APMIS

Article	Citations
Issue Information	50
APMIS 2022 focus issue on human microbiome in disease and pathology	46
Routine use of MSI testing in colorectal cancer using a proposed algorithm	42
Toll‐like receptors 3, 7, 8, and 9 in gastric cancer	34
Risk of orthopaedic implant infection during bacteraemia	29
Performance of automated antimicrobial susceptibility testing for the detection of antimicrobial resistance in gram‐negative bacteria: a NordicAST study	26
Construction of a Predictive Modelbased on Tertiary Lymphoid Structures on the Survival of Patients With Gastrointestinal Malignant Tumors	25
The Ability of NEWS2 to Detect Sepsis in Adult Patients With Positive Blood Cultures	24
Comparative miRNA Expression Profiling Reveals Candidates Involved in Prostate Cancer Radioresistance	23
Immune responses to mRNA‐based vaccines given as a third COVID‐19 vaccine dose in people living with HIV—a literature review	22
Fast processing of gynecologic cancer tissue in Danish Cancer Biobank makes them well‐suited for biomarker studies	22
Role of Systemic Inflammatory Markers in the Differential Diagnosis of Organizing Pneumonia and Lung Cancer	21
Bacterial invasion of the submicron osteocyte lacuna–canaliculi network (OLCN): a part of osteomyelitis disease biology	20
Issue Information	19
Bacterial aerobic respiration is a major consumer of oxygen in sputum from patients with acute lower respiratory tract infection	19
Dendritic Cell Therapy in Chronic Viral Infections: Current Applications, Challenges, and Future Perspectives	15
MUC1 in Colorectal Carcinoma: Association With Prognosis and Putative Anoikis‐Resistant Structures	15
Anti‐PD‐L1 chimeric antigen receptor natural killer cell: Characterization and functional analysis	15
Lactams Exhibit Potent Antifungal Activity Against Monospecies and Multispecies Interkingdom Biofilms on a Novel Hydrogel Skin Model	14
Estimated incidence of symptomatic Lyme borreliosis cases in five southern coastal counties in Norway, 2022	14
Issue Information	13
Effects of changes in SHP2 expression on liver fibrosis by influencing the apoptosis of hepatic stellate cells	13
Bacteriophage therapy and infective endocarditis – is it realistic?	13
Evaluation of Epithelial Integrity in Human Precision‐Cut Kidney Slices	13
Association of TLR4 polymorphisms (Asp299Gly and Thr399Ile) with sepsis: a meta‐analysis and trial sequence analysis	12

Functional Stability of Tetracycline: Practical Information for Its Use in Bacterial Selection	12
Dysbiosis and Dyslipidemia: Unraveling the Microbiome's Role in Lipid Metabolism and Therapeutic Potential	12
Detection of Mycobacterium tuberculosis in Ziehl–Neelsen Stained Sputum Smear Specimens Using Deep Learning Techniques	12
Dynamic distribution of systemically administered antibiotics in orthopeadically relevant target tissues and settings	12
Short communication: dog bite and back pain	12
Association of Toll‐like receptor 2 rs111200466 polymorphism with low serum levels of IL‐33 in early childhood	12
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Issue Information	10
Understanding the biofilm development of Acinetobacter baumannii and novel strategies to combat infection	10
Cell‐Type‐Specific Expression of Human Endogenous Retroviruses and Epigenetic Regulators in Human Peripheral Blood	10
Tunneled Catheter‐Related Bloodstream Infections in Chronic Hemodialysis Patients: Frequency, Risk Factors, and Outcomes—A 10‐Year Analysis	9
Characteristics of de novo cancer in liver transplant recipients	9
Inhibition of mi R ‐222‐3p Alleviates Acute Pancreatitis by Negatively Regulating the Expression of SIRT	9
Saliva and Anterior Nasal Samples for Detecting Respiratory Viruses in Children	9
Hemangioblastoma of the Kidney—A Comprehensive Clinical, Pathological, and Genetic Analysis of Four Cases	9
LncRNA HOXC ‐ AS1 Promotes Tumor Progression via miR ‐876‐3p/	9
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The Human Threat From West Nile Virus and Usutu Virus in a Changing Climate	9
Exploring the immune‐modulating properties of boswellic acid in experimental autoimmune encephalomyelitis	9
