OOIR: Observatory of International Research

Papers

(The median citation count of Genome is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-08-01 to 2026-08-01.)

Article	Citations
Marsupial satellite DNA as faithful reflections of long-terminal repeat retroelement structure	54
Towards a more pluralistic approach to evaluating the farm-level impacts of new breeding technologies in sub-Saharan Africa	15
A versatile high-density customized SNP array for augmenting genomic analysis in sheep	15
Asp/ASPM phospho-regulation throughout the cell cycle	14
Identification and functional validation of key enzymes related to polysaccharide biosynthesis in Platycodon grandiflorus	14
Development and application of new chromosome-specific oligonucleotide probes for Thinopyrum elongatum	14
Mitogenome evolution in Trichoderma afroharzianum strains: for a better understanding of distinguishing genus	14
Transcriptome analysis of Brassica napus near-isogenic lines carrying clubroot resistance from turnip (B. rapa var. rapifera)	11
Linking the spatial and genomic structure of adaptive potential for conservation management: a review	11
Differential cis -regulatory regions of KS dehydrins of Arctic and temperate Oxytropis spp.	11
The genome of the holothuroid Parastichopus tremulus	11
Single-cross prediction with imputed multiomic data: a case study in rapeseed	11
Whole genome sequencing and analysis of benzo(a)pyrene-degrading bacteria Bacillus cereus M72-4	11
Meta-analyses of the global multilocus genotypes of the human pathogen Campylobacter jejuni	9
Reduced representation bisulfite sequencing (RRBS) analysis reveals variation in distribution and levels of DNA methylation in white birch (Betula papyrifera) exposed to nickel	9
Comparative analysis of transposable elements dynamics in fish with different sex chromosome systems	9
Chromosomal evolution and evidence of a putative multiple sex chromosome system in the Amazonian northeastern pepper frog (Leptodactylus vastus, Lutz 1930)	8
Genomics-based taxonomy to clarify cannabis classification	8
Integrating behaviour and microbiomes into considerations of bee health	8
Detecting bumble bees in the wild using environmental DNA: development and validation of a qPCR assay for the endangered Franklin’s bumble bee ( Bombus franklini	8
Genome assembly, analysis, and mining of Kocuria flava NIO_001: a thiopeptide antibiotic synthesizing bacterium isolated from marine sponge	8
Molecular characterization and chromosomal distribution of Tc1/mariner transposons in Boana species (Anura, Hylidae)	8
Comprehensive whole genome sequence analysis unravels QTLs and genes under selection in Indian native riverine buffalo	8
Single-locus species delimitation of Pronophilina butterflies (Nymphalidae: Satyrini) in the Colombian Andes: congruence between morphology and MOTUs	7
Identification of adulteration in the market samples of saffron using morphology, HPLC, HPTLC, and DNA barcoding methods	7

