Anaerobe

Papers
(The median citation count of Anaerobe is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-02-01 to 2025-02-01.)
ArticleCitations
Bacteremia due to Clostridium innocuum: Analysis of four cases and literature review59
Comparative clinical outcomes evaluation of hospitalized patients infected with Clostridioides difficile ribotype 106 vs. other toxigenic strains38
Probiotic-related Clostridium butyricum bacteremia: a case report and literature review35
EUCAST invite comments on new methods for antimicrobial susceptibility testing of anaerobic bacteria32
Presence of Clostridioides difficile in cattle feces, carcasses, and slaughterhouses: Molecular characterization and antibacterial susceptibility of the recovered isolates29
Impact of COVID19 pandemic on the incidence of health-care associated Clostridioides difficile infection26
Editorial Board25
First case of necrotizing fasciitis and bacteremia caused by Bifidobacterium breve25
Acknowledgement to reviewers24
Development of multiplex PCR panel for detection of anaerobic bacteria in clinical samples24
An inexpensive anaerobic chamber for the genetic manipulation of strictly anaerobic bacteria24
Establishment of a French surveillance system of Clostridiodes difficile infection: Comparison of patient’s characteristics with other national and European data23
First case report of Anaerobiospirillum succiniciproducens bacteremia in an HIV-infected patient in Taiwan - Molecular identification from a positive blood culture bottle23
Clinical anaerobic infections in an Indian tertiary care hospital: A two-year retrospective study22
Community-onset Clostridioides difficile infection in south Serbia22
Editorial Board22
Characterization of the components of the thioredoxin system in Bacteroides fragilis and evaluation of its activity during oxidative stress21
Clostridioides difficile in food and food products of animal origin in Assam, India20
Community-associated Clostridioides difficile infection in a general hospital from Argentina20
Editorial Board19
Clinical usefulness of anaerobic blood culture in pediatric patients with bacteremia19
Risk factors for recurrent healthcare-facility associated Clostridioides difficile infection in a Swedish setting19
Low usefulness of reporting tonsillar PCR Ct-values in pharyngeal infections with Fusobacterium necrophorum18
Differences between bloodstream infections involving Gram-positive and Gram-negative anaerobes17
Impact of the introduction of nucleic acid amplification testing on Clostridioides difficile detection and ribotype distribution in Wales17
Clostridioides difficile infection in Africa: A narrative review16
Polymicrobial anaerobic sepsis due to Bacteroides fragilis, Eggerthella lenta, Ruminoccocus gnavus, and Bilophila wadsworthia in a patient with myeloproliferative neoplasm16
Prevalence, genetic characteristics, and antimicrobial resistance of Clostridioides difficile isolates from horses in Korea15
Linkage study of surveillance and hospital admission data to investigate Clostridium difficile infection in hospital patients in Perth, Western Australia15
Identification of oral anaerobic bacteria and the beta-lactamase resistance genes from Iranian patients with periodontitis15
Three cases of Sutterella wadsworthensis bacteremia secondary to abdominal infections14
Antimicrobial susceptibility profiles of invasive isolates of anaerobic bacteria from a large Canadian reference laboratory: 2012–201914
A case of Slackia exigua bacteremia associated with pyometra in a patient with poor dentition14
Detailed analysis of metabolism reveals growth-rate-promoting interactions between Anaerostipes caccae and Bacteroides spp.13
Dogs in Rio de Janeiro as reservoirs of Clostridioides difficile ribotypes causing CDI in humans13
Add-on interventions for the prevention of recurrent Clostridioides Difficile infection: A systematic review and network meta-analysis13
The first case of septic arthritis of the knee caused by Eggerthia catenaformis13
Molecular characterization of metronidazole resistant Bacteroides strains from Kuwait13
Genotypic and phenotypic diversity of carbapenem-resistant Bacteroides fragilis strains collected from different clinical origins12
First large-scale study of antimicrobial susceptibility data, and genetic resistance determinants, in Fusobacterium necrophorum highlighting the importance of continuing focused susceptibility trend s12