Circulating miR‐378a‐3p Screens End‐Stage Renal Disease Patients, Predicts the Occurrence of MACEs, and Regulates Vascular Calcification via Targeting SULF1	9
Importance of C24:2 sulfatide	9
High seroprevalence of SARS‐CoV‐2 antibodies in healthcare workers in COVID‐19 wards indicates an occupational hazard—a prospective cohort study during the first year of the	8
Clinical characteristics and risk factors of connective tissue disease complicated with bronchiectasis and pulmonary infection	8
Clinical Characteristics and Laboratory Diagnoses of Pediatric Patients Hospitalized During an Outbreak of Mycoplasma pneumoniae	8
Issue Information	8
The value of umbilical cord insertion site sampling in detecting maternal and/or fetal inflammatory response	8
Prevalence, molecular markers, and outcome of bronchial squamous carcinoma in situ in high‐risk subjects	8
Biomarkers for iron metabolism among patients hospitalized with community‐acquired pneumonia caused by infection with SARS‐CoV‐2, bacteria, and influenza	8
No Bacterial Biomass Detected in Tissue From Patients With Ovarian Cancer and Serous Tubal Intraepithelial Carcinomas Using 16S rDNA Sequencing	8
Pan‐Cancer Analysis Reveals SKA3 as a Potential Diagnostic and Prognostic Biomarker	7
Beyond Frozen Section: Evolving Methodologies for Intraoperative Assessment of Surgical Margins in Breast Conservation Surgery	7
Prognostic Significance of Immunohistochemical Surrogate Molecular Sub‐Typing of Small Cell Lung Carcinoma	7
Incidence of Cefotaxime‐Resistant Haemophilus influenzae Is Linked to Regional Consumption of Oral	7
Glycemic Variability and Diabetic Events in Hospitalized Patients With COVID‐19 Treated With Dexamethasone: An Observational Cohort Study	7
Immunohistochemical detection of double‐stranded RNA in formalin‐fixed paraffin‐embedded tissue	7
Antimicrobial susceptibility testing of bone and joint pathogens using isothermal microcalorimetry	7
New contributions on chronic low back pain: disc infection or contaminated cultures?	7
Inflammatory mediators in bacterial vaginosis: The role of cytokines	6
Our current clinical understanding of Candida biofilms: where are we two decades on?	6
Issue Information	6
Fungal positivity and other laboratory parameters in HIV‐ and non‐HIV‐related cryptococcal meningitis patients upon antifungal treatment	6
“Fertile” Mutations in SARS ‐ CoV ‐2 RNA More F	6
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RETRACTION : Molecular Diversity of the Planctomycetes in the Human Gut Microbiota in France and Senegal	6
Microbiological Analysis of Lower Airway Samples: Does It Influence the Outcome in Patients With Community‐Acquired Pneumonia?	6
Detection of Anti‐ CMV TCR CDR3s via Blood and Tumor Exome Files Correlates With Increased Survival for Stomach Adenocarcinoma and Soft Tissue Sarcom	6
Evaluating the Efficacy of Capreomycin and Levofloxacin Combination Therapy in Multidrug‐Resistant Tuberculosis Patients	6
Viral intruders in the heart: A review of RNA viruses and their role in cardiac disorders	6
STK11 mutation affects the killing effect of NK cells to promote the progression of lung adenocarcinoma	6
How to Write a Pathology Research Paper—Basic Principles and Beyond—A Primer for Residents	5

Undifferentiated–dedifferentiated endometrial carcinoma; the reappearance of an old friend with insights into the new data	5
Probiotics in Women's Health: Mechanisms, Benefits, and Potential Applications for Preventing Bacterial Vaginosis and Sexually Transmitted Diseases in Sexual Health Products	5
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Staining pattern of specific and cross‐reacting Melan‐A antibodies: A comparative study on 15,840 samples from 133 human tumor types	5
Prevalence and Co‐Detection Rates of SARS‐CoV‐2, Influenza, and Respiratory Syncytial Virus: A Retrospective Analysis	5
Prevalence and characteristics of 11 potentially diarrhoeagenic microbes in asymptomatic individuals in Norway, 2015–2020	5
Issue Information	5
Forssman and the staphylococcal hemolysins	5
