OOIR: Observatory of International Research

Papers

(The median citation count of Mammalian Genome is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-03-01 to 2025-03-01.)

Article	Citations
Identification of a critical interval for type 2 diabetes QTL on chromosome 4 in DDD-Ay mice	62
Sequence and haplotypes of ankyrin 1 gene (ANK1) and their association with carcass and meat quality traits in yak	47
Missing heritability of Wilson disease: a search for the uncharacterized mutations	43
Associations between SNP83 of phosphodiesterase 4D gene and carotid atherosclerosis in a southern Chinese Han population: a case–control study	42
Standardisation and future of preclinical echocardiography	41
Retraction Note: MiR-519d-3p enhances the sensitivity of non-small-cell lung cancer to tyrosine kinase inhibitors	34
Retraction Note: Circ_0069718 promotes the progression of breast cancer by up-regulating NFIB through sequestering miR-590-5p	31
Genome-wide study for signatures of selection identifies genomic regions and candidate genes associated with milk traits in sheep	30
RMRP inhibition prevents NAFLD progression in rats via regulating miR-206/PTPN1 axis	25
Exploring key genes and pathways associated with sex differences in autism spectrum disorder: integrated bioinformatic analysis	23
Cytosolic nucleic acid sensing and mitochondrial transcriptomic changes as early triggers of metabolic disease in db/db mice	22
Evaluation of genotype imputation using Glimpse tools on low coverage ancient DNA	21
GWAS reveals genomic associations with swine inflammation and necrosis syndrome	20
Elucidation of population stratifying markers and selective sweeps in crossbred Landlly pig population using genome-wide SNP data	20
Mouse genomic and cellular annotations	20
Comprehensive ECG reference intervals in C57BL/6N substrains provide a generalizable guide for cardiac electrophysiology studies in mice	19
Arginine attenuates chronic mountain sickness in rats via microRNA-144-5p	18
E3 ubiquitin ligase COP1-mediated CEBPB ubiquitination regulates the inflammatory response of macrophages in sepsis-induced myocardial injury	18
A map of canine sequence variation relative to a Greenland wolf outgroup	17
The COL6A5-p.Glu2272* mutation induces chronic itch in mice	16
The alliance of genome resources: transforming comparative genomics	15
Molecular determination of progesterone receptor’s PROGINS allele (Alu insertion) and its association with the predisposition and susceptibility to polycystic ovary syndrome (PCOS)	15
Genetics of murine type 2 diabetes and comorbidities	13
Designing libraries for pooled CRISPR functional screens of long noncoding RNAs	13
Mechanism of CREB1 in cardiac function of rats with heart failure via regulating the microRNA-376a-3p/TRAF6 axis	13

