Genomics

Article	Citations
Genotyping coronavirus SARS-CoV-2: methods and implications	217
Identification and validation of immune-related lncRNA prognostic signature for breast cancer	181
Mutations on COVID-19 diagnostic targets	150
Vaccine-escape and fast-growing mutations in the United Kingdom, the United States, Singapore, Spain, India, and other COVID-19-devastated countries	148
Genetics and genomics of SARS-CoV-2: A review of the literature with the special focus on genetic diversity and SARS-CoV-2 genome detection	121
Integration of multi-objective PSO based feature selection and node centrality for medical datasets	117
A pan-cancer analysis of the oncogenic role of staphylococcal nuclease domain-containing protein 1 (SND1) in human tumors	96
Evolutionary dynamics of chloroplast genomes in subfamily Aroideae (Araceae)	79
iBitter-SCM: Identification and characterization of bitter peptides using a scoring card method with propensity scores of dipeptides	77
Pathogenesis related protein-1 (PR-1) genes in tomato (Solanum lycopersicum L.): Bioinformatics analyses and expression profiles in response to drought stress	65
Predicting lncRNA–miRNA interactions based on interactome network and graphlet interaction	64
Discovery and in silico evaluation of aminoarylbenzosuberene molecules as novel checkpoint kinase 1 inhibitor determinants	57
LncRNAs related key pathways and genes in ischemic stroke by weighted gene co-expression network analysis (WGCNA)	55
Molecular characterization of ascorbate peroxidase (APX) and APX-related (APX-R) genes in Triticum aestivum L.	54
Non-coding RNAs: The key detectors and regulators in cardiovascular disease	54
Genomic scans for selection signatures revealed candidate genes for adaptation and production traits in a variety of cattle breeds	46
Molecular conservation and differential mutation on ORF3a gene in Indian SARS-CoV2 genomes	46
Prediction of antioxidant proteins using hybrid feature representation method and random forest	46
Comprehensive analysis of TCR repertoire in COVID-19 using single cell sequencing	46
Integrated genomic selection for rapid improvement of crops	46
Using extreme gradient boosting to identify origin of replication in Saccharomyces cerevisiae via hybrid features	45
Identification and characterization of circular RNA in lactating mammary glands from two breeds of sheep with different milk production profiles using RNA-Seq	45
R2R3-MYB transcription factor family in tea plant (Camellia sinensis): Genome-wide characterization, phylogeny, chromosome location, structure and expression patterns	44
Effect of scopoletin on phagocytic activity of U937-derived human macrophages: Insights from transcriptomic analysis	44
Single-cell RNA-seq reveals different subsets of non-specific cytotoxic cells in teleost	43

Complete genome sequence of Sphingomonas sp. Cra20, a drought resistant and plant growth promoting rhizobacteria	41
Microbiome dynamics and genomic determinants of bovine mastitis	41
Bisulphite sequencing reveals dynamic DNA methylation under desiccation and salinity stresses in rice cultivars	41
Whole genome sequence of an edible and medicinal mushroom, Hericium erinaceus (Basidiomycota, Fungi)	41
A computational approach to design potential siRNA molecules as a prospective tool for silencing nucleocapsid phosphoprotein and surface glycoprotein gene of SARS-CoV-2	40
A hitchhiker's guide to single-cell transcriptomics and data analysis pipelines	40
Identification of a prognostic signature of epithelial ovarian cancer based on tumor immune microenvironment exploration	39
Development and validation of a 14-gene signature for prognosis prediction in hepatocellular carcinoma	38
High-throughput sequencing provides insights into oral microbiota dysbiosis in association with inflammatory bowel disease	38
Genome-wide analysis of wall associated kinase (WAK) gene family in barley	38
Genome-wide identification of PYL gene family in wheat: Evolution, expression and 3D structure analysis	37
Interferon-induced transmembrane protein-3 genetic variant rs12252 is associated with COVID-19 mortality	37
Genome-wide analysis of AP2/ERF transcription factors in pineapple reveals functional divergence during flowering induction mediated by ethylene and floral organ development	36
A signature of immune-related gene pairs predicts oncologic outcomes and response to immunotherapy in lung adenocarcinoma	36