Chloroplast genome of Ecbolium viride (Forssk.) Alston: plastome evolution and phylogenomics of Justiceae (Acanthaceae, Acanthoideae)	7
Aeromonas salmonicida isolates from Canada demonstrate wide distribution and clustering among mesophilic strains	7
DNA at the whim of the water: environmental DNA as a course-based undergraduate research experience	7
A Drosophila teissieri I-element retrotransposon’s ORF1p shows RNA binding cis -preference in the	6
Genetic insights: integrating DNA barcoding with taxonomy in the study of Baccaurea (Phyllanthaceae)	6
Fine mapping of a major QTL qPA7-1 for low hydrocyanic acid content in sorghum–sudangrass hybrid	6
Revealing gene–metabolite interactions in wheat defenses against Pyrenophora tritici-repentis in resistant and susceptible genotypes	6
First insights into the satellitomes and new evidence for the absence of canonical insect telomere in the Neuroptera order	6
Heat shock responsive genes in Brassicaceae: genome-wide identification, phylogeny, and evolutionary associations within and between genera	6
Structure and genetic diversity of Canadian Maritimes wild hops	6
Detection of polymorphisms in the prion-like protein Doppel (PRND) gene in Jeju black cattle	6
Paenibacillus terrae NK3-4 regulates the transcription of growth-related and stress resistance-related genes in rice	6
Using telomeric length measurements and methylation to understand the karyotype diversification of Ctenomys minutus (a small fossorial mammal)	6
The filamins of Drosophila	6
Variety-dependent microbial community restructuring under salinity stress outweighs direct benefits of native microbe inoculation in Hordeum vulgare	5
Evolutionary speed of proteins in the genus Staphylococcus: a focus on proteins involved in natural competence	5
delimtools : an R package for species delimitation	5
AVITI as an alternative to Illumina for low-cost genome-wide genotyping	5
Concordance and divergence between self-declared ancestry and genome-derived ancestry composition in 10,250 participants from the HostSeq cohort	5
The first DNA barcode survey of insects from Lebanon	5
Development and application of whole-chromosome painting of chromosomes 7A and 8A of Arachis duranensis based on chromosome-specific single-copy oligonucleotides	5
Pangenomic analysis of three putative hydrocarbon degrading genera Limnohabitans, Aquabacterium, and Novosphingobium collected from freshwater sources	5
Uneven DNA barcode representation among tree communities and regions in tropical South America	4
Diversity and T-cell antigenic potentials of Mycoplasma mycoides subsp. mycoides vaccine candidates	4
Environmental drivers behind the genetic differentiation in mountain chickadees ( Poecile gambeli )	4
Candidate genes validation for intramuscular fat content of Nellore Cattle	4
Analysis of the winter oilseed rape recombination landscape suggests maternal–paternal bias	4
Comparative genome analysis of virulent strains of Bacillus anthracis causing anthrax outbreaks in animals	4
Frequency of cytosine methylation in the adjacent regions of soybean retrotransposon SORE-1 depends on chromosomal location	4
Identification of alternative splicing and RNA-binding proteins involved in myocardial ischemia–reperfusion injury	4
Genes influencing deposition of melanin in breast muscle of the Xuefeng black bone chicken based on bioinformatic analysis	3
The Cucumis sativus kinome: identification, annotation, and expression patterns in response to powdery mildew infection	3
Satellite DNAs, heterochromatin, and sex chromosomes of the wattled jacana (Charadriiformes; Jacanidae): a species with highly rearranged karyotype	3
High nucleotide similarity of three Copia lineage LTR retrotransposons among plant genomes	3
Plant immune resilience to a changing climate: molecular insights and biotechnological roadmaps	3
Diversity of tet(L)-bearing plasmids found in Eastern Canadian Staphylococcus hyicus isolates from swine	3
DNA Metabarcoding of Myotis lucifugus Guano Reveals Unexplored Arthropod Diversity and Diet Variability in Newfoundland	3
DESeq2-MultiBatch: batch correction for multi-factorial RNA-seq experiments	3
Phylogenomics of transcriptionally active AP2/ERF and bHLH transcription factors and study of their promoter regions in Nothapodytes nimmoniana (J.Graham) Mabb	3
Note of appreciation	3
Specific amino acid changes correlate with pathogenic flavobacteria	3
Development of EST-SSR markers in Bergenia ciliata using de novo transcriptome sequencing	3
Comparative genome analysis of Pasteurella multocida strains of porcine origin	3
Complete genome analysis of Pseudomonas furukawaii ZS1 isolated from grass carp (Ctenopharyngodon idellus) culture water	3
Gene regulation supporting sociality shared across lineages and variation in complexity	3
Genetic diversity and positive signatures of selection in indigenous cattle breeds of Iran	3
Genomic prediction in Brassica napus: evaluating the benefit of imputed whole-genome sequencing data	2
A quick guide to the calcium-dependent protein kinase family in Brassica napus	2
Diversity and antigenic potentials of Mycoplasmopsis bovis secreted and outer membrane proteins within a core genome of strains isolated from North American bison and cattle	2
Analysis of apoptosis levels and MMP7 gene expression in ovaries of postpartum female rabbits after long-term use of LHRH-A3	2

