Molecular Phylogenetics and Evolution

Papers
(The median citation count of Molecular Phylogenetics and Evolution is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)
ArticleCitations
Revisiting evolutionary relationships of Antrodiaetus (Araneae, Mygalomorphae, Antrodiaetidae) using phylogenomics; implications for species diversity and biogeography of a persistent Holarctic lineag97
Peering through the hedge: Multiple datasets yield insights into the phylogenetic relationships and incongruences in the tribe Lilieae (Liliaceae)75
Editorial Board64
Erratum to “Disentangling historical relationships within Poeciliidae (Teleostei: Cyprinodontiformes) using ultraconserved elements” [Mol. Phylogenet. Evol. 190 (2024) 107965]62
When colors mislead: Genomics and bioacoustics prompt re-classification of Asian flycatcher radiation (Aves: Niltavinae)50
Resolving the phylogenetic relationship among recently diverged members of the rockfish subgenus Sebastosomus48
Phylogenomic insights into historical biogeography and species delimitation of African Ampelocissus (Vitaceae)45
Population genomics indicate three different modes of divergence and speciation with gene flow in the green-winged teal duck complex38
Providing a phylogenetic framework for trait-based analyses in brown algae: Phylogenomic tree inferred from 32 nuclear protein-coding sequences38
Resolving the deep phylogeny: Implications for early adaptive radiation, cryptic, and present-day ecological diversity of Papuan microhylid frogs34
Evolution of Potato virus X33
Recent evolution of extreme sexual dimorphism in the huia (Heteralocha acutirostris; Callaeidae)33
Disconnecting trapdoors: Phylogenomic analyses reveal evolutionary contrasts in trapdoor spiders with intercontinental distribution (Idiopidae, Idiopinae)33
ModelRevelator: Fast phylogenetic model estimation via deep learning32
Machine learning can be as good as maximum likelihood when reconstructing phylogenetic trees and determining the best evolutionary model on four taxon alignments32
Phylogenomics and biogeography of arid-adapted Chlamydogobius goby fishes32
The systematics and evolution of the Sri Lankan rainforest land snail Corilla: New insights from RADseq-based phylogenetics30
Incomplete lineage sorting and hybridization underlie tree discordance in Petunia and related genera (Petunieae, Solanaceae)30
Diversification and introgression in four chromosomal taxa of the Pearson’s horseshoe bat (Rhinolophus pearsoni) group29
Gauging ages of tiger swallowtail butterflies using alternate SNP analyses29
Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes29
Whole genome phylogenomics helps to resolve the phylogenetic position of the Zygothrica genus group (Diptera, Drosophilidae) and the causes of previous incongruences29
The distribution and characteristic of two transposable elements in the genome of Cydia pomonella granulovirus and codling moth29
Substrate specialisation drives an unexpectedly diverse radiation in barking geckos (Ptenopus: Gekkonidae)28
Corrigendum to “Phylogeography, hybridization, and species discovery in the Etheostoma nigrum complex (Percidae: Etheostoma: Boleosoma)” [Mol. Phylogenet. Evol. 178 (2023) 107645]28
Phylotranscriptomic relationships of the Oophila clade of green algae associated to amphibian egg masses28
Scaling the high latitudes: evolution, diversification, and dispersal of Coryphella nudibranchs across the Northern Hemisphere27
Redefining Chlorobotryaceae as one of the principal and most diverse lineages of eustigmatophyte algae27
Phylogenomics and biogeography of sawflies and woodwasps (Hymenoptera, Symphyta)27
Evolution, range formation and a revised taxonomy of the disjunctly distributed European members of Astragalus sect. Caprini, an intricate group including highly endangered species of dry grasslands26
Maturyoshka: A maturase inside a maturase, and other peculiarities of the novel chloroplast genomes of marine euglenophytes26
Plastid-nuclear coevolution of ribosomal protein genes in papilionoid legumes26
The evolution of primate malaria parasites: A study on the origin and diversification of Plasmodium in lemurs26
Temporal and spatial diversification along the Amazonia-Cerrado transition in Neotropical treefrogs of the Boana albopunctata species group26
Geological events and climate change drive diversification and speciation of mute cicadas in eastern continental Asia26
Phylogenomics and taxon-rich phylogenies of new and historical specimens shed light on the systematics of Hypnea (Cystocloniaceae, Rhodophyta)25
