Journal of Biomedical Optics

Papers
(The median citation count of Journal of Biomedical Optics is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Intraoperative characterization of cardiac tissue: the potential of light scattering spectroscopy125
Optimization of in vivo Cherenkov imaging dosimetry via spectral choices for ambient background lights and filtering90
In vivo hamster cheek pouch subepithelial ablation, biomaterial injection, and localization: pilot study73
Assessment of nonalcoholic fatty liver function by photoacoustic imaging54
Automatic correction of motion artifact in dynamic contrast-enhanced fluorescence imaging during open orthopedic surgery44
Single acquisition label-free histology-like imaging with dual-contrast photoacoustic remote sensing microscopy44
Effects of phantom microstructure on their optical properties40
Comparative analysis of intraoperative thermal and optical imaging for identification of the human primary sensory cortex39
Er:YAG laser biofilm removal from zero-gap periodontal/peri-implant model system mimicking clinical attachment loss36
Approaching closed spherical, full-view detection for photoacoustic tomography35
Wide dynamic range measurement of blood flow in vivo using laser speckle contrast imaging33
Remote and low-cost intraocular pressure monitoring by deep learning of speckle patterns32
Generalized 3D registration algorithm for enhancing retinal optical coherence tomography images32
Dual division of focal plane polarimeters-based collinear reflection Mueller matrix fast imaging microscope29
Looking for a perfect match: multimodal combinations of Raman spectroscopy for biomedical applications29
Evaluation of visible diffuse reflectance spectroscopy in liver tissue: validation of tissue saturations using extracorporeal circulation29
Bimodal multispectral imaging system with cloud-based machine learning algorithm for real-time screening and detection of oral potentially malignant lesions and biopsy guidance27
Monte Carlo simulation of the effect of melanin concentration on light–tissue interactions for transmittance pulse oximetry measurement26
Improved spatial speckle contrast model for tissue blood flow imaging: effects of spatial correlation among neighboring camera pixels23
Special Section Guest Editorial: Introduction to the Special Section Celebrating 30 years of Open Source Monte Carlo Codes in Biomedical Optics23
Meshless Monte Carlo radiation transfer method for curved geometries using signed distance functions23
Extracellular pH affects the fluorescence lifetimes of metabolic co-factors23
Two-step verification method for Monte Carlo codes in biomedical optics applications22
Spectral correction of light emitting diodes enables accurate hydration ratio calculation using narrowband diffuse reflectance spectroscopy21
Stain-free enucleation of mouse and human oocytes with a 1033 nm femtosecond laser21
Solid optical tissue phantom tools based on upconverting nanoparticles for biomedical applications21
Mobile-based oral cancer classification for point-of-care screening20
Impact of illumination spectrum and eye pigmentation on image quality from a fundus camera using transscleral illumination20
Automatic detection of head and neck squamous cell carcinoma on histologic slides using hyperspectral microscopic imaging20
Tissue harvest with a laser microbiopsy (Erratum)20
Deep learning-based optical approach for skin analysis of melanin and hemoglobin distribution20
Depolarization diagrams for circularly polarized light scattering for biological particle monitoring19
Multiplexed optical fiber cell temperature sensing system with high sensitivity and accuracy18
High-sensitivity dynamic diffuse fluorescence tomography system for fluorescence pharmacokinetics18
Polarization-insensitive optical coherence tomography using pseudo-depolarized reference light for mitigating birefringence-related image artifacts17
Enhanced resolution optoacoustic microscopy using a picosecond high repetition rate Q-switched microchip laser17
Real-time tracking of a diffuse reflectance spectroscopy probe used to aid histological validation of margin assessment in upper gastrointestinal cancer resection surgery17
Hyperspectral imaging of 4T1 mammary carcinomas grown in dorsal skinfold window chambers: spectral renormalization and fluorescence modeling17
All-reflective tethered capsule endoscope for multimodal optical coherence tomography in the esophagus17
Difference imaging from single measurements in diffuse optical tomography: a deep learning approach17
Impact of signal-to-noise ratio and contrast definition on the sensitivity assessment and benchmarking of fluorescence molecular imaging systems17
