Genetics in Medicine

Papers
(The TQCC of Genetics in Medicine is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-11-01 to 2025-11-01.)
ArticleCitations
Optical genome mapping improves clinical interpretation of constitutional copy-number gains and reduces their VUS burden431
Masthead281
Correspondence on “Elucidating the clinical and genetic spectrum of inositol polyphosphate phosphatase INPP4A-related neurodevelopmental disorder” by Rawlins et al228
Inherited variants in CHD3 show variable expressivity in Snijders Blok-Campeau syndrome188
Expanding the phenotype and genotype spectrum of TAOK1 neurodevelopmental disorder and delineating TAOK2 neurodevelopmental disorder158
ClinGen recuration of hearing loss-associated genes demonstrates significant changes in gene-disease validity over time138
Editorial Board129
Scoping review and classification of deep learning in medical genetics120
Where there is no genetic counselor: An online decision-aid supports the majority of parents’ diagnostic genomic testing choices for their children111
The clinical geneticist workforce: Community forums to address challenges and opportunities88
Correspondence on “Genomic insights from a deeply phenotyped highly consanguineous neurodevelopmental disorders cohort” by Akter et al86
Cascade testing after exome sequencing: Retrospective analysis of linked family data at 2 US laboratories84
Estimation of carrier frequencies of autosomal and X-linked recessive genetic conditions based on gnomAD v4.0 data in different ancestries81
Systematic evidence-based review: The application of noninvasive prenatal screening using cell-free DNA in general-risk pregnancies77
Increasing inclusivity in precision medicine research: Views of deaf and hard of hearing individuals73
Elucidating the clinical spectrum and molecular basis of HYAL2 deficiency70
Editorial Board69
eP234: SERPINA1 sequencing facilitates detection of undiagnosed Alpha-1 antitrypsin deficiency68
Desperately seeking solutions67
Educational considerations based on medical student use of polygenic risk information and apparent race in a simulated consultation67
eP033: COASY-associated pontocerebellar hypoplasia – A possible additional secondary target detectable by expanded newborn screening?66
eP162: Mosaic variant in ENG in infant with pulmonary arteriovenous malformations: Case report and review of hereditary hemorrhagic telangiectasia64
eP256: Intrafamilial variability in chromosome 2q13 microdeletion: Case report and review of the literature64
Functional genomics for curation of variants in telomere biology disorder associated genes: A systematic review59
Clinical likelihood ratios and balanced accuracy for 44 in silico tools against multiple large-scale functional assays of cancer susceptibility genes57
eP049: Discordant fluorescence in situ hybridization and RNASeq results in the identification of fusion partners in recurring translocations in hematological malignancies57
eP179: Expanding the phenotype of CLCN6-associated early-onset neurodegeneration55
eP290: A mosaic Angelman syndrome case with language apraxia and symptoms overlapping Prader-Willi syndrome54
eP169: A case report of Ververi-Brady syndrome: Expanding the genotype and phenotype54
Editorial Board54
OP037: Assessing the impact of expanded ACMG secondary findings recommendations on population genomic screening in the Geisinger MyCode Community Health Initiative53
OP055: Comparing error rates in disclosure of genome sequencing results between non-genetics providers and genetic counselors52
Biallelic PRMT7 pathogenic variants are associated with a recognizable syndromic neurodevelopmental disorder with short stature, obesity, and craniofacial and digital abnormalities51
Table of Contents51
eP498: Detection of congenital cytomegalovirus infection on high-risk newborn population51
Table of Contents49
The importance of automation in genetic diagnosis: Lessons from analyzing an inherited retinal degeneration cohort with the Mendelian Analysis Toolkit (MATK)48
Cost-effectiveness of exome and genome sequencing for children with rare and undiagnosed conditions48
Biallelic DAW1 variants cause a motile ciliopathy characterized by laterality defects and subtle ciliary beating abnormalities48
Improving racial diversity in the genomics workforce: An examination of challenges and opportunities44
Characterization of central manifestations in patients with Niemann-Pick disease type C44
Correspondence on “Genotypic and phenotypic spectrum of infantile liver failure due to pathogenic TRMU variants” by Vogel et al44