Repeat-based phylogenomics shed light on unclear relationships in the monocentric genus Juncus L. (Juncaceae)25
Phylogenomics and divergence pattern of Polygonatum (Asparagaceae: Polygonateae) in the north temperate region25
Sink or swim: Phylogenomic analysis of Baikal sculpins reveals multiple transformations to pelagic, bathybenthic, and lotic ecomorphologies25
Genomic phylogeography illuminates deep cyto-nuclear discordances in midwife toads (Alytes)25
Discordance between phylogenomic methods in Near Eastern mountain newts (Neurergus, Salamandridae)25
Exon-capture data resolve relationships resulting from a rapid radiation within family Gobiidae25
Phylogenetics and the evolution of terrestriality in mudskippers (Gobiidae: Oxudercinae)24
Molecular phylogenetics of the fresh water sleepers Odontobutis (Gobiiformes: Odontobutidae) and its implications on biogeography of freshwater ichthyofauna of East Asia24
Cenozoic colonisation of the Indian Ocean region by the Australian freshwater-originating glassperch family Ambassidae (Teleostei)24
Comprehensive taxon sampling and vetted fossils help clarify the time tree of shorebirds (Aves, Charadriiformes)24
Congruent patterns of cryptic cladogenesis revealed using RADseq and Sanger sequencing in a velvet worm species complex (Onychophora: Peripatopsidae: Peripatopsis sedgwicki)24
Mitochondrial genome and ultraconserved elements reveal a species complex within the Central American brocket deer Mazama temama (Artiodactyla: Cervidae)24
Phylogenomic reconstruction of Solenogastres (Mollusca, Aplacophora) informs hypotheses on body size evolution24
Nuclear phylogenomics of Eperua (Leguminosae) highlights the role of habitat and morphological lability in dispersal and diversification across Amazonia and in the Caatinga-Cerrado ecotone24
Phylogenetic placement and species delimitation of the crab spider genus Phrynarachne (Araneae: Thomisidae) from China23
Molecular phylogeny of deep-sea blind lobsters of the family Polychelidae (Decapoda: Polychelida), with implications for the origin and evolution of these “living fossils”23
Ocean crossers: A tale of disjunctions and speciation in the dwarf-fruticose Lichina (lichenized Ascomycota)23
Corrigendum to “Molecular systematics and global phylogeography of angel sharks (genus Squatina)” [Mol. Phylogenetics Evol. 54 (2010) 395–404]23
Phylogenetic relationships of the Geoplaninae land planarians (Platyhelminthes, Tricladida) assessed with a total evidence approach, with the description of a new species of Gigantea23
Recurrent founder-event speciation across the Mediterranean likely shaped the species diversity and geographic distribution of the freshwater snail genus Mercuria Boeters, 1971 (Caenogastropoda: Hydro22
Phylogenetic relationships and historical biogeography of silkmoths (Lepidoptera: Bombycidae) suggest an origin in Southern Gondwana22
Genomic SNPs resolve the phylogeny of an ancient amphibian island radiation from the Seychelles22
Deconstructing Difflugia: The tangled evolution of lobose testate amoebae shells (Amoebozoa: Arcellinida) illustrates the importance of convergent evolution in protist phylogeny22
Interspecific gene flow obscures phylogenetic relationships in an important insect pest species complex22
Dynamics and timing of diversification events of ciliated eukaryotes from a large phylogenomic perspective22
Phylogeny and historical biogeography of neotropical catfishes Trichomycterus (Siluriformes: Trichomycteridae) from eastern Brazil22
Genomic insights into the biogeography and evolution of Galápagos iguanas21
A new bunting species in South China revealed by an integrative taxonomic investigation of the Emberiza godlewskii complex (Aves, Emberidae)21
Editorial Board21
Molecular phylogeny, historical biogeography, and classification of Pseudocoladenia butterflies (Lepidoptera: Hesperiidae)21
Phylogenomics reveals climate-driven range expansion of the antlion tribe Megistopini (Neuroptera: Myrmeleontidae: Nemoleontinae) during the Oligocene-Miocene transition21
Resolving reticulate evolutionary histories of polyploid species of Azorella (Apiaceae) endemic to New Zealand21
The phylogeny and evolutionary ecology of hoverflies (Diptera: Syrphidae) inferred from mitochondrial genomes20
Editorial Board20
Study of epiphytic non-geniculate coralline algae Reveals an Evolutionarily significant Genus, Pseudoderma gen. nov. (Lithophylloideae, Corallinophycidae)20