Minimizing near-infrared autofluorescence in preclinical imaging with diet and wavelength selection16
Influence of optical aberrations on depth-specific spatial frequency domain techniques16
Assessing spectral effectiveness in color fundus photography for deep learning classification of retinopathy of prematurity16
Spatial analysis of polarimetric images to enhance near-surface sampling sensitivity: feasibility in demineralized teeth and other tissue-like media16
Incorporating early and late-arriving photons to improve the reconstruction of cerebral hemodynamic responses acquired by time-resolved near-infrared spectroscopy16
Photoacoustic imaging plus X: a review16
Automated three-dimensional image registration for longitudinal photoacoustic imaging15
Characterization of bacteria swarming effect under plasmonic optical fiber illumination15
Retrieval of chromophore concentration changes in a digital human head model using analytical mean partial pathlengths of photons15
Comparison of minimal detectable protoporphyrin IX concentrations with a loupe device and conventional 5-ALA fluorescence microscopy: an experimental study15
Laser absorption spectroscopy measurements of different pulmonary oxygen gas concentrations in transmittance and remittance geometry: phantom study15
Quantitative dynamic near-infrared fluorescence imaging using indocyanine green for analysis of bowel perfusion after mesenteric resection15
Noise insensitive volumetric fusion method for enhanced photoacoustic microscopy15
Scattering angle resolved optical coherence tomography measures morphological changes in Bacillus subtilis colonies15
Deep structural brain imaging via computational three-photon microscopy14
Automatic granular and spinous epidermal cell identification and analysis on in vivo reflectance confocal microscopy images using cell morphological features14
MCDataset: a public reference dataset of Monte Carlo simulated quantities for multilayered and voxelated tissues computed by massively parallel PyXOpto Python package14
CellSNAP: a fast, accurate algorithm for 3D cell segmentation in quantitative phase imaging14
Evaluating clinical near-infrared surgical camera systems with a view to optimizing operator and computational signal analysis14
Multiphoton microscopy for label-free multicolor imaging of peripheral nerve13
Noise-robust phase-space deconvolution for light-field microscopy13
Photoacoustic imaging on its way toward clinical utility: a tutorial review focusing on practical application in medicine13
Imaging of enthesitis by an LED-based photoacoustic system (Erratum)13
Direct three-dimensional segmentation of prostate glands with nnU-Net13
Conversion of imager-specific response to tissue phantom fluorescence into system of units-traceable units13
Dual-modality fluorescence lifetime imaging-optical coherence tomography intravascular catheter system with freeform catheter optics12
Intravital photoacoustic brain stimulation with high-precision12
Label-free imaging flow cytometry for cell classification based directly on multiple off-axis holographic projections12
Depth distributions of bacteria for the Pseudomonas aeruginosa-infected burn wounds treated by methylene blue-mediated photodynamic therapy in rats: effects of additives to photosensitizer12
Design and validation of a high-speed hyperspectral laparoscopic imaging system12
Development of a shortwave infrared sinuscope for the detection of cerebrospinal fluid leaks12
Evaluating backscattering polarized light imaging microstructural mapping capabilities through neural tissue and analogous phantom imaging12
Special Series Guest Editorial: Artificial Intelligence and Machine Learning in Biomedical Optics12
Classification of imbalanced oral cancer image data from high-risk population12
Optical coherence tomography–enabled classification of the human venoatrial junction12
Characterizing factors influencing calibration and optical property determination in quantitative reflectance spectroscopy to improve standardization12
Reflective optical imaging for scattering medium using chaotic laser12
Effects of patient-specific treatment planning on eligibility for photodynamic therapy of deep tissue abscess cavities: retrospective Monte Carlo simulation study12
Deep learning-based spectroscopic single-molecule localization microscopy11
LED-based multicolor extended resolution transmission fluorescence microscopy11
Assessment of open-field fluorescence guided surgery systems: implementing a standardized method for characterization and comparison11
Light-sheet autofluorescence lifetime imaging with a single-photon avalanche diode array11
Spatial frequency domain imager based on a compact multiaperture camera: testing and feasibility for noninvasive burn severity assessment11