Estimating gene expression from DNA methylation and copy number variation: A deep learning regression model for multi-omics integration	35
SARS-CoV2 envelope protein: non-synonymous mutations and its consequences	34
Identification of a five-gene signature of the RGS gene family with prognostic value in ovarian cancer	34
Genome-wide identification of auxin response factor (ARF) gene family and the miR160-ARF18-mediated response to salt stress in peanut (Arachis hypogaea L.)	33
Polishing the Oxford Nanopore long-read assemblies of bacterial pathogens with Illumina short reads to improve genomic analyses	33
Genome-wide codon usage pattern analysis reveals the correlation between codon usage bias and gene expression in Cuscuta australis	33
Trends of mutation accumulation across global SARS-CoV-2 genomes: Implications for the evolution of the novel coronavirus	32
Prognostic significance of ARL9 and its methylation in low-grade glioma	32
Multi-locus genome-wide association studies reveal novel genomic regions associated with vegetative stage salt tolerance in bread wheat (Triticum aestivum L.)	32
NGS-based characterization of microbial diversity and functional profiling of solid tannery waste metagenomes	31
The regulatory functions of circular RNAs in osteosarcoma	31
Locate-R: Subcellular localization of long non-coding RNAs using nucleotide compositions	31
Comparative genomic analysis of Erwinia amylovora reveals novel insights in phylogenetic arrangement, plasmid diversity, and streptomycin resistance	30
Host-derived artificial miRNA-mediated silencing of ecdysone receptor gene provides enhanced resistance to Helicoverpa armigera in tomato	30
A genome-wide association study, supported by a new chromosome-level genome assembly, suggests sox2 as a main driver of the undifferentiatiated ZZ/ZW sex determination of turbot (Scophthalmus maximus)	30
Complete genome sequence analysis of a strain Lactobacillus pentosus ZFM94 and its probiotic characteristics	30
Detection of molecular signatures and pathways shared in inflammatory bowel disease and colorectal cancer: A bioinformatics and systems biology approach	30
Fourteen complete mitochondrial genomes of butterflies from the genus Lethe (Lepidoptera, Nymphalidae, Satyrinae) with mitogenome-based phylogenetic analysis	29
Single-cell RNA sequencing reveals the sustained immune cell dysfunction in the pathogenesis of sepsis secondary to bacterial pneumonia	29
Identification of angiotensin-converting enzyme 2 (ACE2) protein as the potential biomarker in SARS-CoV-2 infection-related lung cancer using computational analyses	29
Development and testing of a combined species SNP array for the European seabass (Dicentrarchus labrax) and gilthead seabream (Sparus aurata)	29
LncRNA MEG3 regulates breast cancer proliferation and apoptosis through miR-141-3p/RBMS3 axis	29
Exploration of a novel prognostic risk signatures and immune checkpoint molecules in endometrial carcinoma microenvironment	28
Genome-based analysis reveals a novel SNMP group of the Coleoptera and chemosensory receptors in Rhaphuma horsfieldi	28
Genome-wide identification, characterization and expression analysis of the TLP gene family in melon (Cucumis melo L.)	28
iAMY-SCM: Improved prediction and analysis of amyloid proteins using a scoring card method with propensity scores of dipeptides	28
Analysis of candidate genes expression associated with defense responses to root and collar rot disease caused by Phytophthora capsici in peppers Capsicum annuum	28
Whole-genome sequencing to identify candidate genes for litter size and to uncover the variant function in goats (Capra hircus)	28
Probing antiviral drugs against SARS-CoV-2 through virus-drug association prediction based on the KATZ method	28
Chloroplast genome evolution in the Dracunculus clade (Aroideae, Araceae)	27
Characterization of the pectin methyl-esterase gene family and its function in controlling pollen tube growth in pear (Pyrus bretschneideri)	27
Effect of ELOVL6 on the lipid metabolism of bovine adipocytes	27
Genome analysis reveals probiotic propensities of Paenibacillus polymyxa HK4	27
Molecular pathology of human knee arthrofibrosis defined by RNA sequencing	27
Pan-cancer analysis of the CASP gene family in relation to survival, tumor-infiltrating immune cells and therapeutic targets	27
SHCBP1 interacting with EOGT enhances O-GlcNAcylation of NOTCH1 and promotes the development of pancreatic cancer	26

Cotton transcriptome analysis reveals novel biological pathways that eliminate reactive oxygen species (ROS) under sodium bicarbonate (NaHCO3) alkaline stress	26
