Molecular Phylogenetics and Evolution

Article	Citations
An enhanced target-enrichment bait set for Hexacorallia provides phylogenomic resolution of the staghorn corals (Acroporidae) and close relatives	74
Phylogenomics of Gesneriaceae using targeted capture of nuclear genes	54
Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture	51
Backbone phylogeny and evolution of Apioideae (Apiaceae): New insights from phylogenomic analyses of plastome data	51
Phylogeny and classification of Odonata using targeted genomics	50
New multilocus phylogeny reorganises the family Macrobiotidae (Eutardigrada) and unveils complex morphological evolution of the Macrobiotus hufelandi group	47
New insights into the phylogeny and evolution of lady beetles (Coleoptera: Coccinellidae) by extensive sampling of genes and species	46
Molecular phylogeny, historical biogeography and revised classification of andrenine bees (Hymenoptera: Andrenidae)	46
Utility of targeted sequence capture for phylogenomics in rapid, recent angiosperm radiations: Neotropical Burmeistera bellflowers as a case study	39
A phylogenomic approach resolves the backbone of Prunus (Rosaceae) and identifies signals of hybridization and allopolyploidy	39
Ripe for reassessment: A synthesis of available molecular data for the speciose diatom family Bacillariaceae	37
Phylogenomic relationships and character evolution of the grape family (Vitaceae)	37
A novel reference dated phylogeny for the genus Spodoptera Guenée (Lepidoptera: Noctuidae: Noctuinae): new insights into the evolution of a pest-rich genus	36
Out of the Himalaya-Hengduan Mountains: Phylogenomics, biogeography and diversification of Polygonatum Mill. (Asparagaceae) in the Northern Hemisphere	35
A genomic perspective on an old question: Salmo trouts or Salmo trutta (Teleostei: Salmonidae)?	35
A phylogenomic supermatrix of Galliformes (Landfowl) reveals biased branch lengths	34
Phylogenomic analyses based on genome-skimming data reveal cyto-nuclear discordance in the evolutionary history of Cotoneaster (Rosaceae)	32
Resolving phylogeny and polyploid parentage using genus-wide genome-wide sequence data from birch trees	32
Phylogenomics and biogeography of Catalpa (Bignoniaceae) reveal incomplete lineage sorting and three dispersal events	32
Phylogenomics of Ichneumonoidea (Hymenoptera) and implications for evolution of mode of parasitism and viral endogenization	32
Combining genomic, phenotypic and Sanger sequencing data to elucidate the phylogeny of the two-clawed spiders (Dionycha)	32
Phylogenomic framework of the IRLC legumes (Leguminosae subfamily Papilionoideae) and intercontinental biogeography of tribe Wisterieae	31
Extensive cryptic diversity in the widely distributed Polysiphonia scopulorum (Rhodomelaceae, Rhodophyta): Molecular species delimitation and morphometric analyses	30
Phylogenomic analyses recover a clade of large-bodied decapodiform cephalopods	30
Comprehensive taxon sampling and vetted fossils help clarify the time tree of shorebirds (Aves, Charadriiformes)	30

Collapsing dubiously resolved gene-tree branches in phylogenomic coalescent analyses	30
Phylogenomics of braconid wasps (Hymenoptera, Braconidae) sheds light on classification and the evolution of parasitoid life history traits	29
Plastomes from tribe Plantagineae (Plantaginaceae) reveal infrageneric structural synapormorphies and localized hypermutation for Plantago and functional loss of ndh genes from Littorella	28
Phylotranscriptomic evidence for pervasive ancient hybridization among Old World salamanders	28
Phylogenetics and comparative plastome genomics of two of the largest genera of angiosperms, Piper and Peperomia (Piperaceae)	28
Chloroplast phylogenomics and character evolution of eastern Asian Astragalus (Leguminosae): Tackling the phylogenetic structure of the largest genus of flowering plants in Asia	27
How mitonuclear discordance and geographic variation have confounded species boundaries in a widely studied snake	26
Phylogenomics, divergence time estimation and trait evolution provide a new look into the Gracilariales (Rhodophyta)	24
Phylogenomics of manakins (Aves: Pipridae) using alternative locus filtering strategies based on informativeness	24