Anaerobic biodegradation of fluoxetine using a high-performance bacterial community12
Clostridioides difficile infection promotes gastrointestinal dysfunction in human and mice post-acute phase of the disease12
Laboratory diagnosis of Clostridioides (Clostridium) difficile infection in domestic animals: A short review12
Ruminococcus gnavus bacteremia: Literature review and a case report associated with acute flare of ulcerative colitis in an immunocompromised patient12
Prevalence and characterization of Clostridium perfringens isolated from different chicken farms in China12
Clinical and microbiological characteristics of anaerobic bacteremia during 1994–2019: A Danish population-based cohort study11
Molecular epidemiology of endemic Clostridioides difficile infection in Japan11
Clostridioides difficile spores stimulate inflammatory cytokine responses and induce cytotoxicity in macrophages11
Toxinotyping and molecular characterization of antimicrobial resistance in Clostridium perfringens isolated from different sources of livestock and poultry11
Rapid release of sepsis markers heparin-binding protein and calprotectin triggered by anaerobic cocci poses an underestimated threat11
Systemic neutrophil degranulation and emergency granulopoiesis in patients with Clostridioides difficile infection11
Culture techniques for ciliate protozoa from the rumen: Recent advances and persistent challenges10
Unravelling the eco-specificity and pathophysiological properties of Cutibacterium species in the light of recent taxonomic changes10
Comparison of clinical characteristics, risk factors, and outcomes of patients infected with Bacteroides fragilis group at a tertiary care hospital in central China between 2017 and March 202410
Oxalobacter formigenes: A new hope as a live biotherapeutic agent in the management of calcium oxalate renal stones10
Association between the gut and oral microbiome with obesity10
Identification of cfxA gene variants and susceptibility patterns in β-lactamase-producing Prevotella strains10
Comment on “Antimicrobial susceptibility of Bacteroides fragilis group organisms in Hong Kong, 2020–2021”10
Brain abscesses caused by anaerobic bacteria10
First report of foodborne botulism due to Clostridium botulinum type A(B) from vegetarian home-canned pate in Hanoi, Vietnam10
Non-oral Prevotella stepping into the spotlight10
Bacteroides and related species: The keystone taxa of the human gut microbiota10
Clostridioides difficile infection in patients with and without COVID-19 during the pandemic: A retrospective cohort study from a tertiary referral hospital9
A metagenomic assessment of microbial communities in anaerobic bioreactors and sediments: Taxonomic and functional relationships9
Prevalence of cpe-positive Clostridium perfringens in surface-attached soil of commercially available potatoes and its significance as a potential source of food poisoning9
The role of extracellular structures in Clostridioides difficile biofilm formation9
Evaluation of different antigenic preparations against necrotic enteritis in broiler birds using a novel Clostridium perfringens type G strain9
Hospitalized patients with diarrhea: Rate of Clostridioides difficile infection underdiagnosis and drivers of clinical suspicion9
Antimicrobial susceptibility testing of anaerobic bacteria: In routine and research9
The impact of Akkermansia muciniphila and its extracellular vesicles in the regulation of serotonergic gene expression in a small intestine of mice9
Upregulation of the cfiA carbapenemase gene in a Bacteroides fragilis strain by the novel integrative and conjugative element Tn75639
Editorial Board9
Approaching toxigenic Clostridia from a One Health perspective9
Gardnerella vaginalis in urinary tract infections, are men spared?9
Isoeugenol-functionalized nanogels inhibit peri-implantitis associated bacteria in vitro8
Fatal Clostridium septicum myonecrosis from gastric perforation: A case report8
Initial expression levels of nimA are decisive for protection against metronidazole in Bacteroides fragilis8
Improvement of chronic GVHD after oral treatment with Clostridium butyricum (Miya BM)8
Different breakpoints interpretation yielded distinct resistance rates to moxifloxacin of clinically significant anaerobic bacteria8
Type IV pili facilitated natural competence in Fusobacterium nucleatum8
Detection of co-infection of Gardnerella vaginalis and Atopobium vaginae using qualitative PCR: A better predictor of bacterial vaginosis8
