Anaerobe

Papers
(The median citation count of Anaerobe is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Culture techniques for ciliate protozoa from the rumen: Recent advances and persistent challenges68
Presence of Clostridioides difficile in cattle feces, carcasses, and slaughterhouses: Molecular characterization and antibacterial susceptibility of the recovered isolates55
Molecular characterization of metronidazole resistant Bacteroides strains from Kuwait43
Polymorphonuclear neutrophil depletion in ileal tissues reduces the immunopathology induced by Clostridioides difficile toxins37
First case of necrotizing fasciitis and bacteremia caused by Bifidobacterium breve36
Editorial Board33
Fusobacterium necrophorum septic arthritis of the hip: A case-report and literature review29
Clostridium perfringens from fresh water fish of Kashmir Himalaya and their aquatic environment: Toxinotyping and phylogenetic analysis28
Carbapenem resistance in Bacteroides fragilis: A review of molecular mechanisms28
Approaching toxigenic Clostridia from a One Health perspective26
Clostridium perfringens antigens and challenges for development of vaccines against necrotic enteritis in poultry25
Fulminant Clostridioides (Costridium) difficile infection caused by a rare strain of PCR-ribotype 153 in Japan: A case report25
Clostridioides (Clostridium) difficile in children with diarrhoea in Vietnam24
Clinical characteristics of Actinotignum schaalii bacteremia in a Japanese tertiary hospital23
Membrane vesicles of Lactobacillus gasseri ATCC 19992 disrupt biofilms of vaginal pathogens22
“Breast abscess in a male patient due to Finegoldia magna and Bifidobacterium scardovii: An unusual entity”21
Evaluation of polymerase chain reaction-based open reading frame typing method for the clonality investigation of Clostridioides difficile isolates20
Urinary tract infections: Should we think about the anaerobic cocci?19
Anaerobes in specific infectious and noninfectious diseases: new developments18
Oral infection with a periodontal pathogen alters oral and gut microbiomes18
Development and clinical validation of an automated cell cytotoxicity neutralization assay for detecting Clostridioides difficile toxins in clinically relevant stools samples17
Contamination of home-grown and retail vegetables with Clostridioides difficile17
Antimicrobial susceptibility testing of Eggerthella lenta blood culture isolates at a university hospital in Belgium from 2004 to 201817
Prevalence, molecular characterization, and antimicrobial resistance profile of Clostridium perfringens from India: A scoping review16
Clostridioides difficile in Latin America: A comprehensive review of literature (1984–2021)16
Changes in the solid-associated bacterial and fungal communities following ruminal in vitro fermentation of winery by-products: aspects of the bioactive compounds and feed safety16
Growth of hydrogenotrophic methanogen Methanoculleus bourgensis MAB1 in the presence of dunite16
Clostridium perfringens epsilon-toxin requires acid sphingomyelinase for cellular entry16
Airborne spores’ dissemination of a swine associated Clostridioides difficile clone16
Impact of MALDI-TOF MS identification on anaerobic species and genus diversity in routine diagnostics16
Peptostreptococcus anaerobius: Pathogenicity, identification, and antimicrobial susceptibility. Review of monobacterial infections and addition of a case of urinary tract infection directly identified15
Novel and rare β-lactamase genes of Bacteroides fragilis group species: Detection of the genes and characterization of their genetic backgrounds15
Antibiotic susceptibility and biofilm-forming ability of Veillonella strains15
Human neutrophils are resistant to Clostridioides difficile toxin B15
Multi-year comparison of VITEK® MS and 16S rRNA gene sequencing performance for the identification of rarely encountered anaerobes causing invasive human infections in a large Canadian region: can our15
Characterization of G-type Clostridium perfringens bacteriophages and their disinfection effect on chicken meat15
Clostridioides difficile toxin B suppresses human neutrophil migration15
A rare cause of bacteremia due to Porphyromonas asaccharolytica in a patient with necrotizing fasciitis15
