaction on the estimation of genetic parameters and gains in Nile tilapia	3
Application of a custom NGS gene panel revealed a high diagnostic utility for molecular testing of hereditary ataxias	3
The mutation profile of differentiated thyroid cancer coexisting with undifferentiated anaplastic cancer resembles that of anaplastic thyroid cancer but not that of archetypal differentiated thyroid c	2
Genetic variation of Cerastium alpinum L. from Babia Góra, a critically endangered species in Poland	2
Genetic and genomic characterization followed by single-step genomic evaluation of withers height in German Warmblood horses	2
Discrete roles of RNA helicases in human male germline and spermatogenesis	2
CDON gene contributes to pituitary stalk interruption syndrome associated with unilateral facial and abducens nerve palsy	2
Effect of genomic X-chromosome regions on Nelore bull fertility	2
QTL mapping for adult plant resistance to wheat stripe rust in M96-5 × Guixie 3 wheat population	2
Identification of eQTLs and differential gene expression associated with fetal programming in beef cattle	2
Another lesson from unmapped reads: in-depth analysis of RNA-Seq reads from various horse tissues	2
Circular RNA circ_0000119 promotes cervical cancer cell growth and migration via miR-433-3p/PAK2 axis	2
Chloroplast genome of the invasive Pyrus calleryana underscores the high molecular diversity of the species	2
Genetic mapping of male sterility and pollen fertility QTLs in triticale with sterilizing Triticum timopheevii cytoplasm	2
Response of the ileum transcriptome to probiotic and fructo-oligosaccharides in Taiping chicken	2
Mitochondrial relationships between various chamomile accessions	2
Cytogenetic investigation of Arctic char × brook trout F1, F2 and backcross hybrids revealed remnants of the chromosomal rearrangements	2
Developing a new genic SSR primer database in faba bean (Vicia faba L.)	2
Genetic variants of MTHFR gene in relation to folic acid levels and bone mineral density in Polish patients with inflammatory bowel disease	2
In search of the relationship between the rye polyamine oxidase (PAO) gene and resistance to powdery mildew (PM)	2
Highly diverse phenotypes of mucopolysaccharidosis type IIIB sibling patients: effects of an additional mutation in the AUTS2 gene	2
Separating gene clustering in the rare mucopolysaccharidosis disease	2
Genetic diversity in Kashubs: the regional increase in the frequency of several disease-causing variants	2
Investigating the genetic profile of familial atypical cystic fibrosis patients (DeltaF508-CFTR) with neonatal biliary atresia	2
Prospective study relating genotype profiles with race performance in racing pigeons	2
A-to-I RNA editing shows dramatic up-regulation in osteosarcoma and broadly regulates tumor-related genes by altering microRNA target regions	1
Structure and functions of a multireplicon genome of Antarctic Psychrobacter sp. ANT_H3: characterization of the genetic modules suitable for the construction of the plasmid-vectors for cold-active ba	1
Comparative analysis of developing grain transcriptome reveals candidate genes and pathways improving GPC in wheat lines derived from wild emmer	1
Complete chloroplast genome sequence of Camellia sinensis: genome structure, adaptive evolution, and phylogenetic relationships	1
Autosomal recessive diseases among the Athabaskans of the southwestern United States: anthropological, medical, and scientific aspects	1
Inheritance vs. infectivity as a mechanism of malady and death of Frederic Chopin	1
Assessment of natural DNA methylation variation and its association with economically important traits in dolichos bean (Lablab purpureus L. Var. Lignosus) using AMP-PCR assay	1
Cytomolecular analysis of mutants, breeding lines, and varieties of camelina (Camelina sativa L. Crantz)	1
Variants of the CASP9 gene as candidate markers for primary response to anti-TNF therapy in Crohn’s disease patients	1
Comprehensive analyses of microtubule-associated protein MAP65 family genes in Cucurbitaceae and CsaMAP65s expression profiles in cucumber	1
Anesthesia for Stüve-Wiedemann syndrome: a rare adult patient case report	1
TGFα-EGFR pathway in breast carcinogenesis, association with WWOX expression and estrogen activation	1
Molecular identification of triticale introgression lines carrying leaf rust resistance genes transferred from Aegilops kotschyi Boiss. and Ae. tauschii Coss	1
Virulence genes, phylogenetic analysis, and antimicrobial resistance of Escherichia coli isolated from urinary tract infection in hospitalized patients and outpatients	1
FGFR3 and FGFR4 overexpression in juvenile nasopharyngeal angiofibroma: impact of smoking history and implications for personalized management	1
Identification and characterization of Ageratum yellow vein Malaysia virus (AYVMV) and an associated betasatellite among begomoviruses infecting Solanum lycopersicum in Malaysia	1
Canis MitoSNP database: a functional tool useful for comparative analyses of human and canine mitochondrial genomes	1
Correction to: DNA methylation studies in cattle	1
Factors affecting clinical manifestation of chromosomal imbalance in carriers of segmental autosomal mosaicism: differential impact of gender	1
The effects of heading time on yield performance and HvGAMYB expression in spring barley subjected to drought	1
New PCR-specific markers for pollen fertility restoration QRfp-4R in rye (Secale cereale L.) with Pampa sterilizing cytoplasm	1
Genetic diversity and inter-gene pool introgression of Mesoamerican Diversity Panel in common beans	1

Multimetal bioremediation from aqueous solution using dead biomass of Mucor sp. NRCC6 derived from detergent manufacturing effluent	1
Investigation of the biofilm formation in extra-intestinal pathogenic Escherichia coli ST131 strains and its correlation with the presence of fimH, afa, and kpsMSTII genes	1
Enhancement of nutritional quality in maize kernel through marker-assisted breeding for vte4, crtRB1, and opaque2 genes	1
Replacement of microsatellite markers by imputed medium-density SNP arrays for parentage control in German warmblood horses	1
Population structure and genetic diversity of a germplasm for hybrid breeding in rye (Secale cereale L.) using high-density DArTseq-based silicoDArT and SNP markers	1
Application of OpenArray RT-qPCR for identification of microRNA expression signatures of lower extremity artery disease	1
Bioherbicidal potential of Bacillus altitudinis D30202 on Avena fatua L.: a whole-genome sequencing analysis	1
Genome-wide identification and expression profiles of AP2/ERF transcription factor family in mung bean (Vigna radiata L.)	1
Genome-wide association mapping in elite winter wheat breeding for yield improvement	1
Mutations within gene XNR_2147 for TetR-like protein enhance lincomycin resistance and endogenous specialized metabolism of Streptomyces albus J1074	1
Prediction ability for growth and maternal traits using SNP arrays based on different marker densities in Nellore cattle using the ssGBLUP	1
The use of weighted multiple linear regression to estimate QTL × QTL × QTL interaction effects of winter wheat (Triticum aestivum L.) doubled-haploid lines	1
Non-mosaic X monosomy (77,X) in a female dog with signs of virilization	1
Pedigree reconstruction and population structure using SNP markers in Gir cattle	1
Methylation of hypoxia-inducible factor 3 subunit alpha contributes to poor prognosis in lung adenocarcinoma	1
Genome-wide analysis of genetic predisposition to common polygenic cancers	1
Molecular background of Leber congenital amaurosis in a Polish cohort of patients—novel variants discovered by NGS	1
Genetic analysis of purple pigmentation in rice seed and vegetative parts — implications on developing high-yielding purple rice (Oryza sativa L.)	1
Comparative genomic analysis of Stenotrophomonas maltophilia unravels their genetic variations and versatility trait	1