Shining new light on naupliar eyes: A novel molecular phylogeny for Pleuromamma (Family: Metridinidae) and the characterization of luciferase and opsin expression20
Phylogeny and secondary sexual trait evolution in Schizocosa wolf spiders (Araneae, Lycosidae) shows evidence for multiple gains and losses of ornamentation and species delimitation uncertainty20
SNP-based phylogenomic inference in Holarctic ground squirrels (Urocitellus)19
Geological and climatic influences on population differentiation of the Phrynocephalus vlangalii species complex (Sauria: Agamidae) in the northern Qinghai-Tibet Plateau19
Phylogenomics AND biogeography of Castanea (chestnut) and Hamamelis (witch-hazel) – Choosing between RAD-seq and Hyb-Seq approaches19
Molecular evolutionary analyses of tooth genes support sequential loss of enamel and teeth in baleen whales (Mysticeti)19
A global phylogeny of the deep-sea gastropod family Scaphandridae (Heterobranchia: Cephalaspidea): Redefinition and generic classification19
A phylotranscriptome study using silica gel-dried leaf tissues produces an updated robust phylogeny of Ranunculaceae19
Divergence time and biogeography of the fungal genus Porodaedalea (Basidiomycota, Hymenochaetales), obligate phytopathogens on coniferous trees19
Diversity of Brachionus plicatilis species complex (Rotifera) in inland saline waters from China: Presence of a new mitochondrial clade on the Tibetan Plateau18
The hybridization origin of the Chinese endemic herb genus Notopterygium (Apiaceae): Evidence from population genomics and ecological niche analysis18
Plastid phylogenomics of the Sansevieria Clade of Dracaena (Asparagaceae) resolves a recent radiation18
Multiple independent losses of cell mouth in phylogenetically distant endosymbiotic lineages of oligohymenophorean ciliates: A lesson from Clausilocola18
A genomic survey of LINE elements in Pipidae aquatic frogs shed light on Rex-elements evolution in these genomes18
Gone with Gondwana: Amphipod diversification in freshwaters followed the breakup of the supercontinent18
Rearranging and completing the puzzle: Phylogenomic analysis of bark beetles Dendroctonus reveals new hypotheses about genus diversification17
Editorial Board17
Novel mating-type-associated genes and gene fragments in the genomes of Mycosphaerellaceae and Teratosphaeriaceae fungi17
Editorial Board17
The Sela macaque (Macaca selai) is a distinct phylogenetic species that evolved from the Arunachal macaque following allopatric speciation17
Phylogeny and biogeography of harmochirine jumping spiders (Araneae: Salticidae)17
Macroevolutionary analyses point to a key role of hosts in diversification of the highly speciose eriophyoid mite superfamily17
A new species of Populus and the extensive hybrid speciation arising from it on the Qinghai-Tibet Plateau17
Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida)17
Whole-genome resequencing unveils the phylogeographic coevolution of Oncomelania hupensis with Yangtze River dynamics in China17
Endogean habits drove cryptic diversification in Appalachian Lathrobium Gravenhorst (Coleoptera, Staphylinidae)16
Under the hood: Phylogenomics of hooded tick spiders (Arachnida, Ricinulei) uncovers discordance between morphology and molecules16
Structural dynamics of chloroplast genome in Paphiopedilum (Orchidaceae): in response to natural hybridization16
Deeply divergent freshwater fish species within a single river system in central Sulawesi16
Out of the desert: Paleoclimatic changes drove the diversification of arid-adapted Ocymyrmex ants in southern Africa16
Identifying a potentially invasive population in the native range of a species: The enlightenment from the phylogeography of the yellow spotted stink bug, Erthesina fullo (Hemiptera: Pentatomidae)15
A story of vicariance? how the geology of oceanic archipelagos influenced the evolutionary history of endemic damselflies15
Integrative approach to species delimitation in Rhizophydiales: Novel species of Angulomyces, Gorgonomyces, and Terramyces from northern Thailand15
Imperiled wanderlust lichens in steppe habitats of western North America comprise geographically structured mycobiont lineages and a reversal to sexual reproduction within this asexual clade15
Deciphering the drivers of speciation in Alpine Noccaea (Brassicaceae) reveal an evolution predominantly shaped by geography15
Editorial Board15
Following the aridity: Historical biogeography and diversification of the Philodromidae spider genus Petrichus in South America15
