Journal of Biomedical Optics

Article	Citations
Intraoperative characterization of cardiac tissue: the potential of light scattering spectroscopy	53
Comparative analysis of intraoperative thermal and optical imaging for identification of the human primary sensory cortex	50
Structured light imaging mesoscopy: detection of embedded morphological changes in superficial tissues	47
Effects of phantom microstructure on their optical properties	47
Remote and low-cost intraocular pressure monitoring by deep learning of speckle patterns	39
Automatic correction of motion artifact in dynamic contrast-enhanced fluorescence imaging during open orthopedic surgery	36
Dual division of focal plane polarimeters-based collinear reflection Mueller matrix fast imaging microscope	36
ALA-based photodynamic priming in murine skin increases blood flow and oxygenation	36
Wide dynamic range measurement of blood flow in vivo using laser speckle contrast imaging	34
Assessment of nonalcoholic fatty liver function by photoacoustic imaging	30
Improved spatial speckle contrast model for tissue blood flow imaging: effects of spatial correlation among neighboring camera pixels	29
Er:YAG laser biofilm removal from zero-gap periodontal/peri-implant model system mimicking clinical attachment loss	27
Blood component analysis using mid-infrared photoacoustic spectroscopy based on ultrasound detection: glucose analysis trial	27
In vivo hamster cheek pouch subepithelial ablation, biomaterial injection, and localization: pilot study	27
Generalized 3D registration algorithm for enhancing retinal optical coherence tomography images	25
Stain-free enucleation of mouse and human oocytes with a 1033 nm femtosecond laser	24
Approaching closed spherical, full-view detection for photoacoustic tomography	24
Monte Carlo simulation of the effect of melanin concentration on light–tissue interactions for transmittance pulse oximetry measurement	24
Special Section Guest Editorial: Introduction to the Special Section Celebrating 30 years of Open Source Monte Carlo Codes in Biomedical Optics	23
Meshless Monte Carlo radiation transfer method for curved geometries using signed distance functions	23
Polarization-insensitive optical coherence tomography using pseudo-depolarized reference light for mitigating birefringence-related image artifacts	22
Hyperspectral imaging of 4T1 mammary carcinomas grown in dorsal skinfold window chambers: spectral renormalization and fluorescence modeling	22
Multiplexed optical fiber cell temperature sensing system with high sensitivity and accuracy	22
Depolarization diagrams for circularly polarized light scattering for biological particle monitoring	21
Spectral correction of light emitting diodes enables accurate hydration ratio calculation using narrowband diffuse reflectance spectroscopy	21

High-sensitivity dynamic diffuse fluorescence tomography system for fluorescence pharmacokinetics	21
Difference imaging from single measurements in diffuse optical tomography: a deep learning approach	21
Enhanced resolution optoacoustic microscopy using a picosecond high repetition rate Q-switched microchip laser	20
Automatic detection of head and neck squamous cell carcinoma on histologic slides using hyperspectral microscopic imaging	20
Tissue harvest with a laser microbiopsy (Erratum)	20
All-reflective tethered capsule endoscope for multimodal optical coherence tomography in the esophagus	20
Solid optical tissue phantom tools based on upconverting nanoparticles for biomedical applications	20
Multimodal microscope for optical coherence microscopy, tomography, vibrometry, and two-photon microscopy in the living mouse cochlea	19
Impact of signal-to-noise ratio and contrast definition on the sensitivity assessment and benchmarking of fluorescence molecular imaging systems	19
Real-time tracking of a diffuse reflectance spectroscopy probe used to aid histological validation of margin assessment in upper gastrointestinal cancer resection surgery	19
Assessing spectral effectiveness in color fundus photography for deep learning classification of retinopathy of prematurity	19
Spatial analysis of polarimetric images to enhance near-surface sampling sensitivity: feasibility in demineralized teeth and other tissue-like media	19
Photoacoustic imaging plus X: a review	18
Influence of optical aberrations on depth-specific spatial frequency domain techniques	18
Deep learning-based optical approach for skin analysis of melanin and hemoglobin distribution	18
Two-step verification method for Monte Carlo codes in biomedical optics applications	18
Minimizing near-infrared autofluorescence in preclinical imaging with diet and wavelength selection	18
Noise insensitive volumetric fusion method for enhanced photoacoustic microscopy	17
Retrieval of chromophore concentration changes in a digital human head model using analytical mean partial pathlengths of photons	17
