OOIR: Observatory of International Research

Papers

(The TQCC of Developmental Dynamics is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 500 papers]. The publications cover those that have been published in the past four years, i.e., from 2019-09-01 to 2023-09-01.)

Article	Citations
Making and shaping endochondral and intramembranous bones	59
Regulation of auxin transcriptional responses	45
Neural crest development: insights from the zebrafish	45
Hypermobile Ehlers‐Danlos syndromes: Complex phenotypes, challenging diagnoses, and poorly understood causes	41
The shape of things to come: Topological data analysis and biology, from molecules to organisms	33
Spliceosomopathies and neurocristopathies: Two sides of the same coin?	33
Microglia in the developing retina couple phagocytosis with the progression of apoptosis via P2RY12 signaling	29
Phosphotungstic acid‐enhanced microCT: Optimized protocols for embryonic and early postnatal mice	29
Spliceosomopathies: Diseases and mechanisms	27
TGF‐β superfamily co‐receptors in cancer	25
How faithfully does intramembranous bone regeneration recapitulate embryonic skeletal development?	24
Wound healing across the animal kingdom: Crosstalk between the immune system and the extracellular matrix	24
Developmental origins of mechanical homeostasis in the aorta	22
Probing disrupted neurodevelopment in autism using human stem cell‐derived neurons and organoids: An outlook into future diagnostics and drug development	22
Understanding embryonic development for cell‐based therapies of intervertebral disc degeneration: Toward an effort to treat disc degeneration subphenotypes	21
BMP9 and BMP10: Two close vascular quiescence partners that stand out	21
The various and shared roles of lncRNAs during development	20
Formation of the rete testis during mouse embryonic development	18
A cell‐centric view of lung alveologenesis	17
Coordination of iron homeostasis by bone morphogenetic proteins: Current understanding and unanswered questions	17
Developmental mechanisms driving complex tooth shape in reptiles	16
Morphological diversity of integumentary traits in fowl domestication: Insights from disparity analysis and embryonic development	16
Fascin regulates protrusions and delamination to mediate invasive, collective cell migration in vivo	16
Connection between seminiferous tubules and epididymal duct is originally induced before sex differentiation in a sex‐independent manner	16
Hypoxia inducible factor‐2α importance for migration, proliferation, and self‐renewal of trunk neural crest cells	15

PRPS polymerization influences lens fiber organization in zebrafish	15
Nonlinear gene expression‐phenotype relationships contribute to variation and clefting in the A/WySn mouse	15
Immunity in salamander regeneration: Where are we standing and where are we headed?	15
The acquisition of positional information across the radial axis of the cochlea	14
Postembryonic development and aging of the appendicular skeleton in Ambystoma mexicanum	14
FGF2/EGF contributes to brain neuroepithelial precursor proliferation and neurogenesis in rat embryos: the involvement of embryonic cerebrospinal fluid	14
Bringing tendon biology to heel: Leveraging mechanisms of tendon development, healing, and regeneration to advance therapeutic strategies	14
Fusion of airways during avian lung development constitutes a novel mechanism for the formation of continuous lumena in multicellular epithelia	14
Hydrogen peroxide is necessary during tail regeneration in juvenile axolotl	14
Revisiting the human dental follicle: From tooth development to its association with unerupted or impacted teeth and pathological changes	14
Role of noncanonical Wnt ligands and Ror‐family receptor tyrosine kinases in the development, regeneration, and diseases of the musculoskeletal system	14
Embryo, larval, and juvenile staging of Lytechinus pictus from fertilization through sexual maturation	13
The role of LTBPs in TGF beta signaling	13
Dental and craniofacial defects in the Crtap^−/− mouse model of osteogenesis imperfecta type VII	13
Chemical‐induced craniofacial anomalies caused by disruption of neural crest cell development in a zebrafish model	12
CreLite: An optogenetically controlled Cre/loxP system using red light	12
A developmental staging system and musculoskeletal development sequence of the common musk turtle (Sternotherus odoratus)	11
Multiple epiphyseal dysplasia and related disorders: Molecular genetics, disease mechanisms, and therapeutic avenues	11
Forever young: Linking regeneration and genome size in salamanders	11
Quantifying the tolerance of chick hip joint development to temporary paralysis and the potential for recovery	11
Limb positioning and initiation: An evolutionary context of pattern and formation	11
Extreme evolutionary shifts in developmental timing establish the miniature Danionella as a novel model in the neurosciences	11
Maturation stage enamel defects in Odontogenesis‐associated phosphoprotein (Odaph) deficient mice	11
Endochondral growth zone pattern and activity in the zebrafish pharyngeal skeleton	11
Cell death in the developing vertebrate limb: A locally regulated mechanism contributing to musculoskeletal tissue morphogenesis and differentiation	10
The Sertoli cell expressed gene secernin‐1 (Scrn1) is dispensable for male fertility in the mouse	10
Regulation of zebrafish fin regeneration by vitamin D signaling	10
Eya2 expression during mouse embryonic development revealed by Eya2^lacZ knockin reporter and homozygous mice show mild hearing loss	10
Interplay between morphogen‐directed positional information systems and physiological signaling	10
Distinct toll‐like receptor signaling in the salamander response to tissue damage	10
Closing the gap from transcription to the structural connectome enhances the study of connections in the human brain	10
Dmrt genes participate in the development of Cajal‐Retzius cells derived from the cortical hem in the telencephalon	10
Blastocyst complementation reveals that NKX2‐1 establishes the proximal‐peripheral boundary of the airway epithelium	10
Cranial or postcranial—Dual origin of the pectoral appendage of vertebrates combining the fin‐fold and gill‐arch theories?	10
Envelopment by endothelial cells initiates translocation of avian primordial germ cell into vascular tissue	10
Emerging role of Piezo ion channels in cardiovascular development	9
Dbx2 regulation in limbs suggests interTAD sharing of enhancers	9
BMP signaling and skeletal development in fibrodysplasia ossificans progressiva (FOP)	9
Notch signaling and the emergence of hematopoietic stem cells	9
Zika virus can directly infect and damage the auditory and vestibular components of the embryonic chicken inner ear	9
Assessing evolutionary and developmental transcriptome dynamics in homologous cell types	9
MAFB modulates the maturation of lymphatic vascular networks in mice	9
Phosphosite T674A mutation in kinesin family member 3A fails to reproduce tissue and ciliary defects characteristic of CILK1 loss of function	9
Development of the amniote ventrolateral body wall	9
Transforming growth factor‐beta1 and myeloid‐derived suppressor cells: A cancerous partnership	9
Mammalian hemicentin 1 is assembled into tracks in the extracellular matrix of multiple tissues	9
Annexin A3 is necessary for parallel artery‐vein alignment in the mouse retina	9
Axolotl liver regeneration is accomplished via compensatory congestion mechanisms regulated by ERK signaling after partial hepatectomy	9
Modeling ocular lens disease in Xenopus	9
Tmem2 restricts atrioventricular canal differentiation by regulating degradation of hyaluronic acid	9