The complete mitochondrial genome of Calappa bilineata: The first representative from the family Calappidae and its phylogenetic position within Brachyura	26
Dissecting the molecular responses of lentil to individual and combined drought and heat stresses by comparative transcriptomic analysis	26
Transcriptome and metabolome profiling unveil the accumulation of flavonoids in Dendrobium officinale	26
Complete genome sequence and comparative genomic analysis of Enterococcus faecalis EF-2001, a probiotic bacterium	26
Phylogenetic perspective on the relationships and evolutionary history of the Acipenseriformes	26
Core proteome mediated therapeutic target mining and multi-epitope vaccine design for Helicobacter pylori	26
Epigenetics and microRNAs in cardiovascular diseases	26
Comparative genomic signature representations of the emerging COVID-19 coronavirus and other coronaviruses: High identity and possible recombination between Bat and Pangolin coronaviruses	26
Missense mutations in SARS-CoV2 genomes from Indian patients	26
The pattern of runs of homozygosity and genomic inbreeding in world-wide sheep populations	26
Development and validation of a novel survival model for head and neck squamous cell carcinoma based on autophagy-related genes	26
Genome-wide identification and expression analysis of the MYB transcription factor in Japanese plum (Prunus salicina)	25
Multi-feature fusion for deep learning to predict plant lncRNA-protein interaction	25
i6mA-stack: A stacking ensemble-based computational prediction of DNA N6-methyladenine (6mA) sites in the Rosaceae genome	25
Global multi-omics and systems pharmacological strategy unravel the multi-targeted therapeutic potential of natural bioactive molecules against COVID-19: An in silico approach	25
Comparative genomics and molecular adaptational analysis of Arthrobacter from Sikkim Himalaya provided insights into its survivability under multiple high-altitude stress	25
MiR-145 reduces the activity of PI3K/Akt and MAPK signaling pathways and inhibits adipogenesis in bovine preadipocytes	25
Prediction of N7-methylguanosine sites in human RNA based on optimal sequence features	25
Pan-genomics, drug candidate mining and ADMET profiling of natural product inhibitors screened against Yersinia pseudotuberculosis	25
Genome-wide identification and expression profiling of HD-ZIP gene family in Medicago truncatula	25
A comprehensive transcriptome analysis of contrasting rice cultivars highlights the role of auxin and ABA responsive genes in heat stress response	24
Complete chloroplast genome sequencing of ten wild Fragaria species in China provides evidence for phylogenetic evolution of Fragaria	24
ChIP-R: Assembling reproducible sets of ChIP-seq and ATAC-seq peaks from multiple replicates	24
m6A mRNA methylation regulates the development of gestational diabetes mellitus in Han Chinese women	24
The Human Eye Transcriptome Atlas: A searchable comparative transcriptome database for healthy and diseased human eye tissue	24
Key genetic variants associated with variation of milk oligosaccharides from diverse human populations	24
Function and characterization of the promoter region of perilipin 1 (PLIN1): Roles of E2F1, PLAG1, C/EBPβ, and SMAD3 in bovine adipocytes	24
Downregulation of lncRNA ZFAS1 and upregulation of microRNA-129 repress endocrine disturbance, increase proliferation and inhibit apoptosis of ovarian granulosa cells in polycystic ovarian syndrome by	24
Genome-wide characterization and functional analysis of class III peroxidase gene family in soybean reveal regulatory roles of GsPOD40 in drought tolerance	24
Genome-wide analysis of tandem duplicated genes and their contribution to stress resistance in pigeonpea (Cajanus cajan)	24
Elevation of long non-coding RNA GAS5 and knockdown of microRNA-21 up-regulate RECK expression to enhance esophageal squamous cell carcinoma cell radio-sensitivity after radiotherapy	23
Leaf transcriptomic response mediated by cold stress in two maize inbred lines with contrasting tolerance levels	23
Construction and validation of a TP53-associated immune prognostic model for gastric cancer	23
AgNAC1, a celery transcription factor, related to regulation on lignin biosynthesis and salt tolerance	23
Cytosolic ascorbate peroxidase 1 modulates ascorbic acid metabolism through cooperating with nitrogen regulatory protein P-II in tea plant under nitrogen deficiency stress	23