Perspective on the optics of medical imaging11
Clinical PDT dose dosimetry for pleural Photofrin-mediated photodynamic therapy11
Accurate and stable two-step LED position calibration method for Fourier ptychographic microscopy11
Two-stage diffuse fluorescence tomography for monitoring of drug distribution in photodynamic therapy of tumors10
Wavefront shaping improves the transparency of the scattering media: a review (Publisher’s Note)10
Hyperspectral dark-field microscopy of human breast lumpectomy samples for tumor margin detection in breast-conserving surgery10
Influence mechanism of the temporal duration of laser irradiation on photoacoustic technique: a review10
New Year, New JBO Editor-in-Chief10
Non-invasive assessment of sublingual microcirculation using flow derived from green light PPG: evaluation and reference values10
Enhanced neuroimaging with a calcium sensor in ex-vivo Drosophila melanogaster brains using closed-loop adaptive optics light-sheet fluorescence microscopy10
Restoration of metabolic functional metrics from label-free, two-photon human tissue images using multiscale deep-learning-based denoising algorithms10
Motion-artifact-free single shot two-beam optical coherence elastography system10
Perspectives in Biophotonics: a special issue in honor of the International Graduate Summer School on Biophotonics9
Incremental residual polarization caused by aging in human skin9
Detection of live breast cancer cells in bright-field microscopy images containing white blood cells by image analysis and deep learning9
Imaging the ex-vivo human cochlea using 1.3-μm and 1.7-μm optical coherence tomography9
Reflection-mode acousto-optic imaging using plane wave ultrasound pulses9
Evaluation of standardized performance test methods for biomedical Raman spectroscopy9
Comparison of diffuse correlation spectroscopy analytical models for measuring cerebral blood flow in adults9
Imaging in thick samples, a phased Monte Carlo radiation transfer algorithm9
Utilizing convolutional neural networks for discriminating cancer and stromal cells in three-dimensional cell culture images with nuclei counterstain9
Scaling down the dimensions of a Fabry–Perot polymer film acoustic sensor for photoacoustic endoscopy9
Two-stage classification strategy for breast cancer diagnosis using ultrasound-guided diffuse optical tomography and deep learning9
Motion-resistant three-wavelength spatial frequency domain imaging system with ambient light suppression using an 8-tap CMOS image sensor9
Remote sensing of alcohol consumption using machine learning speckle pattern analysis8
Fiber-based photoacoustic remote sensing microscopy and spectral-domain optical coherence tomography with a dual-function 1050-nm interrogation source8
Beer–Lambert law for optical tissue diagnostics: current state of the art and the main limitations8
Exploring near-infrared autofluorescence properties in parathyroid tissue: an analysis of fresh and paraffin-embedded thyroidectomy specimens8
Honoring Lihong V. Wang, a pioneer in biomedical optics8
Structurally constrained and pathology-aware convolutional transformer generative adversarial network for virtual histology staining of human coronary optical coherence tomography images8
Noninvasive holographic sensor system for measuring stiffness of soft micro samples8
Learnable real-time inference of molecular composition from diffuse spectroscopy of brain tissue8
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using a tilted fiber-optic probe in diffuse reflectance spectroscopy, part 1: a theoretical framework for 8
Off-axis digital lensless holographic microscopy based on spatially multiplexed interferometry8
Development and preclinical evaluation of an endonasal Raman spectroscopy probe for transsphenoidal pituitary adenoma surgery8
Wavefront shaping improves the transparency of the scattering media: a review8
Photoplethysmographic imaging and analysis of pulsatile pressure wave in palmar artery at 10 wavelengths8
Photoacoustic and fluorescence dual-modality imaging of cerebral biomarkers in Alzheimer’s disease rodent model8
Transmission infrared micro-spectroscopic study of individual human hair8
Age-related changes in diffuse optical tomography sensitivity profiles from childhood to adulthood8
Two-color fluorescence-guided surgery for head and neck cancer resections8
Relationship between depth-wise refractive index and biomechanical properties of human articular cartilage8
Multiresolution nondestructive 3D pathology of whole lymph nodes for breast cancer staging8
Field programmable gate array compression for large array multispeckle diffuse correlation spectroscopy8
Deep-learning approach to stratified reconstructions of tissue absorption and scattering in time-domain spatial frequency domain imaging8