Large-scale phylogenomic analysis provides new insights into the phylogeny of the class Oligohymenophorea (Protista, Ciliophora) with establishment of a new subclass Urocentria nov. subcl	24
Tempo and mode of evolution of oryzomyine rodents (Rodentia, Cricetidae, Sigmodontinae): A phylogenomic approach	24
Frog phylogeny: A time-calibrated, species-level tree based on hundreds of loci and 5,242 species	24
Sequential colonization of oceanic archipelagos led to a species-level radiation in the common chaffinch complex (Aves: Fringilla coelebs)	23
Revealing new sponge-associated cyanobacterial diversity: Novel genera and species	23
Phylogenomic inference of species and subspecies diversity in the Palearctic salamander genus Salamandra	22
Phylogeny and time scale of diversification in the fossil-rich sunfishes and black basses (Teleostei: Percomorpha: Centrarchidae)	21
Reconstruction of the evolutionary biogeography reveal the origins and diversification of oysters (Bivalvia: Ostreidae)	21
Diversity, biogeography, evolutionary relationships, and conservation of Eastern Mediterranean freshwater mussels (Bivalvia: Unionidae)	21
Shining a light on species delimitation in the tree genus Engelhardia Leschenault ex Blume (Juglandaceae)	21
A 313 plastome phylogenomic analysis of Pooideae: Exploring relationships among the largest subfamily of grasses	21
Evolutionary history of inversions in directional mutational pressures in crustacean mitochondrial genomes: Implications for evolutionary studies	21
Mitochondrial evolution in the Demospongiae (Porifera): Phylogeny, divergence time, and genome biology	20
A taxonomist‘s nightmare – Cryptic diversity in Caribbean intertidal arthropods (Arachnida, Acari, Oribatida)	20
Molecular phylogeny, classification, biogeography and diversification patterns of a diverse group of moths (Geometridae: Boarmiini)	20
Systematics and geographical distribution of Galba species, a group of cryptic and worldwide freshwater snails	20
Divergent evolution profiles of DD37D and DD39D families of Tc1/mariner transposons in eukaryotes	20
A phylogeny for the Drosophila montium species group: A model clade for comparative analyses	20
Phylomitogenomics provides new perspectives on the Euphasmatodea radiation (Insecta: Phasmatodea)	20
Phylotranscriptomics reveals the complex evolutionary and biogeographic history of the genus Tsuga with an East Asian-North American disjunct distribution	20
Phylogenomic analyses of mud dragons (Kinorhyncha)	20
A polyvalent and universal tool for genomic studies in gastropod molluscs (Heterobranchia)	20
Phylogenomics of the aquatic plant genus Ottelia (Hydrocharitaceae): Implications for historical biogeography	19
Poor performance of DNA barcoding and the impact of RAD loci filtering on the species delimitation of an Iberian ant-eating spider	19
Nuclear phylogenomics, but not mitogenomics, resolves the most successful Late Miocene radiation of African mammals (Rodentia: Muridae: Arvicanthini)	19
The biogeography of Dromiciops in southern South America: Middle Miocene transgressions, speciation and associations with Nothofagus	19
Another blow to the conserved gene order in Annelida: Evidence from mitochondrial genomes of the calcareous tubeworm genus Hydroides	19
Unique environmental Symbiodiniaceae diversity at an isolated island in the northwestern Pacific	19
Quaternary climatic fluctuations influence the demographic history of two species of sky-island endemic amphibians in the Neotropics	19
The interplay between host biogeography and phylogeny in structuring diversification of the feather louse genus Penenirmus	19
Molecular phylogeny of Thoracotremata crabs (Decapoda, Brachyura): Toward adopting monophyletic superfamilies, invasion history into terrestrial habitats and multiple origins of symbiosis	19
Phylogenomics of African radiation of Praomyini (Muridae: Murinae) rodents: First fully resolved phylogeny, evolutionary history and delimitation of extant genera	19
Re-evaluating and dating myriapod diversification with phylotranscriptomics under a regime of dense taxon sampling	19