Increase of healthcare-onset Clostridioides difficile infection in adult population since SARS-CoV-2 pandemic: A retrospective cohort study in a tertiary care hospital from 2019 to 202214
The presence and future of the journal Anaerobe13
Recognizing Cutibacterium acnes as a cause of infectious pericarditis: A case report and review of literature13
Clostridioides difficile: New global perspectives13
Geographical differences in tonsillar carriage rates of Fusobacterium necrophorum – A cross-sectional study in Sweden and Zambia13
A rubrerythrin locus of Clostridioides difficile encodes enzymes that efficiently detoxify reactive oxygen species13
Serine affects engulfment during the sporulation process in Clostridium perfringens strain SM10113
Editorial Board12
Archaea from the gut microbiota of humans: Could be linked to chronic diseases?12
Clostridioides difficile hypervirulent strain ST1 isolated from clinical stool specimens obtained from three Provinces in South Africa12
Rumen and fecal microbial profiles in cattle fed high lignin diets using metagenome analysis12
Evaluation of hydrocortisone as a strain-dependent growth-regulator of Porphyromonas gingivalis12
Microbiological features, epidemiology, and clinical presentation of Clostridioides difficile strains from MLST Clade 2: A narrative review11
Bacteremia due to Parabacteroides distasonis: Experience with 4 cases11
Production of highly soluble and immuno-reactive recombinant flagellin protein of Clostridium chauvoei11
A rare case of necrotizing fasciitis of the abdominal wall due to Hungatella effluvii and Streptococcus constellatus11
Probiotics improve re-epithelialization of scratches infected by Porphyromonas gingivalis through up-regulating CXCL8-CXCR1/CXCR2 axis11
In vitro anti-clostridial action and potential of the spice herbs essential oils to prevent biofilm formation of hypervirulent Clostridioides difficile strains isolated from hospitalized patients with11
In vivo model of Propionibacterium (Cutibacterium) spp. biofilm in Drosophila melanogaster11
Development of a clinical prediction model for recurrence and mortality outcomes after Clostridioides difficile infection using a machine learning approach11
Evaluation of disk diffusion method for testing the rifampicin, erythromycin, and tetracycline susceptibility of Clostridioides (prev. Clostridium) difficile11
Reconsidering the in vivo functions of Clostridial Stickland amino acid fermentations11
Fecal shedding of Clostridioides difficile in calves in Sao Paulo state, Brazil10
Leukotoxin production by Fusobacterium necrophorum strains in relation to severity of liver abscesses in cattle10
Community-associated Clostridioides difficile infection in a general hospital from Argentina10
Brain abscess caused by Porphyromonas gingivalis and Eubacterium nodatum mimicking acute stroke10
Antimicrobial susceptibility of Bacteroides fragilis group organisms in Hong Kong, 2020–202110
A narrative review of Clostridioides difficile infection in China10
A culture-based and culture-independent approach to the study of landfill leachate bacterial and archaeal communities10
Clinical significance of Bacteroides fragilis as a potential prognostic factor in colorectal cancer10
Clinical and microbiological characteristics of Ruminococcus gnavus bacteremia and intra-abdominal infection10
Ruminococcus gnavus bacteremia: Literature review and a case report associated with acute flare of ulcerative colitis in an immunocompromised patient10
Genotypic and phenotypic diversity of carbapenem-resistant Bacteroides fragilis strains collected from different clinical origins9
Clostridioides difficile infection promotes gastrointestinal dysfunction in human and mice post-acute phase of the disease9
Molecular epidemiology of endemic Clostridioides difficile infection in Japan9
Linkage study of surveillance and hospital admission data to investigate Clostridium difficile infection in hospital patients in Perth, Western Australia9
A case of Slackia exigua bacteremia associated with pyometra in a patient with poor dentition9
Clinical usefulness of anaerobic blood culture in pediatric patients with bacteremia9
Risk factors for recurrent healthcare-facility associated Clostridioides difficile infection in a Swedish setting9
Association between the gut and oral microbiome with obesity9
Prevalence of Clostridioides difficile in dogs (Canis familiaris) with gastrointestinal disorders in Rio de Janeiro8
