Journal of Biomedical Optics

Article	Citations
Fiber-based photoacoustic remote sensing microscopy and spectral-domain optical coherence tomography with a dual-function 1050-nm interrogation source	99
Deep-learning approach to stratified reconstructions of tissue absorption and scattering in time-domain spatial frequency domain imaging	91
Looking for a perfect match: multimodal combinations of Raman spectroscopy for biomedical applications	76
Transcutaneous monitoring of hemoglobin derivatives during methemoglobinemia in rats using spectral diffuse reflectance	74
Characterization and identification of cell death dynamics by quantitative phase imaging	59
Investigation of image plane for image reconstruction of objects through diffusers via deep learning	58
Minimally invasive intrathecal spinal cord imaging with optical coherence tomography	51
Hyperspectral imaging with deep learning for quantification of tissue hemoglobin, melanin, and scattering	39
High-resolution lensless holographic microscopy using a physics-aware deep network	37
PoLambRimetry: a multispectral polarimetric atlas of lamb brain	34
Semisupervised representative learning for measuring epidermal thickness in human subjects in optical coherence tomography by leveraging datasets from rodent models	31
Corneal absorption spectra in the deep UV range	30
In vivo hamster cheek pouch subepithelial ablation, biomaterial injection, and localization: pilot study	29
Femtosecond laser-assisted selective holding with ultra-low power for direct manipulation of biological species	28
Discrimination of cancerous from benign pigmented skin lesions based on multispectral autofluorescence lifetime imaging dermoscopy and machine learning	26
Optimization of handheld spectrally encoded coherence tomography and reflectometry for point-of-care ophthalmic diagnostic imaging	26
Segmentation of the urothelium in optical coherence tomography images with dynamic contrast	26
Optimization of in vivo Cherenkov imaging dosimetry via spectral choices for ambient background lights and filtering	24
Improved intraoperative identification of close margins in oral squamous cell carcinoma resections using a dual aperture fluorescence ratio approach: first in-human results	23
Generalized 3D registration algorithm for enhancing retinal optical coherence tomography images	22
iStent insertion orientation and impact on trabecular meshwork motion resolved by optical coherence tomography imaging	22
Wavelength-specific optoacoustic-induced vibrations of the guinea pig tympanic membrane	22
TIE-GANs: single-shot quantitative phase imaging using transport of intensity equation with integration of GANs	22
Effects of phantom microstructure on their optical properties	21
Use of topical methylene blue to image nuclear morphometry with a low-cost scanning darkfield microendoscope	20

Design, implementation, and analysis of a compressed sensing photoacoustic projection imaging system	20
Real-time identification of life-threatening necrotizing soft-tissue infections using indocyanine green fluorescence imaging	19
Image-guided Raman spectroscopy navigation system to improve transperineal prostate cancer detection. Part 1: Raman spectroscopy fiber-optics system and in situ tissue characterization	19
Improved spatial speckle contrast model for tissue blood flow imaging: effects of spatial correlation among neighboring camera pixels	19
Förster resonance energy transfer efficiency measurements on vinculin tension sensors at focal adhesions using a simple and cost-effective setup	18
Optical manipulation: advances for biophotonics in the 21st century	18
Fast and robust Fourier ptychographic microscopy with position misalignment correction	17
Ultrasmall compact CMOS imaging system for bioluminescence reporter-based live gene expression analysis	17
Hierarchical decision model for in vitro bilirubin content prediction from absorption spectrum of whole blood	16
Wavefront shaping improves the transparency of the scattering media: a review	16
Multiparameter interferometric polarization-enhanced imaging differentiates carcinoma in situ from inflammation of the bladder: an ex vivo study	16
Automatic correction of motion artifact in dynamic contrast-enhanced fluorescence imaging during open orthopedic surgery	16
Influence of edge enhancement applied in endoscopic systems on sharpness and noise (Erratum)	16
Signal to noise ratio quantifies the contribution of spectral channels to classification of human head and neck tissues ex vivo using deep learning and multispectral imaging	16
Heavy water coupling gel for short-wave infrared photoacoustic imaging	15
Multi-reference global registration of individual A-lines in adaptive optics optical coherence tomography retinal images (Publisher’s Note)	15
Assessment of nonalcoholic fatty liver function by photoacoustic imaging	15
