OOIR: Observatory of International Research

Papers

(The H4-Index of Proteins-Structure Function and Bioinformatics is 26. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-03-01 to 2024-03-01.)

Article	Citations
Critical assessment of methods of protein structure prediction (CASP)—Round XIV	270
Applying and improving AlphaFold at CASP14	216
High‐accuracy protein structure prediction in CASP14	207
Human SARS CoV‐2 spike protein mutations	141
Multi‐state modeling of G‐protein coupled receptors at experimental accuracy	79
Perturbing the energy landscape for improved packing during computational protein design	76
Plastics degradation by hydrolytic enzymes: The plastics‐active enzymes database—PAZy	75
Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment	67
Assessment of protein model structure accuracy estimation in CASP14: Old and new challenges	47
Protein structure prediction using deep learning distance and hydrogen‐bonding restraints in CASP14	45
Assessing the utility of CASP14 models for molecular replacement	41
Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods	36
Energy‐based graph convolutional networks for scoring protein docking models	36
Protein tertiary structure prediction and refinement using deep learning and Rosetta in CASP14	35
Assessment of the CASP14 assembly predictions	35
Computational models in the service of X‐ray and cryo‐electron microscopy structure determination	33
Topology evaluation of models for difficult targets in the 14th round of the critical assessment of protein structure prediction (CASP14)	32
Target classification in the 14th round of the critical assessment of protein structure prediction (CASP14)	31
Hierarchical, rotation‐equivariant neural networks to select structural models of protein complexes	31
Assessment of thePETaseconformational changes induced by poly(ethylene terephthalate) binding	31
Assessment of prediction methods for protein structures determined by NMR in CASP14: Impact of AlphaFold2	29
AlphaFold2 predicts the inward‐facing conformation of the multidrug transporter LmrP	27
Molecular dynamics analysis of a flexible loop at the binding interface of the SARS‐CoV‐2 spike protein receptor‐binding domain	27
When homologous sequences meet structural decoys: Accurate contact prediction by tFold in CASP14—(tFold for CASP14 contact prediction)	27
Repurposing of FDA‐approved drugs against active site and potential allosteric drug‐binding sites of COVID‐19 main protease	26

Molecular basis for higher affinity of SARS‐CoV‐2 spike RBD for human ACE2 receptor