A review of epidemiological models of Clostridioides difficile transmission and control (2009–2021)8
Nonmammalian models to study Clostridioides difficile infection; a systematic review8
Detailed analysis of metabolism reveals growth-rate-promoting interactions between Anaerostipes caccae and Bacteroides spp.8
Oral teicoplanin administration suppresses recurrence of Clostridioides difficile infection: Proof of concept8
Evaluation of different antigenic preparations against necrotic enteritis in broiler birds using a novel Clostridium perfringens type G strain8
Fatal Clostridium septicum myonecrosis from gastric perforation: A case report8
Prevalence of cpe-positive Clostridium perfringens in surface-attached soil of commercially available potatoes and its significance as a potential source of food poisoning8
Improvement of chronic GVHD after oral treatment with Clostridium butyricum (Miya BM)8
Extraintestinal Clostridioides difficile infection: Septic arthritis 12 months after colitis8
Different breakpoints interpretation yielded distinct resistance rates to moxifloxacin of clinically significant anaerobic bacteria8
Bacteremia due to Prevotella oris of probable hepatic origin8
Comparative clinical outcomes evaluation of hospitalized patients infected with Clostridioides difficile ribotype 106 vs. other toxigenic strains8
Detection of co-infection of Gardnerella vaginalis and Atopobium vaginae using qualitative PCR: A better predictor of bacterial vaginosis8
Tribute to Dr. Hebe Mabel Bianchini8
Impact of COVID19 pandemic on the incidence of health-care associated Clostridioides difficile infection8
Fusobacterium ulcerans: from gut to commensal and bacterial translocation?8
Antimicrobial resistance progression in the United Kingdom: A temporal comparison of Clostridioides difficile antimicrobial susceptibilities7
Botulism during SARS-CoV-2 pandemic: The importance of differential diagnoses7
A first case of prosthetic joint infection with Actinomyces radingae7
Clostridioides difficile infection and testing rates in South Africa: A multicentre study, 2017–20207
A rapid genome-proteome approach to identify rate-limiting steps in the butyrate production pathway in probiotic Clostridium butyricum, CBM5887
Septic shock caused by Slackia exigua in a patient with diabetes7
Antimicrobial susceptibility patterns of anaerobic bacteria at an Irish University Hospital over a ten-year period (2010–2020)7
Misidentification of Phocaeicola (Bacteroides) dorei in two patients with bacteremia7
A comparison of the antimicrobial resistance of fecal Bacteroides isolates and assessment of the composition of the intestinal microbiotas of carbapenem-treated and non-treated persons from Belgium an7
Survival of bovine digital dermatitis treponemes in conditions relevant to the host and farm environment7
Transmission of toxigenic Clostridiodes difficile between a pet dog with diarrhea and a 10-month-old infant7
Multiple hepatic and brain abscesses caused by Parvimonas micra: A case report and literature review7
Antibiotic susceptibility screening of primate-associated Clostridium ventriculi7
Clostridioides difficile on dairy farms and potential risk to dairy farm workers7
Fusobacteria behaving badly: Masquerading strains of strictly anaerobic Escherichia coli misidentified due to the deletion of the hemB gene7
Butyricimonas faecihominis and Eubacterium callanderi mixed bloodstream infection after appendicular peritonitis7
Non-steroidal anti-inflammatory drugs are not associated with increased risk of Clostridioides difficile infection: A propensity-score-matched case-control study7
Clostridium septicum endophthalmitis as the first manifestation of a colon adenocarcinoma: A case report7
A cortex-specific penicillin-binding protein contributes to heat resistance in Clostridioides difficile spores7
Incidence of healthcare-associated Clostridioides difficile infection in a quaternary referral university hospital in Brazil7
Biology activity and characterization of the functional L-HN fragment derivative of botulinum neurotoxin serotype E6
Rapid detection and surveillance of cfiA-positive Bacteroides fragilis using matrix-assisted laser desorption ionization time-of-flight mass spectrometry6
