Virus Genes

Article	Citations
A systematic review of genotypes and serogroups of African swine fever virus	35
An overview of influenza A virus genes, protein functions, and replication cycle highlighting important updates	22
A SARS-CoV-2 mutant from B.1.258 lineage with ∆H69/∆V70 deletion in the Spike protein circulating in Central Europe in the fall 2020	22
Biological characteristics and genomic analysis of a Stenotrophomonas maltophilia phage vB_SmaS_BUCT548	20
Evolutionary and recombination analysis of porcine reproductive and respiratory syndrome isolates in China	20
Identification of a phage-derived depolymerase specific for KL64 capsule of Klebsiella pneumoniae and its anti-biofilm effect	16
Comparison of third-generation sequencing approaches to identify viral pathogens under public health emergency conditions	16
Exploration of plant transcriptomes reveals five putative novel poleroviruses and an enamovirus	15
Analysis of public domain plant transcriptomes expands the phylogenetic diversity of the family Secoviridae	14
Full genome-based characterization of G4P[6] rotavirus strains from diarrheic patients in Thailand: Evidence for independent porcine-to-human interspecies transmission events	13
Molecular interactions of plant viral satellites	13
SARS coronavirus outbreaks past and present—a comparative analysis of SARS-CoV-2 and its predecessors	13
Phylodynamics of G4P[8] and G2P[4] strains of rotavirus A isolated in Russia in 2017 based on full-genome analyses	12
Isolation and characterization of new Puumala orthohantavirus strains from Germany	11
Host proviral and antiviral factors for SARS-CoV-2	11
A potent enzybiotic against methicillin-resistant Staphylococcus aureus	11
Deciphering transmission dynamics and spillover of avian influenza viruses from avian species to swine populations globally	10
Identification of a reptile lyssavirus in Anolis allogus provided novel insights into lyssavirus evolution	10
Whole genome sequencing and phylogenetic classification of Tunisian SARS-CoV-2 strains from patients of the Military Hospital in Tunis	10
Genome characterization of fig umbra-like virus	10
Evidence for zoonotic transmission of species A rotavirus from goat and cattle in nomadic herds in Morocco, 2012–2014	10
Genomic characterization of a novel bovine papillomavirus type 28	10
Occurrence of a substitution or deletion of SARS-CoV-2 spike amino acid 677 in various lineages in Marseille, France	9
Distinct interferon response in bat and other mammalian cell lines infected with Pteropine orthoreovirus	9
Overexpression of m6A-factors METTL3, ALKBH5, and YTHDC1 alters HPV16 mRNA splicing	9

Peste des petits ruminants virus non-structural C protein inhibits the induction of interferon-β by potentially interacting with MAVS and RIG-I	9
Rapid decline of Zika virus NS1 antigen-specific antibody responses, northeastern Brazil	9
First molecular characterization of avian paramyxovirus-1 (Newcastle disease virus) in Botswana	9
Analysis of viruses present in urine from patients with interstitial cystitis	8
Development and application of reverse genetic technology for the influenza virus	8
Characterization of yam mosaic viruses from Brazil reveals a new phylogenetic group and possible incursion from the African continent	8
Identification and whole-genome characterization of a novel Porcine Circovirus 3 subtype b strain from swine populations in Vietnam	8
Geographically distant isolates of the persistent southern tomato virus (STV) show very low genetic diversity in the putative coat protein gene	7
Alternative antiviral approaches to combat influenza A virus	7
Phylogenetic and diversity analyses revealed that leek yellow stripe virus population consists of three types: S, L, and N	7
Full-length genome characterization of a novel alphapartitivirus detected in the ectomycorrhizal fungus Hygrophorus penarioides	7
Non-structural proteins of bovine viral diarrhea virus	7
Genome characterization of parsley severe stunt-associated virus in Iran	7
Date palm virus A: first plant virus found in date palm trees	6
Analysis of HBsAg mutations in the 25 years after the implementation of the hepatitis B vaccination plan in China	6
A novel ampelovirus associated with mealybug wilt of pineapple (Ananas comosus)	6
Duck sewage source coliphage P762 can lyse STEC and APEC	6
Viruses of endophytic and pathogenic forest fungi	6
Comparison of two Turnip mosaic virus P1 proteins in their ability to co-localize with the Arabidopsis thaliana G3BP-2 protein	6
Detection of mink astrovirus in Poland and further phylogenetic comparison with other European and Canadian astroviruses	6