Masthead44
eP073: Interstitial deletion of 3q21 in a child with multiple congenital anomalies; Expanding the phenotype43
Biallelic CRELD1 variants cause a multisystem syndrome, including neurodevelopmental phenotypes, cardiac dysrhythmias, and frequent infections42
eP018: Late-onset congenital erythropoietic porphyria associated with myeloid malignancy41
eP114: De novo prenatal diagnosis of X-linked Acromegaly Gigantism (X-LAG)40
eP005: Complex glycerol kinase deficiency and X-linked intellectual disability39
Calibrating variant curation by clinical context based on factors that influence patients’ tolerance of uncertainty39
eP512: Identifying clinical and psychological factors associated with genomics-related outcomes in a centralized sequencing protocol39
OP048: The impact of route of delivery on surgical morbidity in fetuses affected by achondroplasia: A multicenter retrospective study38
eP088: Diagnosing a patient with progressive myoclonic epilepsy-12 with variants of uncertain significance on exome sequencing38
Long-term effects of eliglustat on skeletal manifestations in clinical trials of patients with Gaucher disease type 138
eP462: Detection of clinically relevant exonic copy number changes in fetuses by chromosomal microarray analysis38
eP270: Incorporating genetic services into adult kidney disease care38
eP509: Implementation and impact of dedicated inpatient genetic counselors in a children’s hospital37
Clinical implementation of genetic testing in adults for hereditary hematologic malignancy syndromes36
eP229: A case report of a complex chromosome 8 rearrangement with partial monosomy of 8p and partial trisomy of 8q35
CFTR genotype analysis of Asians in international registries highlights disparities in the diagnosis and treatment of Asian patients with cystic fibrosis35
Editorial Board35
De novo variants are a common cause of genetic hearing loss35
eP354: A systematic approach for applying disease-specific phenotype in clinical variant interpretation34
eP244: Rapid exome sequencing influences acute and long-term management of critically unwell children and their families34
eP321: Extending and adapting the functions of genetic laboratories in the continuing COVID pandemic–challenges and successes34
The splicing effect of variants at branchpoint elements in cancer genes34
eP263: A pathogenic deletion at 13q32.1q33.1 presenting with bilateral sensorineural hearing loss and pigmentation anomalies, mimicking Waardenburg syndrome33
Challenges for precision public health communication in the era of genomic medicine32
eP358: Genetic findings in a cohort of patients with pulmonary arterial hypertension referred for NGS panel testing32
Exploring Autistic adults’ perspectives on genetic testing for autism31
Universal tumor screening in a population with MSH6- and PMS2-associated Lynch syndrome31
Genetics providers’ perspectives on the use of digital tools in clinical practice31
A novel DPH5-related diphthamide-deficiency syndrome causing embryonic lethality or profound neurodevelopmental disorder31
“The truth should not be hidden”: Experiences and recommendations of individuals making NPE discoveries through genetic genealogy databases30
Real-world diagnostic outcomes and cost-effectiveness of genome-wide sequencing for developmental and seizure disorders: Evidence from Canada30
Updated clinical practice recommendations for managing adults with 22q11.2 deletion syndrome30
Expanding SPTAN1 monoallelic variant associated disorders: From epileptic encephalopathy to pure spastic paraplegia and ataxia30
Rethinking agency for genetic testing intention among Latinos: Determining predictors of intention for carrier screening and cancer predisposition testing29
Documentation of results and medication prescribing after combinatorial psychiatric pharmacogenetic testing: A case for discrete results29
Correspondence on “Comparison of literature mining tools for variant classification: Through the lens of 50 RYR1 variants” by Wermers et al29
Nonadherence to guidelines for genetic testing in families with ovarian cancer shows racial bias29
Secondary ACMG and non-ACMG genetic findings in a multiethnic cohort of 16,713 pediatric participants28
Response to Kiel and Kozaric28
Clinical and genetic delineation of autosomal recessive and dominant ACTL6B-related developmental brain disorders28
Overcoming treatment implementation barriers for individuals with rare diseases using single-case experimental designs28
Editorial Board28
Response to Shen et al.27