Novel transcriptional regulator OxtR1 regulates potential ferrodoxin in response to oxygen stress in Treponema denticola6
Bacteroides fragilis spondylitis after suspected oral ulcer: a clinical case and comprehensive literature review6
An inexpensive anaerobic chamber for the genetic manipulation of strictly anaerobic bacteria6
Clinical and microbiological characteristics of anaerobic bacteremia during 1994–2019: A Danish population-based cohort study6
First case report of Anaerobiospirillum succiniciproducens bacteremia in an HIV-infected patient in Taiwan - Molecular identification from a positive blood culture bottle6
Targeting antibiotic tolerance in anaerobic biofilms associated with oral diseases: Human antimicrobial peptides LL-37 and lactoferricin enhance the antibiotic efficacy of amoxicillin, clindamycin and6
Editorial Board6
Comparison of microbiological profile of enterotoxigenic Bacteroides fragilis (ETBF) isolates from subjects with colorectal cancer (CRC) or intestinal pre-cancerous lesions versus healthy individuals 6
The impact of 30-day antecedent antibiotic exposure on Clostridioides difficile ribotype patterns and the relationship with clinical outcomes: A single center study6
Antimicrobial susceptibility of anaerobic clinical isolates: A two-year surveillance6
Is Bacteroides finegoldii a new bacterial pathogen?6
Clostridioides difficile in food and food products of animal origin in Assam, India6
Editorial Board6
Add-on interventions for the prevention of recurrent Clostridioides Difficile infection: A systematic review and network meta-analysis6
Genetic diversity and phylogenetic analysis of the surface layer protein A gene (slpA) among Clostridioides difficile clinical isolates from Tehran, Iran6
Editorial Board6
Detection of associated bacteria in aspiration pneumonia and lung abscesses using partial 16S rRNA gene amplicon sequencing6
First reported case of Robinsoniella peoriensis pyometra and bloodstream infection: A case report and review of the literature6
The first case of septic arthritis of the knee caused by Eggerthia catenaformis6
Low usefulness of reporting tonsillar PCR Ct-values in pharyngeal infections with Fusobacterium necrophorum6
Establishment of a French surveillance system of Clostridiodes difficile infection: Comparison of patient’s characteristics with other national and European data6
Molecular clock complexities of Clostridioides difficile6
Molecular characterization of Clostridioides difficile by multi-locus sequence typing (MLST): A study from tertiary care center in India6
Clostridioides difficile infection in Africa: A narrative review5
Prevalence and characterization of Clostridium perfringens isolated from different chicken farms in China5
Anaerobiospirillum succiniciproducens prosthetic joint infection5
Pacemaker infection and endocarditis due to Parvimonas micra: A case report and systematic review5
Lactobacillus acidophilus regulates abnormal serotonin availability in experimental ulcerative colitis5
Why foodborne botulism cannot be caused by honey5
Editorial Board5
Cutibacterium avidum: A virulent pathogen in esthetic surgery infection, a case series5
Polymicrobial anaerobic sepsis due to Bacteroides fragilis, Eggerthella lenta, Ruminoccocus gnavus, and Bilophila wadsworthia in a patient with myeloproliferative neoplasm5
Oxalobacter formigenes: A new hope as a live biotherapeutic agent in the management of calcium oxalate renal stones5
Editorial Board5
Characterizing prophages in the genus Fusobacterium5
Association between Bacteroides fragilis and Fusobacterium nucleatum infection and colorectal cancer in Vietnamese patients5
Metabolism of azo food dyes by bacterial members of the human gut microbiome5
Upregulation of the cfiA carbapenemase gene in a Bacteroides fragilis strain by the novel integrative and conjugative element Tn75635
Predominance of Clostridioides difficile PCR ribotype 181 in northern Greece, 2016–20195
Antimicrobial susceptibility profiles of invasive isolates of anaerobic bacteria from a large Canadian reference laboratory: 2012–20195
Clinical anaerobic infections in an Indian tertiary care hospital: A two-year retrospective study5
Gas gangrene caused by spontaneous Clostridium septicum infection: A case study5
A significant decreased in the frequency of Clostridioides difficile infection at the Italian Hospital of Desio over the last decade5
