Journal of Biomedical Optics

Article	Citations
Intraoperative characterization of cardiac tissue: the potential of light scattering spectroscopy	125
Optimization of in vivo Cherenkov imaging dosimetry via spectral choices for ambient background lights and filtering	90
In vivo hamster cheek pouch subepithelial ablation, biomaterial injection, and localization: pilot study	73
Assessment of nonalcoholic fatty liver function by photoacoustic imaging	54
Automatic correction of motion artifact in dynamic contrast-enhanced fluorescence imaging during open orthopedic surgery	44
Single acquisition label-free histology-like imaging with dual-contrast photoacoustic remote sensing microscopy	44
Effects of phantom microstructure on their optical properties	40
Comparative analysis of intraoperative thermal and optical imaging for identification of the human primary sensory cortex	39
Er:YAG laser biofilm removal from zero-gap periodontal/peri-implant model system mimicking clinical attachment loss	36
Approaching closed spherical, full-view detection for photoacoustic tomography	35
Wide dynamic range measurement of blood flow in vivo using laser speckle contrast imaging	33
Remote and low-cost intraocular pressure monitoring by deep learning of speckle patterns	32
Generalized 3D registration algorithm for enhancing retinal optical coherence tomography images	32
Evaluation of visible diffuse reflectance spectroscopy in liver tissue: validation of tissue saturations using extracorporeal circulation	29
Dual division of focal plane polarimeters-based collinear reflection Mueller matrix fast imaging microscope	29
Looking for a perfect match: multimodal combinations of Raman spectroscopy for biomedical applications	29
Bimodal multispectral imaging system with cloud-based machine learning algorithm for real-time screening and detection of oral potentially malignant lesions and biopsy guidance	27
Monte Carlo simulation of the effect of melanin concentration on light–tissue interactions for transmittance pulse oximetry measurement	26
Extracellular pH affects the fluorescence lifetimes of metabolic co-factors	23
Improved spatial speckle contrast model for tissue blood flow imaging: effects of spatial correlation among neighboring camera pixels	23
Special Section Guest Editorial: Introduction to the Special Section Celebrating 30 years of Open Source Monte Carlo Codes in Biomedical Optics	23
Meshless Monte Carlo radiation transfer method for curved geometries using signed distance functions	23
Two-step verification method for Monte Carlo codes in biomedical optics applications	22
Solid optical tissue phantom tools based on upconverting nanoparticles for biomedical applications	21
Spectral correction of light emitting diodes enables accurate hydration ratio calculation using narrowband diffuse reflectance spectroscopy	21

Stain-free enucleation of mouse and human oocytes with a 1033 nm femtosecond laser	21
Deep learning-based optical approach for skin analysis of melanin and hemoglobin distribution	20
Mobile-based oral cancer classification for point-of-care screening	20
Impact of illumination spectrum and eye pigmentation on image quality from a fundus camera using transscleral illumination	20
Automatic detection of head and neck squamous cell carcinoma on histologic slides using hyperspectral microscopic imaging	20
Tissue harvest with a laser microbiopsy (Erratum)	20
Depolarization diagrams for circularly polarized light scattering for biological particle monitoring	19
Multiplexed optical fiber cell temperature sensing system with high sensitivity and accuracy	18
High-sensitivity dynamic diffuse fluorescence tomography system for fluorescence pharmacokinetics	18
Difference imaging from single measurements in diffuse optical tomography: a deep learning approach	17
Impact of signal-to-noise ratio and contrast definition on the sensitivity assessment and benchmarking of fluorescence molecular imaging systems	17
Polarization-insensitive optical coherence tomography using pseudo-depolarized reference light for mitigating birefringence-related image artifacts	17
Enhanced resolution optoacoustic microscopy using a picosecond high repetition rate Q-switched microchip laser	17
Real-time tracking of a diffuse reflectance spectroscopy probe used to aid histological validation of margin assessment in upper gastrointestinal cancer resection surgery	17