Noncoding variants are a rare cause of recessive developmental disorders in trans with coding variants27
Masthead27
eP153: WASF2 variants contribute to heart failure phenotypes26
Diagnosing, discarding, or de-VUSsing: A practical guide to (un)targeted metabolomics as variant-transcending functional tests26
The opinions and experiences of people with intellectual disability regarding genetic testing and genetic medicine: A systematic review26
eP249: Practical implementation of inpatient rapid comprehensive sequencing for critically ill pediatric patients25
eP364: Lessons from pathogenicity classifications for 251 RYR1 variants associated with malignant hyperthermia susceptibility using variant curation expert panel revised criteria25
eP082: Associated recessive retinitis pigmentosa caused by paternal uniparental disomy25
eP198: EIF3F compound heterozygous genotype-phenotype association25
eP398: Searching beyond the exons in nuclear genes: Diagnostic deep intronic and mitochondrial variants in patients with monogenic diabetes25
Response to Stern25
eP006: Homocystinuria in an adolescent patient with Chr21q22.2q22.3 deletion25
eP342: Clinical testing of SHOX gene for SHOX deficiency disorders25
eP091: Improving cytogenetic testing utilization in a tertiary care NICU through quality improvement25
eP446: High rates of ‘atypical’ panorama noninvasive prenatal screening results among consanguineous Arab American women25
Pubertal growth in osteogenesis imperfecta caused by pathogenic variants in COL1A1/COL1A224
Genome sequencing detects a wide range of clinically relevant copy-number variants and other genomic alterations24
Correspondence on “Mainstreaming of clinical genetic testing: a conceptual framework” by Mackley et al24
OP012: Perceptions of breast and ovarian cancer risk and genetic testing among Non-Hispanic Black women24
Correspondence on “Screening for autosomal recessive and X-linked conditions during pregnancy and preconception: A practice resource of the American College of Medical Genetics and Genomics (ACMG)” by24
Screening rare genetic diagnoses for amenability to bespoke antisense oligonucleotide therapy development: a retrospective cohort study24
Novel insights into the phenotypic spectrum and pathogenesis of Hardikar syndrome24
The Parent PrU: A measure to assess personal utility of pediatric genomic results24
Pregnant Latinas’ views of adopting exome sequencing into newborn screening: A qualitative study24
Awareness and use of genetic testing: An analysis of the Health Information National Trends Survey 202024
Risk of cancer in heterozygous relatives of patients with Fanconi anemia23
Impact of genetic counseling strategy on diagnostic yield and workload for genome-sequencing-based tumor diagnostics23
Expanding the genetics and phenotypes of ocular congenital cranial dysinnervation disorders23
Biallelic variation in the choline and ethanolamine transporter FLVCR1 underlies a severe developmental disorder spectrum23
COVID-19 in people with neurofibromatosis 1, neurofibromatosis 2, or schwannomatosis23
The ACMG SF v3.0 gene list increases returnable variant detection by 22% when compared with v2.0 in the ClinSeq cohort23
Frequency of epistaxis and telangiectasia in patients with hereditary hemorrhagic telangiectasia (HHT) in comparison with the general population: Curaçao diagnostic criteria revisited23
Neurofilament light chain in cerebrospinal fluid as a novel biomarker in evaluating both clinical severity and therapeutic response in Niemann-Pick disease type C122
Efficacy and safety of empagliflozin in glycogen storage disease type Ib: Data from an international questionnaire22
ORCA, a values-based decision aid for selecting additional findings from genomic sequencing in adults: Efficacy results from a randomized trial22
Masthead22
eP384: Clinical, epidemiological and genetic characteristics of children diagnosed with Multisystem Inflammatory Syndrome (MIS-C) in Kuwait22
Synostosis of joints caused by mutant FBN2 is linked to the abnormalities and misdifferentiation of articular surface cells22
Pathogenic XPO1 variants cause a dominant neurodevelopmental disorder22
Correspondence on “No association between FMR1 premutation and either ADHD or anxiety in 53,707 women undergoing genetic testing for family planning purposes” by Klausner et al22
Mapping the genetic landscape of treatable inherited metabolic disorders in a large Middle Eastern biobank22
eP128: A novel CSNK1E variant in a patient with autism spectrum disorder21
eP094: Diagnostic yield of chromosomal microarray in congenital heart disease: A single center retrospective study21
