Journal of Molecular Graphics & Modelling

Papers
(The median citation count of Journal of Molecular Graphics & Modelling is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-04-01 to 2024-04-01.)
ArticleCitations
Theoretical study on novel superalkali doped graphdiyne complexes: Unique approach for the enhancement of electronic and nonlinear optical response68
Cyclic versus straight chain oligofuran as sensor: A detailed DFT study67
Borophene as an electronic sensor for metronidazole drug: A computational study64
Virtual screening and molecular dynamics study of approved drugs as inhibitors of spike protein S1 domain and ACE2 interaction in SARS-CoV-260
Exploring how structural and dynamic properties of bovine and canine serum albumins differ from human serum albumin53
Prioritizing potential ACE2 inhibitors in the COVID-19 pandemic: Insights from a molecular mechanics-assisted structure-based virtual screening experiment51
Rutin and flavone analogs as prospective SARS-CoV-2 main protease inhibitors: In silico drug discovery study47
Evaluation of consensus scoring methods for AutoDock Vina, smina and idock46
End-capped group modification on cyclopentadithiophene based non-fullerene small molecule acceptors for efficient organic solar cells; a DFT approach46
Co2YZ (Y= Cr, Nb, Ta, V and Z= Al, Ga) Heusler alloys under the effect of pressure and strain46
High sensitivity of graphdiyne nanoflake toward detection of phosgene, thiophosgene and phosogenoxime; a first-principles study45
E484K mutation in SARS-CoV-2 RBD enhances binding affinity with hACE2 but reduces interactions with neutralizing antibodies and nanobodies: Binding free energy calculation studies44
Molecular dynamics simulation for membrane separation and porous materials: A current state of art review43
A first principles investigation on the influence of transition-metal elements on the structural, mechanical, and anisotropic properties of CaM2Al20 intermetallics43
Molecular dynamics simulations of choline chloride and phenyl propionic acid deep eutectic solvents: Investigation of structural and dynamics properties40
Impact of end-capped modification of MO-IDT based non-fullerene small molecule acceptors to improve the photovoltaic properties of organic solar cells39
Interaction studies of kidney biomarker volatiles on black phosphorene nanoring: A first-principles investigation37
Thermodynamic properties and hysteresis loops in a hexagonal core-shell nanoparticle37
Insight into the vacancy effects on mechanical and electronic properties of V5Si3 silicides from first-principles calculations36
New insights into NO adsorption on alkali metal and transition metal doped graphene nanoribbon surface: A DFT approach36
Pinpointing the potential hits for hindering interaction of SARS-CoV-2 S-protein with ACE2 from the pool of antiviral phytochemicals utilizing molecular docking and molecular dynamics (MD) simulations35
Exploring the impact of central core modifications among several push-pull configurations to enhance nonlinear optical response34
Surface functionalization of twisted graphene C32H15 and C104H52 derivatives with alkalis and superalkalis for NLO response; a DFT study33
DFT studies of single and multiple alkali metals doped C24 fullerene for electronics and nonlinear optical applications33
Separation of methane from ethane and propane by selective adsorption and diffusion in MOF Cu-BTC: A molecular simulation study32
Characterization of the non-covalent interaction between the PF-07321332 inhibitor and the SARS-CoV-2 main protease32
Ngn (Ng= Ne, Ar, Kr, Xe, and Rn; n=1, 2) encapsulated porphyrin-like porous C24N24 fullerene: A quantum chemical study30
Structure-based mimicking of hydroxylated biphenyl congeners (OHPCBs) for human transthyretin, an important enzyme of thyroid hormone system29
Interaction of small molecules with the SARS-CoV-2 papain-like protease: In silico studies and in vitro validation of protease activity inhibition using an enzymatic inhibition assay29
Molecular insight into the smart functionalized TMC-Fullerene nanocarrier in the pH-responsive adsorption and release of anti-cancer drugs29
Alkaline earth metals serving as source of excess electron for alkaline earth metals to impart large second and third order nonlinear optical response; a DFT study28