Plastome structure, evolution, and phylogeny of Selaginella	19
Phylogenetics of mud snakes (Squamata: Serpentes: Homalopsidae): A paradox of both undescribed diversity and taxonomic inflation	18
Genome-wide RAD sequencing resolves the evolutionary history of serrate leaf Juniperus and reveals discordance with chloroplast phylogeny	18
Genomic fingerprints of palaeogeographic history: The tempo and mode of rift tectonics across tropical Africa has shaped the diversification of the killifish genus Nothobranchius (Teleostei: Cyprinodo	18
Gene-tree misrooting drives conflicts in phylogenomic coalescent analyses of palaeognath birds	18
Plastid phylogenomics improves resolution of phylogenetic relationship in the Cheirostylis and Goodyera clades of Goodyerinae (Orchidoideae, Orchidaceae)	18
Molecular Phylogeny of Cryptonanus (Didelphidae: Thylamyini): Evidence for a recent and complex diversification in South American open biomes	18
A comprehensive phylogeny helps clarify the evolutionary history of host breadth and lure response in the Australian Dacini fruit flies (Diptera: Tephritidae)	18

Multigene phylogenetics of euglenids based on single-cell transcriptomics of diverse phagotrophs	18
Molecular systematics and biogeographic history of the African climbing-mouse complex (Dendromus)	18
An ancient, Antarctic-specific species complex: large divergences between multiple Antarctic lineages of the tardigrade genus Mesobiotus	18
Comparative phylogeographic and demographic analyses reveal a congruent pattern of sister relationships between bird populations of the northern and south-central Atlantic Forest	17
Evolution of protective symbiosis in palaemonid shrimps (Decapoda: Caridea) with emphases on host spectrum and morphological adaptations	17
Fossil-calibrated time tree of Podarcis wall lizards provides limited support for biogeographic calibration models	17
Homoploid hybrids, allopolyploids, and high ploidy levels characterize the evolutionary history of a western North American quillwort (Isoëtes) complex	17
Plastome-based phylogenomics elucidate relationships in rare Isoëtes species groups from the Neotropics	17
New genetic markers for Sapotaceae phylogenomics: More than 600 nuclear genes applicable from family to population levels	17
Contrasting biogeographical patterns in Margarella (Gastropoda: Calliostomatidae: Margarellinae) across the Antarctic Polar Front	17
Deciphering reticulate evolution of the largest group of polyploid vertebrates, the subfamily cyprininae (Teleostei: Cypriniformes)	17
Phylogenetic relationships and the evolution of host preferences in the largest clade of brood parasitic bees (Apidae: Nomadinae)	17
Phylogenomics of Porites from the Arabian Peninsula	17
Phylogeny and evolution of mycophagy in the Zygothrica genus group (Diptera: Drosophilidae)	17
Phylogeography of Mytilisepta virgata (Mytilidae: Bivalvia) in the northwestern Pacific: Cryptic mitochondrial lineages and mito-nuclear discordance	17
Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida)	17
Phylotranscriptomics reveals the evolutionary history of subtropical East Asian white pines: further insights into gymnosperm diversification	17
Cryptic host-driven speciation of mobilid ciliates epibiotic on freshwater planarians	16
Molecular phylogenetics of Lotus (Leguminosae) with emphasis in the tempo and patterns of colonization in the Macaronesian region	16
Multiple species delimitation approaches applied to the avian lark genus Alaudala	16
New taxonomic and evolutionary insights relevant to the cat flea, Ctenocephalides felis: A geographic perspective	16
Evolutionary considerations of the oligosaccharyltransferase AglB and other aspects of N-glycosylation across Archaea	16
Trait-dependent dispersal in rails (Aves: Rallidae): Historical biogeography of a cosmopolitan bird clade	16
Comprehensive phylogeny of Myrmecocystus honey ants highlights cryptic diversity and infers evolution during aridification of the American Southwest	16
Phylogenomics of the Neotropical fish family Serrasalmidae with a novel intrafamilial classification (Teleostei: Characiformes)	16
Evolutionary history of Hemerocallis in Japan inferred from chloroplast and nuclear phylogenies and levels of interspecific gene flow	16
