Virus Genes

Article	Citations
Immune response induced by recombinant pres2/S-protein and a pres2-S-protein fused with a core 18-27 antigen fragment of hepatitis B virus compared to conventional HBV vaccine	54
Characterization of the functional domains of nuclear shuttle protein (NSP) of Indian cassava mosaic virus using green fluorescent protein as reporter	27
The genetic and biological characterization of the first avian paramyxovirus serotype 14 isolated from chicken in China	24
Identification and whole-genome characterization of a novel equine papillomavirus	20
Antiviral siRNA delivered using attenuated, anthrax toxin protects cells from the cytopathic effects of Zika virus	20
Emergence of foot-and-mouth disease virus SAT 1 topotype III in Iran: molecular and phylogenetic analysis	19
Correction: First reports of several viruses and a viroid including a novel vitivirus in Japan, found through virome analysis of bulk grape genetic resources	19
Genetic analysis of the SH gene of mumps virus genotype C in Kerala during 2024–25	19
Whole-genome characterization of Newcastle disease virus isolates of sub-genotype VII.1.1 from chickens in Ethiopia	19
The H5N1-NS1 protein affects the host cell cycle and apoptosis through interaction with the host lncRNA PIK3CD-AS2	18
Genome sequence analysis of H7N3 subtype avian influenza virus originated from wild birds and its potential infectivity in mice	17
New lytic and new temperate Staphylococcus hyicus phages	17
Aborted infection of human sodium taurocholate cotransporting polypeptide (hNTCP) expressing woodchuck hepatocytes with hepatitis B virus (HBV)	17
Bioinformatic identification of monkeypox virus phylogenetic gene trees that are representative of its whole-genome phylogenetic tree	16
Identification and characterization of a novel Robigovirus infecting wild cherry trees in Tunisia	15
Domestic cat hepadnavirus genotype B is present in Southern Brazil	14
MiR-339-5p inhibits replication of porcine reproductive and respiratory syndrome virus by targeting viral gene regions	14
Molecular detection and genetic characterization of pestiviruses associated with abortion in domestic small ruminants in Türkiye	13
Comparative genomics and evolutionary analysis of dengue virus strains circulating in Pakistan	13
Lineage and sublineage analysis of human papillomavirus types 51 and 59 in Iranian women	13
Nuclear respiratory factor 1 promotes the progression of EBV-associated gastric cancer and maintains EBV latent infection	12
Expanding geographical and genetic footprint of tobacco streak virus in Northern India: first documentation from cotton in Haryana	12
Characterization of two novel fusariviruses co-infecting a single isolate of phytopathogenic fungus Botrytis cinerea	12
Mutations in the S gene of hepatitis B virus in three generations of patients with chronic hepatitis B	11
First detection and diversity of astroviruses in wild migratory birds of Sakhalin Island, North Pacific	11

Complete genome sequence analysis and biological characteristics of Newcastle disease viruses from different hosts in China	11
Molecular characterization of a novel variant of infectious bronchitis virus from field outbreaks in backyard chicken population of North East India	11
Sequence analysis of the Spike, RNA-dependent RNA polymerase, and protease genes reveals a distinct evolutionary pattern of SARS-CoV-2 variants circulating in Yogyakarta and Central Java provinces, In	11
Gushan virus: a newly discovered virus found in mosquitoes of Shandong, China	11
Co-circulation of two Mumps virus genotypes in Assam, India	11
Whole genome sequencing and evolution analyses of Human metapneumovirus	10
Genotypic characterization of Japanese encephalitis virus circulating in swine population of India: Genotype-III still in dominance	10
Aedes aegypti Totivirus identified in mosquitoes in the Brazilian Amazon region	10
Characterization and genomic analysis of a novel bacteriophage BUCT_49532 lysing Klebsiella pneumoniae	10
Investigating the antiviral effects of Timosaponin BII on enterovirus A/B via network pharmacology and experimental validation	10
Cell line engineering for enhanced measles virus production with sphingosine kinase 1 gene overexpression	9
Characterization of human parainfluenza virus type 2 circulating in southern France between 2017 and 2022 using whole-genome sequencing	9
Increased virulence of a novel reassortant H1N3 avian influenza virus in mice as a result of adaptive amino acid substitutions	9
Pan-serotype reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay targeting 2B-NSP coding region for colorimetric detection of foot-and-mouth disease virus in clinical samples	9
Characterization of a breakthrough vaccine escape strain associated with overt hepatitis B virus infection	9
The disappearance of ORF8 in human-adapted coronaviruses: the Cheshire cat paradigm	9
Correction to: Characterization of the first Rubus yellow net virus genome from blackberry	9