Investigate the importance of mechanical properties of SWCNT on doxorubicin anti-cancer drug adsorption for medical application: A molecular dynamic study28
Janus alkaline earthides with excellent NLO response from sodium and potassium as source of excess electrons; a first principles study27
Structural analysis of experimental drugs binding to the SARS-CoV-2 target TMPRSS227
CNT biodevices for early liver cancer diagnosis based on biomarkers detection- a promising platform26
Tuning the optoelectronic properties of oligothienyl silane derivatives and their photovoltaic properties25
Nano-porous C4N as a toxic pesticide's scavenger: A quantum chemical approach24
In silico approach for Post-SELEX DNA aptamers: A mini-review24
Structural, electronic and optical properties of metalloid element (B, Si, Ge, As, Sb, and Te) doped g-ZnO monolayer: A DFT study23
Novel green phosphorene sheets to detect tear gas molecules - A DFT insight23
Molecular modelling investigation for drugs and nutraceuticals against protease of SARS-CoV-223
Effect of formaldehyde properties on SnO2 clusters gas sensitivity: A DFT study23
Synergistic modification of end groups in Quinoxaline fused core-based acceptor molecule to enhance its photovoltaic characteristics for superior organic solar cells23
Adsorption studies of camphene and eucalyptol molecules on orthorhombic germanane nanosheet - A first-principles investigation23
In-silico functional and structural annotation of hypothetical protein from Klebsiella pneumonia: A potential drug target23
Intermolecular interaction among Remdesivir, RNA and RNA-dependent RNA polymerase of SARS-CoV-2 analyzed by fragment molecular orbital calculation22
Polyacylated anthocyanins constructively network with catalytic dyad residues of 3CLpro of 2019-nCoV than monomeric anthocyanins: A structural-relationship activity study with 10 anthocyanins using in22
Vienna soil organic matter modeler 2 (VSOMM2)22
Reactivity of eumelanin building blocks: A DFT study of monomers and dimers22
A DFT-based finite element approach for studying elastic properties, buckling and vibration of the arsenene21
Multifunctional inhibitors of SARS-CoV-2 by MM/PBSA, essential dynamics, and molecular dynamic investigations21
The interaction nature between hollow silica-based porous ionic liquids and CO2: A DFT study20
Molecular dynamics of the membrane interaction and localisation of prodigiosin20
Targeting the SARS-CoV-2 main protease using FDA-approved Isavuconazonium, a P2–P3 α-ketoamide derivative and Pentagastrin: An in-silico drug discovery approach20
Molecular insights into water desalination performance of pristine graphdiyne nanosheet membrane20
A classification model for blood brain barrier penetration20
MEDT study of the 1,3-DC reaction of diazomethane with Psilostachyin and investigation about the interactions of some pyrazoline derivatives with protease (Mpro) of nCoV-220
Machine learning glass transition temperature of styrenic random copolymers20
Validation of potential energy distribution by VEDA in vibrational assignment some of β-diketones; comparison of theoretical predictions and experimental vibration shifts upon deutration20
Probing the effect of polyethene glycol on the adsorption mechanisms of Gem on the hexagonal boron nitride as a highly efficient polymer-based drug delivery system: DFT, classical MD and Well-tempered20
Online tools to easily build virtual molecular models for display in augmented and virtual reality on the web20
Molecular insights into the differential dynamics of SARS-CoV-2 variants of concern19
Understanding fracture behavior of epoxy-based polymer using molecular dynamics simulation19
Electronic, magnetic, elastic, thermal and thermoelectric proprieties of Co2MnZ (Z=Al, Ge, Sn)19
Zipper phosphorene as sensing element towards formaldehyde and acetaldehyde – A first-principles insight19
Oxacarbon superalkali C3X3Y3 (X = O, S and Y = Li, Na, K) clusters as excess electron compounds for remarkable static and dynamic NLO response19
Effect of nelfinavir stereoisomers on coronavirus main protease: Molecular docking, molecular dynamics simulation and MM/GBSA study19
End-cap modeling on the thienyl-substituted benzodithiophene trimer-based donor molecule for achieving higher photovoltaic performance19
Protein ligand interaction analysis against new CaMKK2 inhibitors by use of X-ray crystallography and the fragment molecular orbital (FMO) method19