Identification and validation of a six-lncRNA prognostic signature with its ceRNA networks and candidate drugs in lower-grade gliomas	23
Characterizing the effect of background selection on the polygenicity of brain-related traits	23
Comparative biochemical and transcriptome analyses in tomato and eggplant reveal their differential responses to Tuta absoluta infestation	23
Roles of transcription factor SQUAMOSA promoter binding protein-like gene family in papaya (Carica papaya) development and ripening	23
Small RNA deep sequencing reveals the expressions of microRNAs in ovine mammary gland development at peak-lactation and during the non-lactating period	23
circSLC8A1 sponges miR-671 to regulate breast cancer tumorigenesis via PTEN/PI3k/Akt pathway	22
The nedd-8 activating enzyme gene underlies genetic resistance to infectious pancreatic necrosis virus in Atlantic salmon	22
An 18-gene signature based on glucose metabolism and DNA methylation improves prognostic prediction for urinary bladder cancer	22
Structural changes induced by substitution of amino acid 129 in the coat protein of Cucumber mosaic virus	22
Treatment response to low-dose ketamine infusion for treatment-resistant depression: A gene-based genome-wide association study	22
Deciphering the biodesulfurization pathway employing marine mangrove Bacillus aryabhattai strain NM1-A2 according to whole genome sequencing and transcriptome analyses	22
lncRNA- RP11-156p1.3, novel diagnostic and therapeutic targeting via CRISPR/Cas9 editing in hepatocellular carcinoma	22
An overview on miRNA-encoded peptides in plant biology research	22
Genome-wide investigation and expression analysis of APETALA-2 transcription factor subfamily reveals its evolution, expansion and regulatory role in abiotic stress responses in Indica Rice (Oryza sat	22
MicFunPred: A conserved approach to predict functional profiles from 16S rRNA gene sequence data	22
Transcriptomics and metabolomics reveal the induction of flavonoid biosynthesis pathway in the interaction of Stylosanthes-Colletotrichum gloeosporioides	22
Genome-wide identification and expression analysis of flowering-related genes reveal putative floral induction and differentiation mechanisms in tea plant (Camellia sinensis)	22
Genome-wide identification and comparative analysis of the ADH gene family in Chinese white pear (Pyrus bretschneideri) and other Rosaceae species	21
Transcriptome analysis of biological pathways associated with heterosis in Chinese cabbage	21
miRNA biomarkers for predicting overall survival outcomes for head and neck squamous cell carcinoma	21
Repurposed drugs and nutraceuticals targeting envelope protein: A possible therapeutic strategy against COVID-19	21
Ammonium transporter 1 (AMT1) gene family in tomato (Solanum lycopersicum L.): Bioinformatics, physiological and expression analyses under drought and salt stresses	21
Plant-pathogen interactions: MicroRNA-mediated trans-kingdom gene regulation in fungi and their host plants	21
Salmonella Typhi acquires diverse plasmids from other Enterobacteriaceae to develop cephalosporin resistance	21
Identification and characterization of long non-coding RNAs regulating resistant starch biosynthesis in bread wheat (Triticum aestivum L.)	21
Genome-wide analysis of the SBP-box gene family transcription factors and their responses to abiotic stresses in tea (Camellia sinensis)	21
Genome-wide association mapping reveals key genomic regions for physiological and yield-related traits under salinity stress in wheat (Triticum aestivum L.)	21
The ionotropic receptor gene family in Lepidoptera and Trichoptera: Annotation, evolutionary and functional perspectives	20
Advances in genomics and genome editing for breeding next generation of fruit and nut crops	20
Mining therapeutic and prognostic significance of STATs in renal cell carcinoma with bioinformatics analysis	20
Decreased expression of HADH is related to poor prognosis and immune infiltration in kidney renal clear cell carcinoma	20
The macronuclear genome of anaerobic ciliate Entodinium caudatum reveals its biological features adapted to the distinct rumen environment	20
Combined GWAS and QTL mapping revealed candidate genes and SNP network controlling recovery and tolerance traits associated with drought tolerance in seedling winter wheat	20
Silencing Sirtuin 6 induces cell cycle arrest and apoptosis in non-small cell lung cancer cell lines	20