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Molecular epidemiology of community‐ and hospital‐associated Clostridioides difficile infections in Jönköping, Sweden, October 2017 – March 2018	5
Impact of Subcarinal Angle on Parenchymal Involvement and Disease Severity in COVID‐19 Pneumonia: A Retrospective Analysis	5
Dynamics of endemic human coronavirus and SARS‐CoV‐2 in a hospital of Madrid, Spain. Retrospective study from June 2020 to July 2023	5
Candida albicans , HIV And Immune System in a Holobiont Perspective	5
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Pathophysiological microenvironments in oral candidiasis	4
Issue Information	4
Systematic Morphological Assesment of the Ascending Aorta Dissection: Application of Cardiovascular Pathology Consensus Statement in Tertiary Care Hospital in Finland	4
Antimicrobial resistance of Pseudomonas aeruginosa in a cystic fibrosis population after introduction of a novel cephalosporin/β‐lactamase inhibitor combination	4
Differences in gene expression despite identical histomorphology in sinonasal intestinal‐type adenocarcinoma and metastases from colorectal adenocarcinoma	4
Influence of Nutritional Conditions on Coexistence of Pseudomonas aeruginosa and Staphylococcus aureus in	4
Mapping bacterial biofilm on explanted orthopedic hardware: An analysis of 14 consecutive cases	4
Inter‐observer agreement of tumor infiltrating lymphocytes in primary HER2‐positive breast cancer and correlation between tissue microarray and full tumor‐sections	4
Ex Vivo Goat Corneal Model for Investigating Host Immune Responses and Antifungal Drug Testing in Fusarium Keratitis	4
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Emergence and fixation of SARS‐CoV‐2 minority variants in a chronically infected patient receiving therapy in Denmark	4
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Cuminaldehyde Potentiates the Antimicrobial and Antibiofilm Activity of Vancomycin: A Biochemical Study to Manage the Threats of Methicillin Resistant Staphylococcus aureus	4
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Antibiotic resistances of Pseudomonas aeruginosa and Acinetobacter baumannii in urine cultures: experience in a hospital of Southeast Spain	4
Antifungal drug resistance in Candida: a special emphasis on amphotericin B	4
Circ_0006873 suppresses the osteogenic differentiation of human‐derived mesenchymal stem cells through mediating miR‐20a/SMURF2 axis in vitro	4
Editorial for PMI Journal 100‐Years Anniversary Focus Issue	4
A novel fully human recombinant antibody neutralizing α‐hemolysin of Staphylococcus aureus	4
Issue Information	4
Understanding Heterogeneity and Tolerance of Dual Candida albicans–Staphylococcus aureus Biofilms	4
Azole resistance in Candida auris: mechanisms and combinatorial therapy	4
Early Human Neutrophil Response to Different Morphotypes of Candida albicans Compared to Bacterial Pathogens	3
RE: Aetiological profile of acute encephalitis syndrome in Assam, India, during a 4‐year period from 2019 to 2022	3
Historical concepts and contemporary perspectives of dental caries—a tribute to Henrik Dam (1895–1976)	3
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Mesalazine Suppresses Colorectal Cancer Liver Metastasis via the HDAC3 /Wnt/ β ‐Catenin Axis Through D	3
The microbiome in the pathogenesis of lung cancer	3
Large‐Scale Study Comparing Analytical and Diagnostic Quality of Three HPV Self‐Sampling Devices for At‐Home Cervical Cancer Screening	3
Human Coronavirus 229E May Infect Human Lung Vascular Endothelium and Induce Delayed Inflammatory and Antiviral Response	3
No evidence of increased anti‐M3 muscarinic acetylcholine receptor autoantibodies in SSA‐positive connective tissue disease patients	3
Tagitinin C‐Rich Extract From Tithonia diversifolia (hemsl.) A. Gray Exerts Activity Against Pathogenic Bacteria and Biofilms	3
Issue Information	3
Nanomaterials and Candida auris : A Systematic Review of Emerging Strategies	3
Infectious native aortic aneurysm with negative blood cultures: do not forget the pneumococcal urinary antigen test!	3
