OOIR: Observatory of International Research

Papers

(The TQCC of Mammalian Genome is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-08-01 to 2026-08-01.)

Article	Citations
Primary biliary cirrhosis and rheumatoid arthritis: a comprehensive study combining genetics and transcriptomics	63
Unraveling the maternal heritage: identifying the complex origins of indigenous Indian horse and pony breeds through mitochondrial genome analysis	28
Glycosylated protein-related microenvironmental features in breast cancer are associated with patient prognosis	27
Cancer-associated TRF1 mutations alter PARP1 interaction dynamics: an in silico study	24
Polymorphisms in IRF3 exon 1 influence the immune response to Brucella infection in small ruminants	21
Genetic and immune landscape of keratoconus: insights from Mendelian randomization analysis	20
CPNE1 modulates Parkinson’s disease risk through peripheral immune cell function: a cross-tissue and single-cell causal inference study	19
Evaluation of genotype imputation using Glimpse tools on low coverage ancient DNA	16
Comprehensive analysis reveals the prognostic and immunological role of PSMD13 in hepatocellular carcinoma	16
Contrasting the genetic architecture of cardiac glutathione against other organs: unveiling a unique tissue-specific locus	16
Elucidating the therapeutic targets and multi-target mechanisms of salvianolic acid A for diabetic nephropathy	16
Detection of a complex chromosomal rearrangement in a novel mouse mutant by optical genome mapping	16
Standardisation and future of preclinical echocardiography	15
Climate resilience in goats: a comprehensive review of the genetic basis for adaptation to varied climatic conditions	15
Genome-wide in-silico identification and characterization of LTR retrotransposons in domestic goat (Capra hircus)	14
Comparative single-cell analysis of the adult heart and coronary vasculature	14
Introduction to Mammalian Genome special issue: cardiovascular disease in the Mammalian Genome.	13
Identification of shared hub genes CTNNB1, TJP1, PTK2, and TP53 associated with endothelial proliferation in infantile hemangioma and glioblastoma	13
Evaluation of genomic breeding values and accuracy for carcass traits in Korean Hanwoo cows using whole-genome SNP chip panels	12
Review on camel genetic diversity: ecological and economic perspectives	12
EEF1A2 identified as a hub gene associated with the severity of metabolic dysfunction-associated steatotic liver disease	11
Integrative immunogenomic and experimental characterization reveals CXCL9, CXCL13, CCL5 and CD74 as key oncogenic drivers in breast cancer	11
AgAnimalGenomes: browsers for viewing and manually annotating farm animal genomes	11
Impaired immune metabolism in COPD driven by dysfunction of CXCL16 + alveolar macrophages: multivariate causal evidence	11
E2F2 inhibits hippocampal neurogenesis in poststroke depression rats via the miR-1290/CBR1 axis	11