Longitudinal blood transcriptomic analysis to identify molecular regulatory patterns of bovine respiratory disease in beef cattle	20
A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans	20
High-resolution temporal transcriptome sequencing unravels ERF and WRKY as the master players in the regulatory networks underlying sesame responses to waterlogging and recovery	20
GhTULP34, a member of tubby-like proteins, interacts with GhSKP1A to negatively regulate plant osmotic stress	20
Identification, evolution and expression analysis of WRKY gene family in Eucommia ulmoides	20
Characterization of the complete mitochondrial genome of Barilius malabaricus and its phylogenetic implications	20
Transcriptomics and metabolomics analyses of the mechanism of flavonoid synthesis in seeds of differently colored quinoa strains	20
Stem lodging resistance in hulless barley: Transcriptome and metabolome analysis of lignin biosynthesis pathways in contrasting genotypes	19
Whole-genome sequencing of the endemic Antarctic fungus Antarctomyces pellizariae reveals an ice-binding protein, a scarce set of secondary metabolites gene clusters and provides insights on Thelebola	19
Identifying potential DNA methylation markers in early-stage colorectal Cancer	19

Linkage mapping and genome annotation give novel insights into gene family expansions and regional recombination rate variation in the painted lady (Vanessa cardui) butterfly	19
Analysis of the antennal transcriptome and odorant-binding protein expression profiles of the parasitoid wasp Encarsia formosa	19
Genome-wide identification and comparative analysis of the WRKY gene family in aquatic plants and their response to abiotic stresses in giant duckweed (Spirodela polyrhiza)	19
Phylogenetic relationships in Chinese oaks (Fagaceae, Quercus): Evidence from plastid genome using low-coverage whole genome sequencing	19
High expression of bone morphogenetic protein 1 (BMP1) is associated with a poor survival rate in human gastric cancer, a dataset approaches	19
High-quality reference genome for Clonorchis sinensis	19
Uncloaking lncRNA-meditated gene expression as a potential regulator of CMS in cotton (Gossypium hirsutum L.)	19
m6A modification of RNA and its role in cancer, with a special focus on lung cancer	19
Genetic and epigenetic stability of stem cells: Epigenetic modifiers modulate the fate of mesenchymal stem cells	19
Transcriptional mechanism of differential sugar accumulation in pulp of two contrasting mango (Mangifera indica L.) cultivars	19
Machine learning method using position-specific mutation based classification outperforms one hot coding for disease severity prediction in haemophilia ‘A’	19
Plant RNA-mediated gene regulatory network	19
RNA-Seq analysis and WGCNA reveal dynamic molecular responses to air exposure in the hard clam Mercenaria mercenaria	18
An evaluation of the species and subspecies of the genus Salmonella with whole genome sequence data: Proposal of type strains and epithets for novel S. enterica subspecies VII, VIII, IX, X and XI	18
Taxonomic and functional profiling of the microbial communities of Arabian Sea: A metagenomics approach	18
The salmon louse genome: Copepod features and parasitic adaptations	18
mRNA and microRNA selection for breast cancer molecular subtype stratification using meta-heuristic based algorithms	18
De novo transcriptome assembly and sex-biased gene expression in the gonads of Amur catfish (Silurus asotus)	18
Transcriptome-wide analysis reveals spatial correlation between N6-methyladenosine and binding sites of microRNAs and RNA-binding proteins	18
Genome-wide analysis of the role of DNA methylation in inbreeding depression of reproduction in Langshan chicken	18
Genetic variants in MYF5 affected growth traits and beef quality traits in Chinese Qinchuan cattle	18
The whole-genome sequencing and analysis of a Ganoderma lucidum strain provide insights into the genetic basis of its high triterpene content	18
Genome-wide supermatrix analyses of maples (Acer, Sapindaceae) reveal recurring inter-continental migration, mass extinction, and rapid lineage divergence	18
Molecular evolution and regulation of DHN melanin-related gene clusters are closely related to adaptation of different melanin-producing fungi	18
Genome-wide identification, characterization and expression analysis of the amino acid permease gene family in tea plants (Camellia sinensis)	18
SARS-CoV-2 VOCs, Mutational diversity and clinical outcome: Are they modulating drug efficacy by altered binding strength?	18