Laser absorption spectroscopy measurements of different pulmonary oxygen gas concentrations in transmittance and remittance geometry: phantom study	17
Deep structural brain imaging via computational three-photon microscopy	17
Scattering angle resolved optical coherence tomography measures morphological changes in Bacillus subtilis colonies	17
Emerging uses of 5-aminolevulinic-acid-induced protoporphyrin IX in medicine: a review of multifaceted, ubiquitous, molecular diagnostic, therapeutic, and theranostic opportunities	16
Comparison of minimal detectable protoporphyrin IX concentrations with a loupe device and conventional 5-ALA fluorescence microscopy: an experimental study	16
Automatic granular and spinous epidermal cell identification and analysis on in vivo reflectance confocal microscopy images using cell morphological features	15
Evaluating clinical near-infrared surgical camera systems with a view to optimizing operator and computational signal analysis	15
CellSNAP: a fast, accurate algorithm for 3D cell segmentation in quantitative phase imaging	15
Noise-robust phase-space deconvolution for light-field microscopy	15
Automated three-dimensional image registration for longitudinal photoacoustic imaging	15
Photoacoustic imaging on its way toward clinical utility: a tutorial review focusing on practical application in medicine	15
Conversion of imager-specific response to tissue phantom fluorescence into system of units-traceable units	15
Characterization of bacteria swarming effect under plasmonic optical fiber illumination	15
Direct three-dimensional segmentation of prostate glands with nnU-Net	15
Multi-exposure speckle imaging through an optical fiber bundle	14
Development of a shortwave infrared sinuscope for the detection of cerebrospinal fluid leaks	14
Hybrid CNN–transformer demosaicing for bioinspired single-chip color-near-infrared fluorescence imaging in oncologic surgery	14
MCDataset: a public reference dataset of Monte Carlo simulated quantities for multilayered and voxelated tissues computed by massively parallel PyXOpto Python package	14
Deep learning-based spectroscopic single-molecule localization microscopy	13
Characterizing factors influencing calibration and optical property determination in quantitative reflectance spectroscopy to improve standardization	13
Optical coherence tomography–enabled classification of the human venoatrial junction	13
Evaluating backscattering polarized light imaging microstructural mapping capabilities through neural tissue and analogous phantom imaging	13
LED-based multicolor extended resolution transmission fluorescence microscopy	13
Dual-modality fluorescence lifetime imaging-optical coherence tomography intravascular catheter system with freeform catheter optics	13
Intravital photoacoustic brain stimulation with high-precision	13
Reflective optical imaging for scattering medium using chaotic laser	13
Lightweight and precise cell classification based on holographic tomography-derived refractive index point cloud	13
Perspective on the optics of medical imaging	13
Depth distributions of bacteria for the Pseudomonas aeruginosa-infected burn wounds treated by methylene blue-mediated photodynamic therapy in rats: effects of additives to photosensitizer	13
Label-free imaging flow cytometry for cell classification based directly on multiple off-axis holographic projections	13
Flexible catheter optical coherence tomography of the porcine middle ear via the Eustachian tube using a 3D-printed reflective objective	13

Development of breast-mimicking phantoms for use in optical coherence elastography	13
Light-sheet autofluorescence lifetime imaging with a single-photon avalanche diode array	12
Multiphoton microscopy for label-free multicolor imaging of peripheral nerve	12
Design and validation of a high-speed hyperspectral laparoscopic imaging system	12
Restoration of metabolic functional metrics from label-free, two-photon human tissue images using multiscale deep-learning-based denoising algorithms	12
Clinical PDT dose dosimetry for pleural Photofrin-mediated photodynamic therapy	12
Impact of sample handling protocols on soft tissue attenuation coefficient and morphology	12
Toward fluorescence digital twins: multi-parameter experimental validation of fluorescence Monte Carlo simulations using solid phantoms	12
Utilizing convolutional neural networks for discriminating cancer and stromal cells in three-dimensional cell culture images with nuclei counterstain	12
Effects of patient-specific treatment planning on eligibility for photodynamic therapy of deep tissue abscess cavities: retrospective Monte Carlo simulation study	12
Assessment of open-field fluorescence guided surgery systems: implementing a standardized method for characterization and comparison	12
New Year, New JBO Editor-in-Chief	12
Scaling down the dimensions of a Fabry–Perot polymer film acoustic sensor for photoacoustic endoscopy	12