Genomic data provide a robust phylogeny backbone for Rhodiola L. (Crassulaceae) and reveal extensive reticulate evolution during its rapid radiation15
Phylogenomic analysis of Stylops reveals the evolutionary history of a Holarctic Strepsiptera radiation parasitizing wild bees15
Novel oceanic cyanobacterium isolated from Bangaram island with profound acid neutralizing ability is proposed as Leptolyngbya iicbica sp. nov. strain LK15
Corrigendum to “Molecular phylogeny and trait evolution in an ancient terrestrial arthropod lineage: Systematic revision and implications for ecological divergence (Collembola, Tomocerinae)” [Mol. Phy15
Phylogenetic relationships and the origin of New World soles (Teleostei: Pleuronectiformes: Achiridae): The role of estuarine habitats15
Integrative phylogenetic, phylogeographic and morphological characterisation of the Unio crassus species complex reveals cryptic diversity with important conservation implications15
Population structure in Mixornis tit-babblers across Sunda Shelf matches interfluvia of paleo-rivers15
Phylogenomics and historical biogeography of West Indian Rock Iguanas (genus Cyclura)14
Large-scale phylogenomics of the genus Macrostomum (Platyhelminthes) reveals cryptic diversity and novel sexual traits14
Peeling back the layers: First phylogenomic insights into the Ledebouriinae (Scilloideae, Asparagaceae)14
Phylogeny and evolution of dissimilatory sulfite reduction in prokaryotes14
A model of hybrid speciation process drawn from three new poplar species originating from distant hybridization between sections14
Exceptional levels of species discovery ameliorate inferences of the biogeography and diversification of an Afrotropical catfish family14
New evidence of consistency between phylogeny and morphology for two taxa in ciliated protists, the subclasses Oligotrichia and Choreotrichia (Protista, Ciliophora)14
Plastid phylogenomic analyses of the Selaginella sanguinolenta group (Selaginellaceae) reveal conflict signatures resulting from sequence types, outlier genes, and pervasive RNA editing14
Ecological speciation by sympatric host shifts in a clade of herbivorous sea slugs, with introgression and localized mitochondrial capture between species14
Explosion of goby fish diversity at the Eocene-Oligocene transition14
Skeleton phylogeny reconstructed with transcriptomes for the tribe Drosophilini (Diptera: Drosophilidae)14
The performance of outgroup-free rooting under evolutionary radiations14
Expanding Acutuncus: Phylogenetics and morphological analyses reveal a considerably wider distribution for this tardigrade genus14
How many long branch orders occur in Chelicerata? Opposing effects of Palpigradi and Opilioacariformes on phylogenetic stability14
Single cell transcriptomics reveals UAR codon reassignment in Palmarella salina (Metopida, Armophorea) and confirms Armophorida belongs to APM clade14
Diversification of the sleepers (Gobiiformes: Gobioidei: Eleotridae) and evolution of the root gobioid families14
In the land of the blind: Exceptional subterranean speciation of cryptic troglobitic spiders of the genus Tegenaria (Araneae: Agelenidae) in Israel14
Population genomics of the southern giraffe14
Molecular phylogenetics of the Clupeiformes based on exon-capture data and a new classification of the order13
Integrative taxonomy in a rapid speciation group associated with mating system transition: A case study in the Primula cicutariifolia complex13
Phylogenomic analyses of hamsters (Cricetinae) inferred from GBS data and mitochondrial genomes13
Paraphyly and cryptic diversity unveils unexpected challenges in the “naked lichens” (Calvitimela, Lecanoromycetes, Ascomycota)13
Plastid phylogenomics of the tribe potentilleae (Rosaceae)13
Evolution of andrenine bees reveals a long and complex history of faunal interchanges through the Americas during the Mesozoic and Cenozoic13
Phylogenetic revision of the lichenized family Gomphillaceae (Ascomycota: Graphidales) suggests post-K–Pg boundary diversification and phylogenetic signal in asexual reproductive structures13
Overwater dispersal from a single source island shaped the diversity of green anole lizards (Anolis carolinensis subgroup)13
Genomic and phenotypic characterization of Thermosynechococcus-like strains reveals eight species within the genus Thermosynechococcus and a novel genus Parathermosynechococcus gen. nov.13