OctSurf: Efficient hierarchical voxel-based molecular surface representation for protein-ligand affinity prediction18
Predicting aqueous solubility by QSPR modeling18
A DFT study of fulvic acid binding with bivalent metals: Cd, Cu, Mg, Ni, Pb, Zn18
Torsional buckling analysis of MWCNTs considering quantum effects of fine scaling based on DFT and molecular mechanics method18
Magnetic behaviors of an antiferromagnetic/ferromagnetic bilayer in a time-dependent magnetic field18
Ab-initio prediction of the mechanical, magnetic and thermoelectric behaviour of perovskite oxides XGaO3 (X = Sc, Ti, Ag) using LDA+U functional: For optoelectronic devices18
Peri-, Chemo-, Regio-, Stereo- and Enantio-Selectivities of 1,3-dipolar cycloaddition reaction of C,N-Disubstituted nitrones with disubstituted 4-methylene-1,3-oxazol-5(4H)- one: A quantum mechanical 17
Twisted bilayer arsenene sheets as a chemical sensor for toluene and M-xylene vapours – A DFT investigation17
Molecular screening of antimalarial, antiviral, anti-inflammatory and HIV protease inhibitors against spike glycoprotein of coronavirus17
Modeling protein structures with the coarse-grained UNRES force field in the CASP14 experiment17
Selective adsorption of CO2 from gas mixture by P-decorated C24N24 fullerene assisted by an electric field: A DFT approach17
Theoretical prediction of the SO2 absorption by hollow silica based porous ionic liquids17
Targeting shikimate pathway: In silico analysis of phosphoenolpyruvate derivatives as inhibitors of EPSP synthase and DAHP synthase16
A comprehensive computational study and simulation of innovative zwitterionic materials for enhanced poly (vinylidene fluoride) membrane hydrophilicity16
Fracture fingerprint of polycrystalline C3N nanosheets: Theoretical basis16
Systematic DFT studies of CO-Tolerance and CO oxidation on Cu-doped Ni surfaces16
Interaction studies of propylene and butadiene on tricycle graphane nanosheet – A DFT outlook16
Molecular modelling identification of phytocompounds from selected African botanicals as promising therapeutics against druggable human host cell targets of SARS-CoV-216
Investigation on electrochemical performance of striped, β12 and χ3 Borophene as anode materials for lithium-ion batteries16
Density functional theory based studies on the adsorption of rare-earth ions from hydrated nitrate salt solutions on g-C3N4 monolayer surface16
Adsorption studies of nucleobases on ε-arsenene nanosheet based on first-principles research16
Silver cluster (Ag6) decorated coronene as non-enzymatic sensor for glucose and H2O216
Deeper inside the specificity of lysozyme when degrading chitosan. A structural bioinformatics study15
Thermal conductivity of random polycrystalline BC3 nanosheets: A step towards realistic simulation of 2D structures15
Deciphering the molecular basis of the kappa opioid receptor selectivity: A Molecular Dynamics study15
An in-silico evaluation of COVID-19 main protease with clinically approved drugs15
Omicron BA.1 and BA.2 variants increase the interactions of SARS-CoV-2 spike glycoprotein with ACE215
A molecular dynamic simulation study of anticancer agents and UiO-66 as a carrier in drug delivery systems15
Interaction studies of glycine, acetate and methylamine on β-tellurene nanoribbon – A first-principles analysis15
Prediction of critical properties of sulfur-containing compounds: New QSPR models15
Identification of correlated inter-residue interactions in protein complex based on the fragment molecular orbital method15
Prediction of potential inhibitors of the dimeric SARS-CoV2 main proteinase through the MM/GBSA approach15
Structure based pharmacophore modelling approach for the design of azaindole derivatives as DprE1 inhibitors for tuberculosis15
Computational insight on the binding and selectivity of target-subunit-dependent for neonicotinoid insecticides14
Surface wettability of various phases of titania thin films: Atomic-scale simulation studies14
Insight into the structural and functional analysis of the impact of missense mutation on cytochrome P450 oxidoreductase14
Inorganic electrides of alkali metal doped Zn12O12 nanocage with excellent nonlinear optical response14
Ligand-based pharmacophore modelling and virtual screening for the identification of amyloid-beta diagnostic molecules14
