Journal of Biomedical Optics

Article	Citations
Intraoperative characterization of cardiac tissue: the potential of light scattering spectroscopy	54
Comparative analysis of intraoperative thermal and optical imaging for identification of the human primary sensory cortex	53
Er:YAG laser biofilm removal from zero-gap periodontal/peri-implant model system mimicking clinical attachment loss	48
Structured light imaging mesoscopy: detection of embedded morphological changes in superficial tissues	48
Blood component analysis using mid-infrared photoacoustic spectroscopy based on ultrasound detection: glucose analysis trial	41
Generalized 3D registration algorithm for enhancing retinal optical coherence tomography images	40
Assessment of nonalcoholic fatty liver function by photoacoustic imaging	37
Effects of phantom microstructure on their optical properties	36
Remote and low-cost intraocular pressure monitoring by deep learning of speckle patterns	35
Automatic correction of motion artifact in dynamic contrast-enhanced fluorescence imaging during open orthopedic surgery	32
ALA-based photodynamic priming in murine skin increases blood flow and oxygenation	30
Dual division of focal plane polarimeters-based collinear reflection Mueller matrix fast imaging microscope	29
Wide dynamic range measurement of blood flow in vivo using laser speckle contrast imaging	28
In vivo hamster cheek pouch subepithelial ablation, biomaterial injection, and localization: pilot study	27
Monte Carlo simulation of the effect of melanin concentration on light–tissue interactions for transmittance pulse oximetry measurement	26
Approaching closed spherical, full-view detection for photoacoustic tomography	26
Meshless Monte Carlo radiation transfer method for curved geometries using signed distance functions	24
Stain-free enucleation of mouse and human oocytes with a 1033 nm femtosecond laser	24
Polarization-insensitive optical coherence tomography using pseudo-depolarized reference light for mitigating birefringence-related image artifacts	24
Improved spatial speckle contrast model for tissue blood flow imaging: effects of spatial correlation among neighboring camera pixels	24
Hyperspectral imaging of 4T1 mammary carcinomas grown in dorsal skinfold window chambers: spectral renormalization and fluorescence modeling	23
Difference imaging from single measurements in diffuse optical tomography: a deep learning approach	22
Spectral correction of light emitting diodes enables accurate hydration ratio calculation using narrowband diffuse reflectance spectroscopy	22
High-sensitivity dynamic diffuse fluorescence tomography system for fluorescence pharmacokinetics	22
Depolarization diagrams for circularly polarized light scattering for biological particle monitoring	22

All-reflective tethered capsule endoscope for multimodal optical coherence tomography in the esophagus	21
Tissue harvest with a laser microbiopsy (Erratum)	21
Enhanced resolution optoacoustic microscopy using a picosecond high repetition rate Q-switched microchip laser	21
Solid optical tissue phantom tools based on upconverting nanoparticles for biomedical applications	21
Multiplexed optical fiber cell temperature sensing system with high sensitivity and accuracy	21
Two-step verification method for Monte Carlo codes in biomedical optics applications	20
Influence of optical aberrations on depth-specific spatial frequency domain techniques	20
Real-time tracking of a diffuse reflectance spectroscopy probe used to aid histological validation of margin assessment in upper gastrointestinal cancer resection surgery	20
Automatic detection of head and neck squamous cell carcinoma on histologic slides using hyperspectral microscopic imaging	20
Multimodal microscope for optical coherence microscopy, tomography, vibrometry, and two-photon microscopy in the living mouse cochlea	20
Special Section Guest Editorial: Introduction to the Special Section Celebrating 30 years of Open Source Monte Carlo Codes in Biomedical Optics	20
Photoacoustic imaging plus X: a review	19
Assessing spectral effectiveness in color fundus photography for deep learning classification of retinopathy of prematurity	19
Impact of signal-to-noise ratio and contrast definition on the sensitivity assessment and benchmarking of fluorescence molecular imaging systems	19
Deep learning-based optical approach for skin analysis of melanin and hemoglobin distribution	19
Spatial analysis of polarimetric images to enhance near-surface sampling sensitivity: feasibility in demineralized teeth and other tissue-like media	19
Deep structural brain imaging via computational three-photon microscopy	18
Laser absorption spectroscopy measurements of different pulmonary oxygen gas concentrations in transmittance and remittance geometry: phantom study	18
Scattering angle resolved optical coherence tomography measures morphological changes in Bacillus subtilis colonies	18
Minimizing near-infrared autofluorescence in preclinical imaging with diet and wavelength selection	18
Noise-robust phase-space deconvolution for light-field microscopy	17
Direct three-dimensional segmentation of prostate glands with nnU-Net	17
