Journal of the American Medical Informatics Association

Article	Citations
Multi-faceted analysis and prediction for the outbreak of pediatric respiratory syncytial virus	362
“Goldmine” or “big mess”? An interview study on the challenges of designing, operating, and ensuring the durability of Clinical Data Warehouses in France and Belgium	246
Evaluating resources composing the PheMAP knowledge base to enhance high-throughput phenotyping	241
Designing visual hierarchies for the communication of health data	136
What did you do to avoid the climate disaster? A call to arms for health informatics	134
CARE-SD: classifier-based analysis for recognizing provider stigmatizing and doubt marker labels in electronic health records: model development and validation	128
Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions	128
All of whom? Limitations encountered using All of Us Researcher Workbench in a Primary Care residents secondary data analysis research training block	125
Utilizing patient-nurse verbal communication in building risk identification models: the missing critical data stream in home healthcare	118
The added value of text from Dutch general practitioner notes in predictive modeling	114
Self-supervised machine learning using adult inpatient data produces effective models for pediatric clinical prediction tasks	107
Systematic review of foundation models for structured electronic health records	106
Building an allergy reconciliation module to eliminate allergy discrepancies in electronic health records	104
Using Twitter data to understand public perceptions of approved versus off-label use for COVID-19-related medications	102
Enhancing patient representation learning with inferred family pedigrees improves disease risk prediction	98
Identifying family structures from obituaries and matching them to patients in an electronic heath record	93
Challenges using electronic health records to support unhealthy alcohol use screening and intervention in primary care practices in the Pacific Northwest	92
Interpretable machine learning for identifying ICU readmission risk in subgroups with probabilistic rules	86
Transparent deep learning to identify autism spectrum disorders (ASD) in EHR using clinical notes	83
A framework for understanding label leakage in machine learning for health care	75
Uncovering hidden trends: identifying time trajectories in risk factors documented in clinical notes and predicting hospitalizations and emergency department visits during home health care	72
Genetic data normalization for genomic medicine: a Fast Healthcare Interoperability Resources Genomics reference implementation	72
Association between state payment parity policies and telehealth usage at community health centers during COVID-19	72
Identifying key user experience and technical features for sustained use of unguided chatbots for health-related behavior change: a systematic review	66
Compliance and factuality of large language models for clinical research document generation	66

Letter to the editors in response to “Leveraging artificial intelligence to summarize abstracts in lay language for increasing research accessibility and transparency”	65
Clickbusters letter response	65
Reply to Layne et al.’s Letter to the Editor	64
Comparing penalization methods for linear models on large observational health data	61
CDEMapper: enhancing National Institutes of Health common data element use with large language models	60
Preparing for the bedside—optimizing a postpartum depression risk prediction model for clinical implementation in a health system	59
Growth curve modeling of virtual events and online engagement in a palliative care peer support online health community for adolescents and young adults	58
Using automated methods to detect safety problems with health information technology: a scoping review	57
Tablet distribution to veterans: an opportunity to increase patient portal adoption and use	54
Accuracy of ICD-10-CM encounter diagnoses from health records for identifying self-harm events	53
Electronic health record-supported implementation of an evidence-based pathway for perioperative surgical care	52
The incremental design of a machine learning framework for medical records processing	51
Retrospective analysis of the impact of electronic medical record alerts on low value care in a pediatric hospital	51
Developing electronic clinical quality measures to assess the cancer diagnostic process	50
Predicting mortality in hospitalized influenza patients: integration of deep learning-based chest X-ray severity score (FluDeep-XR) and clinical variables	49
The role of health system penetration rate in estimating the prevalence of type 1 diabetes in children and adolescents using electronic health records	49
Long-term care plan recommendation for older adults with disabilities: a bipartite graph transformer and self-supervised approach	48
Efficacy of the mLab App: a randomized clinical trial for increasing HIV testing uptake using mobile technology	48
Regulation of artificial intelligence in healthcare: Clinical Laboratory Improvement Amendments (CLIA) as a model	48
Variations in digital health literacy for pediatric caregivers of hospitalized children: implications for digital health equity	47
Data-driven automated classification algorithms for acute health conditions: applying PheNorm to COVID-19 disease	47
Implementation of a clinical decision support tool for hypertension in a rural health system	47
Distributed, immutable, and transparent biomedical limited data set request management on multi-capacity network	47
Association of physician burnout with perceived EHR work stress and potentially actionable factors	45
Reformulating patient stratification for targeting interventions by accounting for severity of downstream outcomes resulting from disease onset: a case study in sepsis	45
