Journal of the American Medical Informatics Association

Article	Citations
Multi-faceted analysis and prediction for the outbreak of pediatric respiratory syncytial virus	306
Enhancing patient representation learning with inferred family pedigrees improves disease risk prediction	174
“Goldmine” or “big mess”? An interview study on the challenges of designing, operating, and ensuring the durability of Clinical Data Warehouses in France and Belgium	163
Using Twitter data to understand public perceptions of approved versus off-label use for COVID-19-related medications	132
Utilizing patient-nurse verbal communication in building risk identification models: the missing critical data stream in home healthcare	104
Self-supervised machine learning using adult inpatient data produces effective models for pediatric clinical prediction tasks	83
What did you do to avoid the climate disaster? A call to arms for health informatics	82
Designing visual hierarchies for the communication of health data	82
Identifying family structures from obituaries and matching them to patients in an electronic heath record	80
Interpretable machine learning for identifying ICU readmission risk in subgroups with probabilistic rules	79
Transparent deep learning to identify autism spectrum disorders (ASD) in EHR using clinical notes	77
Uncovering hidden trends: identifying time trajectories in risk factors documented in clinical notes and predicting hospitalizations and emergency department visits during home health care	77
Challenges using electronic health records to support unhealthy alcohol use screening and intervention in primary care practices in the Pacific Northwest	74
CARE-SD: classifier-based analysis for recognizing provider stigmatizing and doubt marker labels in electronic health records: model development and validation	73
Genetic data normalization for genomic medicine: a Fast Healthcare Interoperability Resources Genomics reference implementation	70
Evaluating resources composing the PheMAP knowledge base to enhance high-throughput phenotyping	69
All of whom? Limitations encountered using All of Us Researcher Workbench in a Primary Care residents secondary data analysis research training block	66
Building an allergy reconciliation module to eliminate allergy discrepancies in electronic health records	66
Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions	59
Compliance and factuality of large language models for clinical research document generation	58
A framework for understanding label leakage in machine learning for health care	53
The added value of text from Dutch general practitioner notes in predictive modeling	48
Clickbusters letter response	44
Association between state payment parity policies and telehealth usage at community health centers during COVID-19	44
Letter to the editors in response to “Leveraging artificial intelligence to summarize abstracts in lay language for increasing research accessibility and transparency”	43

Foundational domains and competencies for baccalaureate health informatics education	43
Distributed, immutable, and transparent biomedical limited data set request management on multi-capacity network	43
Growth curve modeling of virtual events and online engagement in a palliative care peer support online health community for adolescents and young adults	41
Variations in digital health literacy for pediatric caregivers of hospitalized children: implications for digital health equity	41
Predicting mortality in hospitalized influenza patients: integration of deep learning-based chest X-ray severity score (FluDeep-XR) and clinical variables	41
Reply to Layne et al.’s Letter to the Editor	41
Long-term care plan recommendation for older adults with disabilities: a bipartite graph transformer and self-supervised approach	39
Reformulating patient stratification for targeting interventions by accounting for severity of downstream outcomes resulting from disease onset: a case study in sepsis	39
CDEMapper: enhancing National Institutes of Health common data element use with large language models	39
Electronic health record-supported implementation of an evidence-based pathway for perioperative surgical care	38
Preparing for the bedside—optimizing a postpartum depression risk prediction model for clinical implementation in a health system	38
Efficacy of the mLab App: a randomized clinical trial for increasing HIV testing uptake using mobile technology	38
Regulation of artificial intelligence in healthcare: Clinical Laboratory Improvement Amendments (CLIA) as a model	37
The ongoing French BaMaRa-BNDMR cohort: implementation and deployment of a nationwide information system on rare disease	37
Using automated methods to detect safety problems with health information technology: a scoping review	37
The incremental design of a machine learning framework for medical records processing	37
Accuracy of ICD-10-CM encounter diagnoses from health records for identifying self-harm events	37
Data-driven automated classification algorithms for acute health conditions: applying PheNorm to COVID-19 disease	36
Comparing penalization methods for linear models on large observational health data	35
Developing electronic clinical quality measures to assess the cancer diagnostic process	35
Tablet distribution to veterans: an opportunity to increase patient portal adoption and use	35
Retrospective analysis of the impact of electronic medical record alerts on low value care in a pediatric hospital	34