Predominance of Clostridioides difficile PCR ribotype 181 in northern Greece, 2016–20198
Immunogenicity of a recombinant chimera composed of CROP domain segments from the hemorrhagic and lethal toxins of Paeniclostridium sordellii8
Brain abscess caused by Parvimonas micra: A rare case report and literature review8
First reported case of Lachnoanaerobaculum gingivalis bacteremia in an acute myeloid leukemia patient with oral mucositis during high dose chemotherapy8
Changes in treatment of community-onset Clostridioides difficile infection after release of updated guidelines, Atlanta, Georgia, 20188
Lactobacillus acidophilus regulates abnormal serotonin availability in experimental ulcerative colitis8
False amoxicillin/clavulanic acid susceptibility in Bacteroides fragilis using gradient strip tests8
Carbapenem resistance in Bacteroides fragilis: A review of molecular mechanisms8
Clostridioides (Clostridium) difficile in adults with diarrhoea in Vietnam7
Purification of RgpA from external outer membrane vesicles of Porphyromonas gingivalis7
Intra-spinal abscess due to Bacteroides fragilis and Klebsiella pneumoniae co-infection in a child with spinal dysraphism7
Impact of nicotine and cotinine on macrophage inflammatory plasticity via vesicular modifications in gastrointestinal bacteria7
Prevalence of Clostridioides difficile in dogs (Canis familiaris) with gastrointestinal disorders in Rio de Janeiro7
Generating a fucose permease deletion mutant in Bifidobacterium longum subspecies infantis ATCC 156977
An uncommon case of native joint septic arthritis by Parvimonas micra7
Fusobacterium ulcerans: from gut to commensal and bacterial translocation?7
Characterizing prophages in the genus Fusobacterium7
Anaerobiospirillum succiniciproducens prosthetic joint infection7
Editorial Board7
Does over a century of aerobic phage work provide a solid framework for the study of phages in the gut?7
Description of eight human infections caused by Bacteroides pyogenes in a tertiary hospital of northern Spain7
Editorial Board7
Urinary tract infections caused by anaerobic bacteria. Utility of anaerobic urine culture7
Editorial Board7
Unusual case of necrotizing pneumonia caused by Fusobacterium nucleatum complicating influenza a virus infection7
Molecular study on metronidazole resistance in Bacteroides fragilis group isolates from a South Indian tertiary care center7
Anti-toxin antibody is not associated with recurrent Clostridium difficile infection7
Editorial Board6
Fusobacterium necrophorum oral infections – A need for guidance6
Persistent bacteremia and psoas abscess caused by a lethal toxin-deficient Paeniclostridium sordellii6
Pauci-symptomatic foodborne botulism due to Clostridium botulinum type B with predominant ophthalmologic presentation possibly after consumption of honey6
Clostridioides (Clostridium) difficile in children with diarrhoea in Vietnam6
First description of Lachnoanaerobaculum orale as a possible cause of human bacteremia6
Bacteremia due to Prevotella oris of probable hepatic origin6
Identification of Clostridium innocuum hypothetical protein that is cross-reactive with C. difficile anti-toxin antibodies6
Production and purification of Clostridium perfringens type C beta-toxin and IgG and IgY antitoxins6
A significant decreased in the frequency of Clostridioides difficile infection at the Italian Hospital of Desio over the last decade6
Cutibacterium acnes biofilm forming clinical isolates modify the formation and structure of Staphylococcus aureus biofilms, increasing their susceptibility to antibiotics6
Clostridioides difficile PCR Tcdb Cycle Threshold predicts toxin EIA positivity but not severity of infection6
A review of epidemiological models of Clostridioides difficile transmission and control (2009–2021)6
What's a SNP between friends: The lineage of Clostridioides difficile R20291 can effect research outcomes6
Clostridium perfringens from fresh water fish of Kashmir Himalaya and their aquatic environment: Toxinotyping and phylogenetic analysis6
Oral teicoplanin administration suppresses recurrence of Clostridioides difficile infection: Proof of concept6
Brain abscess mimicking acute stroke syndrome caused by dual Filifactor alocis and Porphyromonas gingivalis infections: A case report6
Gas gangrene caused by spontaneous Clostridium septicum infection: A case study6
Nonmammalian models to study Clostridioides difficile infection; a systematic review6