Single acquisition label-free histology-like imaging with dual-contrast photoacoustic remote sensing microscopy (Errata)	15
Realization of NIR-II 3D whole-body contour and tumor blood vessels imaging in small animals using rotational stereo vision technique	15
Empirical method for rapid quantification of intrinsic fluorescence signals of key metabolic probes from optical spectra measured on tissue-mimicking turbid medium	15
Special Section Guest Editorial: Polarimetry in Biomedical Optics	14
Effects of shell-integrated Sudan Black dye on the acoustic activity and ultrasound imaging properties of lipid-shelled nanoscale ultrasound contrast agents	14
Rapid, high-contrast, and steady volumetric imaging with Bessel-beam-based two-photon fluorescence microscopy	14
Comprehensive framework of GPU-accelerated image reconstruction for photoacoustic computed tomography	14
Quantitative photothermal analysis and multispectral imaging of dental structures: insights into optical and thermal properties of carious and healthy teeth	14
Single-distance and dual-slope frequency-domain near-infrared spectroscopy to assess skeletal muscle hemodynamics	13
Human embryonic stem cell classification: random network with autoencoded feature extractor	13
Combined flat-field and frequency filter approach to correcting artifacts of multichannel two-photon microscopy	13
Robust, high-density lesion mapping in the left atrium with near-infrared spectroscopy	13
Intraoperative characterization of cardiac tissue: the potential of light scattering spectroscopy	13
Remote and low-cost intraocular pressure monitoring by deep learning of speckle patterns	13
Identification of different types of tumors based on photoacoustic spectral analysis: preclinical feasibility studies on skin tumors	12
Potential of subdermal solar energy harvesting for medical device applications based on worldwide meteorological data	12
Perspectives on interstitial photodynamic therapy for malignant tumors	12
Evaluation of visible diffuse reflectance spectroscopy in liver tissue: validation of tissue saturations using extracorporeal circulation	12
Modeling toolchain for realistic simulation of photoacoustic data acquisition	12
Imaging sub-diffuse optical properties of cancerous and normal skin tissue using machine learning-aided spatial frequency domain imaging	11
Visualization and quantification of pancreatic tumor stroma in fresh tissue via ultraviolet surface excitation	11
Optical coherence tomography holds promise to transform the diagnostic anatomic pathology gross evaluation process	11
Optical clearing with tartrazine enables deep transscleral imaging with optical coherence tomography	11
Exploring the evolution of circular polarized light backscattered from turbid tissue-like disperse medium utilizing generalized Monte Carlo modeling approach with a combined use of Jones and Stokes–Mu	11
Estimation of diffuse Cherenkov optical emission from external beam radiation build-up in tissue	11
In vivo retinal melanin detection with the calibrated depolarization index in polarization-sensitive optical coherence tomography	11
Wide dynamic range measurement of blood flow in vivo using laser speckle contrast imaging	11
Measurement of absorption and reduced scattering coefficients in Asian human epidermis, dermis, and subcutaneous fat tissues in the 400- to 1100-nm wavelength range for optical penetration depth and e	11
Single acquisition label-free histology-like imaging with dual-contrast photoacoustic remote sensing microscopy	11
Optical clearing with tartrazine enables deep transscleral imaging with optical coherence tomography	11
Dependency of crossover point on absorption changes in bilayer diffusion reflection measurements	10
Combined frequency domain near-infrared spectroscopy and diffuse correlation spectroscopy system for comprehensive metabolic monitoring of inspiratory muscles during loading	10
In vivo two-photon-excited cellular fluorescence of melanin, NAD(P)H, and keratin enables an accurate differential diagnosis of seborrheic keratosis and pigmented cutaneous melanoma	10

Review of in vivo optical molecular imaging and sensing from x-ray excitation	10
Monte Carlo simulation of the effect of melanin concentration on light–tissue interactions for transmittance pulse oximetry measurement	10
Characterization of fluorescence lifetime of organic fluorophores for molecular imaging in the shortwave infrared window	10
Polydimethylsiloxane tissue-mimicking phantoms with tunable optical properties	10
Dynamic SWIR imaging near the 1950-nm water absorption band for caries lesion diagnosis	10
Generative adversarial network based digital stain conversion for generating RGB EVG stained image from hyperspectral H&E stained image	10
Objective color calibration for manufacturing facial prostheses	10
Review of optical reporters of radiation effects in vivo: tools to quantify improvements in radiation delivery technique	10