The characteristics and genome analysis of vB_ApiP_XC38, a novel phage infecting Acinetobacter pittii	6
Prophylactic strategies to control chikungunya virus infection	6
The N-terminal cysteine protease domain of rice stripe tenuivirus Pc1 possesses deubiquitinating enzyme activity	6
Genetic sequence changes related to the attenuation of avian infectious bronchitis virus strain TW2575/98	6
Principles and practice of virus induced gene silencing for functional genomics in plants	6
Unusual mono-reassortant of a Wa-like G1P[8] species A rotavirus containing a DS-1-like (genotype 2) NSP4 gene	5
Diversity of mycoviruses in edible fungi	5
A novel one-step amplification refractory mutation system PCR (ARMS-PCR) for differentiation of canine parvovirus-2 variants	5
Full-genome characterization of a novel Felis catus papillomavirus 4 subtype identified in a cutaneous squamous cell carcinoma of a domestic cat	5
Variations in the NSP4 gene of the type 2 porcine reproductive and respiratory syndrome virus isolated in China from 1996 to 2021	5
Temporal landscape of mutational frequencies in SARS-CoV-2 genomes of Bangladesh: possible implications from the ongoing outbreak in Bangladesh	5
Variability of E2 protein-coding sequences of bovine viral diarrhea virus in Polish cattle	5
The Rep and C1 of Beet curly top Iran virus represent pathogenicity factors and induce hypersensitive response in Nicotiana benthamiana plants	5
Muramidase, nuclease, or hypothetical protein genes intervene between paired genes encoding DNA packaging terminase and portal proteins in Wolbachia phages and prophages	5
Development of a dual-labeled, hydrolysis probe-based, real-time quantitative PCR assay for detection of both genotypes of duck circovirus-1 (DuCV-1) and DuCV-2	5
A review on structural genomics approach applied for drug discovery against three vector-borne viral diseases: Dengue, Chikungunya and Zika	5
Genomic diversity and recombination of Seneca Valley viruses emerged in pig herds in Guangdong Province during 2019	5
Characterization of a ToMV isolate overcoming Tm-22 resistance gene in tomato	5
First molecular identification of porcine circovirus-like agents in dogs and cats in China	5
Genetic characterisation of the influenza viruses circulating in Bulgaria during the 2019–2020 winter season	5
A phylogenetic study of new rabies virus strains in different regions of Iran	5
Attenuated African swine fever virus through serial passaging of viruses in cell culture: a brief review on the knowledge gathered during 60 years of research	5
Isolation and genetic characterization of SARS-CoV-2 from Indian patients in a single family without H/O travel abroad	5
Profiling of alternative polyadenylation and gene expression in PEDV-infected IPEC-J2 cells	4
Complete genomic sequences and comparative analysis of two Orf virus isolates from Guizhou Province and Jilin Province, China	4
Identification and validation of ferroptosis-related genes in patients infected with dengue virus: implication in the pathogenesis of DENV	4
Molecular characteristics and pathogenicity of an equid alphaherpesvirus 1 strain isolated in China	4
Dissection of two drug-targeted regions of Hepatitis C virus subtype 4a infecting Egyptian patients	4
First complete genome sequence of Asia-4 lineage of canine distemper virus in China	4
Interaction between Translocation-associated membrane protein 1 and σC protein of novel duck reovirus controls virus infectivity	4

Structure and function of the parvoviral NS1 protein: a review	4
Complete genome sequences of infectious spleen and kidney necrosis virus isolated from farmed albino rainbow sharks Epalzeorhynchos frenatum in the United States	4
Genetic and antigenic characterization of influenza A/H5N1 viruses isolated from patients in Indonesia, 2008–2015	4
Effect of viral DNA methylation on expression of hepatitis B virus proteins depends on the virus genotype	4
Geographical distribution, genetic studies and vector transmission of alfalfa enamovirus-1 infecting alfalfa crop in Argentina	4
Isolation and characterization of a novel Escherichia coli phage Kayfunavirus ZH4	4
Subcellular localization of the porcine deltacoronavirus nucleocapsid protein	4
Increased viral read counts and metagenomic full genome characterization of porcine astrovirus 4 and Posavirus 1 in sows in a swine farm with unexplained neonatal piglet diarrhea	4
An increase in prevalence of recombinant GII.3[P12] norovirus in sporadic acute diarrhea in children in Nizhny Novgorod, Russia, 2018–2021	4
Construction of SARS-CoV-2 spike-pseudotyped retroviral vector inducing syncytia formation	4