Growth assessment of mixed cultures of probiotics and common pathogens5
Airborne spores’ dissemination of a swine associated Clostridioides difficile clone5
Clostridium perfringens epsilon-toxin requires acid sphingomyelinase for cellular entry5
Extraintestinal Clostridioides difficile infection: Septic arthritis 12 months after colitis5
Bacteroides fragilis vertebral osteomyelitis: A rare clinical entity5
Risk factors of first recurrence of Clostridioides difficile infection5
Pacemaker infection and endocarditis due to Parvimonas micra: A case report and systematic review5
Fusobacterium necrophorum septic arthritis of the hip: A case-report and literature review5
Inhibitory effect of Brazilian red propolis on planktonic and biofilm forms of Clostridioides difficile5
Why foodborne botulism cannot be caused by honey5
Editorial on the first webinar of the Anaerobic Forum of India5
Editorial Board5
Fructo-oligosaccharides promote butyrate production over citrus pectin during in vitro fermentation by colonic inoculum from pig5
Metabolism of azo food dyes by bacterial members of the human gut microbiome5
Impact of COVID-19 pandemic on prevalence of Clostridioides difficile infection in a UK tertiary centre5
Fulminant Clostridioides (Costridium) difficile infection caused by a rare strain of PCR-ribotype 153 in Japan: A case report5
Membrane vesicles of Lactobacillus gasseri ATCC 19992 disrupt biofilms of vaginal pathogens5
Editorial Board5
Identification of a Czc-like operon of the periodontal pathobiont Porphyromonas gingivalis involved in metal ion efflux5
Microscopy methods for Clostridioides difficile5
Prevalence, toxin-typing and antimicrobial susceptibility of Clostridium perfringens in sheep with different feeding modes from Gansu and Qinghai provinces, China5
Comparative susceptibility of Gemella morbillorum to 13 antimicrobial agents5
Clostridium perfringens antigens and challenges for development of vaccines against necrotic enteritis in poultry5
Association between Bacteroides fragilis and Fusobacterium nucleatum infection and colorectal cancer in Vietnamese patients5
Appropriate cleaning reduces potential risk of spore transmission from patients with Clostridioides difficile infection treated in outpatient infusion centers4
In vivo pharmacodynamics of lascufloxacin and levofloxacin against Streptococcus pneumoniae and Prevotella intermedia in a pneumonia mixed-infection mouse model4
The role of anaerobic bacteria in the development and prevention of colorectal cancer: A review study4
Changes in the solid-associated bacterial and fungal communities following ruminal in vitro fermentation of winery by-products: aspects of the bioactive compounds and feed safety4
Anaerobes in specific infectious and noninfectious diseases: new developments4
Should the risk of Fusobacterium necrophorum pharyngotonsillitis influence prescribing empiric antibiotics for sore throats in adolescents and young adults?4
Clinical characteristics of Actinotignum schaalii bacteremia in a Japanese tertiary hospital4
High rate of Clostridioides difficile colonization in patients admitted to intensive care: A prospective cohort study4
The comparison of changes in fecal and mucosal microbiome in metabolic endotoxemia induced by a high-fat diet4
Tribute to Dr. Hebe Mabel Bianchini4
OxyR inactivation reduces the growth rate and oxidative stress defense in Capnocytophaga ochracea4
Contamination of home-grown and retail vegetables with Clostridioides difficile4
Septic hip abscess due to Fusobacterium nucleatum and Actinomyces turicensis in an immunocompetent SARS-CoV-2 positive patient4
Anaerobes in the microbiome4
Urinary tract infections: Should we think about the anaerobic cocci?4
Vegetative forms of Clostridium chauvoei trigger apoptotic and inflammatory responses on macrophages4
Peritoneal dialysis catheter-associated polymicrobial infection including Actinomyces neuii: Case report and brief literature review4
First case of abdominal infection caused by bacteroides fluxus4
Incidence of healthcare-associated Clostridioides difficile infection in a quaternary referral university hospital in Brazil4
The outer membrane protein of Fusobacterium necrophorum, 43K OMP, stimulates inflammatory cytokine production through nuclear factor kappa B activation4
Oral infection with a periodontal pathogen alters oral and gut microbiomes4
Antimicrobial susceptibility patterns of anaerobic bacteria at an Irish University Hospital over a ten-year period (2010–2020)4