Robustness of tissue oxygenation estimates by continuous wave space-resolved near infrared spectroscopy	9
Hyperspectral imaging in neurosurgery: a review of systems, computational methods, and clinical applications	9
Monte Carlo simulation of spatial frequency domain imaging for breast tumors during compression	9
Cascaded domain multiphoton spatial frequency modulation imaging	9
Optical absorption spectra and corresponding in vivo photoacoustic visualization of exposed peripheral nerves	9
Patient-specific arterial input function for accurate perfusion assessment in intraoperative fluorescence imaging	9
In vivo skin optical clearing efficacy quantification of clinically compatible agents using line-field confocal optical coherence tomography	9
Dual optical elastography detects TGF-β-induced alterations in the biomechanical properties of skin scaffolds	9
Dermoscopy and skin imaging light sources: a comparison and review of spectral power distribution and color consistency	9
Image-guided Raman spectroscopy probe-tracking for tumor margin delineation	9
Depth detection limit of a fluorescent object in tissue-like medium with background emission in continuous-wave measurements: a phantom study	9
Dual division of focal plane polarimeters-based collinear reflection Mueller matrix fast imaging microscope	9
Compressed intracellular motility via non-uniform temporal sampling in dynamic optical coherence tomography	8
Deep-learning-based cross-modality translation from Stokes image to bright-field contrast	8
Methods and applications of full-filed optical coherence tomography: a review	8
Phase contrast reflectance confocal brain imaging at 1650 nm	8
Multiscale photoacoustic tomography of neural activities with GCaMP calcium indicators	8
Dual-modality rigid endoscope for photoacoustic imaging and white light videoscopy	8
Hyperspectral imaging of 4T1 mammary carcinomas grown in dorsal skinfold window chambers: spectral renormalization and fluorescence modeling	8
Accuracy enhancement of metabolic index-based blood glucose estimation with a screening process for low-quality data	8
Multi-laboratory performance assessment of diffuse optics instruments: the BitMap exercise	8
Patient-derived cancer organoid tracking with wide-field one-photon redox imaging to assess treatment response	8
Large-field-of-view optical-resolution optoacoustic microscopy using a stationary silicon-photonics acoustic detector	8
Quantitative phase imaging techniques for measuring scattering properties of cells and tissues: a review—part I	8
Incorporating early and late-arriving photons to improve the reconstruction of cerebral hemodynamic responses acquired by time-resolved near-infrared spectroscopy	8
Sounding out the dynamics: a concise review of high-speed photoacoustic microscopy	8
Spatial analysis of polarimetric images to enhance near-surface sampling sensitivity: feasibility in demineralized teeth and other tissue-like media	8
Speculum-free portable preterm imaging system	8
Multimodal fluorescence lifetime imaging and optical coherence tomography for longitudinal monitoring of tissue-engineered cartilage maturation in a preclinical implantation model	8
Convolutional neural network advances in demosaicing for fluorescent cancer imaging with color–near-infrared sensors	8
Interpretable deep learning approach for oral cancer classification using guided attention inference network	8
Hyperspectral imaging for tumor segmentation on pigmented skin lesions	8
Saliva-based detection of COVID-19 infection in a real-world setting using reagent-free Raman spectroscopy and machine learning	8
Ultra-miniature dual-wavelength spatial frequency domain imaging for micro-endoscopy	8
Full-aperture extended-depth oblique plane microscopy through dynamic remote focusing	8
Multispectral imaging of nailfold capillaries using light-emitting diode illumination	8
Impact of signal-to-noise ratio and contrast definition on the sensitivity assessment and benchmarking of fluorescence molecular imaging systems	8
Deep learning-based optical approach for skin analysis of melanin and hemoglobin distribution	8
Framework for denoising Monte Carlo photon transport simulations using deep learning	8
Targeted multispectral filter array design for the optimization of endoscopic cancer detection in the gastrointestinal tract	8
Functional imaging with dynamic quantitative oblique back-illumination microscopy	8
Visualizing veins from color images under varying illuminations for medical applications	8
Approaching closed spherical, full-view detection for photoacoustic tomography	8
Skin chromophore mapping by smartphone RGB camera under spectral band and spectral line illumination	8
Artificial neural networks trained on simulated multispectral data for real-time imaging of skin microcirculatory blood oxygen saturation	8
Bimodal multispectral imaging system with cloud-based machine learning algorithm for real-time screening and detection of oral potentially malignant lesions and biopsy guidance	8
