OOIR: Observatory of International Research

Papers

(The TQCC of Developmental Dynamics is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-07-01 to 2024-07-01.)

Article	Citations
Making and shaping endochondral and intramembranous bones	85
Hypermobile Ehlers‐Danlos syndromes: Complex phenotypes, challenging diagnoses, and poorly understood causes	66
TGF‐β superfamily co‐receptors in cancer	38
BMP9 and BMP10: Two close vascular quiescence partners that stand out	34
Developmental origins of mechanical homeostasis in the aorta	32
A cell‐centric view of lung alveologenesis	29
How faithfully does intramembranous bone regeneration recapitulate embryonic skeletal development?	27
The role of LTBPs in TGF beta signaling	25
Understanding embryonic development for cell‐based therapies of intervertebral disc degeneration: Toward an effort to treat disc degeneration subphenotypes	23
Coordination of iron homeostasis by bone morphogenetic proteins: Current understanding and unanswered questions	23
Formation of the rete testis during mouse embryonic development	22
Revisiting the human dental follicle: From tooth development to its association with unerupted or impacted teeth and pathological changes	21
Immunity in salamander regeneration: Where are we standing and where are we headed?	21
Bringing tendon biology to heel: Leveraging mechanisms of tendon development, healing, and regeneration to advance therapeutic strategies	20
Fusion of airways during avian lung development constitutes a novel mechanism for the formation of continuous lumena in multicellular epithelia	19
Hydrogen peroxide is necessary during tail regeneration in juvenile axolotl	18
Multiple epiphyseal dysplasia and related disorders: Molecular genetics, disease mechanisms, and therapeutic avenues	17
Advances in tissue engineering of vasculature through three‐dimensional bioprinting	17
The many roles of dystroglycan in nervous system development and function	17
Postembryonic development and aging of the appendicular skeleton in Ambystoma mexicanum	17
Embryo, larval, and juvenile staging of Lytechinus pictus from fertilization through sexual maturation	17
Limb positioning and initiation: An evolutionary context of pattern and formation	17
Hypoxia inducible factor‐2α importance for migration, proliferation, and self‐renewal of trunk neural crest cells	17
Axolotl liver regeneration is accomplished via compensatory congestion mechanisms regulated by ERK signaling after partial hepatectomy	16
BMP signaling and skeletal development in fibrodysplasia ossificans progressiva (FOP)	16