Systems genetics analysis of oral squamous cell carcinoma susceptibility using the mouse model: current position and new perspective	12
An interaction of inorganic arsenic exposure with body weight and composition on type 2 diabetes indicators in Diversity Outbred mice	12
LncRNAs PSMG3-AS1 and MEG3 negatively regulate each other to participate in endometrial carcinoma cell proliferation	12
Fast and efficient generation of a full-length balancer chromosome by a single Cre/loxP recombination event	12
Polygenic control of the wavy coat of the NCT mouse: involvement of an intracisternal A particle insertional mutation of the protease, serine 53 (Prss53) gene, and a modifier gene	11
Three-dimensional microCT imaging of mouse heart development from early post-implantation to late fetal stages	11
Genomic resources for rhesus macaques (Macaca mulatta)	11
Comprehensive analysis of chromosomal breakpoints and candidate genes associated with male infertility: insights from cytogenetic studies and expression analyses	10
Murine allele and transgene symbols: ensuring unique, concise, and informative nomenclature	10
Coding variants in mouse and rat model organisms: mousepost and ratpost	10
The mutant mouse resource and research center (MMRRC) consortium: the US-based public mouse repository system	10
Taxonomic composition and variation in the gut microbiota of laboratory mice	9
Mouse Genome Informatics (MGI): latest news from MGD and GXD	9
Intestinal cancer development in response to oral infection with high-fat diet-induced Type 2 diabetes (T2D) in collaborative cross mice under different host genetic background effects	9
EEF1A1 transcription cofactor gene polymorphism is associated with muscle gene expression and residual feed intake in Nelore cattle	9
Mouse models of aneuploidy to understand chromosome disorders	9
The microbiome and rodent models of immune mediated diseases	9
Comprehensive analysis reveals the prognostic and immunological role of PSMD13 in hepatocellular carcinoma	8
Unraveling the maternal heritage: identifying the complex origins of indigenous Indian horse and pony breeds through mitochondrial genome analysis	8
Tachol1 QTL on mouse chromosome 1 is responsible for hypercholesterolemia and diet-induced obesity	8
Climate resilience in goats: a comprehensive review of the genetic basis for adaptation to varied climatic conditions	8
LncRNAs in domesticated animals: from dog to livestock species	7
Genetic factors underlying host resistance to Rhipicephalus microplus tick infestation in Braford cattle: a systems biology perspective	7
Telemedical monitoring in patients with inborn cardiac disease – experience of a tertiary care centre	7
Correction: A fascination with tailless mice: a scientific historical review of studies of the T/t complex	7
Identification of EXO1 as a potential biomarker associated with prognosis and tumor immune microenvironment for specific human cancers	7
Bridging mouse and human anatomies; a knowledge-based approach to comparative anatomy for disease model phenotyping	7
Introduction to mammalian genome special issue: the microbiome in human health and disease	6
Genome-wide insights into selection signatures for transcription factor binding sites in cattle ROH regions	6
CTNNB1 syndrome mouse models	6
LncRNA NEAT1 sponges miR-214 to promoted tumor growth in hepatocellular carcinoma	6
Knockdown of lncRNA MIAT attenuated lipopolysaccharide-induced microglial cells injury by sponging miR-613	6
The calcimedin annexin A3 displays tumor-promoting effect in esophageal squamous cell carcinoma by activating NF-κB signaling	6
Knockdown of lncRNA LUCAT1 attenuates sepsis‑induced myocardial cell injury by sponging miR-642a	5
Investigating DNA damage caused by COVID-19 and influenza in post COVID-19	5
Pan-cancer TCGA analysis reveals the potential involvement of B-type lamins in dysregulating chromosome segregation in human cancer	5
Comparative single-cell analysis of the adult heart and coronary vasculature	5
Genetics of mouse behavioral and peripheral neural responses to sucrose	5
Genome engineering with Cas9 and AAV repair templates, successes and pitfalls	5
Asian Mouse Mutagenesis Resource Association (AMMRA): mouse genetics and laboratory animal resources in the Asia Pacific	5
Host genetic control of gut microbiome composition	5
Exploring the mediating role of immune cells in the pathogenesis of IgA nephropathy through the inflammatory axis of gut microbiota from a genomic perspective	5
Association of gene polymorphisms in MYH11 and TGF-β signaling with the susceptibility and clinical outcomes of DeBakey type III aortic dissection	5
Commentary: The International Mouse Phenotyping Consortium: high-throughput in vivo functional annotation of the mammalian genome	5
Fine mapping and candidate gene analysis of a dravet syndrome modifier locus on mouse chromosome 11	5
35th International Mammalian Genome Conference: meeting overview	5
Methods for vascularization and perfusion of tissue organoids	5
MicroRNA expression profiling of ovine epithelial cells stimulated with the Staphylococcus aureus in vitro	4
Multiple genome viewer (MGV): a new tool for visualization and comparison of multiple annotated genomes	4
Preclinical research (on rare diseases): we need to talk about health equity	4