Insights of HIV-1 and HBV transcriptional regulation by viral transactivator Tat and HBx	9
Transient expression analysis of promoters of okra enation leaf curl virus in Nicotiana benthamiana, cotton and okra plants	9
RNA sequencing of avian paramyxovirus (Paramyxoviridae, Avulavirinae) isolates from wild mallards in Belgium, 2021: complete genomes and coinfections	9
Phylogenetic analysis of porcine reproductive and respiratory syndrome virus in Vietnam, 2021	8
Whole genome sequencing and genomic characterization of a DS-1-like G2P[4] group A rotavirus in Japan	8
Isolation and genomic characterization of a cypovirus from Clanis bilineata	8
Complete genome sequence of Xanthomonas phage M29, a new member of Foxunavirus isolated in the Czech Republic	8
Whole-genome characterization of avian picornaviruses from diarrheic broiler chickens co-infected with multiple picornaviruses in Iran	8
Characterization of Phietavirus Henu 2 in the virome of individuals with acute gastroenteritis	8
Isolation, characterization, and genomic analysis of vB_PaeS_TUMS_P81, a lytic bacteriophage against Pseudomonas aeruginosa	8
Molecular and phylogenetic analysis of influenza A and B viruses circulating in Sri Lanka following the COVID-19 pandemic	8
Leucoma salicis nucleopolyhedrovirus (LesaNPV) genome sequence shed new light on the origin of the Alphabaculovirus orpseudotsugatae species	8
Genomic analysis identifies unreported adaptive mutations in monkeypox virus immune evasion genes	8
Discovery and genome analysis of Yunxiao leafhopper virus 1 in Recilia dorsalis	8
The genome evolution of Marek’s disease viruses in chickens and turkeys in China	8
Detectable episodic positive selection in the virion strand a-strain Maize streak virus genes may have a role in its host adaptation	7
Molecular characterization and genetic analysis of highly pathogenic H5N1 clade 2.3.4.4b in seagulls from Dukan Lake, Iraq	7
Duck sewage source coliphage P762 can lyse STEC and APEC	7
Whole-genome characterization and antigenic analysis of two distinct duck-origin H6 Subtype avian influenza viruses in China	7
Cucumber mosaic virus infection does not increase the translocation of the green fluorescent protein from GM rootstock to non-GM scion in transgrafted plants	7
SCD1 inhibits HBV replication by regulating autophagy under high lipid conditions	6
RNA-viromics unveils diverse RNA viral communities in Large-billed crows and Northern Ravens	6
The complete genomic sequence of Magnaporthe oryzae polymycovirus 1	6
Reverse transcription recombinase-aided amplification assay for avian influenza virus	6
Long non-coding RNA C1RL-AS1 aggravates influenza A virus pneumonia through miR-16-5p/LAMP3	6
Surveillance reveals a prevalent pediatric A(H1N1)pdm09 virus with hemagglutinin substitutions S137P-R142K-V152I that diminish vaccine efficacy	6
A new polymycovirus infecting a clinical isolate of the entomopathogenic and fungicolous fungus Lecanicillium aphanocladii affects pigmentation, sporulation, and antifungal susceptibility of its host	6
Hantavirus Brno loanvirus is highly specific to the common noctule bat (Nyctalus noctula) and widespread in Central Europe	6
Association of RBD mutations with COVID-19 disease severity in the Iranian population	5
Characterization of two novel reassortant bluetongue virus serotype 1 strains isolated from farmed white-tailed deer (Odocoileus virginianus) in Florida, USA	5
The arrival of highly pathogenic avian influenza viruses H5N8 in Iran through two windows, 2016	5
Genetic characteristics of a novel HIV-1 recombinant lineage (CRF103_01B) and its prevalence in northern China	5
Characterization and genome analysis of Klebsiella phages with lytic activity against Klebsiella pneumoniae	5

Correction: Elevated oncogene expressions in koala infected with multiple koala retrovirus subtypes: a preliminary study	5
The complete genome of equid herpesvirus-1 (EHV-1) field isolates from Argentina reveals an interspecific recombinant strain	5
Genotype-resolved NS5 stability predicts Japanese encephalitis virus fitness	5
Foreign gene expression attenuates a virulent Newcastle disease virus in chickens	5
Expression of F1L, a vaccinia virus H3L transmembrane protein analogue of orf virus, and its successful purification as a diagnostic antigen	5
A virus from Aspergillus cibarius with features of alpha- and betachrysoviruses	5
Muramidase, nuclease, or hypothetical protein genes intervene between paired genes encoding DNA packaging terminase and portal proteins in Wolbachia phages and prophages	5
Isolation and characterization of a novel reassortant H3N8 avian influenza virus from chickens in Eastern China	5
Prevalence of Epstein-Barr virus and JC virus in tissue samples of gastric cancer, non-malignant, and controls by polymerase chain reaction in northwest Iran	5
Transcriptome analysis of Spodoptera RNA-seq data unveils new viruses within the family Rhabdoviridae	5