Incremental residual polarization caused by aging in human skin	11
Enhanced neuroimaging with a calcium sensor in ex-vivo Drosophila melanogaster brains using closed-loop adaptive optics light-sheet fluorescence microscopy	11
Depth-dependent fluence compensation without a priori knowledge of tissue composition for quantitative ultrasound-guided photoacoustic imaging	11
Two-stage classification strategy for breast cancer diagnosis using ultrasound-guided diffuse optical tomography and deep learning	11
Two-stage diffuse fluorescence tomography for monitoring of drug distribution in photodynamic therapy of tumors	11
Influence mechanism of the temporal duration of laser irradiation on photoacoustic technique: a review	11
Perspectives in Biophotonics: a special issue in honor of the International Graduate Summer School on Biophotonics	11
Asynchronous optical coherence elastography and directional phase gradient analysis	11
Wavefront shaping improves the transparency of the scattering media: a review (Publisher’s Note)	11
Terahertz Mie scattering in tissue: diffuse polarimetric imaging and Monte Carlo validation in highly attenuating media models	11
Motion-resistant three-wavelength spatial frequency domain imaging system with ambient light suppression using an 8-tap CMOS image sensor	11
Monte Carlo simulation platform for laser Doppler flowmetry	11
Imaging the ex-vivo human cochlea using 1.3-μm and 1.7-μm optical coherence tomography	11
Comparison of diffuse correlation spectroscopy analytical models for measuring cerebral blood flow in adults	11
Non-invasive assessment of sublingual microcirculation using flow derived from green light PPG: evaluation and reference values	11
Motion-artifact-free single shot two-beam optical coherence elastography system	11
Detection of live breast cancer cells in bright-field microscopy images containing white blood cells by image analysis and deep learning	11
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using a tilted fiber-optic probe in diffuse reflectance spectroscopy, part 1: a theoretical framework for	10
Relationship between depth-wise refractive index and biomechanical properties of human articular cartilage	10
Photoacoustic and fluorescence dual-modality imaging of cerebral biomarkers in Alzheimer’s disease rodent model	10
Hyperspectral dark-field microscopy of human breast lumpectomy samples for tumor margin detection in breast-conserving surgery	10
Noninvasive holographic sensor system for measuring stiffness of soft micro samples	10
Exploring near-infrared autofluorescence properties in parathyroid tissue: an analysis of fresh and paraffin-embedded thyroidectomy specimens	10
Mouthwash as a non-invasive method of indocyanine green delivery for near-infrared fluorescence dental imaging	10
Toward the development of a polarimetric tool to diagnose the fibrotic human ventricular myocardium	10
Honoring Lihong V. Wang, a pioneer in biomedical optics	10
Noninvasive continuous blood pressure prediction using FlexNIRS and machine learning during carotid endarterectomy	10
Transmission infrared micro-spectroscopic study of individual human hair	9
Structurally constrained and pathology-aware convolutional transformer generative adversarial network for virtual histology staining of human coronary optical coherence tomography images	9
HyperTRCSS: A hyperspectral time-resolved compressive sensing spectrometer for depth-sensitive monitoring of cytochrome-c-oxidase and blood oxygenation	9
Two-color fluorescence-guided surgery for head and neck cancer resections	9
Off-axis digital lensless holographic microscopy based on spatially multiplexed interferometry	9
Deep-learning approach to stratified reconstructions of tissue absorption and scattering in time-domain spatial frequency domain imaging	9
Near-infrared light-induced transcranial photobiomodulation enhances the visual pathway’s function in healthy volunteers	9
Field programmable gate array compression for large array multispeckle diffuse correlation spectroscopy	9
Mapping functional hemodynamic and metabolic responses to dementia: a broadband spectroscopy pilot study	9
Evaluating blue light impact on reconstructed human epidermis using laser speckle imaging	9
Hardware-software co-design of an open-source automatic multimodal whole slide histopathology imaging system	9
Quantitative evaluation of the site-dependent cell viability in three-dimensional hepatocyte spheroids based on dynamic optical coherence tomography	9
Age-related changes in diffuse optical tomography sensitivity profiles from childhood to adulthood	9
Development and preclinical evaluation of an endonasal Raman spectroscopy probe for transsphenoidal pituitary adenoma surgery	9
Förster resonance energy transfer efficiency measurements on vinculin tension sensors at focal adhesions using a simple and cost-effective setup	9
Multiresolution nondestructive 3D pathology of whole lymph nodes for breast cancer staging	9