Historical biogeography of Pomaderris (Rhamnaceae): Continental vicariance in Australia and repeated independent dispersals to New Zealand	16
One-way ticket to the blue: A large-scale, dated phylogeny revealed asymmetric land-to-water transitions in acariform mites (Acari: Acariformes)	16
Phylogenetics and the evolution of terrestriality in mudskippers (Gobiidae: Oxudercinae)	16
The phylogenetic relationship within SARS-CoV-2s: An expanding basal clade	16
How challenging RADseq data turned out to favor coalescent-based species tree inference. A case study in Aichryson (Crassulaceae)	16
A RADseq phylogeny of Barleria (Acanthaceae) resolves fine-scale relationships	15
Phylogenetic relationships of the Boana pulchella Group (Anura: Hylidae)	15
Unravelling unknown cyanobacteria diversity linked with HCN production	15
The evolutionary history of an accidental model organism, the leopard gecko Eublepharis macularius (Squamata: Eublepharidae)	15
Eight new mitogenomes clarify the phylogenetic relationships of Stromboidea within the caenogastropod phylogenetic framework	15
A molecular phylogeny of forktail damselflies (genus Ischnura) reveals a dynamic macroevolutionary history of female colour polymorphisms	15
Untangling filamentous marine cyanobacterial diversity from the coast of South Florida with the description of Vermifilaceae fam. nov. and three new genera: Leptochromothrix gen. nov., Ophiophycus gen	15
Repeated intercontinental migrations and recurring hybridizations characterise the evolutionary history of yew (Taxus L.)	15
Deconstructing Difflugia: The tangled evolution of lobose testate amoebae shells (Amoebozoa: Arcellinida) illustrates the importance of convergent evolution in protist phylogeny	15
Comparison of sequence-capture and ddRAD approaches in resolving species and populations in hexacorallian anthozoans	15
Parallel decay of vision genes in subterranean water beetles	15
Phylogenomics of the Mesoamerican alligator-lizard genera Abronia and Mesaspis (Anguidae: Gerrhonotinae) reveals multiple independent clades of arboreal and terrestrial species	15
Comparative mitogenomics and phylogenetics of the stinging wasps (Hymenoptera: Aculeata)	15
Molecular phylogeny and species delimitation of the genus Schizodon (Characiformes, Anostomidae)	15
Global dispersal and diversification in ground beetles of the subfamily Carabinae	15
New species boundaries and the diversification history of marsh rat taxa clarify historical connections among ecologically and geographically distinct wetlands of South America	14
Revisiting the phylogeny of the genus Lolliguncula Steenstrup 1881 improves understanding of their biogeography and proves the validity of Lolliguncula argus Brakoniecki & Roper, 1985	14
Using ultraconserved elements to reconstruct the termite tree of life	14
Discordant evolution of organellar genomes in peas (Pisum L.)	14
Transcriptomic data reveals nuclear-mitochondrial discordance in Gomphocerinae grasshoppers (Insecta: Orthoptera: Acrididae)	14
Expanding Acutuncus: Phylogenetics and morphological analyses reveal a considerably wider distribution for this tardigrade genus	14
Deciphering phylogenetic relationships in class Karyorelictea (Protista, Ciliophora) based on updated multi-gene information with establishment of a new order Wilbertomorphida n. ord.	14
First worldwide molecular phylogeny of the morphologically and ecologically hyperdiversified snapping shrimp genus Alpheus (Malacostraca: Decapoda)	14
A multi-gene phylogenetic analysis of the leafhopper subfamily Typhlocybinae (Hemiptera: Cicadellidae) challenges the traditional view of the evolution of wing venation	14
Ancestral sequence reconstruction of ancient lipase from family I.3 bacterial lipolytic enzymes	14
A broadly resolved molecular phylogeny of New Zealand cheilostome bryozoans as a framework for hypotheses of morphological evolution	14
A comprehensive molecular phylogeny of the brachyuran crab superfamily Xanthoidea provides novel insights into its systematics and evolutionary history	14
Diversity, biogeography, and reproductive evolution in the genus Pipa (Amphibia: Anura: Pipidae)	14