First reported case of Lachnoanaerobaculum gingivalis bacteremia in an acute myeloid leukemia patient with oral mucositis during high dose chemotherapy5
Editorial Board5
Brain abscess caused by Parvimonas micra: A rare case report and literature review5
Risk factors of first recurrence of Clostridioides difficile infection5
Effects of different culture media on growth of Treponema spp. isolated from digital dermatitis4
Late onset prosthetic joint infection caused by Parvimonas micra4
Implementation of a Clostridioides difficile sentinel surveillance system in Germany: First insights for 2019–20214
The first case of Veillonella atypica bacteremia in a patient with renal pelvic tumor4
Bioaugmentation with methanogens cultured in a micro-aerobic microbial community for overloaded anaerobic digestion recovery4
Chalcones with potential antibacterial and antibiofilm activities against periodontopathogenic bacteria4
Chitin promotes equol production via -acetylglucosamine in human fecal cultures4
Septic arthritis caused by Desulfovibrio desulfuricans: A case report and review of the literature4
Appropriate cleaning reduces potential risk of spore transmission from patients with Clostridioides difficile infection treated in outpatient infusion centers4
Evaluation of loop-mediated isothermal amplification assay for detection of Clostridioides difficile infection: A prospective diagnostic performance study4
The impact of existing total anti-toxin B IgG immunity in outcomes of recurrent Clostridioides difficile infection4
Two cases of Clostridium ramosum bacteremia with intestinal perforation: The antimicrobial susceptibility of clinical strains4
Characterization of the oxidative stress response regulatory network in Bacteroides fragilis: An interaction between BmoR and OxyR regulons promotes abscess formation in a model of intra-abdominal inf4
Impact of smokeless tobacco-associated bacteriome in oral carcinogenesis4
Bactericidal activity of a substituted thiazole against multidrug-resistant Eggerthia catenaformis isolated from patients with dental abscess4
Etiology and antimicrobial susceptibility profiles of anaerobic bacteria isolated from clinical samples in a university hospital in Madrid, Spain4
Characterization of mobile genetic elements in multidrug-resistant Bacteroides fragilis isolates from different hospitals in the Netherlands4
Editorial Board4
The comparison of changes in fecal and mucosal microbiome in metabolic endotoxemia induced by a high-fat diet4
The growth-stimulating factor of Treponema phagedenis from bovine digital dermatitis lesions4
Microscopy methods for Clostridioides difficile4
Oxygen exposure decreases the yield of high-molecular-weight DNA from some anaerobic bacteria and bacterial communities during DNA extraction4
Antimicrobial susceptibility testing of Bacteroides species by disk diffusion: The NordicAST Bacteroides study4
OxyR inactivation reduces the growth rate and oxidative stress defense in Capnocytophaga ochracea4
Clostridioides difficile infection (CDI) during the COVID-19 pandemic4
Regulatory networks: Linking toxin production and sporulation in Clostridioides difficile4
Initial expression levels of nimA are decisive for protection against metronidazole in Bacteroides fragilis3
Clostridioides difficile in raw mechanically separated poultry meat and pasteurized product made from contaminated meat3
Editorial Board3
Pauci-symptomatic foodborne botulism due to Clostridium botulinum type B with predominant ophthalmologic presentation possibly after consumption of honey3
Efficacy of bezlotoxumab to prevent recurrent Clostridioides difficile infection (CDI) in patients with multiple prior recurrent CDI3
Rapid release of sepsis markers heparin-binding protein and calprotectin triggered by anaerobic cocci poses an underestimated threat3
Colitis caused by Clostridioides difficile infection in a domestic dog: A case report3
Clostridioides difficile spores stimulate inflammatory cytokine responses and induce cytotoxicity in macrophages3
Two cases of bacteremic pneumonia caused by Bifidobacterium species3
Enhancing biogas generation from lignocellulosic biomass through biological pretreatment: Exploring the role of ruminant microbes and anaerobic fungi3
High prevalence of cfiA positive Bacteroides fragilis isolates collected at a teaching hospital in Hohhot, China3
