OOIR: Observatory of International Research

Papers

(The TQCC of Genome is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-04-01 to 2024-04-01.)

Article	Citations
Machine learning for precision medicine	174
Epigenetic regulation of ACE2, the receptor of the SARS-CoV-2 virus¹	54
Fungal species concepts in the genomics era	49
Epigenetic mechanisms influencing COVID-19	39
BIOSCAN: DNA barcoding to accelerate taxonomy and biogeography for conservation and sustainability	29
Insertions of mitochondrial DNA into the nucleus—effects and role in cell evolution	28
Gut microbiome-mediated epigenetic regulation of brain disorder and application of machine learning for multi-omics data analysis	26
Clubroot in Brassica: recent advances in genomics, breeding, and disease management	23
Plant DNA barcoding necessitates marker-specific efforts to establish more comprehensive reference databases	20
coil: an R package for cytochrome c oxidase I (COI) DNA barcode data cleaning, translation, and error evaluation	19
Fast-GBS v2.0: an analysis toolkit for genotyping-by-sequencing data	19
Genome-wide identification and characterization of WOX genes in Cucumis sativus	18
Selection constraints determine preference for A/U-ending codons inTaxus contorta	17
The chicken model organism for epigenomic research	17
Using DNA-barcoded Malaise trap samples to measure impact of a geothermal energy project on the biodiversity of a Costa Rican old-growth rain forest	17
Nematode biodiversity assessments need vouchered databases: A BOLD reference library for plant-parasitic nematodes in the superfamily Criconematoidea	15
Cannabis, the multibillion dollar plant that no genebank wanted	14
A study on non-synonymous mutational patterns in structural proteins of SARS-CoV-2	14
Identification of lncRNAs in response to infection by Plasmodiophora brassicae in Brassica napus and development of lncRNA-based SSR markers	14
Taxonomic classification of the bacterial endosymbiont Wolbachia based on next-generation sequencing: is there molecular evidence for its presence in tardigrades?	13
Transcriptomic comparison of liver tissue between Anqing six-end-white pigs and Yorkshire pigs based on RNA sequencing	13
Polymorphism of thePLIN1gene and its association with body measures and ultrasound carcass traits in Qinchuan beef cattle	12
Transcriptional enhancers: from prediction to functional assessment on a genome-wide scale	12
Barcoding a can of worms: testing cox1 performance as a DNA barcode of Nematoda	12
DMSO and betaine significantly enhance the PCR amplification of ITS2 DNA barcodes from plants	12

The mitogenome of a Malagasy butterfly Malaza fastuosus (Mabille, 1884) recovered from the holotype collected over 140 years ago adds support for a new subfamily of Hesperiidae (Lepidoptera)	11
Whole-genome sequencing association analysis reveals the genetic architecture of meat quality traits in Chinese Qingyu pigs	11
Revisiting the evolution of the North American tetraploid treefrog (Hyla versicolor)	11
Primate-specific histone variants	11
Drug discovery and chemical probing inDrosophila	11
Chloroplast genomes of seven species of Coryloideae (Betulaceae): structures and comparative analysis	11
Understanding the genetic relationships between Indonesian bambara groundnut landraces and investigating their origins	10
Analysis of the core genome and pangenome of Clostridium butyricum	10
Reflections on the organization and the physical state of chromatin in eukaryotic cells	10
Genome-wide analysis of a putative lipid transfer protein LTP_2 gene family reveals CsLTP_2 genes involved in response of cucumber against root-knot nematode (Meloidogyne incognita)	10
Signatures of selection analysis using whole-genome sequence data reveals novel candidate genes for pony and light horse types	9
DNA sequence-based mapping and comparative genomics of theStgenome ofPseudoroegneria spicata(Pursh) Á. Löve versus wheat (Triticum aestivumL.) and barley (Hordeum vulgareL.	9
The genetics ofCannabis—genomic variations of key synthases and their effect on cannabinoid content	9
Genomic regions associated with resistance to Fusarium wilt in castor identified through linkage and association mapping approaches	9
Multi-marker DNA metabarcoding reflects tardigrade diversity in different habitats	8
Transfer of fusarium head blight resistance from Thinopyrum elongatum to bread wheat cultivar Chinese Spring	8
Molecular diversity and species delimitation in the family Gasteruptiidae (Hymenoptera: Evanioidea)	8
Baboon bearing resemblance in pigmentation pattern to Siamese cat carries a missense mutation in the tyrosinase gene	8
First records raise questions: DNA barcoding of Odonata in the middle of the Mediterranean	8
Complex intragene deletion leads to oculocutaneous albinism in tanuki (Japanese raccoon dog)	8
Full-length transcriptome analysis and identification of genes involved in asarinin and aristolochic acid biosynthesis in medicinal plant Asarum sieboldii	8
Distribution of FISH oligo-5S rDNA and oligo-(AGGGTTT)₃ in Hibiscus mutabilis L.	8
Integration of mandarin (Citrus reticulata) cytogenetic map with its genome sequence	8
Microbiomes of willow-galling sawflies: effects of host plant, gall type, and phylogeny on community structure and function	7
Origins and chromosome differentiation of Thinopyrum elongatum revealed by PepC and Pgk1 genes and ND-FISH	7
In-vitro anti-fungal assay and association analysis reveal a role for the Pinus monticola PR10 gene (PmPR10-3.1) in quantitative disease resistance to white pine blister rust	7
Alfalfa transcriptome profiling provides insight into miR156-mediated molecular mechanisms of heat stress tolerance	7
Adjusting extracellular pH to prevent entry of SARS-CoV-2 into human cells	7
Genomics and bioinformatics capacity in Africa: no continent is left behind	7
Environmental DNA bioassays corroborate field data for detection of overwintering species at risk Blanding’s turtles (Emydoidea blandingii)	7
Does variable epigenetic inheritance fuel plant evolution?	7
Versatile method to measure locomotion in adult Drosophila	7
Karyotype structure and cytogenetic markers of Amoimyrmex bruchi and Amoimyrmex silvestrii: contribution to understanding leaf-cutting ant relationships	6
Development and characterization of Triticum turgidum – Aegilops comosa and T. turgidum – Ae. markgrafii amphidiploids	6
Genetic diversity and ancestry of cacao (Theobroma cacaoL.) in Dominica revealed by single nucleotide polymorphism markers	6
Genome-wide identification of bZIP transcription factor genes related to starch synthesis in barley (Hordeum vulgare L.)	6
Enriched tandem repeats in chromosomal fusion points of Rineloricaria latirostris (Boulenger, 1900) (Siluriformes: Loricariidae)	6
Characterization and expression of the Pirin gene family in Triticum aestivum	6
Extreme genetic diversity among springtails (Collembola) in subterranean calcretes of arid Australia	6
Molecular identification and DNA barcode screening of acaroid mites in ground flour dust	6
Introgression of Thinopyrum elongatum DNA fragments carrying resistance to fusarium head blight into Triticum aestivum cultivar Chinese Spring is associated with alteration of gene expre	6
An endogenous retrovirus presumed to have been endogenized or relocated recently in a marsupial, the red-necked wallaby	6
Genotyping by sequencing for SNP marker development in onion	6
Complete chloroplast genome sequencing and comparative analysis reveals changes to the chloroplast genome after allopolyploidization in Cucumis	6