The role of health system penetration rate in estimating the prevalence of type 1 diabetes in children and adolescents using electronic health records	33
Association of physician burnout with perceived EHR work stress and potentially actionable factors	33
RefAI: a GPT-powered retrieval-augmented generative tool for biomedical literature recommendation and summarization	33
Equity implications of extended reality technologies for health and procedural anxiety: a systematic review and implementation-focused framework	32
Digital interventions for antimicrobial prescribing and monitoring: a qualitative meta-synthesis of factors influencing user acceptance	31
Development and validation of a multi-stage self-supervised learning model for optical coherence tomography image classification	31
myAURA: a personalized health library for epilepsy management via knowledge graph sparsification and visualization	31
Automatically pre-screening patients for the rare disease aromatic l-amino acid decarboxylase deficiency using knowledge engineering, natural language processing, and machine learning on a	31
Characterizing variability of electronic health record-driven phenotype definitions	30
Exploring home healthcare clinicians’ needs for using clinical decision support systems for early risk warning	30
A communication-efficient federated learning algorithm to assess racial disparities in post-transplantation survival time	30
Returning value to the community through the All of Us Research Program Data Sandbox model	30
Variation in pediatric and adolescent electronic health data sharing practices under the 21st Century Cures Act	29
Clinical decision support malfunctions related to medication routes: a case series	29
Learning competing risks across multiple hospitals: one-shot distributed algorithms	29
Deploying a national clinical text processing infrastructure	29
Bridging the gap in author names: building an enhanced author name dataset for biomedical literature system	29
JAMIA at 30: looking back and forward	28
Prediction of multiclass surgical outcomes in glaucoma using multimodal deep learning based on free-text operative notes and structured EHR data	28
Constructing knowledge: the role of AI in medical learning	28
Comparison of phenomic profiles in the All of Us Research Program against the US general population and the UK Biobank	27
Generative AI in orthopedics: an explainable deep few-shot image augmentation pipeline for plain knee radiographs and Kellgren-Lawrence grading	27
High-performance automated abstract screening with large language model ensembles	27
AMIA’s code of professional and ethical conduct 2022	27
Can large language models provide secondary reliable opinion on treatment options for dermatological diseases?	26
Patient and researcher stakeholder preferences for use of electronic health record data: a qualitative study to guide the design and development of a platform to honor patient preferences	26
AI in health: keeping the human in the loop	26
Identifying stigmatizing and positive/preferred language in obstetric clinical notes using natural language processing	26

Machine learning-based prediction models in medical decision-making in kidney disease: patient, caregiver, and clinician perspectives on trust and appropriate use	26
Dobbs and the future of health data privacy for patients and healthcare organizations	26
Correction to: Association between state payment parity policies and telehealth usage at community health centers during COVID-19	25
Reducing diagnostic delays in acute hepatic porphyria using health records data and machine learning	25
Potential bias and lack of generalizability in electronic health record data: reflections on health equity from the National Institutes of Health Pragmatic Trials Collaboratory	25
21st Century Cures Act: ethical recommendations for new patient-facing products	25
Comparative effectiveness of generic commercial versus locally customized clinical decision support tools to reduce prescription of nonsteroidal anti-inflammatory drugs for patients with heart failure	25
The substance-exposed birthing person-infant/child dyad and health information exchange in the United States	25
Targeted messaging to improve the adoption of clinical decision support for prescription drug monitoring program use	25
Deep learning algorithms to detect diabetic kidney disease from retinal photographs in multiethnic populations with diabetes	25
Informatics innovation to provide return of value to participant communities in the All of Us Research Program	24
The value of parental medical records for the prediction of diabetes and cardiovascular disease: a novel method for generating and incorporating family histories	24
Real world performance of the 21st Century Cures Act population-level application programming interface	23
Seeing things the same way: perspectives and lessons learned from research-design collaborations	23
Toward digital twins in the intensive care unit: a medication management case study	23
Knowledge infrastructure: a priority to accelerate workflow automation in health care	23
Transfer-learning on federated observational healthcare data for prediction models using Bayesian sparse logistic regression with informed priors	22
Disparities in seizure outcomes revealed by large language models	22
Do patients who read visit notes on the patient portal have a higher rate of “loop closure” on diagnostic tests and referrals in primary care? A retrospective cohort study	22
A call for better validation of opioid overdose risk algorithms	22