Independent recruitment of FRUITFULL-like transcription factors in the convergent origins of vernalization-responsive grass flowering13
Phylogenetic origin of dioecious Callicarpa (Lamiaceae) species endemic to the Ogasawara Islands revealed by chloroplast and nuclear whole genome analyses13
When lizards shift to a more plant-based lifestyle: The macroevolution of mutualistic lizard-plant-interactions (Squamata: Sauria/Lacertilia)13
Exclusion of fast evolving genes or fast evolving sites produces different archaean phylogenies13
Mixed, not stirred: Genomic data confirm the first case of interspecific hybridization in planarian triclads (Platyhelminthes: Tricladida) and raise questions about a possibly novel form of hybrid spe13
A thorny tale: The origin and diversification of Cirsium (Compositae)13
Phylogenomic loci define the generic boundaries of Gochnatieae and improve resolution at the species level in Moquiniastrum (Compositae)13
Ultraconserved elements-based phylogenomic systematics of the snake superfamily Elapoidea, with the description of a new Afro-Asian family13
Phylogenomic evolutionary insights in the fern family Gleicheniaceae13
Phylogenomics offers new insights into the classification of Phytoseiidae (Acari: Mesostigmata)13
Plastome structure, evolution, and phylogeny of Selaginella13
Phylogenomic conflict analyses of the plastid and mitochondrial genomes via deep genome skimming highlight their independent evolutionary histories: A case study in the cinquefoil genus Potentilla sen13
A global blueberry phylogeny: Evolution, diversification, and biogeography of Vaccinieae (Ericaceae)13
Phylogenomic analysis, reclassification, and evolution of South American nemesioid burrowing mygalomorph spiders13
Phylogenetic systematics of Yphthimoides Forster, 1964 and related taxa, with notes on the biogeographical history of Yphthimoides species13
Out of Asia: Intercontinental dispersals after the Eocene-Oligocene transition shaped the zoogeography of Limenitidinae butterflies (Lepidoptera: Nymphalidae)13
Spider nest-retreat origin, diversification, and architectural plasticity link to historical and current temperature fluctuations12
Molecular systematics and phylogenetics of the spider genus Mastigusa Menge, 1854 (Araneae, Cybaeidae)12
Global diversification and evolutionary history of onchidiid slugs (Gastropoda, Pulmonata)12
Historical DNA solves century-old mystery on sessility in freshwater gastropods12
Evaluating species boundaries using coalescent delimitation in pine-killing Monochamus (Coleoptera: Cerambycidae) sawyer beetles12
Corrigendum to “Unravelling unknown cyanobacteria diversity linked with HCN production” [Mol. Phylogenet. Evol. 166 (2022) 107322]12
Editorial Board12
Out of southern Africa: Origins and cryptic speciation in Chamaeleo, the most widespread chameleon genus12
Diversification and evolutionary history of the African laminated-toothed rats (Rodentia, Otomyini)12
Integrated morphological and phylogenomic analyses revealed a novel genus Paramicrotoena (Lamiaceae − Pogostemoneae) discovered in the Pan-Himalaya12
Multi-locus phylogeny and species delimitations of the striped-back shrew group (Eulipotyphla: Soricidae): Implications for cryptic diversity, taxonomy and multiple speciation patterns12
Integrative taxonomy of the subfamily Orbioninae (Crustacea: Isopoda) based on mitochondrial and nuclear data with evidence that supports Epicaridea as a suborder12
Molecular phylogeny and divergence time of Harpalyce (Leguminosae, Papilionoideae), a lineage with amphitropical diversification in seasonally dry forests and savannas12
Hidden species diversity and mito-nuclear discordance within the Mediterranean cone snail, Lautoconus ventricosus12
Phylogenomics and diversification drivers of the Eastern Asian – Eastern North American disjunct Podophylloideae12
Patterns of diversification of the operculate land snail genus Cyclophorus (Caenogastropoda: Cyclophoridae) on the Ryukyu Islands, Japan12
A supermatrix phylogeny of the world’s bees (Hymenoptera: Anthophila)12
Australia’s hidden radiation: Phylogenomics analysis reveals rapid Miocene radiation of blindsnakes12
Phylogenomics and morphology of Celmisiinae (Asteraceae: Astereae): Taxonomic and evolutionary implications12
The phylogeny and global biogeography of Primulaceae based on high-throughput DNA sequence data12
Geographic isolation, ecological adaptation, and hybridization influenced fast divergence of a Solanaceae plant group from subtropical highland grasslands12