Comparative genomics of the Neodiprion sertifer nucleopolyhedrovirus from Turkey with the fewest ORFs among baculoviruses	4
The use of an avian macrophage-like cell line (HD11) transduced with recombinant lentiviruses to dissect the immunomodulatory role of Marek’s disease virus gene products	4
Antibacterial effects of single phage and phage cocktail against multidrug-resistant Klebsiella pneumoniae isolated from diabetic foot ulcer	4
Phylogenetic analysis and molecular genetic characteristics of West Nile virus lineage 2 isolates circulating in the Russian Federation	4
Genomic characterization of Seoul virus from Rattus norvegicus in Buenos Aires city, Argentina	4
Effect of HDAC9-induced deacetylation of glycolysis-related GAPDH lysine 219 on rotavirus replication in rotavirus-infected Caco-2 cells	4
Characterization of the proteins encoded by a recently emerged cotton-infecting Polerovirus	4
Factors influencing the prevalence of acute bee paralysis virus in Apis mellifera and insights into its phylogenetic relationships	4
Characterization of the first Rubus yellow net virus genome from blackberry	4
Shrimp classification for white spot syndrome detection through enhanced gated recurrent unit-based wild geese migration optimization algorithm	4
H4N6 avian influenza virus in Iran: first isolation and molecular insights	4
Phylogenetic and diversity analyses revealed that leek yellow stripe virus population consists of three types: S, L, and N	4
Global population dynamics and evolutionary selection in classical swine fever virus complete genomes: insights from Bayesian coalescent analysis	4
Pseudorabies virus as a zoonosis: scientific and public health implications	4
Isolation and characterization of a novel reassortant strain of Orthoreovirus mammalis from diarrheic pig	4
Correction: The complete genomic sequence of Magnaporthe oryzae polymycovirus 1	4
Genetic analysis of human parainfluenza type 2 virus in Riyadh, Saudi Arabia	4
Establishment and application of a duplex fluorescent quantitative PCR assay for H9N2 subtype avian influenza virus and infectious bronchitis virus	4
Comprehensive genomic analysis of rabies virus in India reveals distinct lineages and evolutionary stability	4
Characterization, phylogeny and recombination of Rhynchosia yellow mosaic virus infecting Rhynchosia minima, a wild relative of pigeonpea (Cajanus cajan) from India	4
Genome sequence of a Sobemovirus from the feces of Northern Pintail (Anas acuta)	3
Correction: Complete genome and molecular characterization of spiranthes mosaic virus 3 from Phlox paniculata	3
Generation of an infectious cDNA clone of BJ-Swzp-2022, a Group III Isolate of Getah Virus	3
Molecular phylodynamics of fowl adenovirus serotype 11 and 8b from inclusion body hepatitis outbreaks	3
Complete genome and molecular characterization of a putative novel citrivirus from Rudbeckia sp.	3
The potential emerging role of piRNA/PIWI complex in virus infection	3
Small RNA sequencing analysis reveals regulation of microRNA expression in Madin–Darby canine kidney epithelial cells infected with Canid alphaherpesvirus 1	3
Establishment of a reverse genetics system for feline panleukopenia virus and feasibility study of a live vector vaccine	3
Enhancement of bactericidal effects of bacteriophage and gentamicin combination regimen against Staphylococcus aureus and Pseudomonas aeruginosa strains in a mice diabetic wound model	3
Structure and function of the parvoviral NS1 protein: a review	3
First detection of a recombinant enterovirus G carrying a torovirus papain-like cysteine protease gene from India	3
Pooled screening for endogenous HHV-6 in subjects with coronary artery disease	3
Identification of monoclonal antibody targeting epitope on p72 trimeric spike of African swine fever virus	3
Porcine epidemic diarrhea virus E protein induces unfolded protein response through activating both PERK and ATF6 rather than IRE1 signaling pathway	3
Jojan: a novel virus that lyses Stenotrophomonas maltophilia from dog	3
Comparative transcriptomic and machine learning analysis identifies key genes and immune dysregulation in goats exposed to peste des petits ruminants virus	3
Ibudilast and dipyridamole ameliorate murine γ-herpesvirus 68-induced acute hepatitis following airway infection	3
Molecular characterization of human astrovirus infection in children under 5 years of age with acute gastroenteritis in Tehran, Iran, 2021–2022: co-infection with rotavirus	3
Study of Hsp90α and Hsp90β role in virus replication using cell lines with Hsp90 gene knockouts	3
The emergence of novel Iranian variants in sheeppox and goatpox viral envelope proteins with remarkably altered putative binding affinities with the host receptor	3
Recent advances in treatment and detection of Rift Valley fever virus: a comprehensive overview	3
Construction and efficacy of a recombinant QX-like infectious bronchitis virus vaccine strain	3