Hyperspectral imaging of 4T1 mammary carcinomas grown in dorsal skinfold window chambers: spectral renormalization and fluorescence modeling	17
All-reflective tethered capsule endoscope for multimodal optical coherence tomography in the esophagus	17
Incorporating early and late-arriving photons to improve the reconstruction of cerebral hemodynamic responses acquired by time-resolved near-infrared spectroscopy	16
Photoacoustic imaging plus X: a review	16
Minimizing near-infrared autofluorescence in preclinical imaging with diet and wavelength selection	16
Influence of optical aberrations on depth-specific spatial frequency domain techniques	16
Assessing spectral effectiveness in color fundus photography for deep learning classification of retinopathy of prematurity	16
Spatial analysis of polarimetric images to enhance near-surface sampling sensitivity: feasibility in demineralized teeth and other tissue-like media	16
Quantitative dynamic near-infrared fluorescence imaging using indocyanine green for analysis of bowel perfusion after mesenteric resection	15
Noise insensitive volumetric fusion method for enhanced photoacoustic microscopy	15
Scattering angle resolved optical coherence tomography measures morphological changes in Bacillus subtilis colonies	15
Automated three-dimensional image registration for longitudinal photoacoustic imaging	15
Characterization of bacteria swarming effect under plasmonic optical fiber illumination	15
Retrieval of chromophore concentration changes in a digital human head model using analytical mean partial pathlengths of photons	15
Comparison of minimal detectable protoporphyrin IX concentrations with a loupe device and conventional 5-ALA fluorescence microscopy: an experimental study	15
Laser absorption spectroscopy measurements of different pulmonary oxygen gas concentrations in transmittance and remittance geometry: phantom study	15
Evaluating clinical near-infrared surgical camera systems with a view to optimizing operator and computational signal analysis	14
Deep structural brain imaging via computational three-photon microscopy	14
Automatic granular and spinous epidermal cell identification and analysis on in vivo reflectance confocal microscopy images using cell morphological features	14
MCDataset: a public reference dataset of Monte Carlo simulated quantities for multilayered and voxelated tissues computed by massively parallel PyXOpto Python package	14
CellSNAP: a fast, accurate algorithm for 3D cell segmentation in quantitative phase imaging	14
Direct three-dimensional segmentation of prostate glands with nnU-Net	13
Conversion of imager-specific response to tissue phantom fluorescence into system of units-traceable units	13
Multiphoton microscopy for label-free multicolor imaging of peripheral nerve	13
Noise-robust phase-space deconvolution for light-field microscopy	13
Photoacoustic imaging on its way toward clinical utility: a tutorial review focusing on practical application in medicine	13
Imaging of enthesitis by an LED-based photoacoustic system (Erratum)	13
Optical coherence tomography–enabled classification of the human venoatrial junction	12
Characterizing factors influencing calibration and optical property determination in quantitative reflectance spectroscopy to improve standardization	12
Reflective optical imaging for scattering medium using chaotic laser	12
Effects of patient-specific treatment planning on eligibility for photodynamic therapy of deep tissue abscess cavities: retrospective Monte Carlo simulation study	12
Dual-modality fluorescence lifetime imaging-optical coherence tomography intravascular catheter system with freeform catheter optics	12
Intravital photoacoustic brain stimulation with high-precision	12
Label-free imaging flow cytometry for cell classification based directly on multiple off-axis holographic projections	12
Depth distributions of bacteria for the Pseudomonas aeruginosa-infected burn wounds treated by methylene blue-mediated photodynamic therapy in rats: effects of additives to photosensitizer	12
Design and validation of a high-speed hyperspectral laparoscopic imaging system	12

Development of a shortwave infrared sinuscope for the detection of cerebrospinal fluid leaks	12
Evaluating backscattering polarized light imaging microstructural mapping capabilities through neural tissue and analogous phantom imaging	12