Caryophylliids (Anthozoa, Scleractinia) and mitochondrial gene order: Insights from mitochondrial and nuclear phylogenomics	14
Adaptive radiation and speciation in Rhipicephalus ticks: A medley of novel hosts, nested predator-prey food webs, off-host periods and dispersal along temperature variation gradients	14
Molecular evolutionary analyses of tooth genes support sequential loss of enamel and teeth in baleen whales (Mysticeti)	14
Mesozoic origin of coleoid cephalopods and their abrupt shifts of diversification patterns	14
Historical specimens and the limits of subspecies phylogenomics in the New World quails (Odontophoridae)	14
Opening a door to the spatiotemporal history of plants from the tropical Indochina Peninsula to subtropical China	14
The number of species of degus (genus Octodon) is currently underestimated: An appraisal of species limits and their phylogenetic relationships (Rodentia: Hystricomorpha: Octodontidae)	13
Rates and patterns of molecular evolution in bryophyte genomes, with focus on complex thalloid liverworts, Marchantiopsida	13
New insights into the phylogeny and evolution of Podocarpaceae inferred from transcriptomic data	13
Genome skimming elucidates the evolutionary history of Octopoda	13
Genomic phylogeography of the White-crowned Manakin Pseudopipra pipra (Aves: Pipridae) illuminates a continental-scale radiation out of the Andes	13
Large-scale phylogenomics of the genus Macrostomum (Platyhelminthes) reveals cryptic diversity and novel sexual traits	13
A hybrid-capture approach to reconstruct the phylogeny of Scleractinia (Cnidaria: Hexacorallia)	13
Phylogeny and biogeography of Myrcia sect. Aguava (Myrtaceae, Myrteae) based on phylogenomic and Sanger data provide evidence for a Cerrado origin and geographically structured clades	13
The IS630/Tc1/mariner transposons in three ctenophore genomes	13
Extensive variation in nucleotide substitution rate and gene/intron loss in mitochondrial genomes of Pelargonium	13
Plastid genomes and phylogenomics of liverworts (Marchantiophyta): Conserved genome structure but highest relative plastid substitution rate in land plants	13
Total-evidence analysis resolves the phylogenetic position of an enigmatic group of Paederinae rove beetles (Coleoptera: Staphylinidae)	13
Resolving species-level diversity of Beringiana and Sinanodonta mussels (Bivalvia: Unionidae) in the Japanese archipelago using genome-wide data	13
A phylotranscriptome study using silica gel-dried leaf tissues produces an updated robust phylogeny of Ranunculaceae	13
Evolving in the darkness: Phylogenomics of Sinocyclocheilus cavefishes highlights recent diversification and cryptic diversity	13

A complete genus-level phylogeny reveals the Cretaceous biogeographic diversification of the poppy family	13
Phylogeny and diversification of planthoppers (Hemiptera: Fulgoromorpha) based on a comprehensive molecular dataset and large taxon sampling	13
In and out: Evolution of viral sequences in the mitochondrial genomes of legumes (Fabaceae)	12
Phylogeny and evolution of morphological structures in a highly diverse lineage of fruiting-body-forming amoebae, order Trichiales (Myxomycetes, Amoebozoa)	12
Genomic phylogeography illuminates deep cyto-nuclear discordances in midwife toads (Alytes)	12
Evolutionary history of inquiline social parasitism in Plagiolepis ants	12
Molecular phylogenetics of the Clupeiformes based on exon-capture data and a new classification of the order	12
Plastomes in the holoparasitic family Balanophoraceae: Extremely high AT content, severe gene content reduction, and two independent genetic code changes	12
Genome-wide data reveal extensive gene flow during the diversification of the western rattlesnakes (Viperidae: Crotalinae: Crotalus)	12
Phylogenetic relationships amongst the African genera of subtribe Orchidinae s.l. (Orchidaceae; Orchideae): Implications for subtribal and generic delimitations	12
Phylogenomic analyses resolve relationships among garter snakes (Thamnophis: Natricinae: Colubridae) and elucidate biogeographic history and morphological evolution	12