Bactericidal activity of a substituted thiazole against multidrug-resistant Eggerthia catenaformis isolated from patients with dental abscess4
Antimicrobial-resistant Bacteroides fragilis in Thailand and their inhibitory effect in vitro on the growth of Clostridioides difficile4
Mechanisms of intestinal epithelial cell damage by Clostridium perfringens3
Clostridioides difficile in Latin America: A comprehensive review of literature (1984–2021)3
Antibiotic susceptibility screening of primate-associated Clostridium ventriculi3
Editorial: Pathogenic clostridia3
The first case of Veillonella atypica bacteremia in a patient with renal pelvic tumor3
Chitin promotes equol production via -acetylglucosamine in human fecal cultures3
Porphyromonas: A neglected potential key genus in human microbiomes3
Septic shock caused by Slackia exigua in a patient with diabetes3
Comparative genomic analysis and proposal of Clostridium yunnanense sp. nov., Clostridium rhizosphaerae sp. nov., and Clostridium paridis sp. nov., three novel Clostridium sensu stricto endophytes wit3
Impact of smokeless tobacco-associated bacteriome in oral carcinogenesis3
Impact of MALDI-TOF MS identification on anaerobic species and genus diversity in routine diagnostics3
Antimicrobial susceptibility testing of anaerobic bacteria causing bacteremia: A 13-year (2010–2022) retrospective study in a tertiary hospital3
Clostridioides difficile infection (CDI) during the COVID-19 pandemic3
Multiple hepatic and brain abscesses caused by Parvimonas micra: A case report and literature review3
Clonal diversity of Clostridium perfringens human clinical isolates with various toxin gene profiles based on multilocus sequence typing and alpha-toxin (PLC) typing3
Diversity of genomic clusters and CfiA/cfiA alleles in Bacteroides fragilis isolates from human and animals3
Antimicrobial susceptibility pattern of oral gram negative anaerobes from Indian subjects3
Antimicrobial susceptibility testing of Eggerthella lenta blood culture isolates at a university hospital in Belgium from 2004 to 20183
Veillonella orientalis sp. nov., an anaerobic Gram-stain-negaitve coccus isolated from saliva of a Thai child3
Prevalence, molecular characterization, and antimicrobial resistance profile of Clostridium perfringens from India: A scoping review3
Description of Faecalibacterium wellingii sp. nov. and two Faecalibacterium taiwanense strains, aiding to the reclassification of Faecalibacterium species3
Bioaugmentation with methanogens cultured in a micro-aerobic microbial community for overloaded anaerobic digestion recovery3
Two cases of Clostridium ramosum bacteremia with intestinal perforation: The antimicrobial susceptibility of clinical strains3
IL-13 protects from Clostridioides difficile colitis3
Transmission of toxigenic Clostridiodes difficile between a pet dog with diarrhea and a 10-month-old infant3
Characterization of mobile genetic elements in multidrug-resistant Bacteroides fragilis isolates from different hospitals in the Netherlands3
Antimicrobial susceptibility testing of Bacteroides species by disk diffusion: The NordicAST Bacteroides study3
Septic arthritis caused by Desulfovibrio desulfuricans: A case report and review of the literature3
Identification of linear B cell epitopes on the leukotoxin protein of Fusobacterium necrophorum3
Antimicrobial resistance progression in the United Kingdom: A temporal comparison of Clostridioides difficile antimicrobial susceptibilities3
Evaluation of the expression and immunogenicity of four versions of recombinant Clostridium perfringens beta toxin designed by bioinformatics tools3
Ferviditalea candida gen. nov., sp. nov., a novel member of the family Paenibacillaceae isolated from a geothermal area3
Oxygen exposure decreases the yield of high-molecular-weight DNA from some anaerobic bacteria and bacterial communities during DNA extraction3
“Breast abscess in a male patient due to Finegoldia magna and Bifidobacterium scardovii: An unusual entity”3
Development and clinical validation of an automated cell cytotoxicity neutralization assay for detecting Clostridioides difficile toxins in clinically relevant stools samples3
Regulatory networks: Linking toxin production and sporulation in Clostridioides difficile3
Characterization of the oxidative stress response regulatory network in Bacteroides fragilis: An interaction between BmoR and OxyR regulons promotes abscess formation in a model of intra-abdominal inf3