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Next‐Gen Biofilm Control: Gene Editing and Computational Approaches	3
An insight on the eye bacterial microbiota and its role on dry eye disease	3
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In Vitro Activity of Antifungals in Combination With Meropenem or Daptomycin Against Dual Candida albicans –Bacterial Biofilms	3
Identification of Metastasis‐Associated circRNA‐miRNA‐mRNA Network Reveals Novel Biomarkers and Therapy Strategies for Esophageal Cancer	3
Issue Information	3
Pathogenic Role of β‐Endo‐N‐Acetylglucosaminidase ( LytB ) in Streptococcus pneumoniae	3
In‐Silico Characterisation of Burkholderia pseudomallei K96243 Pathogenic Islands: Unveiling Novel Targets for Therapeutic	3
Humoral immune response of Galleria mellonella after mono‐ and co‐injection with Hypericum perforatum extract and Candida albicans	3
Correction to “The relevance of ERG immunoexpression intensity for prostatic adenocarcinoma in radical prostatectomy of 635 samples”	3
Issue Information	3
Compartment‐Specific miRNA Levels in Prostate Cancer: In Situ Profiling of Serum Biomarker Candidates	3
Rhinoviral Infection of the Human Lung Vascular Endothelium May Protect From the Secondary Infection With Rhinovirus RV‐16	3
Patients with tinea pedis and onychomycosis are more likely to use disinfectants when washing textiles than controls	3
Diarrhoea‐causing microorganisms are rare in adult patients undergoing diagnostic laparoscopy for suspected appendicitis: a prospective observational cohort study	3
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Histologic Distinction Between Clear Cell Sarcoma and Melanoma Using Supervised and Deep Learning	3
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Allicin Targets Carbapenemase and Efflux Pump Activity in Klebsiella pneumoniae to Mitigate Meropenem Resistance	3
Combination of Isoliquiritigenin and Vancomycin Alleviates Staphylococcus aureus‐Induced Bone Infection in Rats	3
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Do mast cells contribute to the continued survival of vertebrates?	3
Peer‐to‐peer validation of Ki‐67 scoring in a pathology quality circle as a tool to assess interobserver variability: are we better than we thought?	3
Screening the Tocriscreen™ bioactive compound library in search for inhibitors of Candida biofilm formation	3
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Diagnosis and Mechanism of miR ‐1224‐5p in Children With Mycoplasma pneumoniae	3

Tertiary lymphoid structures and gastric cancer prognosis	3
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In vitro determination of the susceptibility of Malassezia furfur biofilm to different commercially used antimicrobials	2
Understanding the Antifungal and Antibiofilm Potential of a Naturally Occurring Bacillus Lipopeptide	2
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Deep Learning‐Based Tumor Cell Classification in Lung Adenocarcinoma With a Case‐by‐Case Human‐in‐the‐Loop Approach	2
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Probiotic Potential of Lacticaseibacillus casei Isolated From Traditional Dairy Products and Its Hepatoprotective Effects in STZ	2
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Blocking coprophagy increases the levels of inflammation and depression in healthy mice as well as mice receiving fecal microbiota transplantation from disease model mice donors	2
Deciphering Morphological Spectrum, Stemness and PI3K/AKT/PTEN/MAPK Pathway Alterations in Metaplastic Breast Carcinoma	2
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Web‐grading—a tool to test personal grading of renal and prostate cancer	2
The expression of keratin 17 and p27 predicts clinical outcomes in colorectal cancer	2
Hsa‐Let‐7c‐3p Inhibits Retinoblastoma Cell Growth and Metastasis and Induces Pyroptosis by Targeting ARHGAP11A	2
Issue Information	2
Beta‐cell activity and development of Type 1 diabetes	2
Elevated expression of the AIM2 gene in response to Helicobacter pylori along with the decrease of NLRC4 inflammasome is associated with peptic ulcer development	2