Himalayan orogeny and monsoon intensification explain species diversification in an endemic ginger (Hedychium: Zingiberaceae) from the Indo-Malayan Realm	12
Cryptic diversity in the model fern genus Ceratopteris (Pteridaceae)	12
King or royal family? Testing for species boundaries in the King Cobra, Ophiophagus hannah (Cantor, 1836), using morphology and multilocus DNA analyses	12
Evolution of vector transmitted parasites by host switching revealed through sequencing of Haemoproteus parasite mitochondrial genomes	12
A robust phylogenomic framework for the calamoid palms	12
How many long branch orders occur in Chelicerata? Opposing effects of Palpigradi and Opilioacariformes on phylogenetic stability	12
Depth as a driver of evolution and diversification of ancient squat lobsters (Decapoda, Galatheoidea, Phylladiorhynchus)	12
Evolution of reproductive strategies in the species-rich land snail subfamily Phaedusinae (Stylommatophora: Clausiliidae)	12
Mitogenomics of Cladocera (Branchiopoda): Marked gene order rearrangements and independent predation roots	12
From genomics to integrative species delimitation? The case study of the Indo-Pacific Pocillopora corals	12
Cyanobacteria in hot pursuit: Characterization of cyanobacteria strains, including novel taxa, isolated from geothermal habitats from different ecoregions of the world	12
A near-complete and time-calibrated phylogeny of the Old World flycatchers, robins and chats (Aves, Muscicapidae)	12
Taxon-rich transcriptomics supports higher-level phylogeny and major evolutionary trends in Foraminifera	12
Multilocus phylogeny of African striped grass mice (Lemniscomys): Stripe pattern only partly reflects evolutionary relationships	12
Combination of Sanger and target-enrichment markers supports revised generic delimitation in the problematic ‘Urera clade’ of the nettle family (Urticaceae)	12
Caucasian treasure: Genomics sheds light on the evolution of half-extinct Sevan trout, Salmo ischchan, species flock	12
Phylogenetics and an updated taxonomic status of the Tamarins (Callitrichinae, Cebidae)	12
A dated molecular phylogeny and biogeographical analysis reveals the evolutionary history of the trans-pacifically disjunct tropical tree genus Ormosia (Fabaceae)	12
Swimming through the sands of the Sahara and Arabian deserts: Phylogeny of sandfish skinks (Scincidae, Scincus) reveals a recent and rapid diversification	11
Speciation along the elevation gradient: Divergence of Roscoea species within the south slope of the Himalayas	11
A genomic survey of Tc1-mariner transposons in nematodes suggests extensive horizontal transposon transfer events	11
Multiple independent losses of cell mouth in phylogenetically distant endosymbiotic lineages of oligohymenophorean ciliates: A lesson from Clausilocola	11
Phylogenomic systematics of the spotted skunks (Carnivora, Mephitidae, Spilogale): Additional species diversity and Pleistocene climate change as a major driver of diversification	11
The phylogeny and global biogeography of Primulaceae based on high-throughput DNA sequence data	11
Phylogenomic analysis, reclassification, and evolution of South American nemesioid burrowing mygalomorph spiders	11
Types, topotypes and vouchers are the key to progress in coral taxonomy: Comment on Wepfer et al. (2020)	11
UCE data reveal multiple origins of rose gallers in North America: Global phylogeny of Diplolepis Geoffroy (Hymenoptera: Cynipidae)	11
Multilocus species-delimitation in the Xerotyphlops vermicularis (Reptilia: Typhlopidae) species complex	11
Phylogeny and secondary sexual trait evolution in Schizocosa wolf spiders (Araneae, Lycosidae) shows evidence for multiple gains and losses of ornamentation and species delimitation uncertainty	11
The first phylogenetic and species delimitation study of the nudibranch genus Gymnodoris reveals high species diversity (Gastropoda: Nudibranchia)	11
Diversification in Qinghai-Tibet Plateau: Orchidinae (Orchidaceae) clades exhibiting pre-adaptations play critical role	11
India’s biogeographic history through the eyes of blindsnakes- filling the gaps in the global typhlopoid phylogeny	11
Phylogeny and historical biogeography of the pantropical genus Parkia (Leguminosae, Caesalpinioideae, mimosoid clade)	11