Assessing evolutionary and developmental transcriptome dynamics in homologous cell types	16
Apoptosis and cell proliferation during metamorphosis of the planula larva of Clytia hemisphaerica (Hydrozoa, Cnidaria)	15
Extreme evolutionary shifts in developmental timing establish the miniature Danionella as a novel model in the neurosciences	15
Distinct toll‐like receptor signaling in the salamander response to tissue damage	14
Emerging role of Piezo ion channels in cardiovascular development	14
Eya2 expression during mouse embryonic development revealed by Eya2^lacZ knockin reporter and homozygous mice show mild hearing loss	14
Transforming growth factor‐beta1 and myeloid‐derived suppressor cells: A cancerous partnership	14
Quantifying the tolerance of chick hip joint development to temporary paralysis and the potential for recovery	14
Fate‐mapping analysis of cochlear cells expressing Atoh1mRNA via a new Atoh1^{3*HA‐P2A‐Cre} knockin mouse strain	14
Structure and evolution of neuronal wiring receptors and ligands	13
Forever young: Linking regeneration and genome size in salamanders	13
Closing the gap from transcription to the structural connectome enhances the study of connections in the human brain	13
The Sertoli cell expressed gene secernin‐1 (Scrn1) is dispensable for male fertility in the mouse	13
Zebrafish Galectin 3 binding protein is the target antigen of the microglial 4C4 monoclonal antibody	13
CreLite: An optogenetically controlled Cre/loxP system using red light	13
Envelopment by endothelial cells initiates translocation of avian primordial germ cell into vascular tissue	13
Dbx2 regulation in limbs suggests interTAD sharing of enhancers	12
Maturation stage enamel defects in Odontogenesis‐associated phosphoprotein (Odaph) deficient mice	12
Regeneration in anamniotes was replaced by regengrow and scarring in amniotes after land colonization and the evolution of terrestrial biological cycles	12
Distinct regulatory states control the elongation of individual skeletal rods in the sea urchin embryo	12
A developmental staging system and musculoskeletal development sequence of the common musk turtle (Sternotherus odoratus)	12
Blastocyst complementation reveals that NKX2‐1 establishes the proximal‐peripheral boundary of the airway epithelium	12
Repeated ecological and life cycle transitions make salamanders an ideal model for evolution and development	12
Toward whole tissue imaging of axolotl regeneration	12
Comparative assessment of Fgf's diverse roles in inner ear development: A zebrafish perspective	12
Notch signaling and the emergence of hematopoietic stem cells	12
Endochondral growth zone pattern and activity in the zebrafish pharyngeal skeleton	12
Cell death in the developing vertebrate limb: A locally regulated mechanism contributing to musculoskeletal tissue morphogenesis and differentiation	11
Knockout of the gene encoding the extracellular matrix protein SNED1 results in early neonatal lethality and craniofacial malformations	11
Phosphosite T674A mutation in kinesin family member 3A fails to reproduce tissue and ciliary defects characteristic of CILK1 loss of function	11
From apolar gastrula to polarized larva: Embryonic development of a marine hydroid, Dynamena pumila	11
Gene and transgenics nomenclature for the laboratory axolotl—Ambystoma mexicanum	11
Emerging roles of MT‐MMPs in embryonic development	11
Pax9's dual roles in modulating Wnt signaling during murine palatogenesis	11
Identification of chromatin states during zebrafish gastrulation using CUT&RUN and CUT&Tag	10
Embryonic development of the camouflaging dwarf cuttlefish, Sepia bandensis	10
Molecular crosstalk in tracheal development and its recurrence in adult tissue regeneration	10
Regulation of zebrafish fin regeneration by vitamin D signaling	10
Lung injury in axolotl salamanders induces an organ‐wide proliferation response	10
MAFB modulates the maturation of lymphatic vascular networks in mice	9
Rbbp4 loss disrupts neural progenitor cell cycle regulation independent of Rb and leads to Tp53 acetylation and apoptosis	9
miR‐199 family contributes to regulation of sonic hedgehog expression during craniofacial development	9
Tgf‐β superfamily and limb regeneration: Tgf‐β to start and Bmp to end	9
Single‐cell analysis of nonhuman primate preimplantation development in comparison to humans and mice	9
Aberrantly activated Wnt/β‐catenin pathway co‐receptors LRP5 and LRP6 regulate osteoblast differentiation in the developing coronal sutures of an Apert syndrome (Fgfr2	9
Zebrafish heart regenerates after chemoptogenetic cardiomyocyte depletion	9
Reciprocal interactions between transforming growth factor beta signaling and collagens: Insights from Caenorhabditis elegans	9
Regulation of spatial distribution of BMP ligands for pattern formation	9
Regulation of vertebrate forelimb development and wing reduction in the flightless emu	9
Heparan sulfate proteoglycan expression in the regenerating zebrafish fin	9