RefAI: a GPT-powered retrieval-augmented generative tool for biomedical literature recommendation and summarization	44
Foundational domains and competencies for baccalaureate health informatics education	44
Patient and researcher stakeholder preferences for use of electronic health record data: a qualitative study to guide the design and development of a platform to honor patient preferences	43
Impact of announced wait time information on emergency department overcrowding mitigation: a simulation study	43
A communication-efficient federated learning algorithm to assess racial disparities in post-transplantation survival time	43
Can large language models provide secondary reliable opinion on treatment options for dermatological diseases?	43
Variation in pediatric and adolescent electronic health data sharing practices under the 21st Century Cures Act	43
Development and validation of a multi-stage self-supervised learning model for optical coherence tomography image classification	42
Returning value to the community through the All of Us Research Program Data Sandbox model	42
Comparative effectiveness of generic commercial versus locally customized clinical decision support tools to reduce prescription of nonsteroidal anti-inflammatory drugs for patients with heart failure	41
Clinical decision support malfunctions related to medication routes: a case series	41
Characterizing variability of electronic health record-driven phenotype definitions	41
Learning competing risks across multiple hospitals: one-shot distributed algorithms	41
Deploying a national clinical text processing infrastructure	40
Digital interventions for antimicrobial prescribing and monitoring: a qualitative meta-synthesis of factors influencing user acceptance	40
AMIA’s code of professional and ethical conduct 2022	40
Prediction of multiclass surgical outcomes in glaucoma using multimodal deep learning based on free-text operative notes and structured EHR data	39
Automatically pre-screening patients for the rare disease aromatic l-amino acid decarboxylase deficiency using knowledge engineering, natural language processing, and machine learning on a	39
Bridging the gap in author names: building an enhanced author name dataset for biomedical literature system	39
Machine learning-based prediction models in medical decision-making in kidney disease: patient, caregiver, and clinician perspectives on trust and appropriate use	38
Equity implications of extended reality technologies for health and procedural anxiety: a systematic review and implementation-focused framework	38
Generative AI in orthopedics: an explainable deep few-shot image augmentation pipeline for plain knee radiographs and Kellgren-Lawrence grading	37
Constructing knowledge: the role of AI in medical learning	37
From use cases to infrastructure: a cross-institutional survey of priorities in data-driven biomedical research	36
Exploring home healthcare clinicians’ needs for using clinical decision support systems for early risk warning	36

JAMIA at 30: looking back and forward	36
High-performance automated abstract screening with large language model ensembles	36
Identifying stigmatizing and positive/preferred language in obstetric clinical notes using natural language processing	36
Deep learning algorithms to detect diabetic kidney disease from retinal photographs in multiethnic populations with diabetes	36
Comparison of phenomic profiles in the All of Us Research Program against the US general population and the UK Biobank	36
myAURA : a personalized health library for epilepsy management via knowledge graph sparsification and visualization	35
AI in health: keeping the human in the loop	35
Potential bias and lack of generalizability in electronic health record data: reflections on health equity from the National Institutes of Health Pragmatic Trials Collaboratory	35
Dobbs and the future of health data privacy for patients and healthcare organizations	35
The substance-exposed birthing person-infant/child dyad and health information exchange in the United States	34
The value of parental medical records for the prediction of diabetes and cardiovascular disease: a novel method for generating and incorporating family histories	34
Correction to: Association between state payment parity policies and telehealth usage at community health centers during COVID-19	34
Informatics innovation to provide return of value to participant communities in the All of Us Research Program	34
Seeing things the same way: perspectives and lessons learned from research-design collaborations	33
Knowledge infrastructure: a priority to accelerate workflow automation in health care	33
Acute myocardial infarction prognosis prediction with reliable and interpretable artificial intelligence system	33
A standards-based approach to digital health research: implementing the people heart study	33
Reducing diagnostic delays in acute hepatic porphyria using health records data and machine learning	32
A call for better validation of opioid overdose risk algorithms	32
Transfer-learning on federated observational healthcare data for prediction models using Bayesian sparse logistic regression with informed priors	32
Supporting clinical reasoning through visual summarization and presentation of patient data: a systematic review	31
Digital interdependence: impact of work spillover during clinical team handoffs	31
Performance drift in a mortality prediction algorithm among patients with cancer during the SARS-CoV-2 pandemic	31
Targeted messaging to improve the adoption of clinical decision support for prescription drug monitoring program use	31
Leveraging explainable artificial intelligence to optimize clinical decision support	30
