APMIS

Papers
(The TQCC of APMIS is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 500 papers]. The publications cover those that have been published in the past four years, i.e., from 2019-12-01 to 2023-12-01.)
ArticleCitations
The environmental occurrence of Pseudomonas aeruginosa129
Gut microbiota in atherosclerosis: focus on trimethylamine N‐oxide73
Bacillus Calmette–Guérin immunotherapy for bladder cancer: a review of immunological aspects, clinical effects and BCG infections56
Epidemiology and role of Helicobacter pylori virulence factors in gastric cancer carcinogenesis49
Electronic reporting of diagnostic laboratory test results from all healthcare sectors is a cornerstone of national preparedness and control of COVID‐19 in Denmark46
Studies on viral pneumonia related to novel coronavirus SARS‐CoV‐2, SARS‐CoV, and MERS‐CoV: a literature review32
Could SARS‐CoV‐2 infection affect male fertility and sexuality?28
Merkel cell polyomavirus and non‐Merkel cell carcinomas: guilty or circumstantial evidence?26
The human microbiome in disease and pathology26
Bacterial signatures and their inflammatory potentials associated with prostate cancer23
Pandemics: past, present, future22
Intraductal carcinomas of the salivary glands: systematic review and classification of 93 published cases21
The inflammatory response to bone infection – a review based on animal models and human patients21
The Swedish public health response to COVID‐1920
Endemic Burkitt lymphoma – an aggressive childhood cancer linked to Plasmodium falciparum exposure, but not to exposure to other malaria parasites19
Human papillomavirus and urinary bladder cancer revisited18
Current and novel diagnostics for orthopedic implant biofilm infections: a review14
Prevention of nosocomial Acinetobacter baumannii infections with a conserved immunogenic fimbrial protein14
Prognostic role of TSPAN1, KIAA1324 and ESRP1 in prostate cancer13
Quercetin inhibits carbapenemase and efflux pump activities among carbapenem‐resistant Gram‐negative bacteria13
Interleukin‐9‐secreting CD4+ T cells regulate CD8+ T cells cytotoxicity in patients with acute coronary syndromes13
Overview of rearing and testing conditions and a guide for optimizing Galleria mellonella breeding and use in the laboratory for scientific purposes12
Cancer during HIV infection12
The impact of the gut microbiota on prognosis after surgery for colorectal cancer – a systematic review and meta‐analysis12
Genomic epidemiology and antimicrobial resistance determinants of Neisseria gonorrhoeae isolates from Ukraine, 2013–201811
The impact of mental models on the treatment and research of chronic infections due to biofilms11
Neuroinvasive potential of SARS‐CoV2 with neuroradiological and neuropathological findings: is the brain a target or a victim?11
Can vancomycin lock therapy extend the retention time of infected long‐term catheters?11
Human skin microbiota in health and disease11
Pathogen‐associated molecular patterns and extracellular Hsp70 interplay in NLRP3 inflammasome activation in monocytic and bronchial epithelial cellular models of COPD exacerbations10
The COVID‐19 pandemic: key considerations for the epidemic and its control10
The effect of calcitriol and all‐trans retinoic acid on T‐bet, IFN‐γ, GATA3 and IL‐4 genes expression in experimental autoimmune encephalomyelitis10
Frequency and coexistence of KRAS, NRAS, BRAF and PIK3CA mutations and occurrence of MMR deficiency in Danish colorectal cancer patients10
The gut microbiota can orchestrate the signaling pathways in colorectal cancer10
Evaluation of Pseudomonas aeruginosa pathogenesis and therapeutics in military‐relevant animal infection models10
USP7, negatively regulated by miR‐409‐5p, aggravates hypoxia‐induced cardiomyocyte injury10
The first wide‐scale drug repurposing screen using the Prestwick Chemical Library (1200 bioactive molecules) against Neisseria gonorrhoeae identifies high in vitro activity of auranofin 10
Tumour angiogenesis and c‐Met pathway activation – implications in breast cancer9
The contribution of HERV‐E clone 4‐1 and other HERV‐E members to the pathogenesis of rheumatic autoimmune diseases9
VGLL4 with low YAP expression is associated with favorable prognosis in colorectal cancer9
