Journal of Microbiology

Papers
(The TQCC of Journal of Microbiology is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-09-01 to 2024-09-01.)
ArticleCitations
Introducing EzAAI: a pipeline for high throughput calculations of prokaryotic average amino acid identity204
UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis115
Potential of Bacillus velezensis as a probiotic in animal feed: a review56
Linking the gut microbiota to persistent symptoms in survivors of COVID-19 after discharge45
Prokaryotic DNA methylation and its functional roles40
Omics in gut microbiome analysis39
Dissection of plant microbiota and plant-microbiome interactions39
Devosia rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., novel plant growth promoting members of the genus Devosia, isolated from the rhizosphere of rice plants37
Raloxifene as a treatment option for viral infections35
GABA-producing Lactobacillus plantarum inhibits metastatic properties and induces apoptosis of 5-FU-resistant colorectal cancer cells via GABAB receptor signaling31
The effects of cigarettes and alcohol on intestinal microbiota in healthy men30
Development of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) thermal inactivation method with preservation of diagnostic sensitivity28
Gain and loss of antibiotic resistant genes in multidrug resistant bacteria: One Health perspective28
Description of Microbacterium luteum sp. nov., Microbacterium cremeum sp. nov., and Microbacterium atlanticum sp. nov., three novel C50 carotenoid producing bacteria27
Anti-inflammatory and anti-oxidative effect of Korean propolis on Helicobacter pylori-induced gastric damage in vitro27
Lactobacillus plantarum-derived metabolites sensitize the tumor-suppressive effects of butyrate by regulating the functional expression of SMCT1 in 5-FU-resistant colorectal cancer cells25
The quorum sensing regulator OpaR is a repressor of polar flagellum genes in Vibrio parahaemolyticus24
Current status and perspectives on vaccine development against dengue virus infection24
Rediscovery of antimicrobial peptides as therapeutic agents23
Description of Nocardioides piscis sp. nov., Sphingomonas piscis sp. nov. and Sphingomonas sinipercae sp. nov., isolated from the intestine of fish species Odontobutis interrupta (Korean spotted sleep23
Nanoparticle and virus-like particle vaccine approaches against SARS-CoV-222
A study of P release from Fe-P and Ca-P via the organic acids secreted by Aspergillus niger22
The synergy effect of arbuscular mycorrhizal fungi symbiosis and exogenous calcium on bacterial community composition and growth performance of peanut (Arachis hypogaea L.) in saline alkali soil21
SARS-CoV-2-mediated evasion strategies for antiviral interferon pathways21
Brevibacterium limosum sp. nov., Brevibacterium pigmenatum sp. nov., and Brevibacterium atlanticum sp. nov., three novel dye decolorizing actinobacteria isolated from ocean sediments21
Phytochemicals for the treatment of COVID-1921
Different distribution patterns of microorganisms between aquaculture pond sediment and water21
Leucobacter coleopterorum sp. nov., Leucobacter insecticola sp. nov., and Leucobacter viscericola sp. nov., isolated from the intestine of the diving beetles, Cybister brevis and Cybister lewisianus, 21
Intervention with kimchi microbial community ameliorates obesity by regulating gut microbiota20
A comprehensive review of SARS-CoV-2 genetic mutations and lessons from animal coronavirus recombination in one health perspective19
The rapid adaptation of SARS-CoV-2–rise of the variants: transmission and resistance19
Ammonia-oxidizing archaea in biological interactions17
Overview of bioinformatic methods for analysis of antibiotic resistome from genome and metagenome data17
Variations of microbial community in Aconitum carmichaeli Debx. rhizosphere soilin a short-term continuous cropping system17
Genetic diversity and population structure of the amylolytic yeast Saccharomycopsis fibuligera associated with Baijiu fermentation in China17
The human symbiont Bacteroides thetaiotaomicron promotes diet-induced obesity by regulating host lipid metabolism16
Microbial phenomics linking the phenotype to function: The potential of Raman spectroscopy16
Fungal diversity in deep-sea sediments from Magellan seamounts environment of the western Pacific revealed by high-throughput Illumina sequencing16
Comparative genomics analysis of Pediococcus acidilactici species15
High-throughput cultivation based on dilution-to-extinction with catalase supplementation and a case study of cultivating acI bacteria from Lake Soyang15
Influences of genetically perturbing synthesis of the typical yellow pigment on conidiation, cell wall integrity, stress tolerance, and cellulase production in Trichoderma reesei15
Description of Vagococcus coleopterorum sp. nov., isolated from the intestine of the diving beetle, Cybister lewisianus, and Vagococcus hydrophili sp. nov., isolated from the intestine of the dark div15
Lactobacillus-derived metabolites enhance the antitumor activity of 5-FU and inhibit metastatic behavior in 5-FU-resistant colorectal cancer cells by regulating claudin-1 expression15