Single- and co-sensitization of triphenylamine-based and asymmetrical squaraine dyes on the anatase (001) surface for DSSC applications: Periodic DFT calculations14
Interaction and thermal stability of carboxymethyl cellulose on α-Fe2O3(001) surface: ReaxFF molecular dynamics simulations study14
Sorption studies of sulfadimethoxine and tetracycline molecules on β-antimonene nanotube - A first-principles insight14
Photodegradation of dye using Polythiophene/ZnO nanocomposite: A computational approach14
ab initio study of oxygen vacancy effects on structural, electronic and thermoelectric behavior of AZr1-xMxO3 (A = Ba, Ca, Sr; M= Al, Cu, x = 0.25) for application of memory devices14
Identifying highly effective coumarin-based novel cholinesterase inhibitors by in silico and in vitro studies14
Exploring the twisted molecular configurations for tuning their optical and nonlinear optical response properties: A quantum chemical approach14
Use of the index of ideality of correlation to improve aquatic solubility model14
DNA sequence similarity analysis using image texture analysis based on first-order statistics14
Molecular mechanism of Hetero Diels-Alder reactions between (E)-1,1,1-trifluoro-3-nitrobut-2-enes and enamine systems in the light of Molecular Electron Density Theory14
A DFT study of Janus structure of S and Se in HfSSe layered as a promising candidate for electronic devices13
Tuning of diphenylamine subphthalocyanine based small molecules with efficient photovoltaic parameters for organic solar cells13
Identification of phytocompounds as newer antiviral drugs against COVID-19 through molecular docking and simulation based study13
Quinoxaline based unfused non-fullerene acceptor molecules with PTB7-Th donor polymer for high performance organic solar cell applications13
Charge controlled capture/release of CH4 on Nb2CTx MXene: A first-principles calculation13
Extremely large static and dynamic nonlinear optical response of small superalkali clusters NM3M’ (M, M’=Li, Na, K)13
Electronic and transport property of two-dimensional boron phosphide sheet13
Physisorption of trichloroethylene and tetrachloroethylene on novel zeta arsenene nanotubes – A first-principles study13
On the need to introduce environmental characteristics in ab initio protein structure prediction using a coarse-grained UNRES force field13
Aggregation behaviors of thermo-responsive methylcellulose in water: A molecular dynamics simulation study13
Elucidating the Effect of Static Electric Field on Amyloid Beta 1–42 Supramolecular Assembly13
Specific interactions between tau protein and curcumin derivatives: Molecular docking and ab initio molecular orbital simulations13
Predicting novel drug candidates against Covid-19 using generative deep neural networks12
Theoretical and experimental investigation on decomposition mechanism of eco-friendly insulation gas HFO1234zeE12
Structure based drug designing and discovery of promising lead molecules against UDP-N-acetylenolpyruvoylglucosamine reductase (MurB): A potential drug target in multi-drug resistant Acinetobacter bau12
Modelling studies reveal the importance of the C-terminal inter motif loop of NSP1 as a promising target site for drug discovery and screening of potential phytochemicals to combat SARS-CoV-212
Effect of Al modification on the adsorption of As2O3 on the CaSiO3(001) surface: A DFT study12
Experimental and numerical study of SO2 removal from a CO2/SO2 gas mixture in a Cu-BTC metal organic framework12
A DFT-D2 study on the adsorption of phosgene derivatives and chloromethyl chloroformate on pristine and Fe4-decorated graphene12
Removal of methylene blue by using sodium alginate-based hydrogel; validation of experimental findings via DFT calculations12
Viscosity prediction of Pongamia pinnata (Karanja) oil by molecular dynamics simulation using GAFF and OPLS force field12
II-VI core/shell quantum dots and doping with transition metal ions as a means of tuning the magnetoelectronic properties of CdS/ZnS core/shell QDs: A DFT study12
Molecular dynamic simulation studies of adsorption and diffusion behaviors of methanol and ethanol through ZSM-5 zeolite12
CuN3 doped graphene as an active electrocatalyst for oxygen reduction reaction in fuel cells: A DFT study12
Computational aided acetaminophen – phthalic acid molecularly imprinted polymer design for analytical determination of known and new developed recreational drugs12
