OOIR: Observatory of International Research

Papers

(The TQCC of Genome is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-02-01 to 2025-02-01.)

Article	Citations
Patterns of stability and change in the maize genome: a case study of small RNA transcriptomes in two recombinant inbred lines and their progenitors	254
Authentication of garlic (Allium sativum L.) supplements using a trnL^UAA mini-barcode	57
Correction: Barcoding lichen-forming fungi using 454 pyrosequencing is challenged by artifactual and biological sequence variation	41
Complete chloroplast genome sequencing and comparative analysis reveals changes to the chloroplast genome after allopolyploidization in Cucumis	40
Genome organization of major tandem repeats and their specificity for heterochromatin of macro- and microchromosomes in Japanese quail	33
Genomics and bioinformatics capacity in Africa: no continent is left behind	29
Fine mapping of a major QTL qPA7-1 for low hydrocyanic acid content in sorghum–sudangrass hybrid	22
Genome-wide investigation and expression analysis of the AP2/ERF family for selection of agarwood-related genes in Aquilaria sinensis (Lour.) Gilg	19
Determination of reverse transcriptase inhibitor resistance mutations in HIV-1 infected children in Côte d’Ivoire	18
Molecular identification and DNA barcode screening of acaroid mites in ground flour dust	17
Genome-wide characterization of the PDI gene family in Medicago truncatula and their roles in response to endoplasmic reticulum stress	16
Nematode biodiversity assessments need vouchered databases: A BOLD reference library for plant-parasitic nematodes in the superfamily Criconematoidea	16
An 82 bp tandem repeat family typical of 3′ non-coding end of Gypsy/TAT LTR retrotransposons is conserved in Coffea spp. pericentromeres	15
Molecular diversity and species delimitation in the family Gasteruptiidae (Hymenoptera: Evanioidea)	15
Genome-wide identification of bZIP transcription factor genes related to starch synthesis in barley (Hordeum vulgare L.)	15
Mitogenome evolution in Trichoderma afroharzianum strains: for a better understanding of distinguishing genus	14
Fragments derived from non-coding RNAs: how complex is genome regulation?	13
Note of appreciation	13
Using telomeric length measurements and methylation to understand the karyotype diversification of Ctenomys minutus (a small fossorial mammal)	12
Marsupial satellite DNA as faithful reflections of long-terminal repeat retroelement structure	12
Comparative analysis reveals chromosome number reductions in the evolution of African bermudagrass (Cynodon transvaalensisBurtt-Davy)	12
DMSO and betaine significantly enhance the PCR amplification of ITS2 DNA barcodes from plants	11
Structure and genetic diversity of Canadian Maritimes wild hops	11
In-vitro anti-fungal assay and association analysis reveal a role for the Pinus monticola PR10 gene (PmPR10-3.1) in quantitative disease resistance to white pine blister rust	10
Environmental DNA detection of endangered and invasive species in Kejimkujik National Park and Historic Site	10

Chromosome painting reveals the genomic structure of three polyploid species of Ipomoea	10
Primate-specific histone variants	10
A study on non-synonymous mutational patterns in structural proteins of SARS-CoV-2	9
Reflections on the organization and the physical state of chromatin in eukaryotic cells	9
Clubroot in Brassica: recent advances in genomics, breeding, and disease management	9
Genome Publication Awards 2021	8
The role ofPeroxin 7duringDrosophilaembryonic development	8
Asp/ASPM phospho-regulation throughout the cell cycle	8
Identification of full-length genes involved in the biosynthesis of β-caryophyllene and lupeol from the leaf transcriptome of Ayapana triplinervis	8
Use of species delimitation approaches to tackle the cryptic diversity of an assemblage of high Andean butterflies (Lepidoptera: Papilionoidea)	8
Sequence-based Identification of Polyamine Oxidase Genes in Sorghum bicolor L.	8
Versatile method to measure locomotion in adult Drosophila	8
Whole-genome comparative analysis reveals genetic mechanisms of disease resistance and heat tolerance of tropicalBos indicuscattle breeds	8
The complete chloroplast genome of Aristolochia fangchi provided insights into the phylogeny and species identification of Aristolochia	8
Karyotype Evolution of Suliformes and Description of a ♂Z1Z1Z2Z2/♀Z1Z2W Multiple Sex Chromosome System in boobies (Sula spp.)	8
Broad histone H4 monomethylation marks expressed genes involved in translation	8
Transcriptional enhancers: from prediction to functional assessment on a genome-wide scale	7
Molecular analysis of nematode-responsive defence genes CRF1, WRKY45, and PR7 in Solanum lycopersicum tissues during the infection of plant-parasitic nematode species of th	6
Extreme genetic diversity among springtails (Collembola) in subterranean calcretes of arid Australia	6
Genetic diversity and phylogenetic relationships of threadfin breams (Nemipterus spp.) from the Red Sea and eastern Mediterranean Sea	6
BIOSCAN: DNA barcoding to accelerate taxonomy and biogeography for conservation and sustainability	6
Gynogenetic diploids, tetraploids, or octoploids, and a path to polyploidy in anuran amphibians	6
DNA barcodes and new primers for nature’s pest controllers: the social wasps	6
Characterization and expression of the Pirin gene family in Triticum aestivum	6
Proteomic and lipidomics analyses of high fatty acid AhDGAT3 transgenic soybean reveals the key lipase gene associated with the lipid internal mechanism	6
Note of appreciation	5
Peroxisome inter-organelle cooperation in Drosophila	5
Assessing population genetic structure of three New Zealand stream insects using mitochondrial and nuclear DNA markers	5
Gut microbiome-mediated epigenetic regulation of brain disorder and application of machine learning for multi-omics data analysis	5
Autophagy in cell fate decisions: knowledge gained fromDrosophila	5
Distinct patterns of satDNA distribution in holocentric chromosomes of spike-sedges (Eleocharis, Cyperaceae)	5
SmFLS negatively regulates peel coloring of eggplant (Solanum melongena) under high temperature	5
Comparative satellite DNA mapping in species of the genus Prochilodus (Teleostei, Characiformes) and its evolutionary implications	5
Insights on mauritiana-like elements diversity in Mayetiola destructor and M. hordei (Diptera: Cecidomyiidae)	5
Genomic regions associated with resistance to Fusarium wilt in castor identified through linkage and association mapping approaches	5
Cytogenetic characterization and karyotype evolution in six Macroptilium species (Leguminosae)	5
Abundance of distal repetitive DNA sequences in Capsicum L. (Solanaceae) chromosomes	5
Identification of enhancers that drive the spatially restricted expression ofVsx1andRxin the outer proliferation center of the developingDrosophilaoptic lobe	5
Comparative plastomes of species from Phrymaceae and Mazaceae: insights into adaptive evolution, codon usage bias, and phylogenetic relationships	5
The chicken model organism for epigenomic research	5
Genetic diversity of Asian and European common wheat lines assessed by fluorescence in situ hybridization	5