Optical genome mapping and revisiting short-read genome sequencing data reveal previously overlooked structural variants disrupting retinal disease−associated genes21
Editorial Board21
eP405: Clinical application of 24-hour ultra-rapid genome sequencing in a critically ill neonate21
Validation of lung cancer polygenic risk scores in a high-risk case-control cohort21
eP040: Breast cancer patients categorized as high-risk of recurrence and/or basal-type molecular subtype by Agendia should universally undergo germline genetic testing20
OP046: Stigma manifestations impact patient and clinical outcomes in cardiogenetic care: “Sometimes it’s depressing. Sometimes I feel like giving up.”20
eP164: A case report of neurological manifestations and failure to thrive in neurobehavioural disease caused by a variant in RFX720
eP426: Utilization of the ACMG ACT sheets and algorithms on the ACMG website20
Validation of the International Breast Cancer Intervention Study (IBIS) model in the High Risk Ontario Breast Screening Program: A retrospective cohort study20
Correspondence on “The evolving role of medical geneticists in the era of gene therapy: An urgency to prepare” by Vockley et al20
OP019: A tertiary care clinical sequencing program for patients with suspected immune defects: Results from the first 1000 families20
eP052: Coding defects in chromosomal segregation and protein targeting are central to TGCT predisposition20
eP391: Optical genome mapping for constitutional postnatal SV, CNV, and repeat array sizing: A multi-site clinical study20
High rate of hypomorphic variants as the cause of inherited ataxia and related diseases: study of a cohort of 366 families20
eP271: Bi-allelic loss of function variant of the ACTG2 gene that proposes a potential novel mechanism for visceral myopathies20
The 2019 medical genetics workforce: A focus on laboratory geneticists19
OP059: Clinical impact of a targeted pharmacogenomic assessment within a cohort of individuals with suspected inborn errors of immunity19
Pancreatic cancer risk to siblings of probands in bilineal cancer settings19
Additional findings from the 100,000 Genomes Project: A qualitative study of recipient perspectives19
Heterozygous UCHL1 loss-of-function variants cause a neurodegenerative disorder with spasticity, ataxia, neuropathy, and optic atrophy19
Focused Revision: Policy statement on folic acid and neural tube defects19
Masthead19
Biallelic variants in PCDHGC4 cause a novel neurodevelopmental syndrome with progressive microcephaly, seizures, and joint anomalies19
eP078: Phenotypes and genotypes in a cohort of children with single ventricle congenital heart disease19
Novel loss-of-function variant in DENND5A impedes melanosomal cargo transport and predisposes to familial cutaneous melanoma19
eP328: Establishing droplet digital PCR method for assessing mitochondrial DNA content in muscle19
Automated reanalysis application to assist in detecting novel gene–disease associations after genome sequencing19
Table of Contents18
Safety and efficacy of low-dose PI3K inhibitor taselisib in adult patients with CLOVES and Klippel–Trenaunay syndrome (KTS): the TOTEM trial, a phase 1/2 multicenter, open-label, single-arm study18
Quantifying evidence for phenotypic specificity (PP4) for syndromic phenotypes: Large-scale integration of rare germline FH variants from diagnostic laboratory testing for HLRCC and renal cancer18
The Clinician-reported Genetic Testing Utility Index (C-GUIDE) for Prenatal Care: Initial evidence of content and construct validity18
Correspondence on “Good survival outcome of metastatic SDH-deficient gastrointestinal stromal tumors harboring SDHA mutations” by Pantaleo et al18
High-affinity FcγRIIIa genetic variants and potent NK cell-mediated antibody-dependent cellular cytotoxicity (ADCC) responses contributing to severe COVID-1918
Natural history of TANGO2 deficiency disorder: Baseline assessment of 73 patients18
Fraud in genetic testing: Swindling the system18
Table of Contents18
Meta-analysis of the diagnostic and clinical utility of exome and genome sequencing in pediatric and adult patients with rare diseases across diverse populations18
Clinical and functional heterogeneity associated with the disruption of retinoic acid receptor beta18
Potential of polygenic risk scores for improving population estimates of women’s breast cancer genetic risks18
Recessive FANCM cancer syndrome with high cancer risks, chemotherapy toxicity, chromosome fragility, and gonadal failure17