Apoptosis and cell proliferation during metamorphosis of the planula larva of Clytia hemisphaerica (Hydrozoa, Cnidaria)	8
Gene and transgenics nomenclature for the laboratory axolotl—Ambystoma mexicanum	8
Lung injury in axolotl salamanders induces an organ‐wide proliferation response	8
From apolar gastrula to polarized larva: Embryonic development of a marine hydroid, Dynamena pumila	8
The many roles of dystroglycan in nervous system development and function	8
The Caenorhabditis elegans proteasome subunit RPN‐12 is required for hermaphrodite germline sex determination and oocyte quality	8
TRPM6 and TRPM7: Novel players in cell intercalation during vertebrate embryonic development	8
Regeneration in anamniotes was replaced by regengrow and scarring in amniotes after land colonization and the evolution of terrestrial biological cycles	8
Advances in tissue engineering of vasculature through three‐dimensional bioprinting	8
Toward whole tissue imaging of axolotl regeneration	8
Heterozygous mutation of the splicing factor Sf3b4 affects development of the axial skeleton and forebrain in mouse	8
Localization of YAP activity in developing skeletal rudiments is responsive to mechanical stimulation	8
Molecular crosstalk in tracheal development and its recurrence in adult tissue regeneration	8
Single‐cell analysis of nonhuman primate preimplantation development in comparison to humans and mice	8
Getting out of an egg: Merging of tooth germs to create an egg tooth in the snake	8
A comparative study of the turnover of multiciliated cells in the mouse trachea, oviduct, and brain	8
Heparan sulfate proteoglycan expression in the regenerating zebrafish fin	8
Embryonic staging of bats with special reference to Vespertilio sinensis and its cochlear development	7
Frizzled 4 regulates ventral blood vessel remodeling in the zebrafish retina	7
The quest for substrates and binding partners: A critical barrier for understanding the role of ADAMTS proteases in musculoskeletal development and disease	7
Aberrantly activated Wnt/β‐catenin pathway co‐receptors LRP5 and LRP6 regulate osteoblast differentiation in the developing coronal sutures of an Apert syndrome (Fgfr2	7
Knockout of the gene encoding the extracellular matrix protein SNED1 results in early neonatal lethality and craniofacial malformations	7
Mouse models of patent ductus arteriosus (PDA) and their relevance for human PDA	7
Tissue‐specific analysis of Fgf18 gene function in palate development	7
Reciprocal interactions between transforming growth factor beta signaling and collagens: Insights from Caenorhabditis elegans	7
Regulation of spatial distribution of BMP ligands for pattern formation	7
Remembering where we are: Positional information in salamander limb regeneration	7
GAL4/GFP enhancer‐trap lines for identification and manipulation of cells and tissues in developing Arabidopsis leaves	7
Development of the lamprey velum and implications for the evolution of the vertebrate jaw	7
Interferon regulatory factor 6 is required for proper wound healing in vivo	7
Regulation of vertebrate forelimb development and wing reduction in the flightless emu	7
Comparative assessment of Fgf's diverse roles in inner ear development: A zebrafish perspective	6
Tgf‐β superfamily and limb regeneration: Tgf‐β to start and Bmp to end	6
Structure and evolution of neuronal wiring receptors and ligands	6
Emerging roles of MT‐MMPs in embryonic development	6
miR‐199 family contributes to regulation of sonic hedgehog expression during craniofacial development	6
Positional Information—A concept underpinning our understanding of developmental biology	6
Fate‐mapping analysis usingRorb‐IRES‐Crereveals apical‐to‐basal gradient ofRorbexpression in mouse cochlea	6
The development of the trunk neural crest in the turtleTrachemys scripta	6
Time‐sequenced transcriptomes of developing distal mouse limb buds: A comparative tissue layer analysis	6