Community-onset Clostridioides difficile infection in south Serbia3
Butyricimonas paravirosa bacteremia associated with acute terminal ileitis: Case report and literature review3
Identification of cfxA gene variants and susceptibility patterns in β-lactamase-producing Prevotella strains3
Identification of root canal microbiota profiles of periapical tissue diseases using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry3
Bacteroides vicugnae sp. nov. isolated from the fecal material of an alpaca3
First case of abdominal infection caused by bacteroides fluxus3
The role of Actinomyces spp. and related organisms in cervicofacial infections: Pathomechanism, diagnosis and therapeutic aspects3
Editorial Board3
Coculture systems to study interactions between anaerobic bacteria and intestinal epithelium3
Editorial Board3
Intra-spinal abscess due to Bacteroides fragilis and Klebsiella pneumoniae co-infection in a child with spinal dysraphism3
Editorial Board3
Clostridioides difficile infection in patients with and without COVID-19 during the pandemic: A retrospective cohort study from a tertiary referral hospital3
Serum IgM antibody response to Clostridioides difficile polysaccharide PS-II vaccination in pony foals3
Clostridium innocuum: Microbiological and clinical characteristics of a potential emerging pathogen3
Fecal microbiota transplantation as therapy for recurrent Clostridioides difficile infection is associated with amelioration of delirium and accompanied by changes in fecal microbiota and the metabolo3
Characterization of the components of the thioredoxin system in Bacteroides fragilis and evaluation of its activity during oxidative stress3
Development of two recombinant vaccines against Clostridioides difficile infection and immunogenicity in pregnant sows and neonatal piglets3
Differences between bloodstream infections involving Gram-positive and Gram-negative anaerobes3
Antimicrobial effects of cannabidiol on select agriculturally important Clostridia3
Clostridium paraputrificum bacteremia in a 64-year-old woman with colon carcinoma3
Production and purification of Clostridium perfringens type D epsilon toxin and IgY antitoxin3
Mechanisms of intestinal epithelial cell damage by Clostridium perfringens3
Type IV pili facilitated natural competence in Fusobacterium nucleatum3
Detection of methanogens in peri-appendicular abscesses: Report of four cases3
Diagnosis, treatment and prognosis of otomastoiditis induced by Fusobacterium necrophorum: A retrospective multicentre cohort study3
Bacteroides fragilis vertebral osteomyelitis: A rare clinical entity3
Low Clostridioides difficile positivity rate in wild animal shelter in Slovenia3
Bacteroides and related species: The keystone taxa of the human gut microbiota3
Fecal microbiota transplantation stimulates type 2 and tolerogenic immune responses in a mouse model3
Comment on “Antimicrobial susceptibility of Bacteroides fragilis group organisms in Hong Kong, 2020–2021”3
Native joint infections caused by Parvimonas micra3
Walk before you run: Feasibility challenges and lessons learned from the PROCLAIM study, a multicenter randomized controlled trial of misoprostol for prevention of recurrent Clostridioides difficile d3
Fusobacterium watanabei sp. nov. As additional species within the genus Fusobacerium, isolated from human clinical specimens3
Clostridioides difficile is a Bacterial Priority Pathogen3
Obituary of J. Glenn Songer (1950–2021)3
First large-scale study of antimicrobial susceptibility data, and genetic resistance determinants, in Fusobacterium necrophorum highlighting the importance of continuing focused susceptibility trend s3
Optimization of CO fermentation by Clostridium carboxidivorans in batch reactors: Effects of the medium composition3
A subanalysis of Clostridium perfringens bloodstream infections from a 5-year retrospective nationwide survey (ITANAEROBY)3
Impact of the COVID-19 pandemic on the incidence of healthcare facility-onset Clostridioides difficile infection in hospitalized patients with sepsis: Interrupted time series analysis using Japanese D3
Isolation, toxinotyping and antimicrobial susceptibility testing of Clostridium perfringens isolated from Pakistan poultry3
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