Using electronic health record audit log data for research: insights from early efforts	22
A span-based model for extracting overlapping PICO entities from randomized controlled trial publications	21
Performance drift in a mortality prediction algorithm among patients with cancer during the SARS-CoV-2 pandemic	21
Supporting clinical reasoning through visual summarization and presentation of patient data: a systematic review	21
PMC-LLaMA: toward building open-source language models for medicine	21
Diagnostic accuracy differences in detecting wound maceration between humans and artificial intelligence: the role of human expertise revisited	21
Leveraging explainable artificial intelligence to optimize clinical decision support	21
A standards-based approach to digital health research: implementing the people heart study	21
Correction to: Deep learning algorithms to detect diabetic kidney disease from retinal photographs in multiethnic populations with diabetes	20
Predicting treatment retention in medication for opioid use disorder: a machine learning approach using NLP and LLM-derived clinical features	20
Electronic health record “gag clauses” and the prevalence of screenshots in peer-reviewed literature	20
A novel hyperparameter search approach for accuracy and simplicity in disease prediction risk scoring	20
Local large language models for privacy-preserving accelerated review of historic echocardiogram reports	20
Harnessing the potential of large language models in medical education: promise and pitfalls	20
Acute myocardial infarction prognosis prediction with reliable and interpretable artificial intelligence system	20
Perspectives on the role of industry in informatics research and authorship	20
Evaluating the validity of the nursing statements algorithmically generated based on the International Classifications of Nursing Practice for respiratory nursing care using large language models	20
SNOMED CT entity linking challenge	20
Computational simulation of the potential improvement in clinical outcomes of cardiovascular diseases with the use of a personalized predictive medicine approach	20
Correction to: De-black-boxing health AI: demonstrating reproducible machine learning computable phenotypes using the N3C-RECOVER Long COVID model in the All of Us data repository	20
Enabling inclusive systematic reviews: incorporating preprint articles with large language model-driven evaluations	19
Equitable community-based participatory research engagement with communities of color drives All of Us Wisconsin genomic research priorities	19
Large language models for biomedicine: foundations, opportunities, challenges, and best practices	19
Derivation and validation of an algorithm for maternal–child linkage in electronic health records	19
Electronic patient-reported outcome measures for triaging and scheduling outpatient appointments: a systematic review and meta-analysis	19
Envisioning the future of primary care: intervention strategies to support patient-centered communication feedback technology	19
Using event logs to observe interactions with electronic health records: an updated scoping review shows increasing use of vendor-derived measures	19
A marker-based neural network system for extracting social determinants of health	19
Transport-based transfer learning on Electronic Health Records: application to detection of treatment disparities	19
Communicating research findings as a return of value to All of Us Research Program participants: insights from staff at Federally Qualified Health Centers	19
LEAP: LLM instruction-example adaptive prompting framework for biomedical relation extraction	19
Promoting interoperability between SNOMED CT and ICD-11: lessons learned from the pilot project mapping between SNOMED CT and the ICD-11 Foundation	19
Correction to: In with the old, in with the new: machine learning for time to event biomedical research	18
Keeping synthetic patients on track: feedback mechanisms to mitigate performance drift in longitudinal health data simulation	18
VIEWER: an extensible visual analytics framework for enhancing mental healthcare	18
Pivotal trial of a deep-learning-based retinal biomarker (Reti-CVD) in the prediction of cardiovascular disease: data from CMERC-HI	18
Markov modeling for cost-effectiveness using federated health data network	18
Dementia and electronic health record phenotypes: a scoping review of available phenotypes and opportunities for future research	18
Machine learning-based infection diagnostic and prognostic models in post-acute care settings: a systematic review	17
Impact of artificial intelligence on pathologists’ decisions: an experiment	17
Search still matters: information retrieval in the era of generative AI	17
Development of electronic health record based algorithms to identify individuals with diabetic retinopathy	17
Leveraging large language models to foster equity in healthcare	17
The role of electronic health record developers in hospital patient sharing	17
Large language models accurately identify immunosuppression in intensive care unit patients	17
Machine learning classification of diagnostic accuracy in pathologists interpreting breast biopsies	17
Extracting social support and social isolation information from clinical psychiatry notes: comparing a rule-based natural language processing system and a large language model	17
Partnering with patients and families living with chronic conditions to coproduce diagnostic safety through OurDX: a previsit online engagement tool	16