Do patients who read visit notes on the patient portal have a higher rate of “loop closure” on diagnostic tests and referrals in primary care? A retrospective cohort study	30
A span-based model for extracting overlapping PICO entities from randomized controlled trial publications	30
21st Century Cures Act: ethical recommendations for new patient-facing products	30
Real world performance of the 21st Century Cures Act population-level application programming interface	30
Diagnostic accuracy differences in detecting wound maceration between humans and artificial intelligence: the role of human expertise revisited	29
Life events extraction from healthcare notes for veteran acute suicide risk prediction	29
Disparities in seizure outcomes revealed by large language models	29
Toward digital twins in the intensive care unit: a medication management case study	29
PMC-LLaMA: toward building open-source language models for medicine	29
Using electronic health record audit log data for research: insights from early efforts	29
Correction to: De-black-boxing health AI: demonstrating reproducible machine learning computable phenotypes using the N3C-RECOVER Long COVID model in the All of Us data repository	29
Enabling inclusive systematic reviews: incorporating preprint articles with large language model-driven evaluations	28
Perspectives on the role of industry in informatics research and authorship	28
Envisioning the future of primary care: intervention strategies to support patient-centered communication feedback technology	28
Development of a robust corpus for automated evaluation of online health information in Chinese using the DISCERN scale	27
Automated detection of stigmatizing language in Electronic Health Records (EHRs) using a multi-stage transfer learning approach	27
Evaluating the validity of the nursing statements algorithmically generated based on the International Classifications of Nursing Practice for respiratory nursing care using large language models	27
Human-Large Language Model collaboration for systematic ontology updates: a case study in the domain of dietary lifestyle	27
Evidence-based medicine on FHIR augments the standards-based approach to digital health research	27
A novel hyperparameter search approach for accuracy and simplicity in disease prediction risk scoring	26
Derivation and validation of an algorithm for maternal–child linkage in electronic health records	26
Translating evidence into practice: adapting TrialGPT for real-world clinical trial eligibility screening	26
Computational simulation of the potential improvement in clinical outcomes of cardiovascular diseases with the use of a personalized predictive medicine approach	26
LEAP: LLM instruction-example adaptive prompting framework for biomedical relation extraction	26
Electronic health record “gag clauses” and the prevalence of screenshots in peer-reviewed literature	25
Equitable community-based participatory research engagement with communities of color drives All of Us Wisconsin genomic research priorities	25
Dementia and electronic health record phenotypes: a scoping review of available phenotypes and opportunities for future research	25
Predicting treatment retention in medication for opioid use disorder: a machine learning approach using NLP and LLM-derived clinical features	25
Transport-based transfer learning on Electronic Health Records: application to detection of treatment disparities	25
Communicating research findings as a return of value to All of Us Research Program participants: insights from staff at Federally Qualified Health Centers	25
SNOMED CT entity linking challenge	25
VIEWER: an extensible visual analytics framework for enhancing mental healthcare	25
Keeping synthetic patients on track: feedback mechanisms to mitigate performance drift in longitudinal health data simulation	25
Harnessing the potential of large language models in medical education: promise and pitfalls	25
Local large language models for privacy-preserving accelerated review of historic echocardiogram reports	25
Patient attitudes toward ambient artificial intelligence scribes in clinical care: insights from a cross-sectional study	24
Promoting interoperability between SNOMED CT and ICD-11: lessons learned from the pilot project mapping between SNOMED CT and the ICD-11 Foundation	24
Correction to: Deep learning algorithms to detect diabetic kidney disease from retinal photographs in multiethnic populations with diabetes	24
Using event logs to observe interactions with electronic health records: an updated scoping review shows increasing use of vendor-derived measures	24
Current methods for analyzing time-series patient-generated health data to assess treatment response: a scoping review	24
Pivotal trial of a deep-learning-based retinal biomarker (Reti-CVD) in the prediction of cardiovascular disease: data from CMERC-HI	24
Large language models for biomedicine: foundations, opportunities, challenges, and best practices	24
A marker-based neural network system for extracting social determinants of health	24
Enterprise-wide simultaneous deployment of ambient scribe technology: lessons learned from an academic health system	23
Machine learning based prediction of medication adherence in heart failure using large electronic health record cohort with linkages to pharmacy-fill and neighborhood-level data	23
Correction to: In with the old, in with the new: machine learning for time to event biomedical research	23
Machine learning classification of diagnostic accuracy in pathologists interpreting breast biopsies	23
Partnering with patients and families living with chronic conditions to coproduce diagnostic safety through OurDX: a previsit online engagement tool	23
Electronic patient-reported outcome measures for triaging and scheduling outpatient appointments: a systematic review and meta-analysis	23