Meshless Monte Carlo radiation transfer method for curved geometries using signed distance functions	7
Compact and ultracompact spectral imagers: technology and applications in biomedical imaging	7
Two-photon scanned light sheet fluorescence microscopy with axicon imaging for fast volumetric imaging	7
Special Section Guest Editorial: Wearable, Implantable, Mobile, and Remote Biomedical Optics and Photonics	7
Low-cost optofluidic add-on enables rapid selective plane illumination microscopy of C. elegans with a conventional wide-field microscope	7
Extracellular pH affects the fluorescence lifetimes of metabolic co-factors	7
Ninety years of pulse oximetry: history, current status, and outlook	7
Impact of illumination spectrum and eye pigmentation on image quality from a fundus camera using transscleral illumination	7
Assessing spectral effectiveness in color fundus photography for deep learning classification of retinopathy of prematurity	7
Elastic property of sickle cell anemia and sickle cell trait red blood cells	7
Special Section Guest Editorial: Introduction to the Special Section Celebrating 30 years of Open Source Monte Carlo Codes in Biomedical Optics	7
Unsupervised super-resolution reconstruction of hyperspectral histology images for whole-slide imaging (Errata)	7
Detection of breast cancer using machine learning on time-series diffuse optical transillumination data	7
Method for measurement of collagen monomer orientation in fluorescence microscopy	7
Inhibition of B-cell lymphoma 2 family proteins alters optical redox ratio, mitochondrial polarization, and cell energetics independent of cell state	7
Fluorescence-guided surgical system using holographic display: from phantom studies to canine patients	7
Tunable blood oxygenation in the vascular anatomy of a semi-anthropomorphic photoacoustic breast phantom	7
Terahertz spectroscopy analysis of human corneal sublayers	7
Label-free differentiation of human pancreatic cancer, pancreatitis, and normal pancreatic tissue by molecular spectroscopy	7
In vivo dual-mode full-field optical coherence tomography for differentiation of types of melanocytic nevi	7
Experimental imaging and Monte Carlo modeling of ultrafast pulse propagation in thin scattering slabs	7
Depolarization diagrams for circularly polarized light scattering for biological particle monitoring	7
Label-free quantitative measurement of cardiovascular dynamics in a zebrafish embryo using frequency-comb-referenced-quantitative phase imaging	7
OCT particle tracking velocimetry of biofluids in a microparallel plate strain induction chamber	7
Dither removing Fourier ptychographic microscope based on a two-axis rotation stage	7
Influence of optical aberrations on depth-specific spatial frequency domain techniques	7

Irradiance uniformity optimization for a photodynamic therapy treatment device with 3D scanner	7
Quantitative molecular bioluminescence tomography	7
Photonics probing of pup brain tissue and molecular-specific nuclear nanostructure alterations due to fetal alcoholism via light scattering/localization approaches	7
Integration of cellular-resolution optical coherence tomography and Raman spectroscopy for discrimination of skin cancer cells with machine learning	7
Shortwave infrared diffuse optical wearable probe for quantification of water and lipid content in emulsion phantoms using deep learning	6
Binary photoacoustic tomography for improved vasculature imaging	6
Development and characterization of phasor-based analysis for FLIM to evaluate the metabolic and epigenetic impact of HER2 inhibition on squamous cell carcinoma cultures	6
Skin characterization of diabetes mellitus revealed by polarization-sensitive optical coherence tomography imaging	6
Improved sensitivity roll-off in dual reference, buffered spectral-domain optical coherence tomography	6
Multiplexed optical fiber cell temperature sensing system with high sensitivity and accuracy	6
Three-dimensional vascular and metabolic imaging using inverted autofluorescence	6
Improved in vivo optical coherence tomography imaging of animal peripheral nerves using a prism nerve holder	6
Quantifying tissue properties and absolute hemodynamics using coherent spatial imaging	6
Noninvasive optical monitoring of pulmonary embolism: a Monte Carlo study on visible Chinese human thoracic tissues	6
Observation and density estimation of a large number of skin capillaries using wide-field portable video capillaroscopy and semantic segmentation	6
High-sensitivity dynamic diffuse fluorescence tomography system for fluorescence pharmacokinetics	6
Stain-free enucleation of mouse and human oocytes with a 1033 nm femtosecond laser	6
Multimodality system of x-ray and fluorescence based on Fourier single-pixel imaging for small animals	6
Tissue harvest with a laser microbiopsy (Erratum)	6
