OOIR: Observatory of International Research

Papers

(The H4-Index of Proteins-Structure Function and Bioinformatics is 27. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)

Article	Citations
	197
SARS‐CoV‐2 neutralizing antibody epitopes are overlapping and highly mutated which raises the chances of escape variants and requires development of broadly reactive vaccines	183
Application of AlphaFold models in evaluating ligandable cysteines across E3 ligases	122
iNucRes‐ASSH: Identifying nucleic acid‐binding residues in proteins by using self‐attention‐based structure‐sequence hybrid neural network	118
Issue Information ‐ Table of Content	85
Order/Disorder Transitions Upon Protein Binding: A Unifying Perspective	76
Multiscale MD simulations of wild‐type and sickle hemoglobin aggregation	73
New simulation insights on the structural transition mechanism of bovine rhodopsin activation	62
Functional characterization of a hypothetical protein (TTHA1873) from Thermus thermophilus	61
Development of a Novel Method for Representing 3D Structures of Nucleotides Using the Concept of the TSR Algorithm and Evaluation of the Method Through Studying Specific Interactions Between DNAs and	57
Molecular dynamics studies of CED ‐4/ CED ‐9/ EGL	55
rrQNet : Protein contact map quality estimation by deep evolutionary reconciliation	46
Unraveling the Structural Basis of Biased Agonism in the β₂‐Adrenergic Receptor Through Molecular Dynamics Simulations	44
Protein structuromics: A new method for protein structure–function crosstalk in glioma	44
Molecular Dynamics Identify Variances Between Galectin Carbohydrate‐Binding Sites That Impact the Binding Site Conformation and Ligand Binding	41
Analyzing the cation‐aromatic interactions in proteins: Cation‐aromatic database V2.0	41
Comparative analysis of permanent and transient domain–domain interactions in multi‐domain proteins	36
Oxygen‐insensitive nitroreductase E. coli NfsA , but not NfsB , is inhi	35
Protein‐Ligand Structure and Affinity Prediction in CASP16 Using a Geometric Deep Learning Ensemble and Flow Matching	34
Issue Information ‐ Table of Content	33
In Silico Characterization of Bromo‐DragonFLY Binding to the 5‐HT_2A Receptor: Molecular Insights Into a Potent Designer Psychedelic	33
Molecular dynamics study reveals key disruptors of MEIG1–PACRG interaction	32
An in silico prediction of interaction models of influenza A virus PA and human C14orf166 protein	32
Fusion of two unrelated protein domains in a chimera protein and its 3D prediction: Justification of the x‐ray reference structures as a prediction b	28
Biochemical, Biophysical, and Mechanistic Insights on a Putative Oxidoreductase From Mycobacterium tuberculosis	28

Thermodynamic consequences of stapling side‐chains on a peptide ligand using a lactam‐bridge: A theoretical study on anti‐angiogenic peptides targeting VEGF	27
Location of S‐nitrosylated cysteines in protein three‐dimensional structures	27