Leveraging large language models to foster equity in healthcare	23
Prediction of postoperative infections by strategic data imputation and explainable machine learning	23
Utilization patterns and efficiency gains from use of a fully EHR-integrated COVID-19 self-triage and self-scheduling tool: a retrospective analysis	22
Impact of artificial intelligence on pathologists’ decisions: an experiment	22
Large language models accurately identify immunosuppression in intensive care unit patients	22
LCD benchmark: long clinical document benchmark on mortality prediction for language models	22

Development of electronic health record based algorithms to identify individuals with diabetic retinopathy	22
Automatic segmentation of atrial fibrillation and flutter in single-lead electrocardiograms by self-supervised learning and Transformer architecture	22
Predictive performance precision analysis in medicine: identification of low-confidence predictions at patient and profile levels (MED3pa I)	22
The potential and limitations of large language models in identification of the states of motivations for facilitating health behavior change	21
Contextualizing key principles to promote a justice-oriented informatics research agenda: proceedings and reflections from an American Medical Informatics Association workshop	21
Search still matters: information retrieval in the era of generative AI	21
BioInstruct: instruction tuning of large language models for biomedical natural language processing	21
Generating colloquial radiology reports with large language models	21
Integrating human-centered design in public health data dashboards: lessons from the development of a data dashboard of sexually transmitted infections in New York State	21
CPGPrompt: translating clinical guidelines into large language model-executable decision support	21
Leveraging artificial intelligence to summarize abstracts in lay language for increasing research accessibility and transparency	21
Extracting social support and social isolation information from clinical psychiatry notes: comparing a rule-based natural language processing system and a large language model	21
Selective prediction for extracting unstructured clinical data	21
Machine learning-based infection diagnostic and prognostic models in post-acute care settings: a systematic review	21
Markov modeling for cost-effectiveness using federated health data network	21
Comprehension, utility, and preferences of prostate cancer survivors for visual timelines of patient-reported outcomes co-designed for limited graph literacy: meters and emojis over comics	21
Nonexercise machine learning models for maximal oxygen uptake prediction in national population surveys	20
Assessing health literacy and diversity within the All of Us Research Program	20
An exploratory analysis of SNOMED CT national editions	20
Use of calibration to improve the precision of estimates obtained from All of Us data	20
Do electronic health record systems “dumb down” clinicians?	20
Translating and evaluating historic phenotyping algorithms using SNOMED CT	20
“I don’t think it should take you three days to tell me my baby is dead.” A case of fetal demise: unintended consequences of immediate release of information	20
Trading-off privacy and utility: the Washington State experience assessing the performance of a public health digital exposure notification system for coronavirus disease 2019	19
A scoping review of models to identify transgender patients in electronic health records	19
Strengthening the use of artificial intelligence within healthcare delivery organizations: balancing regulatory compliance and patient safety	19
Biomedical blockchain with practical implementations and quantitative evaluations: a systematic review	19
Building a collaborative cloud platform to accelerate heart, lung, blood, and sleep research	19
Combining uncertainty-aware predictive modeling and a bedtimeSmart Snackintervention to prevent nocturnal hypoglycemia in people with type 1 diabetes on multiple daily injections	18
Transforming and evaluating the UK Biobank to the OMOP Common Data Model for COVID-19 research and beyond	18
Evaluation of the impact of defining observable time in real-world data on outcome incidence	18
Dynamic prediction of work status for workers with occupational injuries: assessing the value of longitudinal observations	18
Comparison of six natural language processing approaches to assessing firearm access in Veterans Health Administration electronic health records	18
Methodologies and key considerations for implementing the International Classification of Diseases-11th revision morbidity coding: insights from a national pilot study in China	18
PheMIME: an interactive web app and knowledge base for phenome-wide, multi-institutional multimorbidity analysis	18
Assessing the impact of privacy-preserving record linkage on record overlap and patient demographic and clinical characteristics in PCORnet®, the National Patient-Centered Clinical Research Network	18
Applying anti-racist approaches to informatics: a new lens on traditional frames	18
Hillclimb-Causal Inference: a data-driven approach to identify causal pathways among parental behaviors, genetic risk, and externalizing behaviors in children	17
Visualizing machine learning-based predictions of postpartum depression risk for lay audiences	17
A randomized controlled trial of generic and localized MedlinePlus-based information resources for hard-to-reach urban Hispanic community	17
Safety risks and workflow implications associated with nursing-related free-text communication orders	17
The Potential Implications of Informatics for Value-Based Bare	17
CoRTEx: contrastive learning for representing terms via explanations with applications on constructing biomedical knowledge graphs	17