Perspective on the use of fluorescence molecular imaging for peripheral and deep en face margin assessment	9
Photoplethysmographic imaging and analysis of pulsatile pressure wave in palmar artery at 10 wavelengths	9
Learnable real-time inference of molecular composition from diffuse spectroscopy of brain tissue	9
Wavefront shaping improves the transparency of the scattering media: a review	9
Remote sensing of alcohol consumption using machine learning speckle pattern analysis	9
DOT-AE-GAN: a hybrid autoencoder–GAN model for enhanced ultrasound-guided diffuse optical tomography reconstruction	9
Diffuse optical tomography system for acute traumatic brain injury in the intensive care unit: a prospective study on healthy volunteers	8
AI-powered remote monitoring of brain responses to clear and incomprehensible speech via speckle pattern analysis	8
Skin chromophore mapping by smartphone RGB camera under spectral band and spectral line illumination	8
3D photogrammetry quantifies the size of basal cell carcinoma lesions with submillimeter accuracy: high correlation with lesion response to photodynamic therapy	8
Polydimethylsiloxane tissue-mimicking phantoms with tunable optical properties	8
Deep learning segmentation of periarterial and perivenous capillary-free zones in optical coherence tomography angiography	8
Hyperspectral imaging in neurosurgery: a review of systems, computational methods, and clinical applications	8
Patient-specific arterial input function for accurate perfusion assessment in intraoperative fluorescence imaging	8
Real-time identification of life-threatening necrotizing soft-tissue infections using indocyanine green fluorescence imaging	8
Depth detection limit of a fluorescent object in tissue-like medium with background emission in continuous-wave measurements: a phantom study	8
Comprehensive framework of GPU-accelerated image reconstruction for photoacoustic computed tomography	8
Multi-laboratory performance assessment of diffuse optics instruments: the BitMap exercise	8
Fast and robust Fourier ptychographic microscopy with position misalignment correction	8
Single-distance and dual-slope frequency-domain near-infrared spectroscopy to assess skeletal muscle hemodynamics	8
Monte Carlo simulation of spatial frequency domain imaging for breast tumors during compression	8
Combined optical-electromechanical wearable sensors for cardiac health monitoring	8
Robust, high-density lesion mapping in the left atrium with near-infrared spectroscopy	8
Femtosecond laser-assisted selective holding with ultra-low power for direct manipulation of biological species	8

Two-photon scanned light sheet fluorescence microscopy with axicon imaging for fast volumetric imaging	7
Elucidating the effect of tumor and background region-of-interest selection on the performance metrics used to assess fluorescence imaging	7
Adaptive correction method of hybrid aberrations in Fourier ptychographic microscopy	7
Convolutional neural network advances in demosaicing for fluorescent cancer imaging with color–near-infrared sensors	7
Quantitative phase imaging techniques for measuring scattering properties of cells and tissues: a review—part I	7
Impact of corpus callosum fiber tract crossing on polarimetric images of human brain histological sections: ex vivo studies in transmission configuration	7
Basis function model to extract the combined confocal and fall-off function from multiple optical coherence tomography A-scans	7
Label-free quantitative measurement of cardiovascular dynamics in a zebrafish embryo using frequency-comb-referenced-quantitative phase imaging	7
Deep-learning-based cross-modality translation from Stokes image to bright-field contrast	7
Detection properties of indium-111 and IRDye800CW for intraoperative molecular imaging use across tissue phantom models	7
Cherenkov light emission in external beam radiation therapy of the larynx	7
Optimizing optical coherence tomography to detect occult spermatozoa in rat testis after induced non-obstructive azoospermia	7
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using tilted fiber-optic probe diffuse reflectance spectroscopy, part 2: probe design, realization, and ex	7
Targeted multispectral filter array design for the optimization of endoscopic cancer detection in the gastrointestinal tract	7
Convolutional neural network-based regression analysis to predict subnuclear chromatin organization from two-dimensional optical scattering signals	7
Combined frequency domain near-infrared spectroscopy and diffuse correlation spectroscopy system for comprehensive metabolic monitoring of inspiratory muscles during loading	7
Detection of breast cancer using machine learning on time-series diffuse optical transillumination data	7
Systematic comparison of fluorescence imaging in the near-infrared and shortwave-infrared spectral range using clinical tumor samples containing cetuximab-IRDye800CW	7