Optimization of covalent docking for organophosphates interaction with Anopheles acetylcholinesterase11
Molecular dynamics simulation of drug delivery across the cell membrane by applying gold nanoparticle carrier: Flutamide as hydrophobic and glutathione as hydrophilic drugs as the case studies11
Machine learning – Predicting Ames mutagenicity of small molecules11
Effect of 3d heterometallic ions on the magnetic properties of azido-Cu(II) with isonicotinic acid coligands: A theoretical perspective11
Molecular modeling and in vitro study on pyrocatechol as potential pharmacophore of CD151 inhibitor11
A density functional study on the formaldehyde recognition by Al-doped ZnO nanosheet11
Investigating the regio-, stereo-, and enantio-selectivities of the 1,3-dipolar cycloaddition reaction of C-cyclopropyl-N-phenylnitrone derivatives and benzylidenecyclopropane derivatives: A DFT study11
Efficient side-chain engineering of thieno-imidazole salt-based molecule to boost the optoelectronic attributes of organic solar cells: A DFT approach11
Computational investigation of N2O adsorption and dissociation on the silicon-embedded graphene catalyst: A density functional theory perspective11
Rational design, chemical synthesis and cellular evaluation of novel 1,3-diynyl derivatives of noscapine as potent tubulin binding anticancer agents11
Theoretical prediction of F-doped hexagonal boron nitride: A promising strategy to enhance the capacity of adsorptive desulfurization11
Evaluation of anti-cancer and anti-covid-19 properties of cationic pentapeptide Glu-Gln-Arg-Pro-Arg, from rice bran protein and its d-isomer analogs through molecular docking simulations11
A DFT study for improving the photovoltaic performance of organic solar cells by designing symmetric non-fullerene acceptors by quantum chemical modification on pre-existed LC81 molecule11
Identification of potential Mycolyltransferase Ag85C inhibitors of Mycobacterium tuberculosis H37Rv via Virtual High Throughput Screening and Binding free energy studies11
Investigation on adsorption features of nitroglycerin on novel red tricycle arsenene nanosheet – A first-principles study11
Multiple machine learning models combined with virtual screening and molecular docking to identify selective human ALDH1A1 inhibitors11
A computational study on the role of water and conformational fluctuations in Hsp90 in response to inhibitors11
Comparison of acidity and metal ion affinity of D-Glucosamine and N-acetyl-D-glucosamine, a DFT study11
Epitope mimicry analysis of SARS-COV-2 surface proteins and human lung proteins11
Graphene-like boron carbide monolayer as an electronic and work function-type sensor for dopamine drug11
Exploring the intrinsic dynamics of SARS-CoV-2, SARS-CoV and MERS-CoV spike glycoprotein through normal mode analysis using anisotropic network model11
Therapeutic potential of oxo-triarylmethyl (oxTAM) as a targeted drug delivery system for nitrosourea and fluorouracil anticancer drugs; A first principles insight11
A DFT investigation of lithium adsorption on graphenes as a potential anode material in lithium-ion batteries11
Pharmacophore modeling of JAK1: A target infested with activity-cliffs10
Push-pull nitronates in the [3+2] cycloaddition with nitroethylene: Molecular Electron Density Theory study10
Examining the interactions scorpion venom peptides (HP1090, Meucin-13, and Meucin-18) with the receptor binding domain of the coronavirus spike protein to design a mutated therapeutic peptide10
Molecular dynamics investigation of non-ionic deep eutectic solvents10
(3 + 2) cycloaddition reaction of 7-isopropylidenebenzonorbornadiene and diazomethane derivatives: A theoretical study10
Surface hydration and preferential interaction directs the charged amino acids-induced changes in protein stability10
Virtual screening and free energy estimation for identifying Mycobacterium tuberculosis flavoenzyme DprE1 inhibitors10
Recent progress on the synthesis, properties and applications of antimonene - A mini-review10
Influence of curcumin and rosmarinic acid on disrupting the general properties of Alpha-Synuclein oligomer: Molecular dynamics simulation10
Divulging the various chemical reactivity of trifluoromethyl-4-vinyl-benzene as well as methyl-4-vinyl-benzene in [3+2] cycloaddition reactions10
Estimation of the ligand-binding free energy of checkpoint kinase 1 via non-equilibrium MD simulations10