Special Series Guest Editorial: Artificial Intelligence and Machine Learning in Biomedical Optics	12
Classification of imbalanced oral cancer image data from high-risk population	12
Perspective on the optics of medical imaging	11
Clinical PDT dose dosimetry for pleural Photofrin-mediated photodynamic therapy	11
Accurate and stable two-step LED position calibration method for Fourier ptychographic microscopy	11
Deep learning-based spectroscopic single-molecule localization microscopy	11
LED-based multicolor extended resolution transmission fluorescence microscopy	11
Assessment of open-field fluorescence guided surgery systems: implementing a standardized method for characterization and comparison	11
Light-sheet autofluorescence lifetime imaging with a single-photon avalanche diode array	11
Spatial frequency domain imager based on a compact multiaperture camera: testing and feasibility for noninvasive burn severity assessment	11
Restoration of metabolic functional metrics from label-free, two-photon human tissue images using multiscale deep-learning-based denoising algorithms	10
Motion-artifact-free single shot two-beam optical coherence elastography system	10
Two-stage diffuse fluorescence tomography for monitoring of drug distribution in photodynamic therapy of tumors	10
Wavefront shaping improves the transparency of the scattering media: a review (Publisher’s Note)	10
Hyperspectral dark-field microscopy of human breast lumpectomy samples for tumor margin detection in breast-conserving surgery	10
New Year, New JBO Editor-in-Chief	10
Non-invasive assessment of sublingual microcirculation using flow derived from green light PPG: evaluation and reference values	10
Influence mechanism of the temporal duration of laser irradiation on photoacoustic technique: a review	10
Enhanced neuroimaging with a calcium sensor in ex-vivo Drosophila melanogaster brains using closed-loop adaptive optics light-sheet fluorescence microscopy	10
Perspectives in Biophotonics: a special issue in honor of the International Graduate Summer School on Biophotonics	9
Incremental residual polarization caused by aging in human skin	9
Detection of live breast cancer cells in bright-field microscopy images containing white blood cells by image analysis and deep learning	9
Imaging the ex-vivo human cochlea using 1.3-μm and 1.7-μm optical coherence tomography	9
Reflection-mode acousto-optic imaging using plane wave ultrasound pulses	9
Evaluation of standardized performance test methods for biomedical Raman spectroscopy	9
Comparison of diffuse correlation spectroscopy analytical models for measuring cerebral blood flow in adults	9
Imaging in thick samples, a phased Monte Carlo radiation transfer algorithm	9
Utilizing convolutional neural networks for discriminating cancer and stromal cells in three-dimensional cell culture images with nuclei counterstain	9
Scaling down the dimensions of a Fabry–Perot polymer film acoustic sensor for photoacoustic endoscopy	9
Two-stage classification strategy for breast cancer diagnosis using ultrasound-guided diffuse optical tomography and deep learning	9
Motion-resistant three-wavelength spatial frequency domain imaging system with ambient light suppression using an 8-tap CMOS image sensor	9
Mouthwash as a non-invasive method of indocyanine green delivery for near-infrared fluorescence dental imaging	8
Depth detection limit of a fluorescent object in tissue-like medium with background emission in continuous-wave measurements: a phantom study	8
Remote sensing of alcohol consumption using machine learning speckle pattern analysis	8
Fiber-based photoacoustic remote sensing microscopy and spectral-domain optical coherence tomography with a dual-function 1050-nm interrogation source	8
Beer–Lambert law for optical tissue diagnostics: current state of the art and the main limitations	8
Exploring near-infrared autofluorescence properties in parathyroid tissue: an analysis of fresh and paraffin-embedded thyroidectomy specimens	8
Honoring Lihong V. Wang, a pioneer in biomedical optics	8
Structurally constrained and pathology-aware convolutional transformer generative adversarial network for virtual histology staining of human coronary optical coherence tomography images	8
