Trends in Microbiology

Papers
(The TQCC of Trends in Microbiology is 20. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-11-01 to 2025-11-01.)
ArticleCitations
Subscription and Copyright Information248
Advisory Board and Contents234
Loading and unloading plasmid cargoes207
Navigating trust and science: microbiome research in the Amazon154
Nuclear antiviral innate responses at the intersection of DNA sensing and DNA repair141
Molecular mechanisms and drivers of pathogen emergence137
Reductive biomining of pyrite by methanogens132
Early-life chemical exposome and gut microbiome development: African research perspectives within a global environmental health context126
Unearthing terrestrial extreme microbiomes for searching terrestrial-like life in the Solar System114
Cross-correlation of virome–bacteriome–host–metabolome to study respiratory health109
Scientific mobility in microbiology – 2106
Projecting global biological N2 fixation under climate warming across land and ocean106
Klebsiella pneumoniae emerging anti-immunology paradigms: from stealth to evasion105
Likelihood of amyloid formation in COVID-19-induced ARDS101
Geminiviruses also encode small proteins with specific functions100
Revisiting AMPylation through the lens of Fic enzymes97
Programming therapeutic probiotics by self-tunable sense-and-respond genetic circuits94
Better together? Lessons on sociality from Trichodesmium93
Advisory Board and Contents93
Senescent cell: the ‘factory of viral amplification’86
Subscription and Copyright Information83
Advisory Board and Contents82
Advisory Board and Contents80
Masking of typical TLR4 and TLR5 ligands modulates inflammation and resolution by Helicobacter pylori78
Starvation helps transition to abundance – a ferrosome story78
RNase III-CLASH brings bacterial RNA networks into focus78
The HIPS 2024 symposium: highlighting advances in pharmaceutical sciences in infection research75
Sulfur traits in the plant microbiome: implications for sustainable agriculture74
Subscription and Copyright Information73
Tradeoffs and constraints on the evolution of tailocins71
Scientific mobility in microbiology – 469
Disease-causing human viruses: novelty and legacy68
Toward an integrative framework for microbial community coalescence68
Biological interactions with Prochlorococcus: implications for the marine carbon cycle67
The roles of calcium signaling and calcium deposition in microbial multicellularity67
Metabolic flux phenotyping of secondary metabolism in cyanobacteria67
Advisory Board and Contents65
Fast phages outcompete by depleting host resources61
Scientific mobility in microbiology – 960
Scientific mobility in microbiology – 1060
On the biological meaning of the population pangenome58
Subscription and Copyright Information58
Retaining African networks is urgent for global health57
Interplay between endogenous and exogenous human retroviruses56
Microbiome selection and evolution within wild and domesticated plants55
Recent advances in modelling Shigella infection55
Bacterial dual phototrophy was demystified55
CIFAR humans and the microbiome: Banff meeting report54
Severe respiratory viral infections: T-cell functions diverging from immunity to inflammation54
Disentangling the microbial ecological factors impacting honey bee susceptibility to Paenibacillus larvae infection53
Aspergillus nidulans53
Advisory Board and Contents53
Advisory Board and Contents52
Subscription and Copyright Information52
The ambivalent role of Bacteroides in enteric infections51
Microbial nanowires: type IV pili or cytochrome filaments?51
Exploring the shared pathogenic strategies of independently evolved effectors across distinct plant viruses51
Cutting-edge tools for unveiling the dynamics of plasmid–host interactions51
HCV egress – unconventional secretion of assembled viral particles51
Deep-sea microbial genetic resources: new frontiers for bioprospecting50
Revisiting methane-dependent denitrification49
When ferroptosis meets pathogenic infections49
Moonlighting antibiotics: the extra job of modulating biofilm formation49
Cysteine and resistance to oxidative stress: implications for virulence and antibiotic resistance49
A role for bacterial experimental evolution in coral bleaching mitigation?48
Synergy between microalgae and microbiome in polluted waters47
Towards a trait-based framework for protist ecology and evolution47
Deciphering bacterial protein functions with innovative computational methods46
The conserved AvrE family of bacterial effectors: functions and targets during pathogenesis46
Chitinase-assisted winner: nematodes antagonize symbiotic microbes45
Symbiotic bacteria and pest control: plant toxins, chemical pesticides, and fungal entomopathogens45
Phage tRNAs: decoding the enigma44
Scientific mobility in microbiology – 744
Genetics of dengue epidemics44
Rethinking microbially driven methane formation in mangrove wetlands43
Regulation of microbial gene expression: the key to understanding our gut microbiome43
Diagnosing arthropod-borne flaviviruses: non-structural protein 1 (NS1) as a biomarker43
Exploring emerging drug responses in Cryptococcus43
From advisors to mentors: fostering supportive mentorship in academia43
SNAREs: a double-edged sword for intravacuolar bacterial pathogens within host cells43
Models are useful until high-resolution structures are available42
Cap-tivating findings provide insight into bacterial cell division42
Future focuses of enzymatic plastic degradation42
Membrane lipid composition defines membrane protein spectrum40
Sex shapes gut–microbiota–brain communication and disease39
Respiration-induced biofilm formation as a driver for bacterial niche colonization39
Adaptations of intracellular bacteria to vacuolar or cytosolic niches39
Modeling nontuberculous mycobacterial infections in zebrafish39
Plasmid-mediated colistin-resistance genes: mcr38
Advisory Board and Contents37
Gut microbiome-mediated mechanisms for reducing cholesterol levels: implications for ameliorating cardiovascular disease37
A unique bacterial family strikes again!37
Small intestinal microbiota: from taxonomic composition to metabolism37