Comparison of minimal detectable protoporphyrin IX concentrations with a loupe device and conventional 5-ALA fluorescence microscopy: an experimental study	17
Emerging uses of 5-aminolevulinic-acid-induced protoporphyrin IX in medicine: a review of multifaceted, ubiquitous, molecular diagnostic, therapeutic, and theranostic opportunities	16
Characterization of bacteria swarming effect under plasmonic optical fiber illumination	16
Automatic granular and spinous epidermal cell identification and analysis on in vivo reflectance confocal microscopy images using cell morphological features	16
Evaluating clinical near-infrared surgical camera systems with a view to optimizing operator and computational signal analysis	16
MCDataset: a public reference dataset of Monte Carlo simulated quantities for multilayered and voxelated tissues computed by massively parallel PyXOpto Python package	15
Automated three-dimensional image registration for longitudinal photoacoustic imaging	15
Hybrid CNN–transformer demosaicing for bioinspired single-chip color-near-infrared fluorescence imaging in oncologic surgery	15
Conversion of imager-specific response to tissue phantom fluorescence into system of units-traceable units	15
Retrieval of chromophore concentration changes in a digital human head model using analytical mean partial pathlengths of photons	15
CellSNAP: a fast, accurate algorithm for 3D cell segmentation in quantitative phase imaging	15
Noise insensitive volumetric fusion method for enhanced photoacoustic microscopy	15
Multi-exposure speckle imaging through an optical fiber bundle	15
Development of a shortwave infrared sinuscope for the detection of cerebrospinal fluid leaks	14
Optical coherence tomography–enabled classification of the human venoatrial junction	14
Characterizing factors influencing calibration and optical property determination in quantitative reflectance spectroscopy to improve standardization	14
Reflective optical imaging for scattering medium using chaotic laser	14
Photoacoustic imaging on its way toward clinical utility: a tutorial review focusing on practical application in medicine	14
Intravital photoacoustic brain stimulation with high-precision	14
LED-based multicolor extended resolution transmission fluorescence microscopy	13
Lightweight and precise cell classification based on holographic tomography-derived refractive index point cloud	13
Dual-modality fluorescence lifetime imaging-optical coherence tomography intravascular catheter system with freeform catheter optics	13
Effects of patient-specific treatment planning on eligibility for photodynamic therapy of deep tissue abscess cavities: retrospective Monte Carlo simulation study	13
Flexible catheter optical coherence tomography of the porcine middle ear via the Eustachian tube using a 3D-printed reflective objective	13
Clinical PDT dose dosimetry for pleural Photofrin-mediated photodynamic therapy	13
Perspective on the optics of medical imaging	13
Depth distributions of bacteria for the Pseudomonas aeruginosa-infected burn wounds treated by methylene blue-mediated photodynamic therapy in rats: effects of additives to photosensitizer	13
Toward fluorescence digital twins: multi-parameter experimental validation of fluorescence Monte Carlo simulations using solid phantoms	13

Evaluating backscattering polarized light imaging microstructural mapping capabilities through neural tissue and analogous phantom imaging	13
Development of breast-mimicking phantoms for use in optical coherence elastography	13
Deep learning-based spectroscopic single-molecule localization microscopy	13
Impact of sample handling protocols on soft tissue attenuation coefficient and morphology	13
Multiphoton microscopy for label-free multicolor imaging of peripheral nerve	12
Utilizing convolutional neural networks for discriminating cancer and stromal cells in three-dimensional cell culture images with nuclei counterstain	12
New Year, New JBO Editor-in-Chief	12
Design and validation of a high-speed hyperspectral laparoscopic imaging system	12
Assessment of open-field fluorescence guided surgery systems: implementing a standardized method for characterization and comparison	12
Label-free imaging flow cytometry for cell classification based directly on multiple off-axis holographic projections	12
Incremental residual polarization caused by aging in human skin	12
Light-sheet autofluorescence lifetime imaging with a single-photon avalanche diode array	12
Scaling down the dimensions of a Fabry–Perot polymer film acoustic sensor for photoacoustic endoscopy	12
Perspectives in Biophotonics: a special issue in honor of the International Graduate Summer School on Biophotonics	12
Consensus guidelines for cellular label-free optical metabolic imaging: ensuring accuracy and reproducibility in metabolic profiling	11
Wavefront shaping improves the transparency of the scattering media: a review (Publisher’s Note)	11
Non-invasive assessment of sublingual microcirculation using flow derived from green light PPG: evaluation and reference values	11