Isolation, toxinotyping and antimicrobial susceptibility testing of Clostridium perfringens isolated from Pakistan poultry3
The role of Actinomyces spp. and related organisms in cervicofacial infections: Pathomechanism, diagnosis and therapeutic aspects3
Identification of enterotoxigenic Bacteroides fragilis in patients with diarrhea: A study targeting 16S rRNA, gyrB and nanH genes3
Evaluation of polymerase chain reaction-based open reading frame typing method for the clonality investigation of Clostridioides difficile isolates3
The impact of existing total anti-toxin B IgG immunity in outcomes of recurrent Clostridioides difficile infection3
The small acid-soluble proteins of spore-forming organisms: similarities and differences in function3
Antibiotic susceptibility and biofilm-forming ability of Veillonella strains3
Labelling of a live obligate anaerobe using fluorescent D-amino acids3
Sepsis caused by Anaerococcus nagyae after transarterial-chemoembolization for hepatocellular carcinoma: Case report and literature review2
Bifidobacterium bacteraemia is rare with routine probiotics use in preterm infants: A further case report with literature review2
High value-added chemical production through anaerobic codigestion of corn straw with a microbial consortium, cow manure and cow digestion solution2
Editorial Board2
Multi-year comparison of VITEK® MS and 16S rRNA gene sequencing performance for the identification of rarely encountered anaerobes causing invasive human infections in a large Canadian region: can our2
Antimicrobial effects of cannabidiol on select agriculturally important Clostridia2
Increase of healthcare-onset Clostridioides difficile infection in adult population since SARS-CoV-2 pandemic: A retrospective cohort study in a tertiary care hospital from 2019 to 20222
Common laboratory tests and their correlation with the clinical presentation and prognosis of Lemierre syndrome2
Etiology and antimicrobial susceptibility profiles of anaerobic bacteria isolated from clinical samples in a university hospital in Madrid, Spain2
Polyphasic molecular approach to the characterization of methanogens in the saliva of Tunisian adults2
Misidentification of Phocaeicola (Bacteroides) dorei in two patients with bacteremia2
Prosthetic joint infection caused by an atypical gram-negative bacilli: Odoribacter splanchnicus2
Eggerthia catenaformis-related peritonitis in a patient with peritoneal dialysis2
Evaluation of loop-mediated isothermal amplification assay for detection of Clostridioides difficile infection: A prospective diagnostic performance study2
A case of bacteremia caused by Slackia exigua in a patient with liver abscess, which caused by fish puncture through the stomach wall2
Human neutrophils are resistant to Clostridioides difficile toxin B2
Novel and rare β-lactamase genes of Bacteroides fragilis group species: Detection of the genes and characterization of their genetic backgrounds2
TMT-based quantitative proteomics reveals the nutritional and stress resistance functions of anaerobic fungi in yak rumen during passage at different time intervals2
Effect of formalin percentage, incubation time and temperature on Clostridium chauvoei culture inactivation and immunogenicity2
Non-steroidal anti-inflammatory drugs are not associated with increased risk of Clostridioides difficile infection: A propensity-score-matched case-control study2
Rumen bacterial diversity in relation to nitrogen retention in beef cattle2
Inhibitory effect of d-arabinose on oral bacteria biofilm formation on titanium discs2
Late onset prosthetic joint infection caused by Parvimonas micra2
Editorial Board2
Clostridium septicum endophthalmitis as the first manifestation of a colon adenocarcinoma: A case report2
The dilemma of identifying Peptoniphilus species by using two MALDI-TOF MS systems2
Immunogenicity of a pentavalent recombinant Escherichia coli bacterin against enterotoxemia and botulism in sheep2
Identification of root canal microbiota profiles of periapical tissue diseases using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry2
The role of microbiome-based therapeutics for the reduction and prevention of antimicrobial-resistant organism colonization2
A rare cause of bacteremia due to Porphyromonas asaccharolytica in a patient with necrotizing fasciitis2
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