Aquaporin‐1 in breast cancer9
The discovery of bacterial biofilm in patients with muscle invasive bladder cancer9
Genetic diversity and antimicrobial resistance of Staphylococcus aureus from recurrent tonsillitis in children9
Accuracy of anterior nasal swab rapid antigen tests compared with RT‐PCR for massive SARS‐CoV‐2 screening in low prevalence population9
Thyroid cancer metastasis is associated with an overabundance of defective follicular helper T cells9
Immunotyping in tubo‐ovarian high‐grade serous carcinoma by PD‐L1 and CD8+ T‐lymphocytes predicts disease‐free survival9
Comparative evaluation of CLIA and EIA for Quantiferon‐TB Gold Plus8
Novel human in vitro vegetation simulation model for infective endocarditis8
SARS‐CoV‐2 spike mRNA vaccine sequences circulate in blood up to 28 days after COVID‐19 vaccination8
Biopsy quality is essential for preoperative prognostication in oral tongue cancer8
SARS‐CoV‐2 superspreading in cities vs the countryside8
Salivary gland tumours in Iceland 1986–2015: a nationwide epidemiological analysis over a 30‐year time period8
Aquaporins in pancreatic ductal adenocarcinoma7
Regulation of the expression of human endogenous retroviruses: elements in fetal development and a possible role in the development of cancer and neurological diseases7
Dual role of B7‐H6 as a novel prognostic marker in hepatocellular carcinoma7
Serum metabolomic profiling reveals important difference between infants with and without subsequent recurrent wheezing in later childhood after RSV bronchiolitis7
Canola oilseed‐ and Escherichia coli‐ derived hepatitis C virus (HCV) core proteins adjuvanted with oil bodies, induced robust Th1‐oriented immune responses in immunized mice7
Clinicopathologic features and prognostic factors in patients with renal cell carcinoma with sarcomatoid differentiation7
Our current clinical understanding of Candida biofilms: where are we two decades on?7
Transcriptomic fingerprint of bacterial infection in lower extremity ulcers7
Aquaporin‐5 in breast cancer7
Analyses of ABO blood groups with susceptibility and symptomatic variations of COVID‐19 infection, a questionnaire‐based survey7
Zoonotic and reverse zoonotic transmission of viruses between humans and pigs7
EZH2 expression is dependent on MYC and TP53 regulation in diffuse large B‐cell lymphoma7
Prevalence of paediatric hyperinflammatory conditions in paediatric and adolescent hospitalized COVID‐19 patients: a systematic review and meta‐analysis7
Role of IL‐22 in homeostasis and diseases of the skin6
Toll‐like receptor 5 and 8 in hepatocellular carcinoma6
Evaluation of analytical accuracy of HER2 status in patients with breast cancer6
The Hammer vs Mitigation—A comparative retrospective register study of the Swedish and Danish national responses to the COVID‐19 pandemic in 20206
Pertussis seroprevalence among adults of reproductive age (20–39 years) in fourteen European countries6
Reduced frequency of T helper 17 and T helper 1 cells and their association with critical coronavirus disease 20196
Altered gut microbiota in hepatocellular carcinoma: Insights into the pathogenic mechanism and preclinical to clinical findings6
Human rhinovirus 16 induces antiviral and inflammatory response in the human vascular endothelium6
Association of toll‐like receptor 10 polymorphisms with pediatric pneumococcal meningitis6
The panel of syntaxin 1 and insulinoma‐associated protein 1 outperforms classic neuroendocrine markers in pulmonary neuroendocrine neoplasms6
Automated assessment of Ki‐67 proliferation index in neuroendocrine tumors by deep learning6
Composition and plasticity of triple‐negative breast carcinoma‐infiltrating regulatory T cells5
Putative anoikis‐resistant subpopulations in colorectal carcinoma: a marker of adverse prognosis5
Evaluation of a semi‐automated Seegene PCR workflow with MTB, MDR, and NTM detection for rapid screening of tuberculosis in a low‐prevalence setting5
PD‐L1 immunohistochemistry: Clones, cutoffs, and controversies5
Nuclear overexpression levels of MAGE‐A3 predict poor prognosis in patients with prostate cancer5
Meta‐analysis of caries microbiome studies can improve upon disease prediction outcomes5