Detection of live breast cancer cells in bright-field microscopy images containing white blood cells by image analysis and deep learning	11
Influence mechanism of the temporal duration of laser irradiation on photoacoustic technique: a review	11
Depth-dependent fluence compensation without a priori knowledge of tissue composition for quantitative ultrasound-guided photoacoustic imaging	11
Enhanced neuroimaging with a calcium sensor in ex-vivo Drosophila melanogaster brains using closed-loop adaptive optics light-sheet fluorescence microscopy	11
Imaging the ex-vivo human cochlea using 1.3-μm and 1.7-μm optical coherence tomography	11
Terahertz Mie scattering in tissue: diffuse polarimetric imaging and Monte Carlo validation in highly attenuating media models	11
Motion-resistant three-wavelength spatial frequency domain imaging system with ambient light suppression using an 8-tap CMOS image sensor	11
Two-stage diffuse fluorescence tomography for monitoring of drug distribution in photodynamic therapy of tumors	11
Hyperspectral dark-field microscopy of human breast lumpectomy samples for tumor margin detection in breast-conserving surgery	11
Asynchronous optical coherence elastography and directional phase gradient analysis	11
Restoration of metabolic functional metrics from label-free, two-photon human tissue images using multiscale deep-learning-based denoising algorithms	11
Motion-artifact-free single shot two-beam optical coherence elastography system	11
Two-stage classification strategy for breast cancer diagnosis using ultrasound-guided diffuse optical tomography and deep learning	11
Monte Carlo simulation platform for laser Doppler flowmetry	11
Perspective on the use of fluorescence molecular imaging for peripheral and deep en face margin assessment	10
Quantitative evaluation of the site-dependent cell viability in three-dimensional hepatocyte spheroids based on dynamic optical coherence tomography	10
Hardware-software co-design of an open-source automatic multimodal whole slide histopathology imaging system	10
Noninvasive continuous blood pressure prediction using FlexNIRS and machine learning during carotid endarterectomy	10
Relationship between depth-wise refractive index and biomechanical properties of human articular cartilage	10
Comparison of diffuse correlation spectroscopy analytical models for measuring cerebral blood flow in adults	10
Noninvasive holographic sensor system for measuring stiffness of soft micro samples	10
Learnable real-time inference of molecular composition from diffuse spectroscopy of brain tissue	10
Field programmable gate array compression for large array multispeckle diffuse correlation spectroscopy	10
Exploring near-infrared autofluorescence properties in parathyroid tissue: an analysis of fresh and paraffin-embedded thyroidectomy specimens	10
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using a tilted fiber-optic probe in diffuse reflectance spectroscopy, part 1: a theoretical framework for	10
Honoring Lihong V. Wang, a pioneer in biomedical optics	10
Evaluating blue light impact on reconstructed human epidermis using laser speckle imaging	10
Transmission infrared micro-spectroscopic study of individual human hair	10
Off-axis digital lensless holographic microscopy based on spatially multiplexed interferometry	10
Mouthwash as a non-invasive method of indocyanine green delivery for near-infrared fluorescence dental imaging	10
Photoacoustic and fluorescence dual-modality imaging of cerebral biomarkers in Alzheimer’s disease rodent model	10
Photoplethysmographic imaging and analysis of pulsatile pressure wave in palmar artery at 10 wavelengths	10
Wavefront shaping improves the transparency of the scattering media: a review	9
Two-color fluorescence-guided surgery for head and neck cancer resections	9
Deep-learning approach to stratified reconstructions of tissue absorption and scattering in time-domain spatial frequency domain imaging	9
Mapping functional hemodynamic and metabolic responses to dementia: a broadband spectroscopy pilot study	9
Patient-specific arterial input function for accurate perfusion assessment in intraoperative fluorescence imaging	9
Hyperspectral imaging in neurosurgery: a review of systems, computational methods, and clinical applications	9
HyperTRCSS: A hyperspectral time-resolved compressive sensing spectrometer for depth-sensitive monitoring of cytochrome-c-oxidase and blood oxygenation	9
Age-related changes in diffuse optical tomography sensitivity profiles from childhood to adulthood	9
Structurally constrained and pathology-aware convolutional transformer generative adversarial network for virtual histology staining of human coronary optical coherence tomography images	9
Near-infrared light-induced transcranial photobiomodulation enhances the visual pathway’s function in healthy volunteers	9
Skin chromophore mapping by smartphone RGB camera under spectral band and spectral line illumination	9
NIRFASTerFF: an accessible, cross-platform Python package for fast photon modeling	9
Multiresolution nondestructive 3D pathology of whole lymph nodes for breast cancer staging	9
Toward the development of a polarimetric tool to diagnose the fibrotic human ventricular myocardium	9