Selective prediction for extracting unstructured clinical data	16
Comprehension, utility, and preferences of prostate cancer survivors for visual timelines of patient-reported outcomes co-designed for limited graph literacy: meters and emojis over comics	16
Prediction of postoperative infections by strategic data imputation and explainable machine learning	16
Leveraging artificial intelligence to summarize abstracts in lay language for increasing research accessibility and transparency	16
Generating colloquial radiology reports with large language models	16
Machine learning based prediction of medication adherence in heart failure using large electronic health record cohort with linkages to pharmacy-fill and neighborhood-level data	16
The potential and limitations of large language models in identification of the states of motivations for facilitating health behavior change	16
BioInstruct: instruction tuning of large language models for biomedical natural language processing	16
Utilization patterns and efficiency gains from use of a fully EHR-integrated COVID-19 self-triage and self-scheduling tool: a retrospective analysis	16
Integrating human-centered design in public health data dashboards: lessons from the development of a data dashboard of sexually transmitted infections in New York State	16
Automatic segmentation of atrial fibrillation and flutter in single-lead electrocardiograms by self-supervised learning and Transformer architecture	15
A randomized controlled trial of generic and localized MedlinePlus-based information resources for hard-to-reach urban Hispanic community	15

Assessing health literacy and diversity within the All of Us Research Program	15
Translating and evaluating historic phenotyping algorithms using SNOMED CT	15
Trading-off privacy and utility: the Washington State experience assessing the performance of a public health digital exposure notification system for coronavirus disease 2019	15
Transforming and evaluating the UK Biobank to the OMOP Common Data Model for COVID-19 research and beyond	15
Methodologies and key considerations for implementing the International Classification of Diseases-11th revision morbidity coding: insights from a national pilot study in China	15
“I don’t think it should take you three days to tell me my baby is dead.” A case of fetal demise: unintended consequences of immediate release of information	15
LCD benchmark: long clinical document benchmark on mortality prediction for language models	15
Comparison of six natural language processing approaches to assessing firearm access in Veterans Health Administration electronic health records	15
Enterprise-wide simultaneous deployment of ambient scribe technology: lessons learned from an academic health system	15
The use of artificial intelligence to optimize medication alerts generated by clinical decision support systems: a scoping review	15
Combining uncertainty-aware predictive modeling and a bedtimeSmart Snackintervention to prevent nocturnal hypoglycemia in people with type 1 diabetes on multiple daily injections	14
Visualizing machine learning-based predictions of postpartum depression risk for lay audiences	14
Safety risks and workflow implications associated with nursing-related free-text communication orders	14
Community engagement in the development of health-related data visualizations: a scoping review	14
The impact of the COVID-19 pandemic on daily rhythms	14
Use of calibration to improve the precision of estimates obtained from All of Us data	14
Evaluation of the impact of defining observable time in real-world data on outcome incidence	14
Building a collaborative cloud platform to accelerate heart, lung, blood, and sleep research	14
PheMIME: an interactive web app and knowledge base for phenome-wide, multi-institutional multimorbidity analysis	14
Nonexercise machine learning models for maximal oxygen uptake prediction in national population surveys	14
A novel approach to patient portal activation data to power equity improvements	14
Assessing the impact of privacy-preserving record linkage on record overlap and patient demographic and clinical characteristics in PCORnet®, the National Patient-Centered Clinical Research Network	14
Dynamic prediction of work status for workers with occupational injuries: assessing the value of longitudinal observations	14
Do electronic health record systems “dumb down” clinicians?	14
Applying anti-racist approaches to informatics: a new lens on traditional frames	14
Scanning the medical phenome to identify new diagnoses after recovery from COVID-19 in a US cohort	14
Mapping the delineation of practice to the AMIA foundational domains for applied health informatics	14
Strengthening the use of artificial intelligence within healthcare delivery organizations: balancing regulatory compliance and patient safety	14
Biomedical blockchain with practical implementations and quantitative evaluations: a systematic review	14
An exploratory analysis of SNOMED CT national editions	14
Implementation and impact of an electronic patient reported outcomes system in a phase II multi-site adaptive platform clinical trial for early-stage breast cancer	13
Considerations for development of child abuse and neglect phenotype with implications for reduction of racial bias: a qualitative study	13
Generating synthetic electronic health record data: a methodological scoping review with benchmarking on phenotype data and open-source software	13