Polydimethylsiloxane tissue-mimicking phantoms with tunable optical properties8
HyperTRCSS: A hyperspectral time-resolved compressive sensing spectrometer for depth-sensitive monitoring of cytochrome-c-oxidase and blood oxygenation8
Hardware-software co-design of an open-source automatic multimodal whole slide histopathology imaging system8
Toward the development of a polarimetric tool to diagnose the fibrotic human ventricular myocardium8
Quantitative evaluation of the site-dependent cell viability in three-dimensional hepatocyte spheroids based on dynamic optical coherence tomography8
Mouthwash as a non-invasive method of indocyanine green delivery for near-infrared fluorescence dental imaging8
Depth detection limit of a fluorescent object in tissue-like medium with background emission in continuous-wave measurements: a phantom study8
Real-time identification of life-threatening necrotizing soft-tissue infections using indocyanine green fluorescence imaging7
Basis function model to extract the combined confocal and fall-off function from multiple optical coherence tomography A-scans7
Targeted multispectral filter array design for the optimization of endoscopic cancer detection in the gastrointestinal tract7
Detection of breast cancer using machine learning on time-series diffuse optical transillumination data7
Method for measurement of collagen monomer orientation in fluorescence microscopy7
Fast and robust Fourier ptychographic microscopy with position misalignment correction7
Single-distance and dual-slope frequency-domain near-infrared spectroscopy to assess skeletal muscle hemodynamics7
Perspectives on interstitial photodynamic therapy for malignant tumors7
Minimally invasive intrathecal spinal cord imaging with optical coherence tomography7
Patient-specific arterial input function for accurate perfusion assessment in intraoperative fluorescence imaging7
Improved U-net-based leukocyte segmentation method7
Quantitative phase imaging techniques for measuring scattering properties of cells and tissues: a review—part I7
Impact of corpus callosum fiber tract crossing on polarimetric images of human brain histological sections: ex vivo studies in transmission configuration7
Optofluidic flow meter for sub-nanoliter per minute flow measurements7
Customizable optical tissue phantom platform for characterization of fluorescence imaging device sensitivity7
Comprehensive framework of GPU-accelerated image reconstruction for photoacoustic computed tomography7
Combined frequency domain near-infrared spectroscopy and diffuse correlation spectroscopy system for comprehensive metabolic monitoring of inspiratory muscles during loading7
Femtosecond laser-assisted selective holding with ultra-low power for direct manipulation of biological species7
Hyperspectral imaging in neurosurgery: a review of systems, computational methods, and clinical applications7
Convolutional neural network-based regression analysis to predict subnuclear chromatin organization from two-dimensional optical scattering signals7
Systematic comparison of fluorescence imaging in the near-infrared and shortwave-infrared spectral range using clinical tumor samples containing cetuximab-IRDye800CW7
Model for the diffuse reflectance in spatial frequency domain imaging (Erratum)7
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using tilted fiber-optic probe diffuse reflectance spectroscopy, part 2: probe design, realization, and ex7
Label-free quantitative measurement of cardiovascular dynamics in a zebrafish embryo using frequency-comb-referenced-quantitative phase imaging7
Deep-learning-based cross-modality translation from Stokes image to bright-field contrast7
Multi-laboratory performance assessment of diffuse optics instruments: the BitMap exercise7
Robust, high-density lesion mapping in the left atrium with near-infrared spectroscopy7
Skin chromophore mapping by smartphone RGB camera under spectral band and spectral line illumination7
Förster resonance energy transfer efficiency measurements on vinculin tension sensors at focal adhesions using a simple and cost-effective setup7
Monte Carlo simulation of spatial frequency domain imaging for breast tumors during compression7
Kernel Flow: a high channel count scalable time-domain functional near-infrared spectroscopy system6
Convolutional neural network advances in demosaicing for fluorescent cancer imaging with color–near-infrared sensors6
Detection properties of indium-111 and IRDye800CW for intraoperative molecular imaging use across tissue phantom models6
Adaptive correction method of hybrid aberrations in Fourier ptychographic microscopy6