Development and preclinical evaluation of an endonasal Raman spectroscopy probe for transsphenoidal pituitary adenoma surgery	9
DOT-AE-GAN: a hybrid autoencoder–GAN model for enhanced ultrasound-guided diffuse optical tomography reconstruction	9
Single-distance and dual-slope frequency-domain near-infrared spectroscopy to assess skeletal muscle hemodynamics	9
Remote sensing of alcohol consumption using machine learning speckle pattern analysis	9
Convolutional neural network-based regression analysis to predict subnuclear chromatin organization from two-dimensional optical scattering signals	8
Combined optical-electromechanical wearable sensors for cardiac health monitoring	8
Robust, high-density lesion mapping in the left atrium with near-infrared spectroscopy	8
Monte Carlo simulation of spatial frequency domain imaging for breast tumors during compression	8
Combined frequency domain near-infrared spectroscopy and diffuse correlation spectroscopy system for comprehensive metabolic monitoring of inspiratory muscles during loading	8
Real-time identification of life-threatening necrotizing soft-tissue infections using indocyanine green fluorescence imaging	8
Basis function model to extract the combined confocal and fall-off function from multiple optical coherence tomography A-scans	8
Förster resonance energy transfer efficiency measurements on vinculin tension sensors at focal adhesions using a simple and cost-effective setup	8
3D photogrammetry quantifies the size of basal cell carcinoma lesions with submillimeter accuracy: high correlation with lesion response to photodynamic therapy	8
Femtosecond laser-assisted selective holding with ultra-low power for direct manipulation of biological species	8
Multi-laboratory performance assessment of diffuse optics instruments: the BitMap exercise	8
Impact of image preprocessing on dermatological OCTA vessel segmentation: a DERMA-OCTA study	8
Fast and robust Fourier ptychographic microscopy with position misalignment correction	8

Model for the diffuse reflectance in spatial frequency domain imaging (Erratum)	8
Diffuse optical tomography system for acute traumatic brain injury in the intensive care unit: a prospective study on healthy volunteers	8
Depth detection limit of a fluorescent object in tissue-like medium with background emission in continuous-wave measurements: a phantom study	8
Deep learning segmentation of periarterial and perivenous capillary-free zones in optical coherence tomography angiography	8
Comprehensive framework of GPU-accelerated image reconstruction for photoacoustic computed tomography	8
AI-powered remote monitoring of brain responses to clear and incomprehensible speech via speckle pattern analysis	8
Optimizing optical coherence tomography to detect occult spermatozoa in rat testis after induced non-obstructive azoospermia	7
Quantitative phase imaging techniques for measuring scattering properties of cells and tissues: a review—part I	7
Targeted multispectral filter array design for the optimization of endoscopic cancer detection in the gastrointestinal tract	7
Detection of breast cancer using machine learning on time-series diffuse optical transillumination data	7
Systematic comparison of fluorescence imaging in the near-infrared and shortwave-infrared spectral range using clinical tumor samples containing cetuximab-IRDye800CW	7
Kernel Flow: a high channel count scalable time-domain functional near-infrared spectroscopy system	7
Detection properties of indium-111 and IRDye800CW for intraoperative molecular imaging use across tissue phantom models	7
Compact and ultracompact spectral imagers: technology and applications in biomedical imaging	7
Improved in vivo optical coherence tomography imaging of animal peripheral nerves using a prism nerve holder	7
Convolutional neural network advances in demosaicing for fluorescent cancer imaging with color–near-infrared sensors	7
Improved U-net-based leukocyte segmentation method	7
Cherenkov light emission in external beam radiation therapy of the larynx	7
Impact of corpus callosum fiber tract crossing on polarimetric images of human brain histological sections: ex vivo studies in transmission configuration	7
Efficient quality control of platelet-rich plasma preparation using computer vision and deep learning	7
Optical intensity changes under static load and their dependence on dental implant design around bone-mimicking material	7
Adaptive correction method of hybrid aberrations in Fourier ptychographic microscopy	7
Using Fourier ptychography microscopy to achieve high-resolution chromosome imaging: an initial evaluation	7
Elucidating the effect of tumor and background region-of-interest selection on the performance metrics used to assess fluorescence imaging	7
In vivo tumor imaging of pre-clinical models via reflection-mode measurements of circular degree of polarization	7
Deep-learning-based cross-modality translation from Stokes image to bright-field contrast	7
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using tilted fiber-optic probe diffuse reflectance spectroscopy, part 2: probe design, realization, and ex	7