VACtrac: enhancing access immunization registry data for population outreach using the Bulk Fast Healthcare Interoperable Resource (FHIR) protocol	13
A national survey of digital health company experiences with electronic health record application programming interfaces	13
CoRTEx: contrastive learning for representing terms via explanations with applications on constructing biomedical knowledge graphs	13
National COVID Cohort Collaborative data enhancements: a path for expanding common data models	13
A perspective on individualized treatment effects estimation from time-series health data	13
Deep sequential neural network models improve stratification of suicide attempt risk among US veterans	13
Automated deidentification of radiology reports combining transformer and “hide in plain sight” rule-based methods	13
Impact of wearable device data and multi-scale entropy analysis on improving hospital readmission prediction	13
Improving suicide risk prediction via targeted data fusion: proof of concept using medical claims data	13
Hillclimb-Causal Inference: a data-driven approach to identify causal pathways among parental behaviors, genetic risk, and externalizing behaviors in children	13
Design of an interface to communicate artificial intelligence-based prognosis for patients with advanced solid tumors: a user-centered approach	13
Establishing and implementing a responsible artificial intelligence framework: a 1-year review	13
Ambient artificial intelligence scribes: physician burnout and perspectives on usability and documentation burden	12
REDCap and the National Mesothelioma Virtual Bank—a scalable and sustainable model for rare disease biorepositories	12
Including AI in diffusion-weighted breast MRI has potential to increase reader confidence and reduce workload	12
Deployment of machine learning algorithms to predict sepsis: systematic review and application of the SALIENT clinical AI implementation framework	12
Post-implementation optimization of medication alerts in hospital computerized provider order entry systems: a scoping review	12
Beyond the individual	12
Revisions to the Safety Assurance Factors for Electronic Health Record Resilience (SAFER) Guides to update national recommendations for safe use of electronic health records	12
A powerful partnership: researchers and patients working together to develop a patient-facing summary of clinical trial outcome data	12
Toward a unified understanding of drug-drug interactions: mapping Japanese drug codes to RxNorm concepts	12
To the editor of JAMIA	12
Identifying infected patients using semi-supervised and transfer learning	12
Correction to: Dobbs and the future of health data privacy for patients and healthcare organizations	12
A call for the informatics community to define priority practice and research areas at the intersection of climate and health: report from 2023 mini-summit	12
Bridging the digital health divide—patient experiences with mobile integrated health and facilitated telehealth by community-level indicators of health disparity	12
Innovative informatics interventions to improve health and health care	12
Standards and frameworks	12
A messaging standard for environmental inspections: is it time?	12
Digital vaccine passports and digital health diplomacy: an online model WHO simulation	12
Social media use and mental health among older adults with multimorbidity: the role of self-care efficacy	11
FairICP: identifying biases and increasing transparency at the point of care in post-implementation clinical decision support using inductive conformal prediction	11
Beyond Phecodes: leveraging PheMAP to identify patients lacking diagnosis codes in electronic health records	11
“Are we there yet?” Ten persistent hazards and inefficiencies with the use of medication administration technology from the perspective of practicing nurses	11
Correction to: Barriers and facilitators to the implementation of family cancer history collection tools in oncology clinical practices	11
Curating a longitudinal research resource using linked primary care EHR data—a UK Biobank case study	11
Use of chosen names in electronic health records to promote transgender inclusivity	11
Strengths, weaknesses, opportunities, and threats for the nation’s public health information systems infrastructure: synthesis of discussions from the 2022 ACMI Symposium	11
An interactive fitness-for-use data completeness tool to assess activity tracker data	11
A question-answering framework for automated abstract screening using large language models	11
quEHRy: a question answering system to query electronic health records	11
Machine learning approaches for electronic health records phenotyping: a methodical review	11
Guidance for reporting analyses of metadata on electronic health record use	11
The real-world impact of artificial intelligence ethics frameworks across a decade in healthcare: a scoping review	11
In vitro to in vivo translation of artificial intelligence for clinical use: screening for acute coronary syndrome to identify ST-elevation myocardial infarction	11
Factors impacting electronic patient-generated data use in safety-net systems: a qualitative study	11
Distilling large language models for matching patients to clinical trials	11
Enhancing the nation’s public health information infrastructure: a report from the ACMI symposium	11
Evaluating the accuracy of a state-of-the-art large language model for prediction of admissions from the emergency room	11
Is the patient speaking or the nurse? Automatic speaker type identification in patient–nurse audio recordings	11