Raising Awareness About Compromised Cell Lines, Better Science Practices, and Accountability	3
Molecular analysis of the env, LTR, and pX regions of bovine leukemia virus in dairy cattle of Türkiye	3
Diversity of viroids infecting grapevines in the South African Vitis germplasm collection	3
Exploring the role of YBX3 in PEDV infection through the utilization of YBX3 knockout and overexpression cell lines	3
Spillover of Newcastle disease virus to Himalayan Griffon vulture: a possible food-based transmission	3
Molecular characterization and comparison of tomato zonate spot virus isolated in Japan and China	3
Detection of seronegative occult hepatitis C infection in blood donors and hospital patients from Argentina	3
Dispersion and diversification of Lyssavirus rabies transmitted from haematophagous bats Desmodus rotundus: a phylogeographical study	2
Molecular detection of monkeypox and related viruses: challenges and opportunities	2
Do HBsAg subdeterminants matter for vaccination against hepatitis B?	2
First reports of several viruses and a viroid including a novel vitivirus in Japan, found through virome analysis of bulk grape genetic resources	2
Label-free proteomics analysis on the envelope of budded viruses of Bombyx mori nucleopolyhedrovirus harboring differential localized GP64	2
Full-genome sequence of a novel potyvirus infecting Sauropus androgynus	2
First detection and genomic characterization of ungulate tetraparvovirus 1 in water buffalo (Bubalus bubalis) from vietnam	2
Aquaporin-3 is down-regulated by LMP1 in nasopharyngeal carcinoma cells to regulate cell migration and affect EBV latent infection	2
A therapeutic approach for the hepatitis C virus: in silico design of an antisense oligonucleotide-based candidate capsid inhibitor	2
Guinea pig herpes like virus is a gamma herpesvirus	2
Isolation of the novel phage SAP71 and its potential use against Staphylococcus aureus in an atopic dermatitis mouse model	2
RHDV 3C protein antagonizes type I interferon signaling by cleaving interferon promoter stimulated 1 protein	2
First report of the whole-genome sequence analysis of avian rotavirus A from Japanese chickens	2
Attenuated African swine fever virus through serial passaging of viruses in cell culture: a brief review on the knowledge gathered during 60 years of research	2
Reintroduction of highly pathogenic avian influenza A H7N9 virus in southwestern China	2
Unraveling potential gene biomarkers for dengue infection through RNA sequencing	2
Detection and molecular epidemiology of canine parvovirus and identification of highly pathogenic CPV-2c isolates from Shandong, China	2
Characterization and phylogenetic analysis of bovine gammaherpesvirus 4 isolated in China, 2022	2
Construction and characterisation of glycoprotein E and glycoprotein I deficient mutants of Australian strains of infectious laryngotracheitis virus using traditional and CRISPR/Cas9-assisted homologo	2
A preliminary study on the regulatory role of phosphoribosyl pyrophosphate synthetase 2 in vesicular stomatitis virus infection	2
Detection of hepatitis B virus (HBV) genotypes and co-infection with Torque Teno Virus (TTV) in HBV-positive patients at a tertiary care center in Puducherry, India	2

Decoding codon usage in human papillomavirus type 59	2
Complete genomic sequences and comparative analysis of two Orf virus isolates from Guizhou Province and Jilin Province, China	2
A genetically-distinct Pigeon Paramyxovirus-I isolate fails to cross-react with neutralizing antibodies raised by LaSota vaccine in chicken	2
Molecular functions of HAX1 during disease progress	2
Phylogenetic analyses of the spread of Clade I MPOX in African and non-African nations	2
First detection and characterization of Bovine parvovirus 2 and Bopivirus A in a neonatal calf with diarrhea in Iran through metagenomic RNA-seq	2
Identification and complete genome sequencing of a divergent olive virus T isolate and an olive leaf yellowing-associated virus isolate naturally infecting olive trees in Greece	2
Alphanudiviral segments found in transcriptomes of the two-spotted spider mite, Tetranychus urticae (Acari: Tetranychidae)	2
me53 encoded by Autographa californica multiple nucleopolyhedrovirus: from mechanism to function	2
A genetically novel avian Hepatitis E virus in China	2
Development and application of a multiplex qPCR assay for the detection of duck circovirus, duck Tembusu virus, Muscovy duck reovirus, and new duck reovirus	2
Analysis of SARS-CoV-2 omicron mutations that emerged during long-term replication in a lung cancer xenograft mouse model	2
The full genome characterization of avian encephalomyelitis virus, Iran: a vertical transmission case	2
Identification and epidemiological analysis of a putative novel hantavirus in Australian flying foxes	2
Detection and typing of dengue virus by one-step RT-PCR-based high-resolution melting assay	2
Development and application of a real-time fluorescent RAA assay for H9 subtype avian influenza viruses	2