Metagenomic sequencing determines complete infectious bronchitis virus (avian Gammacoronavirus) vaccine strain genomes and associated viromes in chicken clinical samples	4
Identification of recombination in novel goose parvovirus isolated from domesticated Jing-Xi partridge ducks in South China	4
Extensive ITR expansion of the 2022 Mpox virus genome through gene duplication and gene loss	4
First detection and complete genome analysis of the Lyon IARC polyomavirus in China from samples of diarrheic cats	4
Epstein–Barr virus miR-BART4-3p regulates cell proliferation, apoptosis, and migration by targeting AXL in gastric carcinoma	4
A highly virulent canine distemper virus strain isolated from vaccinated mink in China	4
Phylogenetic and evolutionary analysis of foot-and-mouth disease virus A/ASIA/Sea-97 lineage	4
CHIKV strains Brazil (wt) and Ross (lab-adapted) differ with regard to cell host range and antiviral sensitivity and show CPE in human glioblastoma cell lines U138 and U251	4
Natural intertypic and intratypic recombinants of enterovirus 71 from mainland China during 2009–2018: a complete genome analysis	4
Molecular detection of monkeypox and related viruses: challenges and opportunities	4
Isolation and phylogenomic analysis of two Senecavirus A isolates in Sichuan Province, 2018	3
Co-infection of a novel fusagravirus and a partitivirus in a Korean isolate of Rosellinia necatrix KACC40168	3
Mass spectrometry-based proteomic analysis of potential infectious bursal disease virus VP3-interacting proteins in chicken embryo fibroblasts cells	3
Drug-resistant and immune-escape hepatitis B virus mutants, occult hepatitis B infection and coinfections in public hospital patients from Argentina	3
Identification of infectious spleen and kidney necrosis virus (ISKNV)-encoded microRNAs	3
Diversity of viroids infecting grapevines in the South African Vitis germplasm collection	3
The emergence of novel Iranian variants in sheeppox and goatpox viral envelope proteins with remarkably altered putative binding affinities with the host receptor	3
Genetic and antigenic characterization of H5 and H7 avian influenza viruses isolated from migratory waterfowl in Mongolia from 2017 to 2019	3
H3K4me3 histone modification in baculovirus-infected silkworm cells	3
Tomato yellow vein streak virus and Tomato golden vein virus: a reappraisal of the classification status of two South American Begomovirus species based upon genome–wide pairwise identity of multiple	3
Transcriptional programs of infectious spleen and kidney necrosis virus (ISKNV) in vitro and in vivo	3
The Citrus yellow mosaic badnavirus ORFI functions as a RNA-silencing suppressor	3
Enzootic nasal tumor virus type 2 envelope of goats acts as a retroviral oncogene in cell transformation	3
First identification and genomic characterization of equine hepacivirus sub-type 3 strain in China	3
Identification and genomic characterization of emerging CRESS DNA viruses in thoroughbred horses in China	3
Interaction of influenza A virus NS1 and cytoskeleton scaffolding protein α-actinin 4	3
Investigation of canine chaphamaparvovirus, canine bufavirus, and canine adenovirus in dogs with diarrhea: First report of novel canine bufavirus in Turkey	3
An antiviral drug-resistant mutant of hepatitis B virus with high replication capacity in association with a large in-frame deletion in the preS1 region of viral surface gene	3
Activating transcription factor 3 mediates apoptotic functions through a p53-independent pathway in human papillomavirus 18 infected HeLa cells	3
Eukaryotic initiating factor eIF4E is targeted by EBV-encoded miR-BART11-3p and regulates cell cycle and apoptosis in EBV-associated gastric carcinoma	3
Characterization of H3 subtype avian influenza viruses isolated from poultry in Vietnam	3
Co-circulation of genotypes XIV.2 and XVIII.2 of avian paramyxovirus-1 (Newcastle disease virus) in backyard poultry in Niger	3
Identification of a novel bovine copiparvovirus in pooled fetal bovine serum	3
Molecular epidemiology of respiratory syncytial virus among children and adults in India 2016 to 2018	3
Molecular characterization of rabies viruses from two western provinces of the Democratic Republic of the Congo (2008–2017)	3
Effects of β-HPV on DNA damage response pathways to drive carcinogenesis: a review	3
Integrative analysis of microRNA and mRNA expression profiles in MARC-145 cells infected with PRRSV	3
Three new mycoviruses identified in the apple replant disease (ARD)-associated fungus Rugonectria rugulosa	3
Phylogenetic analysis of porcine reproductive and respiratory syndrome virus in Vietnam, 2021	3
The interplay of plant hormonal pathways and geminiviral proteins: partners in disease development	3