Long non-coding RNA C5orf64 is a potential indicator for tumor microenvironment and mutation pattern remodeling in lung adenocarcinoma	17
Genome-wide identification and expression profiling of cytosine-5 DNA methyltransferases during drought and heat stress in wheat (Triticum aestivum)	17
Genomic diversity and selection sweeps identified in Indian swamp buffaloes reveals it's uniqueness with riverine buffaloes	17
An efficient hybrid feature selection method to identify potential biomarkers in common chronic lung inflammatory diseases	17
A machine learning approach to unmask novel gene signatures and prediction of Alzheimer's disease within different brain regions	17
Tissue-based long non-coding RNAs “PVT1, TUG1 and MEG3” signature predicts Cisplatin resistance in ovarian Cancer	17
Molecular mechanisms of mesocotyl elongation induced by brassinosteroid in maize under deep-seeding stress by RNA-sequencing, microstructure observation, and physiological metabolism	17
Identification of transfer RNA-derived fragments and their potential roles in aortic dissection	17
Regulation of related genes promoting resistant in Iris against root rot disease, Fusarium oxysporum f. sp. gladioli	17
Transcriptome of tambaqui Colossoma macropomum during gonad differentiation: Different molecular signals leading to sex identity	17
Co-expression of the SARS-CoV-2 entry molecules ACE2 and TMPRSS2 in human ovaries: Identification of cell types and trends with age	17
Molib: A machine learning based classification tool for the prediction of biofilm inhibitory molecules	17
Cooperative binding of transcription factors in the human genome	17
Development and validation of a six-RNA binding proteins prognostic signature and candidate drugs for prostate cancer	17
Integration of selection signatures and multi-trait GWAS reveals polygenic genetic architecture of carcass traits in beef cattle	17
A chromosome-level genome assembly of the striped catfish (Pangasianodon hypophthalmus)	17
Genome assembly, sex-biased gene expression and dosage compensation in the damselfly Ischnura elegans	17
Deep phylo-taxono genomics reveals Xylella as a variant lineage of plant associated Xanthomonas and supports their taxonomic reunification along with Stenotrophomonas and Pseudoxanthomonas	17
Single-cell alternative splicing analysis reveals dominance of single transcript variant	17
Genome-wide identification and evolution of Dof transcription factor family in cultivated and ancestral cotton species	17
A panel of platelet-associated circulating long non-coding RNAs as potential biomarkers for colorectal cancer	16
Enhanced thermo-tolerance in transgenic potato (Solanum tuberosum L.) overexpressing hydrogen peroxide-producing germin-like protein (GLP)	16
Accelerated discovery of functional genomic variation in pigs	16
Transcriptome analysis reveals immune pathways underlying resistance in the common carp Cyprinus carpio against the oomycete Aphanomyces invadans	16
Kinless hubs are potential target genes in prostate cancer network	16
CancerEnD: A database of cancer associated enhancers	16
Biallelic variant in DACH1, encoding Dachshund Homolog 1, defines a novel candidate locus for recessive postaxial polydactyly type A	16
Genome-wide association studies for agronomical traits in winter rice accessions of Assam	16
The complete mitochondrial genome of the sand bubbler crab Scopimera globosa and its phylogenetic position	16
Fragmented mitochondrial genomes evolved in opposite directions between closely related macaque louse Pedicinus obtusus and colobus louse Pedicinus badii	16
Single-cell transcriptomic analyses of dairy cattle ruminal epithelial cells during weaning	16
Identification of novel loss of function variants in MBOAT7 resulting in intellectual disability	16
Cell type diversity in scallop adductor muscles revealed by single-cell RNA-Seq	16
Comparative transcriptome analysis of resistant and cultivated tomato lines in response to Clavibacter michiganensis subsp. michiganensis	16
Integration of transcriptome and cistrome analysis identifies RUNX1-target genes involved in pancreatic cancer proliferation	16
Preferential expression of a HPV genotype in invasive cervical carcinomas infected by multiple genotypes	16
A four-methylated LncRNA signature predicts survival of osteosarcoma patients based on machine learning	16
Complete, high-quality genomes from long-read metagenomic sequencing of two wolf lichen thalli reveals enigmatic genome architecture	16