Enhancing NLO performance by utilizing tyrian purple dye as donor moiety in organic DSSCs with end capped acceptors: A theoretical study10
Performance comparison of wavelet neural network and adaptive neuro-fuzzy inference system with small data sets10
Structure and dynamics of hydrophobic deep eutectic solvents composed from terpene-fatty acids investigated by molecular dynamics simulation10
Ligand-based G Protein Coupled Receptor pharmacophore modeling: Assessing the role of ligand function in model development10
On the mechanical properties and fracture analysis of polymer nanocomposites reinforced by functionalized silicon carbide nanotubes: A molecular dynamics investigation10
In silico approach for identifying natural lead molecules against SARS-COV-210
Tuning the optoelectronic properties of superalkali doped phosphorene10
Insights into the mechanism of inhibition of phospholipase A2 by resveratrol: An extensive molecular dynamics simulation and binding free energy calculation10
Identification of Berbamine, Oxyacanthine and Rutin from Berberis asiatica as anti-SARS-CoV-2 compounds: An in silico study10
Mechanism of phenol and p-nitrophenol adsorption on kaolinite surface in aqueous medium: A molecular dynamics study10
Adsorption study of lac dyes with chitosan coated on silk fibroin using molecular dynamics simulations9
The influence of π-linkers configuration on properties of 10-hexylphenoxazine donor-based sensitizer for dye-sensitized solar cell application – Theoretical approach9
Remarkable non-linear optical properties of gold cluster doped graphyne (GY): A DFT study9
Destabilization of the Alzheimer’s amyloid-β protofibrils by THC: A molecular dynamics simulation study9
Molecular size and molecular structure: Discriminating their changes upon chemical reactions in terms of information entropy9
Enhancement of absorption capacity, optical and non-linear optical properties of graphene oxide nanosheet9
Molecular simulation of Cu, Ag, and Au-decorated Si-doped graphene quantum dots (Si@QD) nanostructured as sensors for SO2 trapping9
Binding affinity prediction for antibody–protein antigen complexes: A machine learning analysis based on interface and surface areas9
Prediction of protein ubiquitination sites via multi-view features based on eXtreme gradient boosting classifier9
Structures, binding energies and non-covalent interactions of furan clusters9
New equiatomic quaternary Heusler compounds without transition metals KCaBX (X = S and Se): Robust half-metallicity and optical properties9
Graph convolutional neural network applied to the prediction of normal boiling point9
In silico identification of SARS-CoV-2 cell entry inhibitors from selected natural antivirals9
Regio- and stereoselectivity of the [3+2] cycloaddition of nitrones with methyl-acetophenone: A DFT investigation9
A molecular interaction field describing nonconventional intermolecular interactions and its application to protein–ligand interaction prediction9
The influence of Stone-Wales defects in nanographene on the performance of Na-ion batteries9
Interaction of epoxy-based hydrogels and water: A molecular dynamics simulation study9
QSAR models for the fumigant activity prediction of essential oils9
Effects of oscillating electric fields on conotoxin peptide conformation: A molecular dynamic simulation study9
In silico selectivity modeling of pyridine and pyrimidine based CYP11B1 and CYP11B2 inhibitors: A case study9
Ultrasonic waves effect on S-shaped β-amyloids conformational dynamics by non-equilibrium molecular dynamics8
Searching for AChE inhibitors from natural compounds by using machine learning and atomistic simulations8
Molecular dynamics study of tensile behaviour for cold and linear friction welded single crystal tungsten8
Theoretical study on the decomposition mechanism of bisphenol A polycarbonate induced by the combined effect of humidity and UV irradiation8
Solute-solvent interaction and DFT studies on bromonaphthofuran 1,3,4-oxadiazole fluorophores for optoelectronic applications8
Molecular dynamics simulation of the adsorption properties of graphene oxide/graphene composite for alkali metal ions8
Applying frequency chaos game representation with perceptual image hashing to gene sequence phylogenetic analyses8