Circadian rhythm and immunity: decoding chrono-immunology using the model organism Drosophila melanogaster	2
The genome sequence of the açaí berry ( Euterpe oleracea Mart.) and RNA-Seq analysis of the fruit ripening	2
Half-chromatid mutation as a possible cause of mosaic males and females in Hymenoptera and rare fertile male tortoiseshell cats	2
Low complexity (A/C)GG repeats and m ¹ A methylation sites in 5′ UTRs regulate gene expression	2
In silico genomic characterization, classification, and expression profiling of the LRR-RLK family in Lactuca sativa under stress and developmental condi	2
miR-181a-5p is a potential candidate epigenetic biomarker in multiple sclerosis	2
Chromosomal and molecular perspectives on Potamotrygon motoro (Müller & Henle, 1841) from central Amazon	2
In silico analysis of secreted proteins via Sec- and Tat-pathways of Clavibacter spp. unravels functional diversity related to	2
Note of appreciation	2
Understanding the genomics responses of freshwater zooplanktons to salinization: a research hotspot in a saltier world	2
The complete chloroplast genome of Aristolochia fangchi provided insights into the phylogeny and species identification of Aristolochia	2
Chromosomes in the African frog genus Tomopterna (Pyxicephalidae) and probing the origin of tetraploid Tomopterna tandyi	2
Karyotype analysis of the endangered tree frog Nyctimantis pomba (Anura: Hylidae: Lophyohylini) reveals differences from congeneric species	2
The first chromosome-level annotated reference genome for Chrosomus eos , the Northern Redbelly Dace	2
Abiotic stress-responsive tRNA-derived fragments in pitanga ( Eugenia uniflora L . ): regulatory roles in	2
Broad histone H4 monomethylation marks expressed genes involved in translation	2
Cytogenetic characterization and karyotype evolution in six Macroptilium species (Leguminosae)	2
The role of CRISPR in modern plant breeding: overcoming breeding barriers and legislative challenges through transgene-free genome editing	2
Satellitome analysis on Microtus thomasi (Arvicolinae) genome, a mammal species with high karyotype and sex chromosome variations	1
Autophagy in cell fate decisions: knowledge gained fromDrosophila	1
The repetitive DNA landscape in the brizantha agamic complex of Urochloa P. Beauv.	1
Peroxisome inter-organelle cooperation in Drosophila	1
DNA barcoding of the Amazon Continental Shelf ichthyoplankton: fish larvae assemblages inside and outside of the Amazon River plume.	1
Strains of Apis mellifera ligustica honey bees artificially bred for apicultural traits are not consistently differentiated by mitochondrial DNA genome m	1
Differential expression analysis of soybean pod tissue between Canadian environments identifies differences in sulfur-containing amino acid-related gene expression	1
Understanding microchromosomal organization and evolution in four representative woodpeckers (Picidae, Piciformes) through BAC-FISH analysis	1
Sequence-based identification of polyamine oxidase genes in Sorghum bicolor L.	1
Reducing the regulatory burden of plant biotechnology regulations in Canada	1
Expression of defensin genes across house fly (Musca domestica) life history gives insight into immune system subfunctionalization	1
A second gene for resistance to four pathotypes of Plasmodiophora brassicae identified in the Brassica napus cultivar ‘Mendel’	1
Identification and expression analysis of C2H2-zinc finger protein genes reveals their role in stress tolerance in Brassica napus	1
Association mapping identifies stable loci containing novel genes for developmental and reproductive traits in sorghum	1
Classical and molecular cytogenetics of Ponerinae ants reveal evolutionary and taxonomic insights	1
Patterns of genome size evolution versus fraction of repetitive elements in statu nascendi species: the case of the willistoni subgroup of Drosophila (Diptera, Drosophilidae)	1
Identification of the 12-oxophytoeienoic acid reductase (OPR) gene family in pepper (Capsicum annuum L.) and functional characterization of CaOPR6 in pepper fruit development and	1
Identification of full-length genes involved in the biosynthesis of β-caryophyllene and lupeol from the leaf transcriptome of Ayapana triplinervis	1
Uncovering the complexity of structural variants in four individuals with autism spectrum disorder	1
Abundance of distal repetitive DNA sequences in Capsicum L. (Solanaceae) chromosomes	1
Genomics of tropical forage grasses in Brazil: resources, progress, and future directions	1
Genomic regions associated with coat color in Gir cattle	1
Mining and identification of solitary long terminal repeat (Solo-LTR) presence polymorphisms in the sheep genomes	1
Conventional cytogenetics and microsatellite chromosomal distribution in social wasp Mischocyttarus cassununga (Ihering, 1903) (Vespidae, Polistinae, Mischocyttarini)	1
Investigating the expression of fertility-regulating LncRNAs in multiparous and uniparous Shal ewe's ovaries	1
The evolution of genomic organization through chromosomal rearrangements in Arctic charr (Salvelinus alpinus)	1