miR ‐769‐5p as a Novel Biomarker and Functional Mediator in Alzheimer's Disease: Targeting CREB5	2
Interaction Between Epithelial‐Mesenchymal Transition and Tumor Microenvironment Biomarkers and Their Impact on the Prognosis of Oral Tongue Squamous Cell Carcinoma	2
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Examining the Role of Virulence Proteins From Pathogenic Anaerobes in the Initiation of Colorectal Cancer	2
Arthritis in Cystic Fibrosis—Comparison of a Single‐Center Cohort and Published Case Reports/Series and a Review of the Literature	2
Biofilm Associated Persistence and Drug Tolerance in Mycobacteria Within Host Microenvironments	2
Diagnostic and Promotes Fracture Healing Value of Deregulated miR ‐143‐3p in Patients With Osteoporotic Fractures	2
Rapid identification of SARS‐CoV‐2 variants using stable high‐frequency mutation sites	2
Ricinoleic Acid Potentiates Sodium Fluoride's Antibacterial Action Against Streptococcus mutans : A Synergistic Approach for Caries Control	2
HERC5: a comprehensive in silico analysis of its diagnostic, prognostic, and therapeutic potential in cancer	2
Role of Toll‐Like Receptors in Myeloid Neoplasms: Focuses on the Molecular Mechanisms and Clinical Impact on Myelodysplastic Syndromes, Acute Myeloid Leukemia, and Chronic Myeloid Leukemia	2
Celebrating a century of APMIS: a legacy of pathology, microbiology, and immunology	2
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Metabolic syndrome, soluble CD40L, and biomarkers of endothelial dysfunction in people living with HIV	2
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Immunohistochemical Classification of High‐Grade Pancreatic Intraepithelial Neoplasia and Ductal Cancerization in Pancreatic Ductal Adenocarcinoma Using p53, SMAD4	2
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Evaluation of Antibiofilm Efficacy of C‐Phycocyanin From Spirulina Species Against Candida albicans	2
Short communication: first case of bacteraemia caused by Dielma fastidiosa in a patient hospitalized with diverticulitis	2
Issue Information	2
Novel sampling technique maintaining the two‐dimensional organization of microbes during cultivation from chronic wounds: The Imprint method	2
Metagenomic Characterization of Biofilm and Suspended Microbial Communities in a Hybrid Algal Turf Scrubber‐Based Wastewater Treatment System	2
Fritz Kauffmann: innovator in microbial classification	1
Rationale and Design of the MIA Trial: A Proof‐of‐Concept Study of Minimally Invasive Autopsy in an Infectious Cause of Death in a Scandinavian	1
Fatty Acids and Benzene Derivatives Partitioned From Marine‐Derived Bacillus safensis: Novel Agents Against Methicillin‐Resistant Staphylococcus aureus	1
Enhancing PMMA Cements With Manually Added Antimicrobial Agents	1
The Role of Human Microbiota in Autoimmune Diseases: Exploring Dysbiosis and Mechanisms	1
Predicting the clinical efficacy of JAK inhibitor treatment for patients with rheumatoid arthritis based on Fas+ T cell subsets	1
Detection and characterization of HIV‐1 group O and HIV‐2 in the Central African Republic	1
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Antigen Specificity: A Fluctuating Aspect in the Development of Clinical Antibodies?	1
APMIS focus issue 2024—The microenvironment in human disease	1
Lymphocyte Suppression and Exhaustion, Conventional, and Accelerated	1
PD‐L1 expression and FGFR‐mutations among Danish patients diagnosed with metastatic urothelial carcinoma: A retrospective and descriptive study	1
Diagnostic performance of patient self‐collected oral swab (tongue and cheek) in comparison with healthcare worker‐collected nasopharyngeal swab for severe acute respiratory syndrome coronavirus‐2 det	1
Echinacoside attenuates Klebsiella pneumoniae‐induced pneumonia via inhibition of the TLR4/NF‐κB signaling	1
Human lung vascular endothelium may limit infection with HRV16viaIFN‐β‐dependent mechanisms	1
Tumor‐Associated Fusobacterium nucleatum and Aggressive Architectural Features in Stage	1