Microbial source tracking using metagenomics and other new technologies15
COVID-19 vaccine development based on recombinant viral and bacterial vector systems: combinatorial effect of adaptive and trained immunity15
Inferences in microbial structural signatures of acne microbiome and mycobiome14
Temperature Matters: Bacterial Response to Temperature Change14
Gold nanoparticle-DNA aptamer-assisted delivery of antimicrobial peptide effectively inhibits Acinetobacter baumannii infection in mice14
Oecophyllibacter saccharovorans gen. nov. sp. nov., a bacterial symbiont of the weaver ant Oecophylla smaragdina14
Effects of digested Cheonggukjang on human microbiota assessed by in vitro fecal fermentation13
Description of Ornithinimicrobium ciconiae sp. nov., and Ornithinimicrobium avium sp. nov., isolated from the faeces of the endangered and near-threatened birds13
Regulation of gene expression by protein lysine acetylation in Salmonella13
Two years of COVID-19 pandemic: where are we now?13
Probiotic supplements alleviate gestational diabetes mellitus by restoring the diversity of gut microbiota: a study based on 16S rRNA sequencing13
Effects of multi-species probiotic supplementation on alcohol metabolism in rats12
Biosynthesis of adipic acid in metabolically engineered Saccharomyces cerevisiae12
Gene deletion and constitutive expression of the pectate lyase gene 1 (MoPL1) lead to diminished virulence of Magnaporthe oryzae12
NF-κB/ROS and ERK pathways regulate NLRP3 inflammasome activation in Listeria monocytogenes infected BV2 microglia cells12
Deep convolutional neural network: a novel approach for the detection of Aspergillus fungi via stereomicroscopy12
Effects of Continuous Straw Returning on Soil Functional Microorganisms and Microbial Communities12
Effects of mycosubtilin homolog algicides from a marine bacterium, Bacillus sp. SY-1, against the harmful algal bloom species Cochlodinium polykrikoides12
Role of melatonin in murine “restraint stress”-induced dysfunction of colonic microbiota12
Application of computational approaches to analyze metagenomic data11
Comparative analysis of type 2 diabetes-associated gut microbiota between Han and Mongolian people11
Recent Advances in CRISPR-Cas Technologies for Synthetic Biology11
The inner membrane protein LapB is required for adaptation to cold stress in an LpxC-independent manner11
Screening of small molecules attenuating biofilm formation of Acinetobacter baumannii by inhibition of ompA promoter activity11
Metaviromics coupled with phage-host identification to open the viral ‘black box’11
Diversity and composition of microbiota during fermentation of traditional Nuodeng ham10
Effect of exopolysaccharides of Paenibacillus polymyxa rhizobacteria on physiological and morphological variables of wheat seedlings10
Distinct gut microbiotas between southern elephant seals and Weddell seals of Antarctica10
Transmissibility and pathogenicity of SARS-CoV-2 variants in animal models9
Coronavirus enzyme inhibitors-experimentally proven natural compounds from plants9
The comparison of microbial communities in thyroid tissues from thyroid carcinoma patients9
Characterization of a novel dsRNA mycovirus of Trichoderma atroviride NFCF377 reveals a member of “Fusagraviridae” with changes in antifungal activity of the host fungus9
Envelope-Stress Sensing Mechanism of Rcs and Cpx Signaling Pathways in Gram-Negative Bacteria9
Chitosan-chelated zinc modulates cecal microbiota and attenuates inflammatory response in weaned rats challenged with Escherichia coli9
Omp16, a conserved peptidoglycan-associated lipoprotein, is involved in Brucella virulence in vitro9
Detection of colistin-resistant populations prior to antibiotic exposure in KPC-2-producing Klebsiella pneumoniae clinical isolates9
Influence of dragon bamboo with different planting patterns on microbial community and physicochemical property of soil on sunny and shady slopes9
Pathogenomics of Streptococcus ilei sp. nov., a newly identified pathogen ubiquitous in human microbiome9
Pikeienuella piscinae gen. nov., sp. nov., a novel genus in the family Rhodobacteraceae9
Salicibibacter cibarius sp. nov. and Salicibibacter cibi sp. nov., two novel species of the family Bacillaceae isolated from kimchi8
Activity of Lactobacillus crispatus isolated from vaginal microbiota against Mycobacterium tuberculosis8
Direct current exerts electricidal and bioelectric effects on Porphyromonas gingivalis biofilms partially via promoting oxidative stress and antibiotic transport8
Ganoderma boninense mycelia for phytochemicals and secondary metabolites with antibacterial activity8
Raman spectroscopy reveals alteration of spore compositions under different nutritional conditions in Lysinibacillus boronitolerans YS118
T cell responses to SARS-CoV-2 in humans and animals8
Influence of Microbiota on Vaccine Effectiveness: “Is the Microbiota the Key to Vaccine-induced Responses?”8
Biophysical characterization of antibacterial compounds derived from pathogenic fungi Ganoderma boninense8
Lysobacter arenosi sp. nov. and Lysobacter solisilvae sp. nov. isolated from soil8
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