Zebrafish etv2 knock‐in line labels vascular endothelial and blood progenitor cells	6
A distal enhancer that directsOtx2expression in the retinal pigment epithelium and neuroretina	6
An interdisciplinary approach to investigate collective cell migration in neural crest	6
Notch and Bmp signaling pathways act coordinately during the formation of the proepicardium	6
Salamander‐Eci: An optical clearing protocol for the three‐dimensional exploration of regeneration	6
Pax9's dual roles in modulating Wnt signaling during murine palatogenesis	6
Retinol binding protein 1 affects Xenopus anterior neural development via all‐trans retinoic acid signaling	6
Fate‐mapping analysis of cochlear cells expressing Atoh1mRNA via a new Atoh1^{3*HA‐P2A‐Cre} knockin mouse strain	6
Kv2.1 voltage‐gated potassium channels in developmental perspective	6
Two different sources of Perlecan cooperate for its function in the basement membrane of the Drosophila wing imaginal disc	6
Lineage tracing of cells expressing the ciliary gene IFT140 during bone development	6
Transforming growth factor beta signaling: The master sculptor of fingers	6
Repeated ecological and life cycle transitions make salamanders an ideal model for evolution and development	6
Genetic disruption of zebrafish mab21l1 reveals a conserved role in eye development and affected pathways	6
Development of the anterior lateral line system through local tissue‐tissue interactions in the zebrafish head	6
Zebrafish heart regenerates after chemoptogenetic cardiomyocyte depletion	6
Cryo‐injury procedure‐induced cardiac regeneration shows unique gene expression profiles in the newt Pleurodeles waltl	6
Tissue‐specific expression of ribosomal protein paralogue eRpL22‐like in Drosophila melanogaster eye development	5
Uncovering the secreted signals and transcription factors regulating the development of mammalian middle ear ossicles	5
Loss of Grhl3 is correlated with altered cellular protrusions in the non‐neural ectoderm during neural tube closure	5
Deletion of Fibroblast growth factor 9 globally and in skeletal muscle results in enlarged tuberosities at sites of deltoid tendon attachments	5
Genetic compensation between Pax3 and Pax7 in zebrafish appendicular muscle formation	5
The long and the short of tails	5
A CRISPR/Cas9 zebrafish lamin A/C mutant model of muscular laminopathy	5
Distinct regulatory states control the elongation of individual skeletal rods in the sea urchin embryo	5
Lessons from joint development for cartilage repair in the clinic	5
Microtubules provide guidance cues for myofibril and sarcomere assembly and growth	5
Systematic expression analysis of plasticity‐related genes in mouse brain development brings PRG4 into play	5
Three‐dimensional analysis of mesonephric tubules remodeling into efferent tubules in the male mouse embryo	5
The requirement of SUMO2/3 for SENP2 mediated extraembryonic and embryonic development	5
Knockdown of slit signaling during limb development leads to a reduction in humerus length	5
Epithelial morphogenesis in the perinatal mouse uterus	5
In ovo electroporation of chicken limb bud ectoderm	5
Cfdp1 controls the cell cycle and neural differentiation in the zebrafish cerebellum and retina	5
Inhibition ofmmp13aduring zebrafish fin regeneration disrupts fin growth, osteoblasts differentiation, and Laminin organization	5
A nontoxic fungal natural product modulates fin regeneration in zebrafish larvae upstream of FGF‐WNT developmental signaling	5
Generation of no‐yellow‐pigment Xenopus tropicalis by slc2a7 gene knockout	5
FGF20‐FGFR1 signaling through MAPK and PI3K controls sensory progenitor differentiation in the organ of Corti	5
Parallel evolution of direct development in frogs ‐ Skin and thyroid gland development in African Squeaker Frogs (Anura: Arthroleptidae: Arthroleptis)	5
Zebrafish Galectin 3 binding protein is the target antigen of the microglial 4C4 monoclonal antibody	5