Water and hemoglobin modulated gelatin-based phantoms to spectrally mimic inflamed tissue in the validation of biomedical techniques and the modeling of microdialysis data6
Reconstruction of fluorophore absorption and fluorescence lifetime using early photon mesoscopic fluorescence molecular tomography: a phantom study6
X-ray Cherenkov-luminescence tomography reconstruction with a three-component deep learning algorithm: Swin transformer, convolutional neural network, and locality module6
Transport-of-intensity phase imaging using commercially available confocal microscope6
Compact and cost-effective laser-powered speckle contrast optical spectroscopy fiber-free device for measuring cerebral blood flow6
Integration of cellular-resolution optical coherence tomography and Raman spectroscopy for discrimination of skin cancer cells with machine learning6
Two-photon scanned light sheet fluorescence microscopy with axicon imaging for fast volumetric imaging6
Improved in vivo optical coherence tomography imaging of animal peripheral nerves using a prism nerve holder6
Fluid mechanics approach to analyzing collagen fiber organization6
Can diffuse reflectance spectroscopy identify shuntodynia in pediatric hydrocephalus patients?6
Subsurface fluorescence time-of-flight imaging using a large-format single-photon avalanche diode sensor for tumor depth assessment6
Acoustic resolution photoacoustic Doppler flowmetry for assessment of patient rectal cancer blood perfusion6
Self-calibrated pulse oximetry algorithm based on photon pathlength change and the application in human freedivers6
Using Fourier ptychography microscopy to achieve high-resolution chromosome imaging: an initial evaluation6
Ninety years of pulse oximetry: history, current status, and outlook6
Optimizing optical coherence tomography to detect occult spermatozoa in rat testis after induced non-obstructive azoospermia6
Elucidating the effect of tumor and background region-of-interest selection on the performance metrics used to assess fluorescence imaging6
Analysis of muscle tissue in vivo using fiber-optic autofluorescence and diffuse reflectance spectroscopy6
Multivariate analysis of breast tissue using optical parameters extracted from a combined time-resolved fluorescence and diffuse reflectance system for tumor margin detection6
Sub-millimeter endoscope demonstrates feasibility of in vivo reflectance imaging, fluorescence imaging, and cell collection in the fallopian tubes6
Macroscopic inelastic scattering imaging using a hyperspectral line-scanning system identifies invasive breast cancer in lumpectomy and mastectomy specimens6
Compact and ultracompact spectral imagers: technology and applications in biomedical imaging6
Image-guided Raman spectroscopy navigation system to improve transperineal prostate cancer detection. Part 2: in-vivo tumor-targeting using a classification model combining spectral and MRI-radiomics 5
Spectral analysis of multiple scattering factors of turbid media for glucose measurement using near-infrared spectroscopy5
Looking deep inside tissue with photoacoustic molecular probes: a review5
Time-of-flight and noise-correlation-inspired algorithms for full-field shear-wave elastography using digital holography5
Multiwavelength tissue-mimicking phantoms with tunable vessel pulsation5
Neighbor-based adaptive sparsity orthogonal least square for fluorescence molecular tomography5
Rapid inverse radiative transfer solver for multiparameter spectrophotometry without integrating sphere5
Imaging the rotational mobility of carbon dot-gold nanoparticle conjugates using frequency domain wide-field time-resolved fluorescence anisotropy5
Multifocal acoustic radiation force-based reverberant optical coherence elastography for evaluation of ocular globe biomechanical properties5
Machine learning–based classification of spatially resolved diffuse reflectance and autofluorescence spectra acquired on human skin for actinic keratoses and skin carcinoma diagnostics aid5
Increased fluorescence observation intensity during the photodynamic diagnosis of deeply located tumors by fluorescence photoswitching of protoporphyrin IX5
Challenges and advances in two-dimensional photoacoustic computed tomography: a review5
ArthroNavi framework: stereo endoscope-guided instrument localization for arthroscopic minimally invasive surgeries5
Assessment of internal refractive index profile of stochastically inhomogeneous nuclear models via analysis of two-dimensional optical scattering patterns5
Multichromatic near-infrared imaging to assess interstitial lymphatic and venous uptake in vivo5
Large field-of-view short-wave infrared metalens for scanning fiber endoscopy5
Light-guided dynamic phantom to mimic microvasculature for biomedical applications: an exploration for pulse oximeter5