Noninvasive holographic sensor system for measuring stiffness of soft micro samples	8
Learnable real-time inference of molecular composition from diffuse spectroscopy of brain tissue	8
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using a tilted fiber-optic probe in diffuse reflectance spectroscopy, part 1: a theoretical framework for	8
Off-axis digital lensless holographic microscopy based on spatially multiplexed interferometry	8
Development and preclinical evaluation of an endonasal Raman spectroscopy probe for transsphenoidal pituitary adenoma surgery	8
Wavefront shaping improves the transparency of the scattering media: a review	8
Photoplethysmographic imaging and analysis of pulsatile pressure wave in palmar artery at 10 wavelengths	8
Photoacoustic and fluorescence dual-modality imaging of cerebral biomarkers in Alzheimer’s disease rodent model	8
Transmission infrared micro-spectroscopic study of individual human hair	8
Age-related changes in diffuse optical tomography sensitivity profiles from childhood to adulthood	8
Two-color fluorescence-guided surgery for head and neck cancer resections	8
Relationship between depth-wise refractive index and biomechanical properties of human articular cartilage	8
Multiresolution nondestructive 3D pathology of whole lymph nodes for breast cancer staging	8
Field programmable gate array compression for large array multispeckle diffuse correlation spectroscopy	8
Deep-learning approach to stratified reconstructions of tissue absorption and scattering in time-domain spatial frequency domain imaging	8
Polydimethylsiloxane tissue-mimicking phantoms with tunable optical properties	8
HyperTRCSS: A hyperspectral time-resolved compressive sensing spectrometer for depth-sensitive monitoring of cytochrome-c-oxidase and blood oxygenation	8
Hardware-software co-design of an open-source automatic multimodal whole slide histopathology imaging system	8
Toward the development of a polarimetric tool to diagnose the fibrotic human ventricular myocardium	8
Quantitative evaluation of the site-dependent cell viability in three-dimensional hepatocyte spheroids based on dynamic optical coherence tomography	8
Förster resonance energy transfer efficiency measurements on vinculin tension sensors at focal adhesions using a simple and cost-effective setup	7
Monte Carlo simulation of spatial frequency domain imaging for breast tumors during compression	7
Real-time identification of life-threatening necrotizing soft-tissue infections using indocyanine green fluorescence imaging	7
Basis function model to extract the combined confocal and fall-off function from multiple optical coherence tomography A-scans	7
Targeted multispectral filter array design for the optimization of endoscopic cancer detection in the gastrointestinal tract	7
Detection of breast cancer using machine learning on time-series diffuse optical transillumination data	7
Method for measurement of collagen monomer orientation in fluorescence microscopy	7
Fast and robust Fourier ptychographic microscopy with position misalignment correction	7
Single-distance and dual-slope frequency-domain near-infrared spectroscopy to assess skeletal muscle hemodynamics	7
Perspectives on interstitial photodynamic therapy for malignant tumors	7
Minimally invasive intrathecal spinal cord imaging with optical coherence tomography	7
Patient-specific arterial input function for accurate perfusion assessment in intraoperative fluorescence imaging	7
Improved U-net-based leukocyte segmentation method	7
Quantitative phase imaging techniques for measuring scattering properties of cells and tissues: a review—part I	7
Impact of corpus callosum fiber tract crossing on polarimetric images of human brain histological sections: ex vivo studies in transmission configuration	7
Optofluidic flow meter for sub-nanoliter per minute flow measurements	7
Customizable optical tissue phantom platform for characterization of fluorescence imaging device sensitivity	7
Comprehensive framework of GPU-accelerated image reconstruction for photoacoustic computed tomography	7
Combined frequency domain near-infrared spectroscopy and diffuse correlation spectroscopy system for comprehensive metabolic monitoring of inspiratory muscles during loading	7

Femtosecond laser-assisted selective holding with ultra-low power for direct manipulation of biological species	7