Phenotypic and gene expression features associated with variation in chronic ethanol consumption in heterogeneous stock collaborative cross mice	16
Bioinformatics analysis of the genes involved in the extension of prostate cancer to adjacent lymph nodes by supervised and unsupervised machine learning methods: The role of SPAG1 and PLEKHF2	16
Comparative genomics analysis of two banana Fusarium wilt biocontrol endophytes Bacillus subtilis R31 and TR21 provides insights into their differences on phytobeneficial trait	15
Goat sperm associated antigen 17 protein gene (SPAG17): Small and large fragment genetic variation detection, association analysis, and mRNA expression in gonads	15
Comparative transcriptome and metabolomic profiling reveal the complex mechanisms underlying the developmental dynamics of tobacco leaves	15
Stage-specific transcriptomic analysis of the model cestode Hymenolepis microstoma	15
iTRAQ-based comparative proteomic analysis reveals high temperature accelerated leaf senescence of tobacco (Nicotiana tabacum L.) during flue-curing	15
Soybean-derived miRNAs specifically inhibit proliferation and stimulate apoptosis of human colonic Caco-2 cancer cells but not normal mucosal cells in culture	15
An integrated in silico based subtractive genomics and reverse vaccinology approach for the identification of novel vaccine candidate and chimeric vaccine against XDR Salmonella typhi H58	15
Genome sequencing and transcriptome analysis of Geotrichum citri-aurantii on citrus reveal the potential pathogenic- and guazatine-resistance related genes	15
Genome-wide identification and expression analysis of extensin genes in tomato	15
Characterization of bacterial community structure in the rhizosphere of Triticum aestivum L.	15
Investigating the gene expression profiles of cells in seven embryonic stages with machine learning algorithms	15
Myocardial infarction biomarker discovery with integrated gene expression, pathways and biological networks analysis	15
De novo assembly transcriptome analysis reveals the preliminary molecular mechanism of pigmentation in juveniles of the hard clam Mercenaria mercenaria	15
Long non-coding RNA transcriptome landscape of anthers at different developmental stages in response to drought stress in tomato	15
Genome-wide SNP analysis of Siamese cobra (Naja kaouthia) reveals the molecular basis of transitions between Z and W sex chromosomes and supports the presence of an ancestral super-sex chromosome in a	15
Expression profile analysis to identify circular RNA expression signatures in hair follicle of Hu sheep lambskin	15
Comparative transcriptomic analysis reveals that multiple hormone signal transduction and carbohydrate metabolic pathways are affected by Bacillus cereus in Nicotiana tabacum	15
m6A mRNA methylation analysis provides novel insights into heat stress responses in the liver tissue of sheep	15
Placental DNA methylation profiles in opioid-exposed pregnancies and associations with the neonatal opioid withdrawal syndrome	15
Whole genome sequence of the multi-resistant plant growth-promoting bacteria Streptomyces sp. Z38 with potential application in agroindustry and bio-nanotechnology	15
Genomics approaches to synthesize plant-based biomolecules for therapeutic applications to combat SARS-CoV-2	14
An in-silico method with graph-based multi-label learning for large-scale prediction of circRNA-disease associations	14
DNA N6-methyladenine involvement and regulation of hepatocellular carcinoma development	14
Genome-wide identification, characterization, and expression analysis of the monovalent cation-proton antiporter superfamily in maize, and functional analysis of its role in salt tolerance	14
Gut milieu shapes the bacterial communities of invasive silver carp	14
Blood DNA methylation markers associated with type 2 diabetes, fasting glucose, and HbA1c levels: An epigenome-wide association study in 316 adult twin pairs	14
Comparative genome analysis provides shreds of molecular evidence for reclassification of Leuconostoc mesenteroides MTCC 10508 as a strain of Leu. suionicum	14
Transcriptome-wide differences between Saccharomyces cerevisiae and Saccharomyces cerevisiae var. boulardii: Clues on host survival and probiotic activity based on promoter sequence variability	14
The potential role of c-MYC and polyamine metabolism in multiple drug resistance in bladder cancer investigated by metabonomics	14