Genomic testing for suspected monogenic kidney disease in children and adults: A health economic evaluation17
Economic evaluation of population-based, expanded reproductive carrier screening for genetic diseases in Australia17
CIAO1 and MMS19 deficiency: A lethal neurodegenerative phenotype caused by cytosolic Fe-S cluster protein assembly disorders17
Clinical factors associated with genetic diagnosis in suspected neurogenetic disorders in a tertiary care clinic17
eP041: How long will they wait? Applying updated NCCN criteria to previously unqualified patients reveals missed opportunities for personalized cancer management16
eP473: Patient attitudes and preferences about expanded noninvasive prenatal screening16
Impact of integrated translational research on clinical exome sequencing16
Editorial Board16
The impact of genetic counselor involvement in genetic and genomic test order review: A scoping review16
Genome-wide epigenetic signatures facilitated the variant classification of the PURA gene and uncovered the pathomechanism of PURA-related neurodevelopmental disorders16
eP421: Development of an in-house whole transcriptome test for evaluation of splicing VUS variants: Experience and challenges in variant interpretation16
eP376: NGS detection of NUDT15 6-bp insertion and UGT1A1 (TA) repeat polymorphism on a preventative genomics assay16
Masthead16
eP383: Mayo Clinic GeneGuide: A population-scale genetic interpretation software for reporting pathogenic and likely pathogenic variants impacting the CDC Tier1 genes16
Standards for the classification of pathogenicity of somatic variants in cancer (oncogenicity): Joint recommendations of Clinical Genome Resource (ClinGen), Cancer Genomics Consortium (CGC), and Varia16
Cost-effectiveness of population-wide genomic screening for Lynch Syndrome and polygenic risk scores to inform colorectal cancer screening16
eP248: Impact of DNA methylation signature exploration for variants of uncertain significance within epigenetic syndromes16
Standardizing variation: Scaling up clinical genomics in Australia16
eP208: GSD IX natural history and novel liver disease severity score: Multicenter international collaboration uncovers longitudinal trends in liver disease severity16
De novo PHF5A variants are associated with craniofacial abnormalities, developmental delay, and hypospadias16
Measurement of lysosomal enzyme activities: A technical standard of the American College of Medical Genetics and Genomics (ACMG)16
eP055: The Clinical Genome Resource (ClinGen) Somatic Cancer Clinical Domain Working Group15
eP272: Familial pathogenic variant causing osteogenesis imperfecta identified in the Puerto Rican population15
A systematic review of the methodological quality of economic evaluations in genetic screening and testing for monogenic disorders15
Large scale clinical exome sequencing uncovers the scope and severity of skin disorders associated with MC1R genetic variants15
Genetic Determinants of Sudden Unexpected Death in Pediatrics15
eP038: A new biochemical assay to measure plasmalogens with CLIR disease differentiation15
OP002: Secondary data analysis: Opportunities to advance genetic disease understanding and newborn screening research15
SOX11 variants cause a neurodevelopmental disorder with infrequent ocular malformations and hypogonadotropic hypogonadism and with distinct DNA methylation profile15
eP333: Tracking the emergence of SARS-CoV-2 variants of concern in vaccinated and unvaccinated patients15
Genetic testing in ambulatory cardiology clinics reveals high rate of findings with clinical management implications15
eP265: Higher rates of non-skeletal complications in achondroplasia compared to the general population: A UK matched cohort study using CPRD-GOLD database15
Functional characteristics of a broad spectrum of TBX6 variants in Mayer-Rokitansky-Küster-Hauser syndrome15
eP429: Factors associated with the time to complete clinical exome sequencing in a pediatric patient population15
Editorial Board14
Mainstreaming of clinical genetic testing: A conceptual framework14
The contribution of medical burden to 22q11.2 deletion syndrome quality of life and functioning14
Masthead14
Response to Timothé Ménard14
Gene-specific ACMG/AMP classification criteria for germline APC variants: Recommendations from the ClinGen InSiGHT Hereditary Colorectal Cancer/Polyposis Variant Curation Expert Panel14
Improving care for rare genetic neurodevelopmental disorders: A systematic review and critical appraisal of clinical practice guidelines using AGREE II14