Hyperspectral imaging in neurosurgery: a review of systems, computational methods, and clinical applications	7
Convolutional neural network-based regression analysis to predict subnuclear chromatin organization from two-dimensional optical scattering signals	7
Systematic comparison of fluorescence imaging in the near-infrared and shortwave-infrared spectral range using clinical tumor samples containing cetuximab-IRDye800CW	7
Model for the diffuse reflectance in spatial frequency domain imaging (Erratum)	7
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using tilted fiber-optic probe diffuse reflectance spectroscopy, part 2: probe design, realization, and ex	7
Label-free quantitative measurement of cardiovascular dynamics in a zebrafish embryo using frequency-comb-referenced-quantitative phase imaging	7
Deep-learning-based cross-modality translation from Stokes image to bright-field contrast	7
Multi-laboratory performance assessment of diffuse optics instruments: the BitMap exercise	7
Robust, high-density lesion mapping in the left atrium with near-infrared spectroscopy	7
Skin chromophore mapping by smartphone RGB camera under spectral band and spectral line illumination	7
Using Fourier ptychography microscopy to achieve high-resolution chromosome imaging: an initial evaluation	6
Water and hemoglobin modulated gelatin-based phantoms to spectrally mimic inflamed tissue in the validation of biomedical techniques and the modeling of microdialysis data	6
Ninety years of pulse oximetry: history, current status, and outlook	6
X-ray Cherenkov-luminescence tomography reconstruction with a three-component deep learning algorithm: Swin transformer, convolutional neural network, and locality module	6
Transport-of-intensity phase imaging using commercially available confocal microscope	6
Optimizing optical coherence tomography to detect occult spermatozoa in rat testis after induced non-obstructive azoospermia	6
Elucidating the effect of tumor and background region-of-interest selection on the performance metrics used to assess fluorescence imaging	6
Multivariate analysis of breast tissue using optical parameters extracted from a combined time-resolved fluorescence and diffuse reflectance system for tumor margin detection	6
Compact and ultracompact spectral imagers: technology and applications in biomedical imaging	6
Fluid mechanics approach to analyzing collagen fiber organization	6
Kernel Flow: a high channel count scalable time-domain functional near-infrared spectroscopy system	6
Subsurface fluorescence time-of-flight imaging using a large-format single-photon avalanche diode sensor for tumor depth assessment	6
Convolutional neural network advances in demosaicing for fluorescent cancer imaging with color–near-infrared sensors	6
Acoustic resolution photoacoustic Doppler flowmetry for assessment of patient rectal cancer blood perfusion	6
Self-calibrated pulse oximetry algorithm based on photon pathlength change and the application in human freedivers	6
Detection properties of indium-111 and IRDye800CW for intraoperative molecular imaging use across tissue phantom models	6
Adaptive correction method of hybrid aberrations in Fourier ptychographic microscopy	6
Reconstruction of fluorophore absorption and fluorescence lifetime using early photon mesoscopic fluorescence molecular tomography: a phantom study	6
Compact and cost-effective laser-powered speckle contrast optical spectroscopy fiber-free device for measuring cerebral blood flow	6
Analysis of muscle tissue in vivo using fiber-optic autofluorescence and diffuse reflectance spectroscopy	6
Integration of cellular-resolution optical coherence tomography and Raman spectroscopy for discrimination of skin cancer cells with machine learning	6
Sub-millimeter endoscope demonstrates feasibility of in vivo reflectance imaging, fluorescence imaging, and cell collection in the fallopian tubes	6
Macroscopic inelastic scattering imaging using a hyperspectral line-scanning system identifies invasive breast cancer in lumpectomy and mastectomy specimens	6
Two-photon scanned light sheet fluorescence microscopy with axicon imaging for fast volumetric imaging	6
Improved in vivo optical coherence tomography imaging of animal peripheral nerves using a prism nerve holder	6
Can diffuse reflectance spectroscopy identify shuntodynia in pediatric hydrocephalus patients?	6