Phylogeny, character evolution, and biogeography of the fern genus Bolbitis (Dryopteridaceae)12
Evolutionary insights from the pangenome and pigment profiles of Parasynechococcus11
Phylogenomics of Anguis and Pseudopus (Squamata, Anguidae) indicates Balkan-Apennine mitochondrial capture associated with the Messinian event11
Horizontally transferred glycoside hydrolase 26 may aid hemipteran insects in plant tissue digestion11
Phylogeny and evolution of morphological structures in a highly diverse lineage of fruiting-body-forming amoebae, order Trichiales (Myxomycetes, Amoebozoa)11
Phylogenomic analyses of ochrophytes (stramenopiles) with an emphasis on neglected lineages11
A comprehensive molecular phylogeny of the genus Sylvirana (Anura: Ranidae) highlights unrecognized diversity, revised classification and historical biogeography11
Intra-island patterns of cryptic diversity within an oceanic island: Insights from the differentiation of Schizidium Verhoeff, 1901 (Oniscidea, Armadillidiidae) within Cyprus, with descriptions of two11
Phylogenomic systematics of the spotted skunks (Carnivora, Mephitidae, Spilogale): Additional species diversity and Pleistocene climate change as a major driver of diversification11
A subfunctionalisation model of gene family evolution predicts balanced tree shapes11
The role of introgressive hybridization in shaping the geographically isolated gene pools of wax palm populations (genus Ceroxylon)11
Editorial Board11
Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods11
Evolving in the darkness: Phylogenomics of Sinocyclocheilus cavefishes highlights recent diversification and cryptic diversity11
Deciphering phylogenetic relationships of and delimiting species boundaries within the controversial ciliate genus Conchophthirus using an integrative morpho-evo approach11
The phylogenomics and evolutionary dynamics of the organellar genomes in carnivorous Utricularia and Genlisea species (Lentibulariaceae)11
Abundant incongruence in a clade endemic to a biodiversity hotspot: Phylogenetics of the scrub mint clade (Lamiaceae)11
Diversity of Wolbachia infection and its influence on mitochondrial DNA variation in the diamondback moth, Plutella xylostella11
Genome skimming elucidates the evolutionary history of Octopoda11
Multiple origins of two Ochrosia (Apocynaceae) species endemic to the Bonin (Ogasawara) Islands11
Taxonomic insights and evolutionary history in East Asian terrestrial slugs of the genus Meghimatium11
Molecular phylogenetics, speciation, and long distance dispersal in tardigrade evolution: A case study of the genus Milnesium11
A straightforward workflow to explore species diversity using the Patagonian lizards of the Diplolaemus genus (Iguania: Leiosauridae) as a study case, with the description of a new species11
Out of the ancient lake: Multiple riverine colonizations and diversification of the freshwater snails in the genus Semisulcospira around Lake Biwa11
Biogeography and evolution of social parasitism in Australian Myrmecia bulldog ants revealed by phylogenomics11
Monophyly of diverse Bigyromonadea and their impact on phylogenomic relationships within stramenopiles11
A new molecular phylogeny for the Tanypodinae (Diptera: Chironomidae) places the Australian diversity in a global context11
Disentangling conflicting molecular phylogenetic signals in nuclear and plastid DNA of the western Eurasian-Mediterranean grass genus Cynosurus and its relatives (Poaceae subtribes Cynosurinae and Par11
Genomic data reveal local endemism in Southern California Rubber Boas (Serpentes: Boidae, Charina) and the critical need for enhanced conservation actions11
Two new tardigrade genera from New Zealand’s Southern Alp glaciers display morphological stasis and parallel evolution11
Phylogenomic and morphological evidence supports the reinstatement of the bamboo genus Clavinodum from Oligostachyum (Poaceae: Bambusoideae)11
An ultraconserved element probe set for velvet worms (Onychophora)11
Editorial Board10
Phylogenomic workflow for uncultivable microbial eukaryotes using single-cell RNA sequencing − A case study with planktonic ciliates (Ciliophora, Oligotrichea)10
Diversification in the mountains: Evolutionary history and molecular phylogeny of Anatolian rock lizards10
Species delimitation using genomic data to resolve taxonomic uncertainties in a speciation continuum of pelagic seabirds10
Species divergence and phylogeography of Corylus heterophylla Fisch complex (Betulaceae): Inferred from molecular, climatic and morphological data10