Cefepime/Enmetazobactam as a Carbapenem‐Sparing Alternative: Activity Against Extended‐Spectrum β‐Lactamase‐Producing Enterobacteria With and Without Carbapenemases in Southern Spain	1
Fourier‐transform infrared spectroscopy imaging is a useful adjunct to routine histopathology to identify failure of polyethylene inlays in revision total hip arthroplasty	1
Goblet Cell Adenocarcinoma of Appendix‐ Clinicopathological Analysis of a Rare Neoplasm—A Tertiary Care Center Study	1
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Evaluation of transcription factors and cytokine expressions of T‐cell subsets in CD19 deficiency and their possible relationship with autoimmune disease	1
Bile Acids and Bile Acid Metabolites in the Activation and Inhibition of Pyroptotic Cell Death, Influencing Inflammation	1
The EUCAST Disk Diffusion Method for Antimicrobial Susceptibility Testing of Oral Anaerobes	1
Rapid Automated Immunohistochemistry on Frozen Sections Enables Real‐Time Surgical Pathology Decisions	1
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Long‐term disease course, cost and prognosis of inflammatory bowel disease: epidemiological studies of a European and a Danish inception cohort	1
Exploring Eugenol as a Growth and Biofilm Inhibitor in Leptospira interrogans by a Combined Experimental and Computational Approach	1
Are we ready for translational research based on material and data from the Danish CancerBiobank and can we gain new knowledge from biobank registration?	1
Louis Pasteur—The life of a controversial scientist with a prepared mind, driven by curiosity, motivation, and competition	1
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Performance of Short‐Term Culture and Direct MALDI‐TOF MS for Identification of Candida Species From Blood Cultures	1
Localized large B‐cell lymphoma with MYC and BCL6 rearrangements as an unexpected finding in an appendectomy specimen	1
Antibacterial Activity of Staphylococcus epidermidis CS05 and Pseudomonas fluorescens	1
Real‐world data confirm elexacftor/tezacaftor/ivacaftor modulators halves sweat chloride concentration in eligible people with cystic fibrosis	1
Polyphyllin I, a strong antifungal compound against Candida albicans	1
Predicting Therapeutic Response to Molecular Hydrogen in Autoimmune Diseases via Immunophenotyping	1
Effect of COVID ‐19 Pandemic on Epidemiology and Antimicrobial Susceptibility of Campylobacter Species	1
XIST Improves Mitophagy and Exerts Perioperative Myocardial Protection Through miR ‐212‐3p/ C	1
Cytomegalovirus Lymphadenitis Mimicking Relapsed Lymphoma After CD19 Chimeric Antigen Receptor ( CAR	1
Investigating the role of Candida albicans as a universal substrate for oral bacteria using a transcriptomic approach: implications for interkingdom biofilm control?	1
Evaluation of the Efficacy of Some Natural Products Against Methicillin‐Resistant Staphylococcus aureus	1
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Streptococcus mutans and Cariogenic Biofilms: Mechanisms, Disruption Strategies, and Future Therapeutic Directions	1
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Pathological image profiling identifies onco‐microbial, tumor immune microenvironment, and prognostic subtypes of colorectal cancer	1
Impact of extracellular enzymes on Staphylococcus aureus host tissue adaptation and infection	1
Shiga toxin‐producing Escherichia coli (STEC) stool multiplex PCR can replace culture for clinical diagnosis and follow‐up	1
APMIS focus issue 2023—fungal infections: diagnostics and therapeutics	1
An Evaluation Into the Robustness of Grading of Pleural Mesothelioma Outside of Specialist Centres	1
Avidity maturation of anti‐spike IgG after vaccination in COVID‐19 convalescent vs COVID‐19 naïve patients	1
miR‐5701 Drives Bone Fracture Repair in Osteoporosis Through TP53 Regulation	1
The autonomic nerves around the vein of Marshall: a postmortem study with clinical implications	1
Vaginal microecology and its role in human papillomavirus infection and human papillomavirus associated cervical lesions	1
Analysis of Human miRNA Derived From Bladder Epithelial Cells Infected With Uropathogenic Escheric	1