Copy number evolution of conserved noncoding RNA gene families across mammals	11
Neurodevelopment as a shared genetic etiology linking sleep-related phenotypes and psychiatric disorders: a genome-wide pleiotropic analysis	10
IMPC impact on preclinical mouse models	10
Generation of a humanized mAce2 and a conditional hACE2 mouse models permissive to SARS-COV-2 infection	9
Alpha-synuclein pathology and Parkinson’s disease-related olfactory dysfunctions: an update on preclinical models and therapeutic approaches	9
Neonatal lethality of mouse A/J-7SM consomic strain is caused by an insertion mutation in the Dchs1 gene	9
Are we fully exploiting genetic discoveries to understand and treat Alzheimer’s disease?	9
The mouse resource at National Resource Center for Mutant Mice of China	8
Cell-type-specific causal effects of CEBPD in CD8 + S100B + Tcells and ZFP36 in monocytes modulate the protective and risk phenotypes in psoriasis	8
TCR CDR3 chemical complementarity to HPV epitopes is associated with a better outcome for cervical cancer	8
Elucidation of genetic determinants of dyslipidaemia using a global screening array for the early detection of coronary artery disease	8
Transforming beef quality through healthy breeding: a strategy to reduce carcinogenic compounds and enhance human health: a review	8
Commentary: towards a national research infrastructure strategy for preclinical biological models in Australia	8
Exploring the molecular function of LYPD3 from pan-cancer to lung cancer: based on bioinformatics and cellular experiments	8
Genome-wide SNP evidence for the genetic uniqueness of indigenous cattle population	8
Genetic insights into crossbred dairy cattle of Pakistan: exploring allele frequency, linkage disequilibrium, and effective population size at a genome-wide scale	8
Comprehensive overview of disease models for Wolfram syndrome: toward effective treatments	8
Knockdown of SOX4 attenuates sepsis myocardial injury by inhibiting the EZH2/H3K27me3/SOCS3 axis	8
Multi-omics dissection of RAD21-PON1 axis reveals metabolic-immune crosstalk and prognostic significance in hepatocellular carcinoma	8
Insights from homozygous signatures of cervus nippon revealed genetic architecture for components of fitness	7
Purebred dogs show higher levels of genomic damage compared to mixed breed dogs	7
Harmonizing mouse anatomy terminology: a common language?	7
Long-read whole-genome sequencing of SHR rat substrains with distinct substance use phenotypes	7
Predicting the potential deterioration of Barrett’s esophagus based on gut microbiota: a Mendelian randomization analysis	7
Comparative genomic studies on the TGF-β superfamily in blue whale	7
Exploration of shared diagnostic genes and mechanisms between crohn’s disease and ischemic stroke by integrated comprehensive bioinformatics analysis and machine learning	7
A fascination with tailless mice: a scientific historical review of studies of the T/t complex	7
A consensus score to combine inferences from multiple centres	7
Maternal genetic diversity and phylogenetic analysis of Indian riverine and swamp buffaloes: insights from complete mitochondrial genomes	7
Arginine attenuates chronic mountain sickness in rats via microRNA-144-5p	6
The mutant mouse resource and research center (MMRRC) consortium: the US-based public mouse repository system	6
Genome-wide study for signatures of selection identifies genomic regions and candidate genes associated with milk traits in sheep	6
Alantolactone curbs the malignant progression of bladder cancer partly via the HSP90AB1/LRP5/β-catenin axis	6
Identification of EXO1 as a potential biomarker associated with prognosis and tumor immune microenvironment for specific human cancers	6
E3 ubiquitin ligase COP1-mediated CEBPB ubiquitination regulates the inflammatory response of macrophages in sepsis-induced myocardial injury	6
Comprehensive analysis of chromosomal breakpoints and candidate genes associated with male infertility: insights from cytogenetic studies and expression analyses	6
Tachol1 QTL on mouse chromosome 1 is responsible for hypercholesterolemia and diet-induced obesity	6
Dynamics and regulatory role of 5-methylcytosine modification in mRNA colocalized with RNA G-quadruplex structure in mouse development	6
Three-dimensional microCT imaging of mouse heart development from early post-implantation to late fetal stages	6
Enhanced computational strategies for categorizing HER2 kinase domain variants of uncertain significance through structural and functional analysis	5
Challenges of modelling TDP-43 pathology in mice	5
Genome engineering with Cas9 and AAV repair templates, successes and pitfalls	5
Elucidation of population stratifying markers and selective sweeps in crossbred Landlly pig population using genome-wide SNP data	5
Swine global genomic resources: insights into wild and domesticated populations	5
MicroRNA dysregulation in male infertility: Insights into mechanisms, biomarkers, and therapeutic strategies- review	5
AHDSN: an attention-enabled hybrid deep sequential network for cancer survivability prediction from multi-omics data	5
Combined single-cell RNA sequencing and mendelian randomization to identify biomarkers associated with circadian rhythm in sarcopenia	5
Mammalian genome research resources available from the National BioResource Project in Japan	4
Identification and validation of PANX1 as an inflammasome-related biomarker in gestational diabetes mellitus: insights from machine learning and experimental approaches	4
Mapping copy number variable regions correlated with reproduction and production traits in Karan Fries cattle mammalian genomics	4

Recent advances in the genomic resources for sheep	4
Impact of IL-6 rs1800795 and rs1800796 polymorphisms on clinical outcomes of COVID-19: a study on severity of disease in Turkish population	4
Multi-omics analysis of HLTF context-dependent regulation across TCGA cohorts revealed its potential as new biomarker in tumour	4
Junctions in Jeopardy: the neuromuscular junction is a selective pathological target in Charcot-Marie-Tooth disease	4
A comprehensive review of livestock development: insights into domestication, phylogenetics, diversity, and genomic advances	4
Inflammatory cytokines are associated with stroke and risk factors of cerebrovascular diseases: a Mendelian randomization study	4
Identification of prostate cancer associated genes for diagnosis and prognosis: a modernized in silico approach	4
Genetic factors underlying Mandibular prognathism: insights from recent human and animal studies	4
Genomic advancements in goat breeding: enhancing productivity, disease resistance, and sustainability in India’s rural economy	4
Comprehensive analysis of breast cancer oxidative stress related gene signature: a combination of bulk and single-cell RNA sequencing analysis	4
Genome-wide detection of copy number variations in indigenous Red Sindhi cattle using ddRAD sequencing	4
Echo2Pheno: a deep-learning application to uncover echocardiographic phenotypes in conscious mice	4
The interplay of hydrogen sulfide and microRNAs in cardiovascular diseases: insights and future perspectives	4
Genome-wide screening for genetic variants in polyadenylation signal (PAS) sites in mouse selection lines for fatness and leanness	4
Complementarity and integration of animal and in vitro non-animal pre-clinical model systems– an Australian perspective	4
Polyunsaturated fatty acid metabolism in the retinal pigment epithelium and its association with outer retinal disease	4
Identification of important gene signatures in schizophrenia through feature fusion and genetic algorithm	4
Mouse phenome database: curated data repository with interactive multi-population and multi-trait analyses	4
CDC167 exhibits potential as a biomarker for airway inflammation in asthma	4
Genome assembly of the Neotropical marsh rat Holochilus nanus (Cricetidae: Sigmodontinae) brings insights on B and sex chromosome evolution	4