Safe and persistent growth-promoting effects of vosoritide in children with achondroplasia: 2-year results from an open-label, phase 3 extension study14
OP016: Mini-COMET: Safety and efficacy of ≥97 weeks’ avalglucosidase alfa in infantile-onset Pompe disease participants previously treated with alglucosidase alfa14
Breast cancer polygenic risk scores: a 12-month prospective study of patient reported outcomes and risk management behavior14
Pathogenic variants in the paired-related homeobox 1 gene (PRRX1) cause craniosynostosis with incomplete penetrance14
Germline variants in HEY2 functional domains lead to congenital heart defects and thoracic aortic aneurysms14
OP040: Clinical validation of tagmentation-based genome sequencing for germline disorders14
eP154: Predictive genomic medicine for thoracic aortic aneurysm and dissection14
The mitochondrial seryl-tRNA synthetase SARS2 modifies onset in spastic paraplegia type 414
A meta-analysis of diagnostic yield and clinical utility of genome and exome sequencing in pediatric rare and undiagnosed genetic diseases14
Classification of variants of reduced penetrance in high-penetrance cancer susceptibility genes: Framework for genetics clinicians and clinical scientists by CanVIG-UK (Cancer Variant Interpretation G14
“Doctors shouldn’t have to cheat the system”: Clinicians’ real-world experiences of the utility of genomic sequencing14
eP034: Novel use of global untargeted metabolomics in a patient with glycogen storage disease Ib receiving off label empagliflozin treatment14
How do members of the public expect to use variants of uncertain significance in their health care? A population-based survey13
Reconciling diversity in health and genomic data collection with the regulation of AI in clinical genomics13
eP332: The importance of parental sequencing depth in the setting of rapid genome sequencing13
eP330: Mosaicism for SMARCB1 or LZTR1 variants in patients with schwannomatosis in the UAB cohort13
Residual risk for additional recessive diseases in consanguineous couples13
eP341: The full (mutation) picture: One-third of patients with Fragile X syndrome present with neurodevelopmental disorders without dysmorphism or family history13
High detection rate from genetic testing in BRCA-negative women with familial epithelial ovarian cancer13
Biallelic USP14 variants cause a syndromic neurodevelopmental disorder13
Deep phenotyping of 11 individuals with pathogenic variants in RNU4-2 reveals a clinically recognizable syndrome13
Inactivation of DRG1, encoding a translation factor GTPase, causes a recessive neurodevelopmental disorder13
Biallelic variants in PIGN cause Fryns syndrome, multiple congenital anomalies-hypotonia-seizures syndrome, and neurologic phenotypes: A genotype–phenotype correlation study13
OP011: Physician recommendations after germline sequencing in pediatric cancer patients: Texas KidsCanSeq study13
Biomarker testing for lysosomal diseases: A technical standard of the American College of Medical Genetics and Genomics (ACMG)13
Expanding the genetic and phenotypic spectrum of ACTA2-related vasculopathies in a Dutch cohort13
“All doctors should be trained in that”: The co-production and mixed-methods evaluation of an educational toolkit to enable safe, high-quality genetic health care for people with intellectual disabili13
In This Issue13
eP520: Screening results in 186 any-health-status adults in primary care clinics receiving clinical NGS for 431 health risk and recessive genes13
YWHAE loss of function causes a rare neurodevelopmental disease with brain abnormalities in human and mouse13
Parents' experiences with sequencing of all known pediatric cancer predisposition genes in children with cancer12
Pathogenic variants in CLXN encoding the outer dynein arm docking–associated calcium-binding protein calaxin cause primary ciliary dyskinesia12
Genome sequencing as a first-line diagnostic test for hospitalized infants12
Masthead12
The ClinGen Brain Malformation Variant Curation Expert Panel: Rules for somatic variants in AKT3, MTOR, PIK3CA, and PIK3R212
Factors associated with the time to complete clinical exome sequencing in a pediatric patient population12
Editorial Board12
Breast cancer after ovarian cancer in BRCA1 and BRCA2 pathogenic variant heterozygotes: Lower rates for 5 years post chemotherapy12
Evaluation of an automated genome interpretation model for rare disease routinely used in a clinical genetic laboratory12
Discovering a new part of the phenotypic spectrum of Coffin-Siris syndrome in a fetal cohort12
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