Further insights into the phylogeny of peniculid ciliates (Ciliophora, Oligohymenophorea) based on multigene data	11
Molecular phylogeny and systematics of bald uakaris, genus Cacajao (Primates: Pitheciidae), with the description of a new species	11
Cryptic species in a colorful genus: Integrative taxonomy of the bush robins (Aves, Muscicapidae, Tarsiger) suggests two overlooked species	11
Tenebriella gen. nov. – The dark twin of Oscillatoria	11
Phylogenomics reveals ancient and contemporary gene flow contributing to the evolutionary history of sea ducks (Tribe Mergini)	11
Phylogeny and evolution of Cupressaceae: Updates on intergeneric relationships and new insights on ancient intergeneric hybridization	11
Due South: The evolutionary history of Sub-Antarctic and Antarctic Tritoniidae nudibranchs	11
Genetic similarities versus morphological resemblance: Unraveling a polyploid complex in a Mediterranean biodiversity hotspot	11
Evolution of host use in fungivorous ciid beetles (Coleoptera: Ciidae): Molecular phylogeny focusing on Japanese taxa	10
Evolution of 101 Apocynaceae plastomes and phylogenetic implications	10
Systematics, biogeography and evolution of the Saharo-Arabian naked-toed geckos genus Tropiocolotes	10
Target sequence capture of Barnadesioideae (Compositae) demonstrates the utility of low coverage loci in phylogenomic analyses	10
An Opiliones-specific ultraconserved element probe set with a near-complete family-level phylogeny	10
Evolutionary transitions in broad tapeworms (Cestoda: Diphyllobothriidea) revealed by mitogenome and nuclear ribosomal operon phylogenetics	10
Evolutionary relationships of anglerfishes (Lophiiformes) reconstructed using ultraconserved elements	10
Phylogenomics and diversification drivers of the Eastern Asian – Eastern North American disjunct Podophylloideae	10
Broad distribution, high diversity and ancient origin of the ApeC-containing proteins	10
Nuclear phylogenies and genomics of a contact zone establish the species rank of Podarcis lusitanicus (Squamata, Lacertidae)	10
Phylogenomics reveals novel relationships among Neotropical crocodiles (Crocodylus spp.)	10
Out of the Hengduan Mountains: Molecular phylogeny and historical biogeography of the Asian water snake genus Trimerodytes (Squamata: Colubridae)	10
Next-generation phylogeography of the banded newts (Ommatotriton): A phylogenetic hypothesis for three ancient species with geographically restricted interspecific gene flow and deep intraspecific gen	10
Neogene speciation and Pleistocene expansion of the genus Pseudephebe (Parmeliaceae, lichenized fungi) involving multiple colonizations of Antarctica	10
Non-adaptive evolutionary processes governed the diversification of a temperate conifer lineage after its migration into the tropics	10
Global phylogeny of the Shiitake mushroom and related Lentinula species uncovers novel diversity and suggests an origin in the Neotropics	10
Phylogenomic resolution of the Ceratitis FARQ complex (Diptera: Tephritidae)	10
Species limits and phylogeographic structure in two genera of solitary African mole-rats Georychus and Heliophobius	10
Phylogenomic analysis of evolutionary relationships in Ranitomeya poison frogs (Family Dendrobatidae) using ultraconserved elements	10
Complete genus-level plastid phylogenomics of Alismataceae with revisited historical biogeography	10
Macroevolutionary analyses point to a key role of hosts in diversification of the highly speciose eriophyoid mite superfamily	10
Gene flow in phylogenomics: Sequence capture resolves species limits and biogeography of Afromontane forest endemic frogs from the Cameroon Highlands	10
Stasis and diversity in living fossils: Species delimitation and evolution of lingulid brachiopods	10
Becoming a limpet: An ‘intermittent limpetization’ process driven by host features in the kleptoparasitic gastropod family Capulidae	10
Underestimated diversity: Cryptic species and phylogenetic relationships in the subgenus Cobalius (Coleoptera: Hydraenidae) from marine rockpools	10
The phylogenetic position of ridley's worm lizard reveals the complex biogeographic history of New World insular amphisbaenids	10