Erythrocyte nano-ghosts with dual optical and magnetic resonance characteristics5
Photoacoustic imaging of the dynamics of a dye-labeled IgG4 monoclonal antibody in subcutaneous tissue reveals a transient decrease in murine blood oxygenation under anesthesia5
Measuring and imaging of transcutaneous bilirubin, hemoglobin, and melanin based on diffuse reflectance spectroscopy5
Polarized hyperspectral microscopic imaging system for enhancing the visualization of collagen fibers and head and neck squamous cell carcinoma5
Accuracy and precision of depth-resolved estimation of attenuation coefficients in optical coherence tomography5
Dedicated near-infrared oximeter to monitor oxygenation in the superior sagittal sinus in newborn infants: a research agenda5
Subcellular analysis of nuclear and cytoplasmic redox indices differentiates breast cancer cell subtypes better than nuclear-to-cytoplasmic area ratio5
Margin assessment during breast conserving surgery using diffuse reflectance spectroscopy5
JBO 2024 List of Reviewers5
Special Section Guest Editorial: Tissue Phantoms to Advance Biomedical Optical Systems5
Improving diffuse optical tomography imaging quality using APU-Net: an attention-based physical U-Net model5
Review of consensus test methods in medical imaging and current practices in photoacoustic image quality assessment5
Tetherless miniaturized point detector device for monitoring cortical surface hemodynamics in mice5
Depth-dependent attenuation and backscattering characterization of optical coherence tomography by stationary iterative method5
Enhancing intraoperative tumor delineation with multispectral short-wave infrared fluorescence imaging and machine learning5
Real-time visualization of renal microperfusion using laser speckle contrast imaging5
Bubble dynamics and speed of jets for needle-free injections produced by thermocavitation5
Dimensional reduction based on peak fitting of Raman micro spectroscopy data improves detection of prostate cancer in tissue specimens5
Fiftieth anniversary of fiber optic–based fluorometry of brain mitochondrial NADH redox state monitored in vivo5
Near-infrared imaging of head and neck squamous cell carcinoma using indocyanine green that targets the αvβ6 peptide5
Robustness of tissue oxygenation estimates by continuous wave space-resolved near infrared spectroscopy4
Quantitative photothermal analysis and multispectral imaging of dental structures: insights into optical and thermal properties of carious and healthy teeth4
Optical clearing with tartrazine enables deep transscleral imaging with optical coherence tomography4
Semisupervised representative learning for measuring epidermal thickness in human subjects in optical coherence tomography by leveraging datasets from rodent models4
Light-based therapy of infected wounds: a review of dose considerations for photodynamic microbial inactivation and photobiomodulation4
Nanosecond multipulse retinal damage thresholds of elongated irradiance profiles in explant measurements and simulations4
Automatic detection of oral cancer in smartphone-based images using deep learning for early diagnosis4
Generative adversarial network based digital stain conversion for generating RGB EVG stained image from hyperspectral H&E stained image4
Ultra-miniature dual-wavelength spatial frequency domain imaging for micro-endoscopy4
Heavy water coupling gel for short-wave infrared photoacoustic imaging4
Spatiotemporal image reconstruction to enable high-frame-rate dynamic photoacoustic tomography with rotating-gantry volumetric imagers4
Evaluating feasibility of functional near-infrared spectroscopy in dolphins4
Automatic quantitative analysis of structure parameters in the growth cycle of artificial skin using optical coherence tomography4
In vivo accurate detection of the liver tumor with pharmacokinetic parametric images from dynamic fluorescence molecular tomography4
In vivo two-photon-excited cellular fluorescence of melanin, NAD(P)H, and keratin enables an accurate differential diagnosis of seborrheic keratosis and pigmented cutaneous melanoma4
Accuracy enhancement of metabolic index-based blood glucose estimation with a screening process for low-quality data4
Optical absorption spectra and corresponding in vivo photoacoustic visualization of exposed peripheral nerves4
Review of imaging test phantoms4
Introducing the Special Issue on Label-Free Quantitative Phase Imaging Honoring Prof. Gabriel Popescu, a Pioneer in Biomedical Optics4
3D-printed tissue-simulating phantoms for near-infrared fluorescence imaging of rheumatoid diseases4
Development of Pluoronic nanoparticles of fluorocoxib A for endoscopic fluorescence imaging of colonic adenomas4
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