Phylogeography of recent Plesiastrea (Scleractinia: Plesiastreidae) based on an integrated taxonomic approach10
Phylogenomics and species delimitation of an abundant and little-studied Amazonian forest spiny rat10
A transcriptome-based phylogeny for Polynoidae (Annelida: Aphroditiformia)10
Species delimitation and phylogenomics of economically important African Pterocarpus trees, with an implication for the development of DNA-based species identification tools10
Jumping through hoops: Structural rearrangements and accelerated mutation rates on Dendrodorididae (Mollusca: Nudibranchia) mitogenomes rumble their evolution10
Evolution of the Sabulina verna group (Caryophyllaceae) in Europe: A deep split, followed by secondary contacts, multiple allopolyploidization and colonization of challenging substrates10
Interpreting phylogenetic conflict: Hybridization in the most speciose genus of lichen-forming fungi10
Understanding early stages of speciation: Allopatric divergence, introgression and chromosomal dynamics in the Erysimum odoratum species complex10
Convergent evolution in nuclear and mitochondrial OXPHOS subunits underlies the phylogenetic discordance in deep lineages of Squamata10
Phylogenomic insights into the historical biogeography, character-state evolution, and species diversification rates of Cypripedioideae (Orchidaceae)10
Updated phylogeny of Vestimentifera (Siboglinidae, Polychaeta, Annelida) based on mitochondrial genomes, with a new species10
Genotyping-by-sequencing elucidates the species limits of Ukrainian taxa within Veronica subg. Pseudolysimachium10
Diversification dynamics of a common deep-sea octocoral family linked to the Paleocene-Eocene thermal maximum10
Phylogenomics resolves the puzzling phylogeny of banded newts (genus Ommatotriton)10
Out of the Himalaya-Hengduan Mountains: Phylogenomics, biogeography and diversification of Polygonatum Mill. (Asparagaceae) in the Northern Hemisphere10
Biome conservatism prevailed in repeated long-distance colonization of Madagascar’s mountains by Helichrysum (Compositae, Gnaphalieae)10
Molecular phylogenetics reveals the evolutionary history of marine fishes (Actinopterygii) endemic to the subtropical islands of the Southwest Pacific10
Hyper-Cryptic radiation of a tropical montane plant lineage10
Diversification of freshwater crabs on the sky islands in the Hengduan Mountains Region, China10
Molecular phylogeny and systematics of bald uakaris, genus Cacajao (Primates: Pitheciidae), with the description of a new species9
Molecular signature characters complement taxonomic diagnoses: A bioinformatic approach exemplified by ciliated protists (Ciliophora, Oligotrichea)9
A combined phylogenetic strategy illuminates the evolution of Goniodorididae nudibranchs (Mollusca, Gastropoda, Heterobranchia)9
The phylogeny and divergence times of leaf-mining flies (Diptera: Agromyzidae) from anchored phylogenomics9
Diversity, biogeography, and reproductive evolution in the genus Pipa (Amphibia: Anura: Pipidae)9
Population connectivity across a highly fragmented distribution: Phylogeography of the Chalcophaps doves9
The tangled evolutionary history of a long-debated Mesoamerican taxon: The Velazquez Woodpecker (Melanerpes santacruzi, Aves: Picidae)9
A multi-gene phylogeny of the Asian kukri snakes (Oligodon Fitzinger, 1826): Sharpening the blade of the second largest serpent radiation (Reptilia: Squamata: Colubridae)9
Phylogenomic analysis resolves the evolutionary pattern of diversification of cyanobacteria and reveals the evolutionary affinity of novel Antarctic lineages9
Systematic position of the Clicking Frog (Kassinula Laurent, 1940), the problem of chimeric sequences and the revised classification of the family Hyperoliidae9
Corrigendum to “Genomic and phenotypic characterization of Thermosynechococcus-like strains reveals eight species within the genus Thermosynechococcus and a novel genus Parathermosynechococcus gen. no9
Phylogenetics and an updated taxonomic status of the Tamarins (Callitrichinae, Cebidae)9
Phylogenomics of the superfamily Lygaeoidea with proposals on taxonomic system (Hemiptera: Heteroptera)9
Genomic insights into the phylogeny and evolutionary history of scale insects (Hemiptera: Coccoidea): Resolving family-level relationships9
Exon-capture data and locus screening provide new insights into the phylogeny of flatfishes (Pleuronectoidei)9
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