Host‐microbe metatranscriptome reveals differences between acute and chronic infections in diabetes‐related foot ulcers5
Expression and prognostic utility of SSX2IP in patients with nasopharyngeal carcinoma5
Serum ACE as a prognostic biomarker in COVID‐19: a case series5
IgG4‐positive plasma cells in Hashimoto thyroiditis: IgG4‐related disease or inflammation‐related IgG4‐positivity?5
The Inequality of Females in Bladder Cancer5
BUB1 predicts poor prognosis and immune status in liver hepatocellular carcinoma5
Do mast cells contribute to the continued survival of vertebrates?5
Diagnostics with clinical microbiome‐based identification of microorganisms in patients with brain abscesses—a prospective cohort study5
Implant‐associated osteomyelitis: Development, characterisation, and application of a porcine model5
High prevalence of pharyngeal bacterial pathogens among healthy adolescents and young adults4
Identification of microorganisms directly from blood culture bottles with polymicrobial growth: comparison of FilmArray and direct MALDI‐TOF MS4
Performance analysis of high‐throughput HPV testing on three automated workflows4
Molecular characterization of human adenoviruses associated with respiratory infection in Turkey4
Prognostic implications of the tumor immune microenvironment and immune checkpoint pathway in primary central nervous system diffuse large B‐cell lymphoma in the North Indian population4
A possible interplay between HR‐HPV and stemness in tumor development: an in vivo investigation of CD133 as a putative marker of cancer stem cell in HPV18‐infected KB cell line4
Dynamics of a Staphylococcus aureus infective endocarditis simulation model4
A metatranscriptomic approach to explore longitudinal tissue specimens from non‐healing diabetes related foot ulcers4
spoT‐mediated stringent response influences environmental and nutritional stress tolerance, biofilm formation and antimicrobial resistance in Klebsiella pneumoniae4
Malignant peripheral nerve sheath tumors arising from schwannomas: case series and literature review4
Two cases of tick‐borne transmitted tularemia on Southern Zealand, Denmark4
Performance of PCR‐based syndromic testing compared to bacterial culture in patients with suspected pneumonia applying microscopy for quality assessment4
PCSK2 expression in neuroendocrine tumors points to a midgut, pulmonary, or pheochromocytoma–paraganglioma origin4
Hierarchical clustering of PI3K and MAPK pathway proteins in breast cancer intrinsic subtypes4
Prognostic significance of atypical mitotic figures in smooth muscle tumors of uncertain malignant potential (STUMP) of the uterus and uterine adnexa4
High YAP and TEAD4 immunolabelings are associated with poor prognosis in patients with gallbladder cancer4
Animal models of chronic and recurrent Pseudomonas aeruginosa lung infection: significance of macrolide treatment4
Acinetobacter baumannii: insights towards a comprehensive approach for the prevention of outbreaks in health‐care facilities4
Reliability of Ki67 visual scoring app compared to eyeball estimate and digital image analysis and its prognostic significance in hormone receptor‐positive breast cancer4
Biomarkers for iron metabolism among patients hospitalized with community‐acquired pneumonia caused by infection with SARS‐CoV‐2, bacteria, and influenza4
Highly sensitive duplex MSI test and BAT40 germline polymorphism4
Cranberry‐lingonberry juice affects the gut and urinary microbiome in children ‐ a randomized controlled trial4
A Chlamydia trachomatis 23S rRNA G1523A variant escaping detection in the Aptima Combo 2 assay (Hologic) was widespread across Denmark in July–September 20194
Sclerosing epithelioid fibrosarcoma: in‐depth review of a genetically heterogeneous tumor4
Weight‐based cefuroxime dosing provides comparable orthopedic target tissue concentrations between weight groups – a microdialysis porcine study4
Potential impact of the COVID‐19 pandemic on the national and regional incidence, epidemiology and diagnostic testing of chlamydia and gonorrhoea in Sweden, 20204
Molecular and phenotypical investigation of ciprofloxacin resistance among Campylobacter jejuni strains of human origin: high prevalence of resistance in Turkey4
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