Isolation, characterization, and genomic analysis of vB_PaeS_TUMS_P81, a lytic bacteriophage against Pseudomonas aeruginosa	3
One-step SYBR green-based real-time RT-PCR assay for detection of foot-and-mouth disease virus circulating in India	3
Giant virus-related sequences in the 5300-year-old Ötzi mummy metagenome	2
Isolation and characterization of a novel lytic bacteriophage vB_Efm_LG62 infecting Enterococcus faecium	2
Is COVID-19 severity associated with telomere length? A systematic review and meta-analysis	2
The complete genome sequence of an alphabaculovirus from the brown tussock moth, Olene mendosa Hübner, expands our knowledge of lymantriine baculovirus diversity and evolution	2
Removal of 3C protease from the 3ABC improves expression, solubility, and purification of the recombinant 3AB of foot-and-mouth disease virus	2
Diversity of tomato-infecting begomoviruses and spatiotemporal dynamics of an endemic viral species of the Brazilian Atlantic rain forest biome	2
Whole genome sequence analysis of bacteriophage P1 that infects the Lactobacillus plantarum	2
Complete genome sequence of malva-associated soymovirus 1: a novel virus infecting common mallow	2
A dominant internal gene cassette of high pathogenicity avian influenza H7N9 virus raised since 2018	2
Genotypes of rhinovirus detected among children in two communities of South-West Nigeria	2
Complete genome sequences of novel Berlinvirus and novel Certrevirus lytic for Pectobacterium sp. causing soft rot and black leg disease of potato	2
Isolation and characterization of the novel bacteriophage vB_SmaS_BUCT626 against Stenotrophomonas maltophilia	2
A genetically novel avian Hepatitis E virus in China	2
Characterization of the first Rubus yellow net virus genome from blackberry	2
The host cellular protein Ndufaf4 interacts with the vesicular stomatitis virus M protein and affects viral propagation	2
RHDV 3C protein antagonizes type I interferon signaling by cleaving interferon promoter stimulated 1 protein	2
Epstein–Barr virus infection controls the concentration of the intracellular antioxidant glutathione by upregulation of the glutamate transporter EAAT3 in tumor cells	2
Retrospective analysis of HIV-1 drug resistance mutations in Suzhou, China from 2009 to 2014	2
Genetic characterization of dengue virus from patients presenting multi-serotypic infections in the Northern West Bengal, India	2
Hantavirus Brno loanvirus is highly specific to the common noctule bat (Nyctalus noctula) and widespread in Central Europe	2
SOX9 negatively regulates the RLR antiviral signaling by targeting MAVS	2
Assessment of replication of bovine herpesvirus type 4 in human glioblastoma and breast cancer cells as a potential oncolytic virus	2
Analysis of host protein interactions in plant viruses: an in silico study using Sesbania mosaic virus	2
First detection of the occurrence and study of the genetic diversity of novel putative kirkoviruses in donkey in China	2
Reintroduction of highly pathogenic avian influenza A H7N9 virus in southwestern China	2
Orientation-dependent toxic effect of human papillomavirus type 33 long control region DNA in Escherichia coli cells	2
The arrival of highly pathogenic avian influenza viruses H5N8 in Iran through two windows, 2016	2
Phylogenetics of tobacco rattle virus isolates from potato (Solanum tuberosum L.) in the USA: a multi-gene approach to evolutionary lineage	2

Transcriptome sequencing of LMP2A-transfected gastric cancer cells identifies potential biomarkers in EBV-associated gastric cancer	2
A novel subgenotype I3 of hepatitis B virus in Guangxi, China: a 15-year follow-up study	2
Molecular characterization of non-polio enteroviruses isolated from children with acute flaccid paralysis in IRAN, 2015–2018	2
Whole genome sequencing and annotation of a lysogenic phage vB_EcoP_DE5 isolated from donkey-derived Escherichia coli	2
The lytic phase of Epstein–Barr virus plays an important role in tumorigenesis	2
Molecular characterization of poleroviruses isolated from oilseed rape in Greece	2
In vitro inhibitory effect of maraviroc on the association of the simian immunodeficiency virus envelope glycoprotein with CCR5	2
Zika virus infection induces expression of NRF2 and antioxidant systems in trophoblast cells	2
Sensitivity of two SARS-CoV-2 variants with spike protein mutations to neutralising antibodies	2
Potential reverse spillover of infectious bursal disease virus at the interface of commercial poultry and wild birds	2
Impact of genetic polymorphisms related to innate immune response on respiratory syncytial virus infection in children	2