Spatial frequency domain Mueller matrix imaging	6
Optofluidic flow meter for sub-nanoliter per minute flow measurements	6
Customizable optical tissue phantom platform for characterization of fluorescence imaging device sensitivity	6
Spectral correction of light emitting diodes enables accurate hydration ratio calculation using narrowband diffuse reflectance spectroscopy	6
Special Section Guest Editorial: Short Wave Infrared Techniques and Applications in Biomedical Optics	6
Video-rate endocavity photoacoustic/harmonic ultrasound imaging with miniaturized light delivery	6
Multimodal 3D photoacoustic remote sensing and confocal fluorescence microscopy imaging	6
Expanding the applicability of multiphoton fluorescence recovery after photobleaching by incorporating shear stress in laminar flow	6
Solid optical tissue phantom tools based on upconverting nanoparticles for biomedical applications	6
Three-dimensional tracking using a single-spot rotating point spread function created by a multiring spiral phase plate	6
Smartphone-based dual radiometric fluorescence and white-light imager for quantification of protoporphyrin IX in skin	6
Broadband diffuse optical spectroscopy of absolute methemoglobin concentration can distinguish benign and malignant breast lesions	5
In vivo microscopy as an adjunctive tool to guide detection, diagnosis, and treatment	5
Photoacoustic imaging plus X: a review	5
Imperfect refractive index matching in scanning laser optical tomography and a method for digital correction	5
Modular head-mounted cortical imaging device for chronic monitoring of intrinsic signals in mice	5
Review of machine learning for optical imaging of burn wound severity assessment	5
In situ terahertz monitoring of an ice ball formation during tissue cryosurgery: a feasibility test	5
Using Fourier ptychography microscopy to achieve high-resolution chromosome imaging: an initial evaluation	5
Multiple illumination learned spectral decoloring for quantitative optoacoustic oximetry imaging	5
Label-free multimodal nonlinear optical imaging of needle biopsy cores for intraoperative cancer diagnosis	5
Terahertz scanning of the rabbit cornea with experimental UVB-induced damage: in vivo assessment of hydration and its verification	5
Compact and cost-effective laser-powered speckle contrast optical spectroscopy fiber-free device for measuring cerebral blood flow	5
Targeted spectroscopy in the eye fundus	5
Exploring the bias: how skin color influences oxygen saturation readings via Monte Carlo simulations	5
Impact of corpus callosum fiber tract crossing on polarimetric images of human brain histological sections: ex vivo studies in transmission configuration	5
Mirau-based line-field confocal optical coherence tomography for three-dimensional high-resolution skin imaging	5
Stochastic three-dimensional numerical phantoms to enable computational studies in quantitative optoacoustic computed tomography of breast cancer	5
Performance enhancement in wavefront shaping of multiply scattered light: a review	5
Prediction of motion artifacts caused by translation in handheld laser speckle contrast imaging	5
Photoacoustic imaging for cutaneous melanoma assessment: a comprehensive review	5
Fast 3D super-resolution imaging using a digital micromirror device and binary holography	5
Two-step verification method for Monte Carlo codes in biomedical optics applications	5
Improved U-net-based leukocyte segmentation method	5
Real-time tracking of a diffuse reflectance spectroscopy probe used to aid histological validation of margin assessment in upper gastrointestinal cancer resection surgery	5
Focused x-ray luminescence imaging system for small animals based on a rotary gantry	5
Deep learning-based method to accurately estimate breast tissue optical properties in the presence of the chest wall	5
Kernel Flow: a high channel count scalable time-domain functional near-infrared spectroscopy system	5
Dual-wavelength photoacoustic atlas method to estimate fractional methylene blue and hemoglobin contents	5
Machine learning to extract physiological parameters from multispectral diffuse reflectance spectroscopy	5
Adaptive correction method of hybrid aberrations in Fourier ptychographic microscopy	5
Intraoperative molecular imaging clinical trials: a review of 2020 conference proceedings	5
Barium sulfate and pigment admixture for photoacoustic and x-ray contrast imaging of the gut	5
Physically informed Monte Carlo simulation of dual-wedge prism-based spectroscopic single-molecule localization microscopy	5
Model for the diffuse reflectance in spatial frequency domain imaging	5
Model for the diffuse reflectance in spatial frequency domain imaging (Erratum)	5
Convolutional neural network-based regression analysis to predict subnuclear chromatin organization from two-dimensional optical scattering signals	5
Diffuse optical spectroscopic method for tissue and body composition assessment	5