The impact of the COVID-19 pandemic on daily rhythms	17
Does it save me money? The economic impact of mobile health interventions on medical expenditure of diabetic patients	17
NutriRAG: unleashing the power of large language models for food identification and classification through retrieval methods	17
Exploring approaches to computational representation and classification of user-generated meal logs	17
Community engagement in the development of health-related data visualizations: a scoping review	17
The use of artificial intelligence to optimize medication alerts generated by clinical decision support systems: a scoping review	17
Scanning the medical phenome to identify new diagnoses after recovery from COVID-19 in a US cohort	17
Design of an interface to communicate artificial intelligence-based prognosis for patients with advanced solid tumors: a user-centered approach	17
Implementation and impact of an electronic patient reported outcomes system in a phase II multi-site adaptive platform clinical trial for early-stage breast cancer	17
Deployment of machine learning algorithms to predict sepsis: systematic review and application of the SALIENT clinical AI implementation framework	16
A perspective on individualized treatment effects estimation from time-series health data	16
Ambient artificial intelligence scribes: physician burnout and perspectives on usability and documentation burden	16
Automated deidentification of radiology reports combining transformer and “hide in plain sight” rule-based methods	16
Generating synthetic electronic health record data: a methodological scoping review with benchmarking on phenotype data and open-source software	16
A national survey of digital health company experiences with electronic health record application programming interfaces	16
Establishing and implementing a responsible artificial intelligence framework: a 1-year review	16
Mapping the delineation of practice to the AMIA foundational domains for applied health informatics	16
A novel approach to patient portal activation data to power equity improvements	16
National COVID Cohort Collaborative data enhancements: a path for expanding common data models	16
VACtrac: enhancing access immunization registry data for population outreach using the Bulk Fast Healthcare Interoperable Resource (FHIR) protocol	16
Innovative informatics interventions to improve health and health care	15
Including AI in diffusion-weighted breast MRI has potential to increase reader confidence and reduce workload	15
Retraction and replacement of: Electronic connectivity between hospital pairs: impact on emergency department-related utilization	15
Impact of wearable device data and multi-scale entropy analysis on improving hospital readmission prediction	15
To the editor of JAMIA	15
Beyond the individual	15
A call for the informatics community to define priority practice and research areas at the intersection of climate and health: report from 2023 mini-summit	15
Use of chosen names in electronic health records to promote transgender inclusivity	15
Deep sequential neural network models improve stratification of suicide attempt risk among US veterans	15
A messaging standard for environmental inspections: is it time?	15
Correction to: Dobbs and the future of health data privacy for patients and healthcare organizations	15
FairICP: identifying biases and increasing transparency at the point of care in post-implementation clinical decision support using inductive conformal prediction	15
REDCap and the National Mesothelioma Virtual Bank—a scalable and sustainable model for rare disease biorepositories	15
Information extraction from clinical notes: are we ready to switch to large language models?	15
Post-implementation optimization of medication alerts in hospital computerized provider order entry systems: a scoping review	15
Factors impacting electronic patient-generated data use in safety-net systems: a qualitative study	14
A powerful partnership: researchers and patients working together to develop a patient-facing summary of clinical trial outcome data	14
Guidance for reporting analyses of metadata on electronic health record use	14
Bridging the digital health divide—patient experiences with mobile integrated health and facilitated telehealth by community-level indicators of health disparity	14
Strengths, weaknesses, opportunities, and threats for the nation’s public health information systems infrastructure: synthesis of discussions from the 2022 ACMI Symposium	14
An interactive fitness-for-use data completeness tool to assess activity tracker data	14
Identifying infected patients using semi-supervised and transfer learning	14
The real-world impact of artificial intelligence ethics frameworks across a decade in healthcare: a scoping review	14
Machine learning approaches for electronic health records phenotyping: a methodical review	14
quEHRy: a question answering system to query electronic health records	14
Digital vaccine passports and digital health diplomacy: an online model WHO simulation	14
Toward a unified understanding of drug-drug interactions: mapping Japanese drug codes to RxNorm concepts	14
Social media use and mental health among older adults with multimorbidity: the role of self-care efficacy	14
Enhancing the nation’s public health information infrastructure: a report from the ACMI symposium	14
Evaluating the accuracy of a state-of-the-art large language model for prediction of admissions from the emergency room	14
MedRep: medical concept representations for general electronic health record foundation models	14
“Are we there yet?” Ten persistent hazards and inefficiencies with the use of medication administration technology from the perspective of practicing nurses	14