In vivo tumor imaging of pre-clinical models via reflection-mode measurements of circular degree of polarization	7
Improved U-net-based leukocyte segmentation method	7
Model for the diffuse reflectance in spatial frequency domain imaging (Erratum)	7
Customizable optical tissue phantom platform for characterization of fluorescence imaging device sensitivity	7
Polarized hyperspectral microscopic imaging system for enhancing the visualization of collagen fibers and head and neck squamous cell carcinoma	6
JBO 2024 List of Reviewers	6
Transport-of-intensity phase imaging using commercially available confocal microscope	6
Tetherless miniaturized point detector device for monitoring cortical surface hemodynamics in mice	6
Fluid mechanics approach to analyzing collagen fiber organization	6
Large field-of-view short-wave infrared metalens for scanning fiber endoscopy	6
Can diffuse reflectance spectroscopy identify shuntodynia in pediatric hydrocephalus patients?	6
Ninety years of pulse oximetry: history, current status, and outlook	6
Optofluidic flow meter for sub-nanoliter per minute flow measurements	6
Efficient quality control of platelet-rich plasma preparation using computer vision and deep learning	6
Robust lumen segmentation based on temporal residual U-Net using spatiotemporal features in intravascular optical coherence tomography images	6
Subsurface fluorescence time-of-flight imaging using a large-format single-photon avalanche diode sensor for tumor depth assessment	6
Fiftieth anniversary of fiber optic–based fluorometry of brain mitochondrial NADH redox state monitored in vivo	6
Accuracy and precision of depth-resolved estimation of attenuation coefficients in optical coherence tomography	6
Special Section Guest Editorial: Tissue Phantoms to Advance Biomedical Optical Systems	6
Multivariate analysis of breast tissue using optical parameters extracted from a combined time-resolved fluorescence and diffuse reflectance system for tumor margin detection	6
Spectral analysis of multiple scattering factors of turbid media for glucose measurement using near-infrared spectroscopy	6
Reconstruction of fluorophore absorption and fluorescence lifetime using early photon mesoscopic fluorescence molecular tomography: a phantom study	6
Improving diffuse optical tomography imaging quality using APU-Net: an attention-based physical U-Net model	6
Using Fourier ptychography microscopy to achieve high-resolution chromosome imaging: an initial evaluation	6
Compact and ultracompact spectral imagers: technology and applications in biomedical imaging	6
Kernel Flow: a high channel count scalable time-domain functional near-infrared spectroscopy system	6
Analysis of muscle tissue in vivo using fiber-optic autofluorescence and diffuse reflectance spectroscopy	6
Increased fluorescence observation intensity during the photodynamic diagnosis of deeply located tumors by fluorescence photoswitching of protoporphyrin IX	6
Margin assessment during breast conserving surgery using diffuse reflectance spectroscopy	6
Depth-dependent attenuation and backscattering characterization of optical coherence tomography by stationary iterative method	6
Light-guided dynamic phantom to mimic microvasculature for biomedical applications: an exploration for pulse oximeter	6
X-ray Cherenkov-luminescence tomography reconstruction with a three-component deep learning algorithm: Swin transformer, convolutional neural network, and locality module	6
Near-infrared imaging of head and neck squamous cell carcinoma using indocyanine green that targets the αvβ6 peptide	6
Self-calibrated pulse oximetry algorithm based on photon pathlength change and the application in human freedivers	6
Water and hemoglobin modulated gelatin-based phantoms to spectrally mimic inflamed tissue in the validation of biomedical techniques and the modeling of microdialysis data	6
Macroscopic inelastic scattering imaging using a hyperspectral line-scanning system identifies invasive breast cancer in lumpectomy and mastectomy specimens	6
Machine learning–based classification of spatially resolved diffuse reflectance and autofluorescence spectra acquired on human skin for actinic keratoses and skin carcinoma diagnostics aid	6
Compact and cost-effective laser-powered speckle contrast optical spectroscopy fiber-free device for measuring cerebral blood flow	6
Integration of cellular-resolution optical coherence tomography and Raman spectroscopy for discrimination of skin cancer cells with machine learning	6
Improved in vivo optical coherence tomography imaging of animal peripheral nerves using a prism nerve holder	6
Acoustic resolution photoacoustic Doppler flowmetry for assessment of patient rectal cancer blood perfusion	6
Looking deep inside tissue with photoacoustic molecular probes: a review	6
Measuring and imaging of transcutaneous bilirubin, hemoglobin, and melanin based on diffuse reflectance spectroscopy	6