In silico characterization of adipokinetic hormone receptor and screening for pesticide candidates against stick insect, Carausius morosus8
Second-order NLO properties and two-state switching effects of transition metal redox complexes of iron and cobalt: A DFT study8
Efficient separation of He/CH4 mixture by functionalized graphenylene membranes: A theoretical study8
Fibril fragments from the amyloid core of lysozyme: An accelerated molecular dynamics study8
Methylammonium lead triiodide perovskite-based solar cells efficiency: Insight from experimental and simulation8
Identification of new alpha-synuclein fibrillogenesis inhibitor using in silico structure-based virtual screening8
Computational study of the effect of functionalization on natural gas components separation and adsorption in NUM-3a MOF8
Quantum chemical investigation of Z-shaped heptazethrenes derivatives with detailed structural parameters and singlet fission for photovoltaic applications8
In silico and in vitro mapping of specificity patterns of glycosaminoglycans towards cysteine cathepsins B, L, K, S and V8
Prediction of the potential biological activity of novel spiropyrazolo[3,4-b]pyridines and spiropyrazolo[3,4-b]pyridine-5,5′-pyrimidines by a ligand–protein inverse-docking approach8
Identification of potent food constituents as SARS-CoV-2 papain-like protease modulators through advanced pharmacoinformatics approaches8
Manufacture of different oxides with high uniformity for copper zinc tin sulfide (CZTS) based solar cells8
Molecular insights into the selective binding mechanism targeting parallel human telomeric G-quadruplex8
Heterogeneous nucleation of argon vapor on the nanostructure surface with molecular dynamics simulation8
An extensive computational study to identify potential inhibitors of Acyl-homoserine-lactone synthase from Acinetobacter baumannii (strain AYE)8
The role of in Silico/DFT investigations in analyzing dye molecules for enhanced solar cell efficiency and reduced toxicity8
The mechanism of the reaction between MAO and TMA: DFT study of the electronic structure and characterization of transition states for [AlOMe]6, [AlOMe]9 and [AlOMe]16 cages8
MolRoPE-BERT: An enhanced molecular representation with Rotary Position Embedding for molecular property prediction8
Molecular dynamics simulation of edge crack propagation in single crystalline alpha quartz8
Chemical space and diversity of seaweed metabolite database (SWMD): A cheminformatics study8
Rational design of BODIPY-carbazole analogues in the context of D-π-A approach for facile charge transport: A DFT/TD-DFT study8
Molecular dynamics study of conformation transition from helix to sheet of Aβ42 peptide8
Modelling of short synthetic antifreeze peptides: Insights into ice-pinning mechanism8
Interaction of Cun, Agn and Aun (n = 1–4) nanoparticles with ChCl:Urea deep eutectic solvent7
Transcription factor NF-κB as target for SARS-CoV-2 drug discovery efforts using inflammation-based QSAR screening model7
Highlighting the effect of amyloid beta assemblies on the mechanical properties and conformational stability of cell membrane7
Exploring sodium glucose cotransporter (SGLT2) inhibitors with machine learning approach: A novel hope in anti-diabetes drug discovery7
The impact of aromatic π-spacers and internal acceptors in triphenylamine dyes for DSSCs: A DFT approach7
Achieving controllable multifunctionality through layer sliding7
An investigation of halogen induced improvement of β12 borophene for Na/Li storage by density functional theory7
Computational study of the interaction of heavy metal ions, Cd(II), Hg(II), and Pb(II) on lignin matrices7
Symmetric vs. asymmetric: Which one is the better molecular configuration for achieving robust NLO response?7
An integrated computational investigation to unveil the structural impacts of mutation on the InhA structural gene of Mycobacterium tuberculosis7
A comprehensive tool for accurate identification of methyl-Glutamine sites7
Evaluation of the Morse potential function coefficients for germanene by the first principles approach7
Computational investigation of potent inhibitors against SARS-CoV-2 2′-O-methyltransferase (nsp16): Structure-based pharmacophore modeling, molecular docking, molecular dynamics simulations and bindin7
A novel alignment-free DNA sequence similarity analysis approach based on top-k n-gram match-up7
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