RETRACTED ARTICLE: Circ_0069718 promotes the progression of breast cancer by up-regulating NFIB through sequestering miR-590-5p	4
The mouse resource at National Resource Center for Mutant Mice	4
Canine models of inherited retinal diseases: from neglect to well-recognized translational value	4
Identification of biomarkers associated with phagocytosis regulatory factors in coronary artery disease using machine learning and network analysis	4
A rationale for considering heart/brain axis control in neuropsychiatric disease	4
Genetic diversity of North African populations in the 17q21 genomic region	4
Swine global genomic resources: insights into wild and domesticated populations	4
Correction: Canine models of inherited retinal diseases: from neglect to well-recognized translational value	4
RETRACTED ARTICLE: CircRNA_0043691 sponges miR-873-3p to promote metastasis of gastric cancer	4
Mitral valve transcriptome analysis in thirty-four age-matched Cavalier King Charles Spaniels with or without congestive heart failure caused by myxomatous mitral valve disease	3
Diverse wild-derived inbred strains provide a new community resource	3
The human urobiome	3
Assessing the causal relationship between immune cells and prostatitis: evidence from bidirectional mendelian randomization analysis	3
Introduction to Mammalian Genome special issue: cardiovascular disease in the Mammalian Genome.	3
Retraction Note to: miR-217-5p inhibits invasion and metastasis of prostate cancer by targeting clusterin	3
The Rat Genome Database (RGD) facilitates genomic and phenotypic data integration across multiple species for biomedical research	3
RETRACTED ARTICLE: miR-217-5p Inhibits Invasion and Metastasis of Prostate Cancer by Targeting Clusterin	3
A comprehensive phenotypic characterization of a whole-body Wdr45 knock-out mouse	3
The birth of piRNAs: how mammalian piRNAs are produced, originated, and evolved	3
A review of standardized high-throughput cardiovascular phenotyping with a link to metabolism in mice	3
Importing genetically altered animals: ensuring quality	3
E3 ubiquitin ligase MARCH1 reduces inflammation and pyroptosis in cerebral ischemia-reperfusion injury via PCSK9 downregulation	3
Lessons from the functional characterization of lncRNAs: introduction to mammalian genome special issue	3
Genomic and functional conservation of lncRNAs: lessons from flies	3
The regulation mechanisms and the Lamarckian inheritance property of DNA methylation in animals	3
RETRACTED ARTICLE: CircRNA circ-ATAD1 is downregulated in endometrial cancer and suppresses cell invasion and migration by downregulating miR-10a through methylation	3
SAF-A mutants disrupt chromatin structure through dominant negative effects on RNAs associated with chromatin	3
A review on the role of gut microbiota in immune checkpoint blockade therapy for cancer	3
Alternative exon splicing and differential expression in pancreatic islets reveals candidate genes and pathways implicated in early diabetes development	3
Runs of homozygosity and signatures of selection for number of oocytes and embryos in the Gir Indicine cattle	3
Silencing circ_0074371 inhibits the progression of sepsis-induced acute kidney injury by regulating miR-330-5p/ELK1 axis	3
Retraction Note: CircRNA circ-ATAD1 is downregulated in endometrial cancer and suppresses cell invasion and migration by downregulating miR-10a through methylation	3
New mouse model for inducible hACE2 expression enables to dissect SARS-CoV-2 pathology beyond the respiratory system	3
What to consider for ECG in mice—with special emphasis on telemetry	3
EGFR and MMP-9 are associated with neointimal hyperplasia in systemic-to-pulmonary shunts in children with complex cyanotic heart disease	2
Genome-wide screening for genetic variants in polyadenylation signal (PAS) sites in mouse selection lines for fatness and leanness	2
Revealing the key role of cuproptosis in osteoporosis via the bioinformatic analysis and experimental validation of cuproptosis-related genes	2
In search of epigenetic hallmarks of different tissues: an integrative omics study of horse liver, lung, and heart	2
Circular RNA circMTO1 suppressed the progression of renal cell carcinoma progression by sponging miR-211 and miR-204	2
Causal relationship between imaging-derived phenotypes and neurodegenerative diseases: a Mendelian randomization study	2
Significance of lncRNA abundance to function	2
Adipose tissue depot specific expression and regulation of fibrosis-related genes and proteins in experimental obesity	2
Identification of prostate cancer associated genes for diagnosis and prognosis: a modernized in silico approach	2
Unraveling the genetic and physiological potential of donkeys: insights from genomics, proteomics, and metabolomics approaches	2
TUG1 knockdown suppresses cardiac fibrosis after myocardial infarction	2
A comprehensive review of livestock development: insights into domestication, phylogenetics, diversity, and genomic advances	2
AgAnimalGenomes: browsers for viewing and manually annotating farm animal genomes	2
A deletion containing a CTCF-element in intron 8 of the Bbs7 gene is partially responsible for juvenile obesity in the Berlin Fat Mouse	2
A nonsense mutation in mouse Adamtsl2 causes uterine hypoplasia and an irregular estrous cycle	2
Review on camel genetic diversity: ecological and economic perspectives	2
The effect of different approaches to determining the regularization parameter of bayesian LASSO on the accuracy of genomic prediction	2
Whole-genome sequencing and genomic analysis of Norduz goat (Capra hircus)	2
Mammalian genome research resources available from the National BioResource Project in Japan	1
Genomic distribution and polymorphism of G-quadruplex motifs occupying ovine promoters and enhancers	1
Fins, fur, and wings: the study of Tmem161b across species, and what it tells us about its function in the heart	1
Nonhuman primates’ tissue banks: resources for all model organism research	1
Pyroptosis is involved in the immune microenvironment regulation of unexplained recurrent miscarriage	1
Identification of novel biomarkers for atherosclerosis using single-cell RNA sequencing and machine learning	1
34th International mammalian genome conference: meeting overview	1
Bivariate GWAS reveals pleiotropic regions among feed efficiency and beef quality-related traits in Nelore cattle	1
EEF1A2 identified as a hub gene associated with the severity of metabolic dysfunction-associated steatotic liver disease	1
Swine models for translational oncological research: an evolving landscape and regulatory considerations	1
Transcriptome studies of inherited dilated cardiomyopathies	1
Best practices for analyzing imputed genotypes from low-pass sequencing in dogs	1
Metagenomics: a path to understanding the gut microbiome	1
Echo2Pheno: a deep-learning application to uncover echocardiographic phenotypes in conscious mice	1
Promises and challenges of cardiac organoids	1
Mutational analyses of novel rat models with targeted modifications in inflammatory bowel disease susceptibility genes	1
Rat Models of Human Diseases and Related Phenotypes: A Novel Inventory of Causative Genes	1
Progress towards completing the mutant mouse null resource	1
Protein family FAM241 in human and mouse	1
Genetic controls of Tas1r3-independent sucrose consumption in mice	1
SNPs at 3′UTR of APOL1 and miR-6741-3p target sites associated with kidney diseases more susceptible to SARS-COV-2 infection: in silco and in vitro studies	1
Of mice and human-specific long noncoding RNAs	1
Genomic patterns of selection in morphometric traits across diverse Indian cattle breeds	1
Generation of a humanized mAce2 and a conditional hACE2 mouse models permissive to SARS-COV-2 infection	1
Comprehensive selection signature analyses in dairy cattle exploiting purebred and crossbred genomic data	1
The interplay of hydrogen sulfide and microRNAs in cardiovascular diseases: insights and future perspectives	1
Regulatory roles of nucleolus organizer region-derived long non-coding RNAs	1
Knockdown of UCA1 attenuated the progression of alcoholic fatty disease by sponging miR-214	1