Subscription and Copyright Information37
Endogenous retroviruses in development and health37
Flagellar evolution and flagella-independent motility in Actinobacteria36
Role of metabolism in uropathogenic Escherichia coli36
Hypermutator fungal pathogens: from threat to meltdown36
Saccharolobus islandicus35
T6SS: killing two bugs with one stone35
The abortive infection functions of CRISPR-Cas and Argonaute35
Focus on the pathogen defense arsenal35
How should health researchers advance health equity?34
Broadening the targetable space: engineering and discovery of PAM-flexible Cas proteins34
C4 cereal and biofuel crop microbiomes34
Lignocellulolytic microbiomes for augmenting lignocellulose degradation in anaerobic digestion33
Reference errors in microbiology literature: 'pyroptosis' and others33
Breaking bad nucleotides: understanding the regulatory mechanisms of bacterial small alarmone hydrolases33
A framework for understanding and predicting orthohantavirus functional traits33
Current advances on Vip3 highlight the promising potential of bacterial insecticidal proteins33
Pseudomonas fluorescens33
Anaerocellum (f. Caldicellulosiruptor) bescii32
Cutting-edge tools for structural biology: bringing AlphaFold to the people32
Should I stay or should I go: transmission trade-offs in phages and plasmids32
The role of cyclic nucleotides in bacterial antimicrobial resistance and tolerance32
Epigenetic maneuvering: an emerging strategy for mycobacterial intracellular survival31
Pseudomonas aeruginosa: persistence beyond antibiotic resistance31
Inorganic polyphosphate in host and microbe biology31
Human–gut bacterial protein–protein interactions: understudied but impactful to human health31
A structural understanding of influenza virus genome replication31
Ecology of the respiratory tract microbiome31
Diverse molecular mechanisms underpinning Staphylococcus aureus small colony variants31
Advisory Board and Contents30
Participatory antimicrobial stewardship: fostering patient and public engagement to counter antimicrobial resistance30
New perspectives into the vaginal microbiome with systems biology30
Bacterial peptidoglycan recycling30
Cellular roadmaps of viroid infection29
The emerging role of bacterial regulatory RNAs in disease29
ARGuing the case for (or against) probiotics29
Harnessing CRISPR-Cas for oomycete genome editing29
Gut microbiota–bile acid–skeletal muscle axis29
Tracking contemporary microbial evolution in a changing ocean29
Subscription and Copyright Information28
Neutrophils – an understudied bystander in dengue?28
Broadening oncological boundaries: the intratumoral microbiota28
Methane-dependent denitrification by Methylomirabilis: an indirect nitrous oxide sink?28
RNA modifications in plant pathogenic fungi: from epitranscriptomics to antifungal strategies28
Subscription and Copyright Information27
Subscription and Copyright Information27
Subscription and Copyright Information27
Advisory Board and Contents27
Structural diversity and modularity of photosynthetic RC−LH1 complexes26
Advisory Board and Contents26
Immune evasion strategies of major tick-transmitted bacterial pathogens26
Bacterial quorum sensing and phenotypic heterogeneity: how the collective shapes the individual26
Modeling soil bacterial diversity: challenges and opportunities26
Beyond butyrate: microbial fiber metabolism supporting colonic epithelial homeostasis26
The biosynthesis and role of phosphorylcholine in pathogenic and nonpathogenic bacteria26
Microbial life in slow and stopped lanes25
Antiphage small molecules produced by bacteria – beyond protein-mediated defenses25
Exploiting enzymes as a powerful tool to modulate the gut microbiota24
Towards efficient immunotherapy for bacterial infection24
Intentional and unintentional benefits of minority writing accountability groups24
Advisory Board and Contents24
Protein biomethanation: insight into the microbial nexus24
Expanding diversity and ecological roles of RNA viruses24
NCR peptides in plant–bacterial symbiosis: applications and importance24
Rickettsia parkeri24
Scientific mobility in microbiology – 124
Advisory Board and Contents23
Colonization factors of human and animal-specific enterotoxigenic Escherichia coli (ETEC)23
HIV-1-induced translocation of CPSF6 to biomolecular condensates23
CRISPR-Cas: a game-changer in vaccine development and the fight against viral infections23
Trade-offs in microbial-assisted restoration under recurring drought23
How hepatitis E virus invades hepatocytes: the mystery of viral entry22
Enhancing agroecosystem nitrogen management: microbial insights for improved nitrification inhibition22
Targeting gut microbiota to counteract acetaminophen-induced acute liver injury22
Gonococcal PorB: a multifaceted modulator of host immune responses22
Current trends in electromicrobiology of methane oxidation22
Strategies for developing phages into novel antimicrobial tailocins22
Microbial biostimulants – the need for clarification in EU regulation22
Extracellular vesicles: new bullets in the fungal armory22
Two-step recognition of HIV-1 DNA in the cytosol21
Podospora anserina21
Epulopiscium spp.21
Advances in host-directed therapy for tuberculosis and HIV coinfection: enhancing immune responses21
Microbes guide corals looking to find a home21
FtsK and SpoIIIE, coordinators of chromosome segregation and envelope remodeling in bacteria21
Genome-powered classification of microbial eukaryotes: focus on coral algal symbionts21
Ecological principles of fecal microbiota transplantation21
Exploiting predatory bacteria as biocontrol agents across ecosystems20
Viral manipulation of host cell necroptosis and pyroptosis20
Impacts of trophic interactions on carbon accrual in soils20
Subscription and Copyright Information20
Not all RNAs are created equal for the antiviral RNase ISG2020
Subscription and Copyright Information20
Why do hosts malfunction without microbes? Missing benefits versus evolutionary addiction20
Anaerobic oxidation of short-chain volatile alkanes20
Host cell environments and antibiotic efficacy in tuberculosis20
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