Customizable optical tissue phantom platform for characterization of fluorescence imaging device sensitivity	7
Ninety years of pulse oximetry: history, current status, and outlook	7
Optofluidic flow meter for sub-nanoliter per minute flow measurements	7
Integration of cellular-resolution optical coherence tomography and Raman spectroscopy for discrimination of skin cancer cells with machine learning	7
Subsurface fluorescence time-of-flight imaging using a large-format single-photon avalanche diode sensor for tumor depth assessment	6
Reconstruction of fluorophore absorption and fluorescence lifetime using early photon mesoscopic fluorescence molecular tomography: a phantom study	6
X-ray Cherenkov-luminescence tomography reconstruction with a three-component deep learning algorithm: Swin transformer, convolutional neural network, and locality module	6
Compact and cost-effective laser-powered speckle contrast optical spectroscopy fiber-free device for measuring cerebral blood flow	6
Depth-dependent attenuation and backscattering characterization of optical coherence tomography by stationary iterative method	6
Special Section Guest Editorial: Tissue Phantoms to Advance Biomedical Optical Systems	6
Challenges and advances in two-dimensional photoacoustic computed tomography: a review	6
Multifocal acoustic radiation force-based reverberant optical coherence elastography for evaluation of ocular globe biomechanical properties	6
Spectral analysis of multiple scattering factors of turbid media for glucose measurement using near-infrared spectroscopy	6
Multiwavelength tissue-mimicking phantoms with tunable vessel pulsation	6
Looking deep inside tissue with photoacoustic molecular probes: a review	6
Fiftieth anniversary of fiber optic–based fluorometry of brain mitochondrial NADH redox state monitored in vivo	6
Self-calibrated pulse oximetry algorithm based on photon pathlength change and the application in human freedivers	6
Dedicated near-infrared oximeter to monitor oxygenation in the superior sagittal sinus in newborn infants: a research agenda	6
Fluid mechanics approach to analyzing collagen fiber organization	6
Can diffuse reflectance spectroscopy identify shuntodynia in pediatric hydrocephalus patients?	6
Acoustic resolution photoacoustic Doppler flowmetry for assessment of patient rectal cancer blood perfusion	6
Robust lumen segmentation based on temporal residual U-Net using spatiotemporal features in intravascular optical coherence tomography images	6
Increased fluorescence observation intensity during the photodynamic diagnosis of deeply located tumors by fluorescence photoswitching of protoporphyrin IX	6
Brillouin microscopy in cancer research: a review	6
Advancing infantile hemangioma diagnosis by integrating temperature, color, and texture	6
Polarized hyperspectral microscopic imaging system for enhancing the visualization of collagen fibers and head and neck squamous cell carcinoma	6
Large field-of-view short-wave infrared metalens for scanning fiber endoscopy	6
Margin assessment during breast conserving surgery using diffuse reflectance spectroscopy	6
Macroscopic inelastic scattering imaging using a hyperspectral line-scanning system identifies invasive breast cancer in lumpectomy and mastectomy specimens	6
Light-guided dynamic phantom to mimic microvasculature for biomedical applications: an exploration for pulse oximeter	6
Water and hemoglobin modulated gelatin-based phantoms to spectrally mimic inflamed tissue in the validation of biomedical techniques and the modeling of microdialysis data	6
Analysis of muscle tissue in vivo using fiber-optic autofluorescence and diffuse reflectance spectroscopy	6
Multivariate analysis of breast tissue using optical parameters extracted from a combined time-resolved fluorescence and diffuse reflectance system for tumor margin detection	6
Tetherless miniaturized point detector device for monitoring cortical surface hemodynamics in mice	6
Near-infrared imaging of head and neck squamous cell carcinoma using indocyanine green that targets the αvβ6 peptide	6
Affordable miniaturized speckle contrast diffuse correlation tomography device for depth-sensitive mapping of cerebral blood flow in rodents	6
ArthroNavi framework: stereo endoscope-guided instrument localization for arthroscopic minimally invasive surgeries	6
Image-guided Raman spectroscopy navigation system to improve transperineal prostate cancer detection. Part 2: in-vivo tumor-targeting using a classification model combining spectral and MRI-radiomics	6
Integrating optical coherence tomography and bioluminescence with predictive modeling for quantitative assessment of methicillin-resistant S. aureus biofilms	6
Improving diffuse optical tomography imaging quality using APU-Net: an attention-based physical U-Net model	6
JBO 2024 List of Reviewers	6
Transport-of-intensity phase imaging using commercially available confocal microscope	6
Machine learning–based classification of spatially resolved diffuse reflectance and autofluorescence spectra acquired on human skin for actinic keratoses and skin carcinoma diagnostics aid	6