Development of the lamprey velum and implications for the evolution of the vertebrate jaw	9
Two different sources of Perlecan cooperate for its function in the basement membrane of the Drosophila wing imaginal disc	8
The Caenorhabditis elegans proteasome subunit RPN‐12 is required for hermaphrodite germline sex determination and oocyte quality	8
Mouse models of patent ductus arteriosus (PDA) and their relevance for human PDA	8
Retinol binding protein 1 affects Xenopus anterior neural development via all‐trans retinoic acid signaling	8
Tissue‐specific analysis of Fgf18 gene function in palate development	8
The quest for substrates and binding partners: A critical barrier for understanding the role of ADAMTS proteases in musculoskeletal development and disease	8
Transforming growth factor beta signaling: The master sculptor of fingers	8
Embryonic staging of bats with special reference to Vespertilio sinensis and its cochlear development	8
Development of the anterior lateral line system through local tissue‐tissue interactions in the zebrafish head	8
Ras/MAPK dysregulation in development causes a skeletal myopathy in an activating Braf^L597V mouse model for cardio‐facio‐cutaneous syndrome	8
Lineage tracing of cells expressing the ciliary gene IFT140 during bone development	8
Genetic compensation between Pax3 and Pax7 in zebrafish appendicular muscle formation	8
The Drosophila E78 nuclear receptor regulates dietary triglyceride uptake and systemic lipid levels	8
Epithelial morphogenesis in the perinatal mouse uterus	8
Three‐dimensional analysis of mesonephric tubules remodeling into efferent tubules in the male mouse embryo	7
Ocular elongation and retraction in foveated reptiles	7
Salamander‐Eci: An optical clearing protocol for the three‐dimensional exploration of regeneration	7
Time‐sequenced transcriptomes of developing distal mouse limb buds: A comparative tissue layer analysis	7
Systematic expression analysis of plasticity‐related genes in mouse brain development brings PRG4 into play	7
The role of Hippo‐YAP/TAZ signaling in brain development	7
Coordinated patterning of zebrafish caudal fin symmetry by a central and two peripheral organizers	7
Genetic disruption of zebrafish mab21l1 reveals a conserved role in eye development and affected pathways	7
Uncovering the secreted signals and transcription factors regulating the development of mammalian middle ear ossicles	7
Deletion of Fibroblast growth factor 9 globally and in skeletal muscle results in enlarged tuberosities at sites of deltoid tendon attachments	7
Generation of no‐yellow‐pigment Xenopus tropicalis by slc2a7 gene knockout	7
A CRISPR/Cas9 zebrafish lamin A/C mutant model of muscular laminopathy	7
Heterogeneity and genomic loci of ubiquitous transgenic Cre reporter lines in zebrafish	7
Effects of extended pharmacological disruption of zebrafish embryonic heart biomechanical environment on cardiac function, morphology, and gene expression	7
GDE2 expression in oligodendroglia regulates the pace of oligodendrocyte maturation	6
The microRNA miR‐33 is a pleiotropic regulator of metabolic and developmental processes in Drosophila melanogaster	6
Microtubules provide guidance cues for myofibril and sarcomere assembly and growth	6
Limb reduction in squamate reptiles correlates with the reduction of the chondrocranium: A case study on serpentiform anguids	6
Notch and Bmp signaling pathways act coordinately during the formation of the proepicardium	6
Fgf8 dosage regulates jaw shape and symmetry through pharyngeal‐cardiac tissue relationships	6
The use of transgenics in the laboratory axolotl	6
Cfdp1 controls the cell cycle and neural differentiation in the zebrafish cerebellum and retina	6
The real Nemo movie: Description of embryonic development inAmphiprion ocellarisfrom first division to hatching	6
Evolution of inwardly rectifying potassium channels and their gene expression in zebrafish embryos	6
Disruption of Trip11 in cranial neural crest cells is associated with increased ER and Golgi stress contributing to skull defects in mice	6
Loss of Grhl3 is correlated with altered cellular protrusions in the non‐neural ectoderm during neural tube closure	6
A comparative analysis of the ontogeny of syngnathids (pipefishes and seahorses) reveals how heterochrony contributed to their diversification	6
Knockdown of slit signaling during limb development leads to a reduction in humerus length	6
The role of Gdf5 in the development of the zebrafish fin endoskeleton	6
Cryo‐injury procedure‐induced cardiac regeneration shows unique gene expression profiles in the newt Pleurodeles waltl	6
Transcriptome analysis of the epididymis from Plag1 deficient mice suggests dysregulation of sperm maturation and extracellular matrix genes	6
DNA repair during regeneration in Ambystoma mexicanum	6
A nontoxic fungal natural product modulates fin regeneration in zebrafish larvae upstream of FGF‐WNT developmental signaling	6
BMP/TGF‐β signaling as a modulator of neurodegeneration in ALS	6
Parallel evolution of direct development in frogs ‐ Skin and thyroid gland development in African Squeaker Frogs (Anura: Arthroleptidae: Arthroleptis)	6
The long and the short of tails	6
Analysis of FGF20‐regulated genes in organ of Corti progenitors by translating ribosome affinity purification	6
FGF20‐FGFR1 signaling through MAPK and PI3K controls sensory progenitor differentiation in the organ of Corti	5
In ovo electroporation of chicken limb bud ectoderm	5
DZIP1 regulates mammalian cardiac valve development through a Cby1‐β‐catenin mechanism	5
Tissue‐specific expression of ribosomal protein paralogue eRpL22‐like in Drosophila melanogaster eye development	5
TheTale‐TellHeart: Evolutionary tetrapod shift from aquatic to terrestrial life‐style reflected in heart changes in axolotl (Ambystoma mexicanum)	5
Axolotl: A resourceful vertebrate model for regeneration and beyond	5
A temporally resolved transcriptome for developing “Keller” explants of the Xenopus laevis dorsal marginal zone	5
Spatiotemporal imaging and analysis of mouse and human liver bud morphogenesis	5
Cross‐talk between EGFR and BMP signals regulates chondrocyte maturation during endochondral ossification	5
Recent insights into gap junction biogenesis in the cochlea	5
Heparan sulfate fine‐tunes stromal‐epithelial communication in the prostate gland	5
Rethinking positional information and digit identity: The role of late interdigit signaling	5
Atavisms in the avian hindlimb and early developmental polarity of the limb	5
Cardiomyocyte maturation and its reversal during cardiac regeneration	5
An emerging class of new therapeutics targeting TGF, Activin, and BMP ligands in pulmonary arterial hypertension	5
Lessons from joint development for cartilage repair in the clinic	5
The role of the protein tyrosine phosphatase SHP2 in ossification	5
The dynamic spatial and temporal relationships between the phalanx‐forming region and the interdigits determine digit identity in the chick limb autopod	5
Single cell sequencing of the mouse anterior palate reveals mesenchymal heterogeneity	5